RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 03-Jun-2021 02:06:45 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/2_msa/Q9Y5P6_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/3_mltree/Q9Y5P6.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/4_raxmlng_ancestral/Q9Y5P6 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622675205 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/2_msa/Q9Y5P6_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 360 sites WARNING: Sequences tr_G1R5D2_G1R5D2_NOMLE_61853 and tr_A0A2I2YRI1_A0A2I2YRI1_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1R5D2_G1R5D2_NOMLE_61853 and tr_A0A2J8TGN6_A0A2J8TGN6_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1R5D2_G1R5D2_NOMLE_61853 and tr_A0A2I3RJT5_A0A2I3RJT5_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1R5D2_G1R5D2_NOMLE_61853 and tr_A0A2R9ATG2_A0A2R9ATG2_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A0E1S0F5_A0A0E1S0F5_COCIM_246410 and tr_A0A0J7AW21_A0A0J7AW21_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6QQ95_B6QQ95_TALMQ_441960 and tr_A0A093V7Q8_A0A093V7Q8_TALMA_1077442 are exactly identical! WARNING: Sequences tr_G2X5U6_G2X5U6_VERDV_498257 and tr_A0A0G4LDJ0_A0A0G4LDJ0_9PEZI_100787 are exactly identical! WARNING: Sequences sp_Q7RVR8_MPG1_NEUCR_367110 and tr_G4V1I1_G4V1I1_NEUT9_510952 are exactly identical! WARNING: Sequences sp_Q295Y7_GMPPB_DROPS_46245 and tr_B4GFI5_B4GFI5_DROPE_7234 are exactly identical! WARNING: Sequences tr_B8N3D7_B8N3D7_ASPFN_332952 and sp_Q2UJU5_MPG1_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8N3D7_B8N3D7_ASPFN_332952 and tr_A0A1S9DLW5_A0A1S9DLW5_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_W7LTG0_W7LTG0_GIBM7_334819 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_A0A0D2XGI7_A0A0D2XGI7_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_S0E7D0_S0E7D0_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_N4TZR0_N4TZR0_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_X0CXQ0_X0CXQ0_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_A0A2H3TFZ5_A0A2H3TFZ5_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_A0A2H3GSG6_A0A2H3GSG6_FUSOX_327505 are exactly identical! WARNING: Sequences tr_F9FRG8_F9FRG8_FUSOF_660025 and tr_A0A365ND07_A0A365ND07_GIBIN_948311 are exactly identical! WARNING: Sequences tr_E9EQL5_E9EQL5_METRA_655844 and tr_A0A0D9P6T5_A0A0D9P6T5_METAN_1291518 are exactly identical! WARNING: Sequences tr_A0A0E0FVP9_A0A0E0FVP9_ORYNI_4536 and tr_A0A0E0N4Y0_A0A0E0N4Y0_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0GKF3_A0A0E0GKF3_ORYNI_4536 and tr_I1P9V5_I1P9V5_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0GKF3_A0A0E0GKF3_ORYNI_4536 and tr_A0A0E0CYJ7_A0A0E0CYJ7_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_A0A0E0GKF3_A0A0E0GKF3_ORYNI_4536 and tr_A0A0D3FGP8_A0A0D3FGP8_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0GKF3_A0A0E0GKF3_ORYNI_4536 and tr_A0A0D9Z566_A0A0D9Z566_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0I8U6_A0A0E0I8U6_ORYNI_4536 and tr_A2YSQ4_A2YSQ4_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0I8U6_A0A0E0I8U6_ORYNI_4536 and tr_I1QGR4_I1QGR4_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0I8U6_A0A0E0I8U6_ORYNI_4536 and sp_Q6Z9A3_GMPP3_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A2QIW7_A2QIW7_ASPNC_425011 and tr_G7X7Z0_G7X7Z0_ASPKW_1033177 are exactly identical! WARNING: Sequences tr_A2QIW7_A2QIW7_ASPNC_425011 and tr_G3Y9A2_G3Y9A2_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2QIW7_A2QIW7_ASPNC_425011 and tr_A0A100IAY3_A0A100IAY3_ASPNG_5061 are exactly identical! WARNING: Sequences tr_A2QIW7_A2QIW7_ASPNC_425011 and tr_A0A1L9MVV2_A0A1L9MVV2_ASPTU_767770 are exactly identical! WARNING: Sequences tr_A2QIW7_A2QIW7_ASPNC_425011 and tr_A0A317UVJ0_A0A317UVJ0_9EURO_1448314 are exactly identical! WARNING: Sequences tr_A2QIW7_A2QIW7_ASPNC_425011 and tr_A0A319AGU5_A0A319AGU5_9EURO_1450533 are exactly identical! WARNING: Sequences tr_F7GRF0_F7GRF0_MACMU_9544 and tr_G8F4N3_G8F4N3_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7GRF0_F7GRF0_MACMU_9544 and tr_A0A2K6DGS3_A0A2K6DGS3_MACNE_9545 are exactly identical! WARNING: Sequences tr_E5SZN2_E5SZN2_TRISP_6334 and tr_A0A0V0RS15_A0A0V0RS15_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5SZN2_E5SZN2_TRISP_6334 and tr_A0A0V1CBW0_A0A0V1CBW0_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5SZN2_E5SZN2_TRISP_6334 and tr_A0A0V0UYU4_A0A0V0UYU4_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5SZN2_E5SZN2_TRISP_6334 and tr_A0A0V0ZAY2_A0A0V0ZAY2_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5SZN2_E5SZN2_TRISP_6334 and tr_A0A0V1PGU3_A0A0V1PGU3_9BILA_92180 are exactly identical! WARNING: Sequences tr_F4P2M7_F4P2M7_BATDJ_684364 and tr_A0A177WME7_A0A177WME7_BATDE_403673 are exactly identical! WARNING: Sequences tr_I1NTB3_I1NTB3_ORYGL_4538 and tr_A0A0D3EW78_A0A0D3EW78_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0NSZ9_A0A0E0NSZ9_ORYRU_4529 and sp_Q84JH5_GMPP1_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_F9X786_F9X786_ZYMTI_336722 and tr_A0A1X7RMV4_A0A1X7RMV4_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_G0NYH0_G0NYH0_CAEBE_135651 and tr_G0PHL3_G0PHL3_CAEBE_135651 are exactly identical! WARNING: Sequences tr_G2YI83_G2YI83_BOTF4_999810 and tr_M7UMF3_M7UMF3_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_B3SCS7_B3SCS7_TRIAD_10228 and tr_A0A369S490_A0A369S490_9METZ_287889 are exactly identical! WARNING: Sequences tr_L2FTG5_L2FTG5_COLFN_1213859 and tr_T0KI00_T0KI00_COLGC_1237896 are exactly identical! WARNING: Sequences tr_M4C7H1_M4C7H1_BRARP_51351 and tr_A0A078F2P1_A0A078F2P1_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4C7H1_M4C7H1_BRARP_51351 and tr_A0A078JBH7_A0A078JBH7_BRANA_3708 are exactly identical! WARNING: Sequences tr_R1E2N0_R1E2N0_EMIHU_2903 and tr_R1EZR2_R1EZR2_EMIHU_2903 are exactly identical! WARNING: Sequences tr_M8AUH4_M8AUH4_TRIUA_4572 and tr_A0A3B6EQD2_A0A3B6EQD2_WHEAT_4565 are exactly identical! WARNING: Sequences tr_M2THD4_M2THD4_COCSN_665912 and tr_W6Y7E5_W6Y7E5_COCCA_930089 are exactly identical! WARNING: Sequences tr_M2THD4_M2THD4_COCSN_665912 and tr_W6YXN0_W6YXN0_COCMI_930090 are exactly identical! WARNING: Sequences tr_W2QCI2_W2QCI2_PHYPN_761204 and tr_A0A0W8C097_A0A0W8C097_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2QCI2_W2QCI2_PHYPN_761204 and tr_W2H1Y2_W2H1Y2_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A017S7P3_A0A017S7P3_9EURO_1388766 and tr_A0A1L9V5F4_A0A1L9V5F4_ASPGL_1160497 are exactly identical! WARNING: Sequences tr_A0A059JI11_A0A059JI11_9EURO_1215338 and tr_A0A178F7M8_A0A178F7M8_TRIRU_5551 are exactly identical! WARNING: Sequences tr_A0A2I3LN07_A0A2I3LN07_PAPAN_9555 and tr_A0A0D9RQ23_A0A0D9RQ23_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I3LN07_A0A2I3LN07_PAPAN_9555 and tr_A0A2K5XWZ2_A0A2K5XWZ2_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A094GU82_A0A094GU82_9PEZI_1420912 and tr_A0A1B8GKV2_A0A1B8GKV2_9PEZI_342668 are exactly identical! WARNING: Sequences tr_A0A0F0IBZ4_A0A0F0IBZ4_ASPPU_1403190 and tr_A0A2G7ELZ0_A0A2G7ELZ0_9EURO_656916 are exactly identical! WARNING: Sequences tr_A0A0L9UVW1_A0A0L9UVW1_PHAAN_3914 and tr_A0A1S3UGC1_A0A1S3UGC1_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A0V0X8N2_A0A0V0X8N2_9BILA_92179 and tr_A0A0V1L801_A0A0V1L801_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V1MQ34_A0A0V1MQ34_9BILA_268474 and tr_A0A0V1HN57_A0A0V1HN57_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A101MTA2_A0A101MTA2_9EURO_48697 and tr_A0A1V6NKZ0_A0A1V6NKZ0_9EURO_60169 are exactly identical! WARNING: Sequences sp_Q4I1Y5_MPG1_GIBZE_229533 and tr_A0A2T4GLJ6_A0A2T4GLJ6_FUSCU_5516 are exactly identical! WARNING: Sequences tr_A0A151X4H1_A0A151X4H1_9HYME_64791 and tr_A0A195D813_A0A195D813_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A1S3XNR8_A0A1S3XNR8_TOBAC_4097 and tr_A0A1U7XPM8_A0A1U7XPM8_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S3XXZ8_A0A1S3XXZ8_TOBAC_4097 and tr_A0A1U7UTA8_A0A1U7UTA8_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S3HAC6_A0A1S3HAC6_LINUN_7574 and tr_A0A1S3HAD2_A0A1S3HAD2_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1R3RUG7_A0A1R3RUG7_ASPC5_602072 and tr_A0A317X449_A0A317X449_9EURO_1450535 are exactly identical! WARNING: Sequences tr_A0A1V8U6J6_A0A1V8U6J6_9PEZI_1974281 and tr_A0A1V8TIU2_A0A1V8TIU2_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A2G2ZY63_A0A2G2ZY63_CAPAN_4072 and tr_A0A2G3CT16_A0A2G3CT16_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2U1PR08_A0A2U1PR08_ARTAN_35608 and tr_A0A2U1PVR5_A0A2U1PVR5_ARTAN_35608 are exactly identical! WARNING: Sequences tr_A0A319CGK0_A0A319CGK0_9EURO_1448315 and tr_A0A2V5ICN7_A0A2V5ICN7_9EURO_1450541 are exactly identical! WARNING: Sequences tr_A0A319CGK0_A0A319CGK0_9EURO_1448315 and tr_A0A2V5IEL2_A0A2V5IEL2_9EURO_1450538 are exactly identical! WARNING: Sequences tr_A0A319ERY1_A0A319ERY1_9EURO_1448318 and tr_A0A395GU10_A0A395GU10_9EURO_1448316 are exactly identical! WARNING: Sequences tr_A0A369GYV1_A0A369GYV1_9HYPO_2039875 and tr_A0A369HAZ2_A0A369HAZ2_9HYPO_2039874 are exactly identical! WARNING: Sequences tr_A0A369GYV1_A0A369GYV1_9HYPO_2039875 and tr_A0A367LN52_A0A367LN52_9HYPO_1330021 are exactly identical! WARNING: Duplicate sequences found: 81 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/4_raxmlng_ancestral/Q9Y5P6.raxml.reduced.phy Alignment comprises 1 partitions and 360 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 360 Gaps: 2.86 % Invariant sites: 0.28 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/4_raxmlng_ancestral/Q9Y5P6.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/3_mltree/Q9Y5P6.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 90 / 7200 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -108325.229753 [00:00:00 -108325.229753] Initial branch length optimization [00:00:01 -108119.018600] Model parameter optimization (eps = 0.100000) [00:00:29] Tree #1, final logLikelihood: -107630.689332 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.302096,0.337029) (0.263688,0.481849) (0.272559,1.055919) (0.161656,2.989841) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/4_raxmlng_ancestral/Q9Y5P6.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/4_raxmlng_ancestral/Q9Y5P6.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/4_raxmlng_ancestral/Q9Y5P6.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9Y5P6/4_raxmlng_ancestral/Q9Y5P6.raxml.log Analysis started: 03-Jun-2021 02:06:45 / finished: 03-Jun-2021 02:07:17 Elapsed time: 32.697 seconds Consumed energy: 1.820 Wh