RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 14:12:04 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/2_msa/Q9UNE7_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/3_mltree/Q9UNE7.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/4_raxmlng_ancestral/Q9UNE7 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622805124 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/2_msa/Q9UNE7_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 303 sites WARNING: Sequences sp_Q8VD33_SGTB_MOUSE_10090 and sp_Q80W98_SGTB_RAT_10116 are exactly identical! WARNING: Sequences tr_M3YTI6_M3YTI6_MUSPF_9669 and tr_A0A2Y9KKM7_A0A2Y9KKM7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YWZ0_M3YWZ0_MUSPF_9669 and tr_A0A2U3W4W6_A0A2U3W4W6_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YWZ0_M3YWZ0_MUSPF_9669 and tr_A0A2Y9KMS6_A0A2Y9KMS6_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G1R9S9_G1R9S9_NOMLE_61853 and tr_G7Q032_G7Q032_MACFA_9541 are exactly identical! WARNING: Sequences tr_J3K4F9_J3K4F9_COCIM_246410 and tr_A0A0J6YHD2_A0A0J6YHD2_COCIT_404692 are exactly identical! WARNING: Sequences tr_B2WMR0_B2WMR0_PYRTR_426418 and tr_A0A2W1DRE1_A0A2W1DRE1_9PLEO_45151 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and tr_A0A2J8R1C8_A0A2J8R1C8_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and tr_H2QA80_H2QA80_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and sp_Q9UNE7_CHIP_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and tr_H9FNL3_H9FNL3_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and tr_A0A0D9RIQ2_A0A0D9RIQ2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and tr_A0A2K5LKA4_A0A2K5LKA4_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and tr_A0A2K6C3B7_A0A2K6C3B7_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I2YCX7_A0A2I2YCX7_GORGO_9595 and tr_A0A2R9A0Z8_A0A2R9A0Z8_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3S4B3_G3S4B3_GORGO_9595 and tr_H2PFP8_H2PFP8_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3S4B3_G3S4B3_GORGO_9595 and tr_H2R2X7_H2R2X7_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3S4B3_G3S4B3_GORGO_9595 and sp_Q96EQ0_SGTB_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3S4B3_G3S4B3_GORGO_9595 and tr_A0A2R9BWR2_A0A2R9BWR2_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1SX57_G1SX57_RABIT_9986 and tr_I3N068_I3N068_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G1SX57_G1SX57_RABIT_9986 and tr_A0A1S3F6G1_A0A1S3F6G1_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q29P26_Q29P26_DROPS_46245 and tr_B4G771_B4G771_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A179UVP2_A0A179UVP2_BLAGS_559298 and tr_C5GWQ3_C5GWQ3_AJEDR_559297 are exactly identical! WARNING: Sequences tr_E2RDU2_E2RDU2_CANLF_9615 and tr_M3VYH7_M3VYH7_FELCA_9685 are exactly identical! WARNING: Sequences tr_F9FMD1_F9FMD1_FUSOF_660025 and tr_A0A0D2XWN1_A0A0D2XWN1_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9FMD1_F9FMD1_FUSOF_660025 and tr_X0CMM1_X0CMM1_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9FMD1_F9FMD1_FUSOF_660025 and tr_A0A2H3TJR5_A0A2H3TJR5_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9FMD1_F9FMD1_FUSOF_660025 and tr_A0A2H3HNF4_A0A2H3HNF4_FUSOX_327505 are exactly identical! WARNING: Sequences tr_A0A088A5M4_A0A088A5M4_APIME_7460 and tr_A0A2A3E4R6_A0A2A3E4R6_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NF93_A0A158NF93_ATTCE_12957 and tr_A0A195AVA5_A0A195AVA5_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A0E0GCY2_A0A0E0GCY2_ORYNI_4536 and tr_B8AIT1_B8AIT1_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0H8B7_A0A0E0H8B7_ORYNI_4536 and tr_A0A0E0PGD9_A0A0E0PGD9_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0H8B7_A0A0E0H8B7_ORYNI_4536 and tr_A0A0D9ZT47_A0A0D9ZT47_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0I6J6_A0A0E0I6J6_ORYNI_4536 and tr_A0A0E0AQ40_A0A0E0AQ40_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A2QCB4_A2QCB4_ASPNC_425011 and tr_G3Y281_G3Y281_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2QCB4_A2QCB4_ASPNC_425011 and tr_A0A319C0F7_A0A319C0F7_9EURO_1450533 are exactly identical! WARNING: Sequences tr_G7X5L6_G7X5L6_ASPKW_1033177 and tr_A0A117DVG5_A0A117DVG5_ASPNG_5061 are exactly identical! WARNING: Sequences tr_G7X5L6_G7X5L6_ASPKW_1033177 and tr_A0A146FM70_A0A146FM70_9EURO_1069201 are exactly identical! WARNING: Sequences tr_G7X5L6_G7X5L6_ASPKW_1033177 and tr_A0A317VFX7_A0A317VFX7_9EURO_1448314 are exactly identical! WARNING: Sequences tr_E5S3G7_E5S3G7_TRISP_6334 and tr_A0A0V0ZMK5_A0A0V0ZMK5_9BILA_990121 are exactly identical! WARNING: Sequences tr_B8AG03_B8AG03_ORYSI_39946 and tr_A0A0D9YVM3_A0A0D9YVM3_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_B8AWY7_B8AWY7_ORYSI_39946 and tr_I1PRN8_I1PRN8_ORYGL_4538 are exactly identical! WARNING: Sequences tr_B8BA61_B8BA61_ORYSI_39946 and tr_I1QF37_I1QF37_ORYGL_4538 are exactly identical! WARNING: Sequences tr_B8BA61_B8BA61_ORYSI_39946 and tr_A0A0D3GVQ5_A0A0D3GVQ5_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_I1P2K0_I1P2K0_ORYGL_4538 and tr_A0A0E0NIE4_A0A0E0NIE4_ORYRU_4529 are exactly identical! WARNING: Sequences tr_I1P2K0_I1P2K0_ORYGL_4538 and tr_Q6H660_Q6H660_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_H0YXC6_H0YXC6_TAEGU_59729 and tr_A0A218V971_A0A218V971_9PASE_299123 are exactly identical! WARNING: Sequences tr_F4WDU7_F4WDU7_ACREC_103372 and tr_A0A195DV00_A0A195DV00_9HYME_471704 are exactly identical! WARNING: Sequences tr_F7I0S4_F7I0S4_CALJA_9483 and tr_A0A0D9RTS3_A0A0D9RTS3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7I0S4_F7I0S4_CALJA_9483 and tr_A0A2K5YJR7_A0A2K5YJR7_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1LXL2_G1LXL2_AILME_9646 and tr_A0A384C580_A0A384C580_URSMA_29073 are exactly identical! WARNING: Sequences tr_W2PIN3_W2PIN3_PHYPN_761204 and tr_A0A0W8CI09_A0A0W8CI09_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2PIN3_W2PIN3_PHYPN_761204 and tr_W2K7F5_W2K7F5_PHYPR_4792 are exactly identical! WARNING: Sequences tr_W2PN08_W2PN08_PHYPN_761204 and tr_W2K9P2_W2K9P2_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A3B6QFL1_A0A3B6QFL1_WHEAT_4565 and sp_F8RP11_HSOP_WHEAT_4565 are exactly identical! WARNING: Sequences tr_A0A0D3FAM0_A0A0D3FAM0_9ORYZ_65489 and tr_A0A0D9YYD3_A0A0D9YYD3_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_V4SRM2_V4SRM2_9ROSI_85681 and tr_A0A2H5PEJ4_A0A2H5PEJ4_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A0D2U8E8_A0A0D2U8E8_GOSRA_29730 and tr_A0A1U8P6F3_A0A1U8P6F3_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0F0I315_A0A0F0I315_ASPPU_1403190 and tr_A0A2G7ELC3_A0A2G7ELC3_9EURO_656916 are exactly identical! WARNING: Sequences tr_A0A0K0FYH4_A0A0K0FYH4_STRVS_75913 and tr_A0A0N5B8F0_A0A0N5B8F0_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A2I0M165_A0A2I0M165_COLLI_8932 and tr_A0A1V4L1E2_A0A1V4L1E2_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0V1DC04_A0A0V1DC04_TRIBR_45882 and tr_A0A0V0X0S4_A0A0V0X0S4_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V1DC04_A0A0V1DC04_TRIBR_45882 and tr_A0A0V0TW78_A0A0V0TW78_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3TUW6_A0A1S3TUW6_VIGRR_3916 and tr_A0A3Q0EU18_A0A3Q0EU18_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A226N6B7_A0A226N6B7_CALSU_9009 and tr_A0A226PDP0_A0A226PDP0_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0RNH5_A0A2D0RNH5_ICTPU_7998 and tr_A0A2D0RPU2_A0A2D0RPU2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2G2XX96_A0A2G2XX96_CAPAN_4072 and tr_A0A2G3CSW8_A0A2G3CSW8_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2U4AX37_A0A2U4AX37_TURTR_9739 and tr_A0A2Y9Q424_A0A2Y9Q424_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2Y9Q3G9_A0A2Y9Q3G9_DELLE_9749 and tr_A0A2Y9SLQ7_A0A2Y9SLQ7_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 69 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/4_raxmlng_ancestral/Q9UNE7.raxml.reduced.phy Alignment comprises 1 partitions and 303 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 303 Gaps: 23.33 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/4_raxmlng_ancestral/Q9UNE7.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/3_mltree/Q9UNE7.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 76 / 6080 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -149214.167287 [00:00:00 -149214.167287] Initial branch length optimization [00:00:00 -148024.465720] Model parameter optimization (eps = 0.100000) [00:00:32] Tree #1, final logLikelihood: -147558.024708 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.162517,0.505544) (0.083079,0.574172) (0.306451,0.677086) (0.447954,1.479272) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/4_raxmlng_ancestral/Q9UNE7.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/4_raxmlng_ancestral/Q9UNE7.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/4_raxmlng_ancestral/Q9UNE7.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q9UNE7/4_raxmlng_ancestral/Q9UNE7.raxml.log Analysis started: 04-Jun-2021 14:12:04 / finished: 04-Jun-2021 14:12:39 Elapsed time: 35.024 seconds