RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 13-Jul-2021 15:23:36 as follows: raxml-ng --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/2_msa/Q9UD57_trimmed_msa.fasta --data-type AA --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/3_mltree/Q9UD57 --seed 2 --threads 1 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), NONE/sequential [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/2_msa/Q9UD57_trimmed_msa.fasta [00:00:00] Loaded alignment with 1000 taxa and 60 sites WARNING: Sequences tr_E9GJ92_E9GJ92_DAPPU_6669 and tr_A0A162CY90_A0A162CY90_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E9GVT2_E9GVT2_DAPPU_6669 and tr_A0A164ZXQ7_A0A164ZXQ7_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E9HEP3_E9HEP3_DAPPU_6669 and tr_A0A164R9G5_A0A164R9G5_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_K7IUZ0_K7IUZ0_NASVI_7425 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A088A834_A0A088A834_APIME_7460 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A158NPC9_A0A158NPC9_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_F4X569_F4X569_ACREC_103372 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_E2B7D4_E2B7D4_HARSA_610380 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A026VVG0_A0A026VVG0_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A0L7QRB2_A0A0L7QRB2_9HYME_597456 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A154P9I4_A0A154P9I4_9HYME_178035 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A195BAD9_A0A195BAD9_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A195F376_A0A195F376_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A195D5A7_A0A195D5A7_9HYME_456900 are exactly identical! WARNING: Sequences tr_E2B0I8_E2B0I8_CAMFO_104421 and tr_A0A2A3EQC5_A0A2A3EQC5_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A3B3I5B6_A0A3B3I5B6_ORYLA_8090 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_M4ASX3_M4ASX3_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_I3K0F9_I3K0F9_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_H2TG02_H2TG02_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_H3BYW1_H3BYW1_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_G3Q696_G3Q696_GASAC_69293 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_F6UE28_F6UE28_XENTR_8364 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_H3A5Z2_H3A5Z2_LATCH_7897 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_W5MYN2_W5MYN2_LEPOC_7918 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A087XWM3_A0A087XWM3_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A0P7XT11_A0A0P7XT11_9TELE_113540 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A151P9H9_A0A151P9H9_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A1S3SV72_A0A1S3SV72_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A1L8HT06_A0A1L8HT06_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A2I4CXN2_A0A2I4CXN2_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A060Y830_A0A060Y830_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A218V8R8_A0A218V8R8_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A2D0RGI8_A0A2D0RGI8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A2B4RZK3_A0A2B4RZK3_STYPI_50429 are exactly identical! WARNING: Sequences tr_A0A0R4IEB2_A0A0R4IEB2_DANRE_7955 and tr_A0A2U9CAC3_A0A2U9CAC3_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A9JRV5_A9JRV5_DANRE_7955 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1D5PMT7_A0A1D5PMT7_CHICK_9031 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and sp_P63157_BARH1_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_M3YM78_M3YM78_MUSPF_9669 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A3B3IK57_A0A3B3IK57_ORYLA_8090 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G1RQV8_G1RQV8_NOMLE_61853 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G3QZ20_G3QZ20_GORGO_9595 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_C3Z546_C3Z546_BRAFL_7739 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_H2PTS1_H2PTS1_PONAB_9601 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G1TRU2_G1TRU2_RABIT_9986 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_E2QSL9_E2QSL9_CANLF_9615 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2J8NAK0_A0A2J8NAK0_PANTR_9598 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_F6PNM9_F6PNM9_MONDO_13616 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_F6W4G4_F6W4G4_HORSE_9796 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_W5P7K8_W5P7K8_SHEEP_9940 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and sp_P63156_BARH1_RAT_10116 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A3B5QV28_A0A3B5QV28_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_I3K5I0_I3K5I0_ORENI_8128 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_I3NBW7_I3NBW7_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_H0WP37_H0WP37_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_H2SM41_H2SM41_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_H0W932_H0W932_CAVPO_10141 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and sp_Q9BZE3_BARH1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G5AT43_G5AT43_HETGA_10181 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_K7FGL4_K7FGL4_PELSI_13735 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G3Q275_G3Q275_GASAC_69293 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G3TF12_G3TF12_LOXAF_9785 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G3X3G7_G3X3G7_SARHA_9305 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_F7E2R4_F7E2R4_XENTR_8364 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_F6U1C3_F6U1C3_CALJA_9483 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_F1S0T9_F1S0T9_PIG_9823 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_H3ADE4_H3ADE4_LATCH_7897 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G1LBR3_G1LBR3_AILME_9646 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_G7PRA3_G7PRA3_MACFA_9541 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_E1B9T6_E1B9T6_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_L5K7G5_L5K7G5_PTEAL_9402 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_M3W741_M3W741_FELCA_9685 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_U3JFH5_U3JFH5_FICAL_59894 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A3B1JQH2_A0A3B1JQH2_ASTMX_7994 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A087XD99_A0A087XD99_POEFO_48698 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A096P0E1_A0A096P0E1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A0D9RR12_A0A0D9RR12_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A0Q3X9B7_A0A0Q3X9B7_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A091GMS9_A0A091GMS9_9AVES_55661 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2I0M3K0_A0A2I0M3K0_COLLI_8932 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A091HS67_A0A091HS67_CALAN_9244 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1S3A1Q4_A0A1S3A1Q4_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1S3FL46_A0A1S3FL46_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1S3KZF1_A0A1S3KZF1_SALSA_8030 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_C0H9N9_C0H9N9_SALSA_8030 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1L8F6A7_A0A1L8F6A7_XENLA_8355 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1U7U5I0_A0A1U7U5I0_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1U8CWE9_A0A1U8CWE9_MESAU_10036 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A1V4J675_A0A1V4J675_PATFA_372326 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2I4AIF5_A0A2I4AIF5_9TELE_52670 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A060WWJ8_A0A060WWJ8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A060Z6T2_A0A060Z6T2_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A218V661_A0A218V661_9PASE_299123 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A226NNY5_A0A226NNY5_CALSU_9009 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A226P0E4_A0A226P0E4_COLVI_9014 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2D0PR80_A0A2D0PR80_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2D0SXY2_A0A2D0SXY2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2K5LG79_A0A2K5LG79_CERAT_9531 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2K6E700_A0A2K6E700_MACNE_9545 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2K5XR01_A0A2K5XR01_MANLE_9568 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2R9AHX1_A0A2R9AHX1_PANPA_9597 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2U4A555_A0A2U4A555_TURTR_9739 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2U3VD22_A0A2U3VD22_ODORO_9708 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2U3YK34_A0A2U3YK34_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2U9CER2_A0A2U9CER2_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2Y9DJN5_A0A2Y9DJN5_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2Y9JDE4_A0A2Y9JDE4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2Y9NJ17_A0A2Y9NJ17_DELLE_9749 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A2Y9S9V3_A0A2Y9S9V3_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A2CEG4_A2CEG4_DANRE_7955 and tr_A0A384B672_A0A384B672_BALAS_310752 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_F1RCJ6_F1RCJ6_DANRE_7955 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_F1NVN6_F1NVN6_CHICK_9031 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_H2LFF9_H2LFF9_ORYLA_8090 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A3B5PRW0_A0A3B5PRW0_XIPMA_8083 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_M3ZI33_M3ZI33_XIPMA_8083 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_I3J5U3_I3J5U3_ORENI_8128 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_I3J9E3_I3J9E3_ORENI_8128 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A3B5KGW3_A0A3B5KGW3_TAKRU_31033 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_H2SBX0_H2SBX0_TAKRU_31033 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_H3CVS0_H3CVS0_TETNG_99883 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_H3DI30_H3DI30_TETNG_99883 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_G3PQV5_G3PQV5_GASAC_69293 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_H0Z5L1_H0Z5L1_TAEGU_59729 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_H3B5M0_H3B5M0_LATCH_7897 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_U3JNJ3_U3JNJ3_FICAL_59894 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_W5KDY8_W5KDY8_ASTMX_7994 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_W5KN16_W5KN16_ASTMX_7994 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_W5MYG2_W5MYG2_LEPOC_7918 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A0P7WDS2_A0A0P7WDS2_9TELE_113540 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A0Q3MPI1_A0A0Q3MPI1_AMAAE_12930 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A091JPD0_A0A091JPD0_EGRGA_188379 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A091UUR7_A0A091UUR7_NIPNI_128390 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A087QTS2_A0A087QTS2_APTFO_9233 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A099Z7N1_A0A099Z7N1_TINGU_94827 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A091FL57_A0A091FL57_9AVES_55661 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A099ZX63_A0A099ZX63_CHAVO_50402 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A2I0LIU3_A0A2I0LIU3_COLLI_8932 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A093FZS4_A0A093FZS4_DRYPU_118200 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A091IUJ6_A0A091IUJ6_CALAN_9244 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A1S3MYL0_A0A1S3MYL0_SALSA_8030 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A1V4K6D2_A0A1V4K6D2_PATFA_372326 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A060Z613_A0A060Z613_ONCMY_8022 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A218VCH3_A0A218VCH3_9PASE_299123 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A226NP63_A0A226NP63_CALSU_9009 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A226PBH7_A0A226PBH7_COLVI_9014 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A2D0R3S3_A0A2D0R3S3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A2U9BBV6_A0A2U9BBV6_SCOMX_52904 are exactly identical! WARNING: Sequences tr_B3DHA2_B3DHA2_DANRE_7955 and tr_A0A2U9C8D4_A0A2U9C8D4_SCOMX_52904 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and sp_P19601_SAX1_CHICK_9031 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and sp_P42580_NKX12_MOUSE_10090 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_M3XUG3_M3XUG3_MUSPF_9669 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2I2Y9J9_A0A2I2Y9J9_GORGO_9595 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_G1KVY8_G1KVY8_ANOCA_28377 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_J9P9C4_J9P9C4_CANLF_9615 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2I3RDH0_A0A2I3RDH0_PANTR_9598 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_D3Z9E2_D3Z9E2_RAT_10116 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_M4AYI3_M4AYI3_XIPMA_8083 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_I3IVN1_I3IVN1_ORENI_8128 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and sp_Q9UD57_NKX12_HUMAN_9606 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_G5BZ31_G5BZ31_HETGA_10181 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2R8MMY5_A0A2R8MMY5_CALJA_9483 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_F1SDP4_F1SDP4_PIG_9823 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A337S4V6_A0A337S4V6_FELCA_9685 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_W5MN62_W5MN62_LEPOC_7918 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A087YIW2_A0A087YIW2_POEFO_48698 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A096NU56_A0A096NU56_PAPAN_9555 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A0D9QWX4_A0A0D9QWX4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A0P7ULD6_A0A0P7ULD6_9TELE_113540 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A1U7QBU8_A0A1U7QBU8_MESAU_10036 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2I4AP01_A0A2I4AP01_9TELE_52670 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2K5P363_A0A2K5P363_CERAT_9531 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2K6CRZ2_A0A2K6CRZ2_MACNE_9545 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2U3V6Q2_A0A2U3V6Q2_TURTR_9739 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2U9CG39_A0A2U9CG39_SCOMX_52904 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2Y9JAP4_A0A2Y9JAP4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2Y9MS58_A0A2Y9MS58_DELLE_9749 are exactly identical! WARNING: Sequences tr_B8A4P8_B8A4P8_DANRE_7955 and tr_A0A2Y9SE69_A0A2Y9SE69_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q1LU90_Q1LU90_DANRE_7955 and tr_H3CHD8_H3CHD8_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q1LU90_Q1LU90_DANRE_7955 and tr_A0A1S3M429_A0A1S3M429_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q1LU90_Q1LU90_DANRE_7955 and tr_A0A1S3Q1Z4_A0A1S3Q1Z4_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q1LU90_Q1LU90_DANRE_7955 and tr_A0A060XS79_A0A060XS79_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A1D5PUD4_A0A1D5PUD4_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and sp_Q9QZW9_MNX1_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_M3YED9_M3YED9_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H2M463_H2M463_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G1P4S9_G1P4S9_MYOLU_59463 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G3I7R6_G3I7R6_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G3QRK6_G3QRK6_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H2PP60_H2PP60_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G1N0I6_G1N0I6_MELGA_9103 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G1KKZ5_G1KKZ5_ANOCA_28377 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G1TAS3_G1TAS3_RABIT_9986 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_E2RDA2_E2RDA2_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H2R4U3_H2R4U3_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_F6PLT2_F6PLT2_ORNAN_9258 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_F6XG12_F6XG12_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_M0R6D8_M0R6D8_RAT_10116 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A3B5QSB2_A0A3B5QSB2_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_I3JF69_I3JF69_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H0XQM4_H0XQM4_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H2TLT4_H2TLT4_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H0VZ65_H0VZ65_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and sp_P50219_MNX1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G5C8R9_G5C8R9_HETGA_10181 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H3D5G8_H3D5G8_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G3NIJ7_G3NIJ7_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G3TZE9_G3TZE9_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_G3X0V5_G3X0V5_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H0YR11_H0YR11_TAEGU_59729 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_F6TM16_F6TM16_XENTR_8364 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2R8N5R2_A0A2R8N5R2_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_F1SHV7_F1SHV7_PIG_9823 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_H3AWS7_H3AWS7_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_D2HRW9_D2HRW9_AILME_9646 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_L5L708_L5L708_PTEAL_9402 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A337SDQ9_A0A337SDQ9_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_U3JWQ3_U3JWQ3_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_W5N3W1_W5N3W1_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A087YCW0_A0A087YCW0_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2I3MI76_A0A2I3MI76_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A091E3M7_A0A091E3M7_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A0D9R288_A0A0D9R288_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A0P7XC73_A0A0P7XC73_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A151PCW9_A0A151PCW9_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A0Q3M437_A0A0Q3M437_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A091EHG0_A0A091EHG0_CORBR_85066 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A091FUR1_A0A091FUR1_9AVES_55661 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2I0MRN0_A0A2I0MRN0_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A093IGR2_A0A093IGR2_DRYPU_118200 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A091I239_A0A091I239_CALAN_9244 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A1S3AQ50_A0A1S3AQ50_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A1S3NCV0_A0A1S3NCV0_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A1S3Q838_A0A1S3Q838_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_Q32NJ8_Q32NJ8_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A1U7R2B7_A0A1U7R2B7_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A1V4KLI2_A0A1V4KLI2_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2I4BM37_A0A2I4BM37_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A060VM97_A0A060VM97_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A060VUE2_A0A060VUE2_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A218UTK4_A0A218UTK4_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A226N934_A0A226N934_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A226P0X7_A0A226P0X7_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2K5LRD9_A0A2K5LRD9_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2K6C4L9_A0A2K6C4L9_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2R8ZKB6_A0A2R8ZKB6_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2U4AXX1_A0A2U4AXX1_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2U3W5Y7_A0A2U3W5Y7_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2U3Z5W6_A0A2U3Z5W6_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2U9CX06_A0A2U9CX06_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2Y9KDJ2_A0A2Y9KDJ2_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2Y9PNC3_A0A2Y9PNC3_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A2Y9TC86_A0A2Y9TC86_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A384BWC2_A0A384BWC2_URSMA_29073 are exactly identical! WARNING: Sequences tr_Q6SYZ1_Q6SYZ1_DANRE_7955 and tr_A0A383YRR1_A0A383YRR1_BALAS_310752 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A1D5PW02_A0A1D5PW02_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and sp_Q8VIB5_BARH2_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_M3XZU0_M3XZU0_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G1RH20_G1RH20_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G3I0Y5_G3I0Y5_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G3R0I4_G3R0I4_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_H2N6T3_H2N6T3_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G1SLB0_G1SLB0_RABIT_9986 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F1PIC9_F1PIC9_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_H2PZD7_H2PZD7_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F7G140_F7G140_ORNAN_9258 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F6RUK8_F6RUK8_HORSE_9796 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_W5Q267_W5Q267_SHEEP_9940 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and sp_O88181_BARH2_RAT_10116 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_I3MWD3_I3MWD3_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_H0X421_H0X421_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_H0W344_H0W344_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and sp_Q9NY43_BARH2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F6SLN6_F6SLN6_MACMU_9544 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G5BLC2_G5BLC2_HETGA_10181 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_K7F384_K7F384_PELSI_13735 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G3SUC2_G3SUC2_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G3WV21_G3WV21_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_H0Z716_H0Z716_TAEGU_59729 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F7ES22_F7ES22_XENTR_8364 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F7CVL1_F7CVL1_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F1S4E7_F1S4E7_PIG_9823 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_H3B1W8_H3B1W8_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G1LPY4_G1LPY4_AILME_9646 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_G7NTN0_G7NTN0_MACFA_9541 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_F1N4U7_F1N4U7_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_L5K450_L5K450_PTEAL_9402 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_M3X0Z3_M3X0Z3_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_U3JGH4_U3JGH4_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A3B1JSK7_A0A3B1JSK7_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_W5MC85_W5MC85_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A096MND3_A0A096MND3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A091CM54_A0A091CM54_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A0D9S6S8_A0A0D9S6S8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A151M539_A0A151M539_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A0Q3MID6_A0A0Q3MID6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A1S2ZUH0_A0A1S2ZUH0_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A1S3FCN3_A0A1S3FCN3_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A1S3KIJ2_A0A1S3KIJ2_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A1S3PAJ0_A0A1S3PAJ0_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_B7ZRB9_B7ZRB9_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A1U7TS02_A0A1U7TS02_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A1U7QYM0_A0A1U7QYM0_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A060WHX8_A0A060WHX8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A060XNK1_A0A060XNK1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A218VEN0_A0A218VEN0_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A226MHL4_A0A226MHL4_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A226PN76_A0A226PN76_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2D0RY51_A0A2D0RY51_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2K5NIZ9_A0A2K5NIZ9_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2K6DCN4_A0A2K6DCN4_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2K5YJ88_A0A2K5YJ88_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2R9B1X9_A0A2R9B1X9_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2U3V4K3_A0A2U3V4K3_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2U3W3J0_A0A2U3W3J0_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2U3YB90_A0A2U3YB90_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2Y9DQ22_A0A2Y9DQ22_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2Y9J0K4_A0A2Y9J0K4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2Y9LPU6_A0A2Y9LPU6_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A2Y9EMN4_A0A2Y9EMN4_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A384C1W6_A0A384C1W6_URSMA_29073 are exactly identical! WARNING: Sequences tr_Q6YI96_Q6YI96_DANRE_7955 and tr_A0A383ZNC1_A0A383ZNC1_BALAS_310752 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_F1NF97_F1NF97_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and sp_P48031_GBX2_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A3B3HFT4_A0A3B3HFT4_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G1RI92_G1RI92_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G1PIC7_G1PIC7_MYOLU_59463 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G3IFH5_G3IFH5_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G3QRY5_G3QRY5_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_H2P908_H2P908_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G1T4M0_G1T4M0_RABIT_9986 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_E2RC01_E2RC01_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_H2QJN8_H2QJN8_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_F6UCN7_F6UCN7_ORNAN_9258 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_F7GJL0_F7GJL0_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_F7E252_F7E252_HORSE_9796 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_W5QCV0_W5QCV0_SHEEP_9940 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G3V8J6_G3V8J6_RAT_10116 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_I3MFW9_I3MFW9_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_H0XU42_H0XU42_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_H0VVC0_H0VVC0_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and sp_P52951_GBX2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G5AY44_G5AY44_HETGA_10181 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_K7GIZ2_K7GIZ2_PELSI_13735 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G3T3W8_G3T3W8_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G3VCV3_G3VCV3_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_F7AA25_F7AA25_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_F1SM11_F1SM11_PIG_9823 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_G1L4R1_G1L4R1_AILME_9646 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_E1BJ47_E1BJ47_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_L5KU72_L5KU72_PTEAL_9402 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2I2UQ41_A0A2I2UQ41_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_U3KL54_U3KL54_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_U3I1W2_U3I1W2_ANAPL_8839 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_W5KQB5_W5KQB5_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_W5MBK2_W5MBK2_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A096N887_A0A096N887_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A091DPP6_A0A091DPP6_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A0D9R1N1_A0A0D9R1N1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A0P7W922_A0A0P7W922_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A151N9V4_A0A151N9V4_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A0Q3PBS2_A0A0Q3PBS2_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2I0MIM3_A0A2I0MIM3_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A1S3MXV7_A0A1S3MXV7_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A1U7S079_A0A1U7S079_ALLSI_38654 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A1U7QMR2_A0A1U7QMR2_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A060YXD3_A0A060YXD3_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A226N257_A0A226N257_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2D0S1C9_A0A2D0S1C9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2K5M8U4_A0A2K5M8U4_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2K6CRE5_A0A2K6CRE5_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2U3V6E9_A0A2U3V6E9_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2U3X527_A0A2U3X527_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2U3Z242_A0A2U3Z242_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2Y9E3I9_A0A2Y9E3I9_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2Y9J7K4_A0A2Y9J7K4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2Y9MXJ4_A0A2Y9MXJ4_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A2Y9EZ26_A0A2Y9EZ26_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q8QGU1_Q8QGU1_DANRE_7955 and tr_A0A384ACE3_A0A384ACE3_BALAS_310752 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_Q9DEB1_Q9DEB1_CHICK_9031 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_G1QW66_G1QW66_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_G3HB64_G3HB64_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_G3RL75_G3RL75_GORGO_9595 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_H2PP28_H2PP28_PONAB_9601 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_F6T3S9_F6T3S9_MONDO_13616 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_F6T904_F6T904_HORSE_9796 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_I3NA07_I3NA07_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_H0VIZ4_H0VIZ4_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_G5AMT5_G5AMT5_HETGA_10181 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_K7G6D2_K7G6D2_PELSI_13735 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_F6ZV56_F6ZV56_CALJA_9483 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_G1M4H6_G1M4H6_AILME_9646 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_G7P220_G7P220_MACFA_9541 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_L5K331_L5K331_PTEAL_9402 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A3B1IVR5_A0A3B1IVR5_ASTMX_7994 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A091DXV3_A0A091DXV3_FUKDA_885580 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A0D9R2X7_A0A0D9R2X7_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A151MTT1_A0A151MTT1_ALLMI_8496 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A0Q3RBY1_A0A0Q3RBY1_AMAAE_12930 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2I0LJH4_A0A2I0LJH4_COLLI_8932 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A1S3G3Q1_A0A1S3G3Q1_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A3Q0DIJ0_A0A3Q0DIJ0_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A1U7R4F0_A0A1U7R4F0_MESAU_10036 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2D0QMB5_A0A2D0QMB5_ICTPU_7998 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2K5X9T5_A0A2K5X9T5_MANLE_9568 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2R9BN08_A0A2R9BN08_PANPA_9597 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2U4AXX0_A0A2U4AXX0_TURTR_9739 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2U3XHJ8_A0A2U3XHJ8_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2U9BJU8_A0A2U9BJU8_SCOMX_52904 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2Y9K9Y0_A0A2Y9K9Y0_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2Y9NKC7_A0A2Y9NKC7_DELLE_9749 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A2Y9T080_A0A2Y9T080_PHYCD_9755 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A384BWD7_A0A384BWD7_URSMA_29073 are exactly identical! WARNING: Sequences sp_P15142_HM7X_CHICK_9031 and tr_A0A383YRQ1_A0A383YRQ1_BALAS_310752 are exactly identical! WARNING: Sequences tr_Q91967_Q91967_CHICK_9031 and tr_G1NKR2_G1NKR2_MELGA_9103 are exactly identical! WARNING: Sequences tr_Q91967_Q91967_CHICK_9031 and tr_A0A226P705_A0A226P705_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and sp_O08686_BARX2_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_M3YBA9_M3YBA9_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G1R7D5_G1R7D5_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G1NST4_G1NST4_MYOLU_59463 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G3RH91_G3RH91_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_H2NFV4_H2NFV4_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G1MQP7_G1MQP7_MELGA_9103 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_H9GMZ5_H9GMZ5_ANOCA_28377 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_J9P0C1_J9P0C1_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_H2Q542_H2Q542_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_F6T8B5_F6T8B5_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_F7CBI3_F7CBI3_HORSE_9796 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_D4A7E7_D4A7E7_RAT_10116 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A3B5R1T9_A0A3B5R1T9_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_I3JD09_I3JD09_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_I3MW30_I3MW30_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_H0X196_H0X196_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_H0VIU1_H0VIU1_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and sp_Q9UMQ3_BARX2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G5BRN2_G5BRN2_HETGA_10181 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_K7F6T6_K7F6T6_PELSI_13735 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G3NTU7_G3NTU7_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G3SX45_G3SX45_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G3VXN4_G3VXN4_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_F7ALP0_F7ALP0_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A287AJ07_A0A287AJ07_PIG_9823 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G7PPP4_G7PPP4_MACFA_9541 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_G5E5Q0_G5E5Q0_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_M3VZB6_M3VZB6_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_U3I880_U3I880_ANAPL_8839 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A3B1IYN0_A0A3B1IYN0_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A087X8M0_A0A087X8M0_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A096NDG7_A0A096NDG7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A091CID3_A0A091CID3_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A0D9S4N5_A0A0D9S4N5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A151NG02_A0A151NG02_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A091WK84_A0A091WK84_NIPNI_128390 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A091GIU5_A0A091GIU5_9AVES_55661 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2I0LVG0_A0A2I0LVG0_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A091I8F9_A0A091I8F9_CALAN_9244 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A1S3AS51_A0A1S3AS51_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A1S3EMC0_A0A1S3EMC0_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A1S3T0T2_A0A1S3T0T2_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A1U7TWP8_A0A1U7TWP8_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A3Q0HC45_A0A3Q0HC45_ALLSI_38654 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A1V4J7I6_A0A1V4J7I6_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2I4BS45_A0A2I4BS45_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A060XGJ9_A0A060XGJ9_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A060YYA5_A0A060YYA5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A226MEG4_A0A226MEG4_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A226PML7_A0A226PML7_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2D0QUX5_A0A2D0QUX5_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2K5NU13_A0A2K5NU13_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2K6AR14_A0A2K6AR14_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2R9A129_A0A2R9A129_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2U3WS04_A0A2U3WS04_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2U3Z4J2_A0A2U3Z4J2_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2U9B637_A0A2U9B637_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A2Y9K5W2_A0A2Y9K5W2_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q9W694_Q9W694_CHICK_9031 and tr_A0A384BVE4_A0A384BVE4_URSMA_29073 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_B4JTU0_B4JTU0_DROGR_7222 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_B0XIK1_B0XIK1_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_H9JMT0_H9JMT0_BOMMO_7091 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_Q7QFH4_Q7QFH4_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A212EIS1_A0A212EIS1_DANPL_278856 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_B4NI20_B4NI20_DROWI_7260 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_B3LVD3_B3LVD3_DROAN_7217 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_Q16J89_Q16J89_AEDAE_7159 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A084VQC1_A0A084VQC1_ANOSI_74873 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A0L7KVT2_A0A0L7KVT2_9NEOP_104452 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A194RQM1_A0A194RQM1_PAPMA_76193 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A0N0P9W2_A0A0N0P9W2_PAPXU_66420 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A0M4ELS5_A0A0M4ELS5_DROBS_30019 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A1J1J670_A0A1J1J670_9DIPT_568069 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A1W4VYF9_A0A1W4VYF9_DROFC_30025 are exactly identical! WARNING: Sequences tr_W5JTG8_W5JTG8_ANODA_43151 and tr_A0A2A4IX86_A0A2A4IX86_HELVI_7102 are exactly identical! WARNING: Sequences tr_W5JU16_W5JU16_ANODA_43151 and tr_A0A084VXK1_A0A084VXK1_ANOSI_74873 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_B4JNI9_B4JNI9_DROGR_7222 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_B4IGH6_B4IGH6_DROSE_7238 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_B5DKY5_B5DKY5_DROPS_46245 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_B4NDU3_B4NDU3_DROWI_7260 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_B3MRZ8_B3MRZ8_DROAN_7217 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_B4HBI8_B4HBI8_DROPE_7234 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_A0A0L0BNP0_A0A0L0BNP0_LUCCU_7375 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_A0A0M4ESZ7_A0A0M4ESZ7_DROBS_30019 are exactly identical! WARNING: Sequences tr_Q9VYL0_Q9VYL0_DROME_7227 and tr_A0A1W4V178_A0A1W4V178_DROFC_30025 are exactly identical! WARNING: Sequences tr_A0A3B3I8Q5_A0A3B3I8Q5_ORYLA_8090 and tr_A0A2I4AQC5_A0A2I4AQC5_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_A0A3B5R453_A0A3B5R453_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_I3KSZ2_I3KSZ2_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_H2U6L0_H2U6L0_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_H3D8C0_H3D8C0_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_G3NK68_G3NK68_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_A0A087YG27_A0A087YG27_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_A0A2I4CGJ2_A0A2I4CGJ2_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2LAD5_H2LAD5_ORYLA_8090 and tr_A0A2U9C4F5_A0A2U9C4F5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2LLY5_H2LLY5_ORYLA_8090 and tr_H2RS02_H2RS02_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2LLY5_H2LLY5_ORYLA_8090 and tr_H3C325_H3C325_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2M0P6_H2M0P6_ORYLA_8090 and sp_Q90XN9_HMX3B_ORYLA_8090 are exactly identical! WARNING: Sequences tr_H2M0P6_H2M0P6_ORYLA_8090 and tr_A0A3B5PT68_A0A3B5PT68_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2M0P6_H2M0P6_ORYLA_8090 and tr_A0A087Y0A7_A0A087Y0A7_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2M0P6_H2M0P6_ORYLA_8090 and tr_A0A2I4B425_A0A2I4B425_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q3V618_Q3V618_ORYLA_8090 and tr_I3JG03_I3JG03_ORENI_8128 are exactly identical! WARNING: Sequences tr_G3I5V4_G3I5V4_CRIGR_10029 and tr_H3AUC2_H3AUC2_LATCH_7897 are exactly identical! WARNING: Sequences tr_G3I5V4_G3I5V4_CRIGR_10029 and tr_E0VTJ2_E0VTJ2_PEDHC_121224 are exactly identical! WARNING: Sequences tr_G3I5V4_G3I5V4_CRIGR_10029 and tr_R7UDF2_R7UDF2_CAPTE_283909 are exactly identical! WARNING: Sequences tr_G3I5V4_G3I5V4_CRIGR_10029 and tr_V4AMU9_V4AMU9_LOTGI_225164 are exactly identical! WARNING: Sequences tr_G3I5V4_G3I5V4_CRIGR_10029 and tr_A0A1U7UU10_A0A1U7UU10_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G3I5V4_G3I5V4_CRIGR_10029 and tr_A0A1U8D489_A0A1U8D489_ALLSI_38654 are exactly identical! WARNING: Sequences tr_G3I5V4_G3I5V4_CRIGR_10029 and tr_A0A2U3XRU2_A0A2U3XRU2_LEPWE_9713 are exactly identical! WARNING: Sequences tr_B7PH32_B7PH32_IXOSC_6945 and tr_A0A087T5L8_A0A087T5L8_9ARAC_407821 are exactly identical! WARNING: Sequences tr_B7PH32_B7PH32_IXOSC_6945 and tr_A0A087U488_A0A087U488_9ARAC_407821 are exactly identical! WARNING: Sequences tr_B7PH32_B7PH32_IXOSC_6945 and tr_A0A1V9XXA7_A0A1V9XXA7_9ACAR_418985 are exactly identical! WARNING: Sequences tr_B7PR31_B7PR31_IXOSC_6945 and tr_A0A1V9XKE9_A0A1V9XKE9_9ACAR_418985 are exactly identical! WARNING: Sequences tr_Q297V1_Q297V1_DROPS_46245 and tr_B4G327_B4G327_DROPE_7234 are exactly identical! WARNING: Sequences sp_Q22909_HM30_CAEEL_6239 and tr_E3LCQ5_E3LCQ5_CAERE_31234 are exactly identical! WARNING: Sequences sp_Q22909_HM30_CAEEL_6239 and tr_A0A261CSR2_A0A261CSR2_9PELO_1503980 are exactly identical! WARNING: Sequences sp_Q22910_HM31_CAEEL_6239 and tr_A0A2H2IEG0_A0A2H2IEG0_CAEJA_281687 are exactly identical! WARNING: Sequences sp_Q22910_HM31_CAEEL_6239 and tr_G0M7E4_G0M7E4_CAEBE_135651 are exactly identical! WARNING: Sequences sp_Q22910_HM31_CAEEL_6239 and tr_E3LCQ4_E3LCQ4_CAERE_31234 are exactly identical! WARNING: Sequences sp_Q22910_HM31_CAEEL_6239 and tr_A8XJD1_A8XJD1_CAEBR_6238 are exactly identical! WARNING: Sequences sp_Q22910_HM31_CAEEL_6239 and tr_A0A1I7UAL0_A0A1I7UAL0_9PELO_1561998 are exactly identical! WARNING: Sequences sp_Q22910_HM31_CAEEL_6239 and tr_A0A261CT28_A0A261CT28_9PELO_1503980 are exactly identical! WARNING: Sequences sp_Q22910_HM31_CAEEL_6239 and tr_A0A2G5SRK0_A0A2G5SRK0_9PELO_1611254 are exactly identical! WARNING: Sequences tr_K7E8F4_K7E8F4_ORNAN_9258 and tr_A0A1S3A4N1_A0A1S3A4N1_ERIEU_9365 are exactly identical! WARNING: Sequences tr_K7E8F4_K7E8F4_ORNAN_9258 and tr_A0A3Q0DP75_A0A3Q0DP75_TARSY_1868482 are exactly identical! WARNING: Sequences tr_B0WX00_B0WX00_CULQU_7176 and tr_B0X769_B0X769_CULQU_7176 are exactly identical! WARNING: Sequences tr_B0WX00_B0WX00_CULQU_7176 and tr_Q7QIK4_Q7QIK4_ANOGA_7165 are exactly identical! WARNING: Sequences tr_B0WX00_B0WX00_CULQU_7176 and tr_B4N5Z6_B4N5Z6_DROWI_7260 are exactly identical! WARNING: Sequences tr_B0WX00_B0WX00_CULQU_7176 and tr_A0A084WKP9_A0A084WKP9_ANOSI_74873 are exactly identical! WARNING: Sequences tr_B0WX00_B0WX00_CULQU_7176 and tr_A0A0L0CA58_A0A0L0CA58_LUCCU_7375 are exactly identical! WARNING: Sequences tr_W5NPH2_W5NPH2_SHEEP_9940 and tr_U3JTH6_U3JTH6_FICAL_59894 are exactly identical! WARNING: Sequences tr_W5NPH2_W5NPH2_SHEEP_9940 and tr_A0A0Q3Q4X4_A0A0Q3Q4X4_AMAAE_12930 are exactly identical! WARNING: Sequences tr_W5NPH2_W5NPH2_SHEEP_9940 and tr_A0A091WK62_A0A091WK62_NIPNI_128390 are exactly identical! WARNING: Sequences tr_W5NPH2_W5NPH2_SHEEP_9940 and tr_A0A1V4J7A0_A0A1V4J7A0_PATFA_372326 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_A0A088AK30_A0A088AK30_APIME_7460 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_A0A158P2T7_A0A158P2T7_ATTCE_12957 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_F4W5V4_F4W5V4_ACREC_103372 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_E2BTC8_E2BTC8_HARSA_610380 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_A0A0M9A9B2_A0A0M9A9B2_9HYME_166423 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_A0A0L7R528_A0A0L7R528_9HYME_597456 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_A0A151XI79_A0A151XI79_9HYME_64791 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_A0A154PI27_A0A154PI27_9HYME_178035 are exactly identical! WARNING: Sequences tr_K7IRB5_K7IRB5_NASVI_7425 and tr_A0A195DGP5_A0A195DGP5_9HYME_471704 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A287D5U2_A0A287D5U2_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_H0XHC5_H0XHC5_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A286X966_A0A286X966_CAVPO_10141 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_G5BCJ2_G5BCJ2_HETGA_10181 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_G3U1P0_G3U1P0_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A287AA71_A0A287AA71_PIG_9823 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A337S518_A0A337S518_FELCA_9685 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A2I3LYB3_A0A2I3LYB3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A091D5G9_A0A091D5G9_FUKDA_885580 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A0D9RSU5_A0A0D9RSU5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A1S3AN28_A0A1S3AN28_ERIEU_9365 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A1U7QBR1_A0A1U7QBR1_MESAU_10036 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A2K5NMU7_A0A2K5NMU7_CERAT_9531 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A2K5YN01_A0A2K5YN01_MANLE_9568 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A2U3VMM3_A0A2U3VMM3_ODORO_9708 are exactly identical! WARNING: Sequences tr_M0R5R8_M0R5R8_RAT_10116 and tr_A0A2Y9JP61_A0A2Y9JP61_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_Q6JJ71_Q6JJ71_STRPU_7668 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_D6X1Q5_D6X1Q5_TRICA_7070 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_J9KUR1_J9KUR1_ACYPI_7029 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_E0VTI9_E0VTI9_PEDHC_121224 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_T1IW52_T1IW52_STRMM_126957 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_T1HA81_T1HA81_RHOPR_13249 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A067R1V4_A0A067R1V4_ZOONE_136037 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_N6SRQ7_N6SRQ7_DENPD_77166 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A0M9AB21_A0A0M9AB21_9HYME_166423 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A0L7RJB0_A0A0L7RJB0_9HYME_597456 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A154PH13_A0A154PH13_9HYME_178035 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A1S3DCZ5_A0A1S3DCZ5_DIACI_121845 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A1D2NFX2_A0A1D2NFX2_ORCCI_48709 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A1W4WS01_A0A1W4WS01_AGRPL_224129 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A2G8K3T3_A0A2G8K3T3_STIJA_307972 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A2G8K3Y1_A0A2G8K3Y1_STIJA_307972 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A2G8K7Z4_A0A2G8K7Z4_STIJA_307972 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A2J7Q429_A0A2J7Q429_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A088AGC4_A0A088AGC4_APIME_7460 and tr_A0A2P8Z7I0_A0A2P8Z7I0_BLAGE_6973 are exactly identical! WARNING: Sequences tr_A0A158NDH1_A0A158NDH1_ATTCE_12957 and tr_A0A026WIV1_A0A026WIV1_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_A0A158NDH1_A0A158NDH1_ATTCE_12957 and tr_A0A151XHA6_A0A151XHA6_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NDH1_A0A158NDH1_ATTCE_12957 and tr_A0A195DJ49_A0A195DJ49_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NDH1_A0A158NDH1_ATTCE_12957 and tr_A0A195B1F7_A0A195B1F7_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NDH1_A0A158NDH1_ATTCE_12957 and tr_A0A195FGX2_A0A195FGX2_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A158NDH1_A0A158NDH1_ATTCE_12957 and tr_A0A195C0M2_A0A195C0M2_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A158P1U3_A0A158P1U3_ATTCE_12957 and tr_F4W6R6_F4W6R6_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158P1U3_A0A158P1U3_ATTCE_12957 and tr_E2BBC1_E2BBC1_HARSA_610380 are exactly identical! WARNING: Sequences tr_A0A158P1U3_A0A158P1U3_ATTCE_12957 and tr_A0A151XAV2_A0A151XAV2_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_D6WRD3_D6WRD3_TRICA_7070 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A026VXR1_A0A026VXR1_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A0M8ZRY6_A0A0M8ZRY6_9HYME_166423 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A151WLC4_A0A151WLC4_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A154PGL5_A0A154PGL5_9HYME_178035 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A151IXM8_A0A151IXM8_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A195B3V8_A0A195B3V8_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A195CTZ2_A0A195CTZ2_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A1W4WY48_A0A1W4WY48_AGRPL_224129 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A2J7QF23_A0A2J7QF23_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A158P4A0_A0A158P4A0_ATTCE_12957 and tr_A0A2A3EA81_A0A2A3EA81_APICC_94128 are exactly identical! WARNING: Sequences tr_I3J6E8_I3J6E8_ORENI_8128 and tr_G3ND93_G3ND93_GASAC_69293 are exactly identical! WARNING: Sequences tr_I3J6E8_I3J6E8_ORENI_8128 and tr_A0A2U9BRA5_A0A2U9BRA5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_I3NFH0_I3NFH0_ICTTR_43179 and tr_G3P5B6_G3P5B6_GASAC_69293 are exactly identical! WARNING: Sequences tr_I3NFH0_I3NFH0_ICTTR_43179 and tr_H3B5X5_H3B5X5_LATCH_7897 are exactly identical! WARNING: Sequences tr_I3NFH0_I3NFH0_ICTTR_43179 and tr_A0A1S3SDA3_A0A1S3SDA3_SALSA_8030 are exactly identical! WARNING: Sequences tr_I3NFH0_I3NFH0_ICTTR_43179 and tr_A0A060W886_A0A060W886_ONCMY_8022 are exactly identical! WARNING: Sequences tr_K1QM31_K1QM31_CRAGI_29159 and tr_A0A0L8IET2_A0A0L8IET2_OCTBM_37653 are exactly identical! WARNING: Sequences tr_K1QM31_K1QM31_CRAGI_29159 and tr_A0A1S3J0F6_A0A1S3J0F6_LINUN_7574 are exactly identical! WARNING: Sequences tr_K1QM31_K1QM31_CRAGI_29159 and tr_A0A210QQH4_A0A210QQH4_MIZYE_6573 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V0S9D0_A0A0V0S9D0_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V1CW42_A0A0V1CW42_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V0X9T3_A0A0V0X9T3_9BILA_92179 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V0V280_A0A0V0V280_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V1LM47_A0A0V1LM47_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V0ZV22_A0A0V0ZV22_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V1N6J5_A0A0V1N6J5_9BILA_268474 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V1PIC0_A0A0V1PIC0_9BILA_92180 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V1HIB2_A0A0V1HIB2_9BILA_268475 are exactly identical! WARNING: Sequences tr_E5S610_E5S610_TRISP_6334 and tr_A0A0V0U2J3_A0A0V0U2J3_9BILA_144512 are exactly identical! WARNING: Sequences tr_E5SE94_E5SE94_TRISP_6334 and tr_E5SEA2_E5SEA2_TRISP_6334 are exactly identical! WARNING: Sequences tr_A0A212F3S7_A0A212F3S7_DANPL_278856 and tr_A0A194QMY5_A0A194QMY5_PAPMA_76193 are exactly identical! WARNING: Sequences tr_D6WAD5_D6WAD5_TRICA_7070 and tr_Q16KT8_Q16KT8_AEDAE_7159 are exactly identical! WARNING: Sequences tr_D6WAD5_D6WAD5_TRICA_7070 and tr_A0A1W4W9U5_A0A1W4W9U5_AGRPL_224129 are exactly identical! WARNING: Sequences tr_D6WAD5_D6WAD5_TRICA_7070 and tr_A0A2J7PIW1_A0A2J7PIW1_9NEOP_105785 are exactly identical! WARNING: Sequences tr_D6WRV8_D6WRV8_TRICA_7070 and tr_N6UC68_N6UC68_DENPD_77166 are exactly identical! WARNING: Sequences tr_G3W7A3_G3W7A3_SARHA_9305 and tr_L5KNQ7_L5KNQ7_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G3W7A3_G3W7A3_SARHA_9305 and tr_A0A3B1KM17_A0A3B1KM17_ASTMX_7994 are exactly identical! WARNING: Sequences tr_G3W7A3_G3W7A3_SARHA_9305 and tr_A0A091D3M6_A0A091D3M6_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G3W7A3_G3W7A3_SARHA_9305 and tr_A0A151MQD3_A0A151MQD3_ALLMI_8496 are exactly identical! WARNING: Sequences tr_G3W7A3_G3W7A3_SARHA_9305 and tr_A0A1V4KBL6_A0A1V4KBL6_PATFA_372326 are exactly identical! WARNING: Sequences tr_G3W7A3_G3W7A3_SARHA_9305 and tr_A0A226MSV0_A0A226MSV0_CALSU_9009 are exactly identical! WARNING: Sequences tr_H0YQM6_H0YQM6_TAEGU_59729 and tr_U3JQP9_U3JQP9_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0YQM6_H0YQM6_TAEGU_59729 and tr_A0A091EZ69_A0A091EZ69_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0YQM6_H0YQM6_TAEGU_59729 and tr_A0A218UP62_A0A218UP62_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_U3J1W4_U3J1W4_ANAPL_8839 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A091FHQ3_A0A091FHQ3_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A091J8K4_A0A091J8K4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A093QFM8_A0A093QFM8_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A091WVB8_A0A091WVB8_NIPNI_128390 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A093HTG5_A0A093HTG5_STRCA_441894 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A091VFZ6_A0A091VFZ6_OPIHO_30419 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A099Z4T9_A0A099Z4T9_TINGU_94827 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A2I0MMF8_A0A2I0MMF8_COLLI_8932 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A093G348_A0A093G348_DRYPU_118200 are exactly identical! WARNING: Sequences tr_H0ZYT4_H0ZYT4_TAEGU_59729 and tr_A0A091IU94_A0A091IU94_CALAN_9244 are exactly identical! WARNING: Sequences tr_B4N945_B4N945_DROWI_7260 and tr_B3LVF7_B3LVF7_DROAN_7217 are exactly identical! WARNING: Sequences tr_F6XBM0_F6XBM0_XENTR_8364 and tr_A0A1L8FL50_A0A1L8FL50_XENLA_8355 are exactly identical! WARNING: Sequences tr_F6YSV8_F6YSV8_XENTR_8364 and tr_A0A1L8FJ16_A0A1L8FJ16_XENLA_8355 are exactly identical! WARNING: Sequences tr_F7EKX0_F7EKX0_XENTR_8364 and tr_A0A1L8EVP7_A0A1L8EVP7_XENLA_8355 are exactly identical! WARNING: Sequences tr_E3LED8_E3LED8_CAERE_31234 and tr_A0A261CNW8_A0A261CNW8_9PELO_1503980 are exactly identical! WARNING: Sequences tr_E3LED8_E3LED8_CAERE_31234 and tr_A0A2G5ST08_A0A2G5ST08_9PELO_1611254 are exactly identical! WARNING: Sequences sp_A8XJD0_HM30_CAEBR_6238 and tr_A0A1I7UAL1_A0A1I7UAL1_9PELO_1561998 are exactly identical! WARNING: Sequences sp_A8XJD0_HM30_CAEBR_6238 and tr_A0A2G5SRF9_A0A2G5SRF9_9PELO_1611254 are exactly identical! WARNING: Sequences tr_B4M881_B4M881_DROVI_7244 and tr_B4L6K8_B4L6K8_DROMO_7230 are exactly identical! WARNING: Sequences tr_B3SD77_B3SD77_TRIAD_10228 and tr_A0A369RWX0_A0A369RWX0_9METZ_287889 are exactly identical! WARNING: Sequences tr_W5M3B0_W5M3B0_LEPOC_7918 and tr_A0A0P7UTG9_A0A0P7UTG9_9TELE_113540 are exactly identical! WARNING: Sequences tr_A0A0R3WN13_A0A0R3WN13_HYDTA_6205 and tr_A0A0R3WBC1_A0A0R3WBC1_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A0R3X106_A0A0R3X106_HYDTA_6205 and tr_A0A0R3W574_A0A0R3W574_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A151MR01_A0A151MR01_ALLMI_8496 and tr_A0A3Q0GUS8_A0A3Q0GUS8_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0N1I7X3_A0A0N1I7X3_PAPMA_76193 and tr_A0A194PPW0_A0A194PPW0_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A194R4S9_A0A194R4S9_PAPMA_76193 and tr_A0A194PSP6_A0A194PSP6_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A194R4S9_A0A194R4S9_PAPMA_76193 and tr_A0A2A4K830_A0A2A4K830_HELVI_7102 are exactly identical! WARNING: Sequences tr_A0A194QI93_A0A194QI93_PAPXU_66420 and tr_A0A2A4K3L2_A0A2A4K3L2_HELVI_7102 are exactly identical! WARNING: Sequences tr_A0A0V0RV23_A0A0V0RV23_9BILA_6336 and tr_A0A0V0VKK0_A0A0V0VKK0_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RV23_A0A0V0RV23_9BILA_6336 and tr_A0A0V1A023_A0A0V1A023_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0RV23_A0A0V0RV23_9BILA_6336 and tr_A0A0V0XVU8_A0A0V0XVU8_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0RV23_A0A0V0RV23_9BILA_6336 and tr_A0A0V1PHR6_A0A0V1PHR6_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0RV23_A0A0V0RV23_9BILA_6336 and tr_A0A0V1H6P0_A0A0V1H6P0_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0RV23_A0A0V0RV23_9BILA_6336 and tr_A0A0V0TYQ3_A0A0V0TYQ3_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0S8P3_A0A0V0S8P3_9BILA_6336 and tr_A0A0V0XAK9_A0A0V0XAK9_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0S8P3_A0A0V0S8P3_9BILA_6336 and tr_A0A0V1LM10_A0A0V1LM10_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0S8P3_A0A0V0S8P3_9BILA_6336 and tr_A0A0V1EHR3_A0A0V1EHR3_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0S8P3_A0A0V0S8P3_9BILA_6336 and tr_A0A0V1HFY0_A0A0V1HFY0_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V1DF76_A0A0V1DF76_TRIBR_45882 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V0WC09_A0A0V0WC09_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V0W039_A0A0V0W039_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V1LLQ2_A0A0V1LLQ2_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V1A0Z8_A0A0V1A0Z8_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V0Y1Y4_A0A0V0Y1Y4_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V1N134_A0A0V1N134_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V1PFW9_A0A0V1PFW9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V1I349_A0A0V1I349_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0SLV1_A0A0V0SLV1_9BILA_6336 and tr_A0A0V0U7E1_A0A0V0U7E1_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3N430_A0A1S3N430_SALSA_8030 and tr_A0A060VU32_A0A060VU32_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3N5F0_A0A1S3N5F0_SALSA_8030 and tr_A0A060YSQ4_A0A060YSQ4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3PR21_A0A1S3PR21_SALSA_8030 and tr_A0A060YT70_A0A060YT70_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3PRB7_A0A1S3PRB7_SALSA_8030 and tr_A0A060Y8A4_A0A060Y8A4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3RV56_A0A1S3RV56_SALSA_8030 and tr_A0A060X5B6_A0A060X5B6_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A060Z7M9_A0A060Z7M9_ONCMY_8022 and tr_A0A060Z9J1_A0A060Z9J1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A2A4IS74_A0A2A4IS74_HELVI_7102 and tr_A0A2A4IVG3_A0A2A4IVG3_HELVI_7102 are exactly identical! WARNING: Duplicate sequences found: 703 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/3_mltree/Q9UD57.raxml.reduced.phy Alignment comprises 1 partitions and 60 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 60 / 60 Gaps: 0.31 % Invariant sites: 1.67 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/3_mltree/Q9UD57.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 1000 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 60 / 4800 [00:00:00] Data distribution: max. searches per worker: 20 Starting ML tree search with 20 distinct starting trees [00:00:00 -69863.872633] Initial branch length optimization [00:00:02 -54657.665609] Model parameter optimization (eps = 10.000000) [00:00:25 -54083.873145] AUTODETECT spr round 1 (radius: 5) [00:01:46 -28800.191928] AUTODETECT spr round 2 (radius: 10) [00:03:13 -18512.084002] AUTODETECT spr round 3 (radius: 15) [00:04:40 -13258.334294] AUTODETECT spr round 4 (radius: 20) [00:06:16 -10665.844613] AUTODETECT spr round 5 (radius: 25) [00:07:54 -9613.704303] SPR radius for FAST iterations: 25 (autodetect) [00:07:54 -9613.704303] Model parameter optimization (eps = 3.000000) [00:08:16 -9539.082026] FAST spr round 1 (radius: 25) [00:09:33 -7959.126158] FAST spr round 2 (radius: 25) [00:10:44 -7542.312966] FAST spr round 3 (radius: 25) [00:11:55 -7349.195664] FAST spr round 4 (radius: 25) [00:13:09 -6857.812871] FAST spr round 5 (radius: 25) [00:14:24 -6792.433291] FAST spr round 6 (radius: 25) [00:15:37 -6671.224427] FAST spr round 7 (radius: 25) [00:16:50 -6627.421953] FAST spr round 8 (radius: 25) [00:18:01 -6626.670723] FAST spr round 9 (radius: 25) [00:19:12 -6621.082578] FAST spr round 10 (radius: 25) [00:20:22 -6621.082529] Model parameter optimization (eps = 1.000000) [00:20:32 -6618.509968] SLOW spr round 1 (radius: 5) [00:21:44 -6616.528101] SLOW spr round 2 (radius: 5) [00:22:55 -6616.234509] SLOW spr round 3 (radius: 5) [00:24:06 -6615.169457] SLOW spr round 4 (radius: 5) [00:25:16 -6615.163477] SLOW spr round 5 (radius: 10) [00:26:34 -6430.115811] SLOW spr round 6 (radius: 5) [00:27:50 -6395.396163] SLOW spr round 7 (radius: 5) [00:29:01 -6394.818246] SLOW spr round 8 (radius: 5) [00:30:11 -6394.818048] SLOW spr round 9 (radius: 10) [00:31:26 -6394.817975] SLOW spr round 10 (radius: 15) [00:33:04 -6305.594530] SLOW spr round 11 (radius: 5) [00:34:24 -6267.960232] SLOW spr round 12 (radius: 5) [00:35:38 -6262.761732] SLOW spr round 13 (radius: 5) [00:36:48 -6261.361291] SLOW spr round 14 (radius: 5) [00:37:59 -6259.706355] SLOW spr round 15 (radius: 5) [00:39:09 -6259.705491] SLOW spr round 16 (radius: 10) [00:40:26 -6254.006830] SLOW spr round 17 (radius: 5) [00:41:40 -6254.006133] SLOW spr round 18 (radius: 10) [00:42:57 -6254.005751] SLOW spr round 19 (radius: 15) [00:44:32 -6251.318676] SLOW spr round 20 (radius: 5) [00:45:52 -6251.318421] SLOW spr round 21 (radius: 10) [00:47:10 -6251.250796] SLOW spr round 22 (radius: 15) [00:48:42 -6251.250645] SLOW spr round 23 (radius: 20) [00:50:44 -6248.346581] SLOW spr round 24 (radius: 5) [00:52:02 -6248.166149] SLOW spr round 25 (radius: 5) [00:53:13 -6248.166086] SLOW spr round 26 (radius: 10) [00:54:30 -6248.166051] SLOW spr round 27 (radius: 15) [00:56:03 -6248.048508] SLOW spr round 28 (radius: 5) [00:57:22 -6225.831886] SLOW spr round 29 (radius: 5) [00:58:34 -6225.828205] SLOW spr round 30 (radius: 10) [00:59:51 -6200.471693] SLOW spr round 31 (radius: 5) [01:01:07 -6199.346040] SLOW spr round 32 (radius: 5) [01:02:17 -6199.345851] SLOW spr round 33 (radius: 10) [01:03:34 -6198.875649] SLOW spr round 34 (radius: 5) [01:04:47 -6198.865018] SLOW spr round 35 (radius: 10) [01:06:02 -6198.864265] SLOW spr round 36 (radius: 15) [01:07:32 -6198.863946] SLOW spr round 37 (radius: 20) [01:09:29 -6198.672295] SLOW spr round 38 (radius: 5) [01:10:48 -6198.668751] SLOW spr round 39 (radius: 10) [01:12:07 -6198.668469] SLOW spr round 40 (radius: 15) [01:13:36 -6198.668359] SLOW spr round 41 (radius: 20) [01:15:34 -6198.668277] SLOW spr round 42 (radius: 25) [01:17:47 -6198.067030] SLOW spr round 43 (radius: 5) [01:19:06 -6198.066973] SLOW spr round 44 (radius: 10) [01:20:23 -6198.066932] SLOW spr round 45 (radius: 15) [01:21:51 -6198.066899] SLOW spr round 46 (radius: 20) [01:23:47 -6198.066872] SLOW spr round 47 (radius: 25) [01:25:56 -6198.066849] Model parameter optimization (eps = 0.100000) [01:26:11] ML tree search #1, logLikelihood: -6197.280603 [01:26:11 -69543.606974] Initial branch length optimization [01:26:13 -54333.202561] Model parameter optimization (eps = 10.000000) [01:26:39 -53700.962137] AUTODETECT spr round 1 (radius: 5) [01:28:04 -29952.165548] AUTODETECT spr round 2 (radius: 10) [01:29:32 -17984.742879] AUTODETECT spr round 3 (radius: 15) [01:30:59 -12215.983263] AUTODETECT spr round 4 (radius: 20) [01:32:31 -9691.947076] AUTODETECT spr round 5 (radius: 25) [01:34:11 -8992.458112] SPR radius for FAST iterations: 25 (autodetect) [01:34:11 -8992.458112] Model parameter optimization (eps = 3.000000) [01:34:39 -8967.449823] FAST spr round 1 (radius: 25) [01:36:01 -7301.142869] FAST spr round 2 (radius: 25) [01:37:18 -7058.021030] FAST spr round 3 (radius: 25) [01:38:34 -6876.009065] FAST spr round 4 (radius: 25) [01:39:49 -6753.507205] FAST spr round 5 (radius: 25) [01:41:04 -6719.198677] FAST spr round 6 (radius: 25) [01:42:15 -6719.083127] FAST spr round 7 (radius: 25) [01:43:26 -6718.543099] FAST spr round 8 (radius: 25) [01:44:37 -6718.482272] Model parameter optimization (eps = 1.000000) [01:44:56 -6699.085068] SLOW spr round 1 (radius: 5) [01:46:08 -6694.396900] SLOW spr round 2 (radius: 5) [01:47:20 -6693.350643] SLOW spr round 3 (radius: 5) [01:48:30 -6693.349771] SLOW spr round 4 (radius: 10) [01:49:46 -6693.206877] SLOW spr round 5 (radius: 5) [01:51:03 -6689.099827] SLOW spr round 6 (radius: 5) [01:52:14 -6689.099760] SLOW spr round 7 (radius: 10) [01:53:29 -6689.099753] SLOW spr round 8 (radius: 15) [01:55:02 -6673.910132] SLOW spr round 9 (radius: 5) [01:56:21 -6673.585806] SLOW spr round 10 (radius: 5) [01:57:33 -6673.585690] SLOW spr round 11 (radius: 10) [01:58:49 -6673.585681] SLOW spr round 12 (radius: 15) [02:00:24 -6594.219351] SLOW spr round 13 (radius: 5) [02:01:45 -6579.547849] SLOW spr round 14 (radius: 5) [02:02:58 -6578.124672] SLOW spr round 15 (radius: 5) [02:04:09 -6578.123587] SLOW spr round 16 (radius: 10) [02:05:28 -6514.321119] SLOW spr round 17 (radius: 5) [02:06:47 -6486.417078] SLOW spr round 18 (radius: 5) [02:07:59 -6485.154251] SLOW spr round 19 (radius: 5) [02:09:10 -6485.153588] SLOW spr round 20 (radius: 10) [02:10:26 -6485.153463] SLOW spr round 21 (radius: 15) [02:11:54 -6484.600447] SLOW spr round 22 (radius: 5) [02:13:12 -6484.594964] SLOW spr round 23 (radius: 10) [02:14:29 -6484.594539] SLOW spr round 24 (radius: 15) [02:15:56 -6484.594480] SLOW spr round 25 (radius: 20) [02:17:43 -6387.820168] SLOW spr round 26 (radius: 5) [02:19:03 -6358.720596] SLOW spr round 27 (radius: 5) [02:20:17 -6357.571156] SLOW spr round 28 (radius: 5) [02:21:28 -6357.569707] SLOW spr round 29 (radius: 10) [02:22:44 -6357.370726] SLOW spr round 30 (radius: 5) [02:23:57 -6357.370412] SLOW spr round 31 (radius: 10) [02:25:13 -6357.370274] SLOW spr round 32 (radius: 15) [02:26:40 -6357.361479] SLOW spr round 33 (radius: 20) [02:28:28 -6355.619398] SLOW spr round 34 (radius: 5) [02:29:47 -6353.605399] SLOW spr round 35 (radius: 5) [02:30:59 -6353.604846] SLOW spr round 36 (radius: 10) [02:32:14 -6353.604803] SLOW spr round 37 (radius: 15) [02:33:41 -6353.604797] SLOW spr round 38 (radius: 20) [02:35:28 -6351.974142] SLOW spr round 39 (radius: 5) [02:36:47 -6351.277633] SLOW spr round 40 (radius: 5) [02:37:58 -6351.277461] SLOW spr round 41 (radius: 10) [02:39:14 -6351.277426] SLOW spr round 42 (radius: 15) [02:40:41 -6351.277417] SLOW spr round 43 (radius: 20) [02:42:27 -6351.277415] SLOW spr round 44 (radius: 25) [02:44:24 -6299.296819] SLOW spr round 45 (radius: 5) [02:45:49 -6123.731537] SLOW spr round 46 (radius: 5) [02:47:02 -6112.530019] SLOW spr round 47 (radius: 5) [02:48:12 -6112.529585] SLOW spr round 48 (radius: 10) [02:49:27 -6112.529549] SLOW spr round 49 (radius: 15) [02:50:54 -6112.529545] SLOW spr round 50 (radius: 20) [02:52:41 -6112.529544] SLOW spr round 51 (radius: 25) [02:54:39 -6112.529544] Model parameter optimization (eps = 0.100000) [02:54:47] ML tree search #2, logLikelihood: -6112.338746 [02:54:47 -69935.211388] Initial branch length optimization [02:54:49 -54593.470244] Model parameter optimization (eps = 10.000000) [02:55:15 -54098.663956] AUTODETECT spr round 1 (radius: 5) [02:56:38 -28847.408612] AUTODETECT spr round 2 (radius: 10) [02:58:07 -18200.845958] AUTODETECT spr round 3 (radius: 15) [02:59:35 -11795.182442] AUTODETECT spr round 4 (radius: 20) [03:01:17 -9292.787365] AUTODETECT spr round 5 (radius: 25) [03:02:59 -8408.357598] SPR radius for FAST iterations: 25 (autodetect) [03:02:59 -8408.357598] Model parameter optimization (eps = 3.000000) [03:03:14 -8333.963657] FAST spr round 1 (radius: 25) [03:04:34 -6843.098067] FAST spr round 2 (radius: 25) [03:05:48 -6420.121693] FAST spr round 3 (radius: 25) [03:07:03 -6297.491241] FAST spr round 4 (radius: 25) [03:08:16 -6242.412481] FAST spr round 5 (radius: 25) [03:09:30 -6230.777946] FAST spr round 6 (radius: 25) [03:10:44 -6230.777760] Model parameter optimization (eps = 1.000000) [03:10:57 -6228.595854] SLOW spr round 1 (radius: 5) [03:12:11 -6226.603646] SLOW spr round 2 (radius: 5) [03:13:22 -6226.602567] SLOW spr round 3 (radius: 10) [03:14:40 -6226.426125] SLOW spr round 4 (radius: 5) [03:15:56 -6221.215435] SLOW spr round 5 (radius: 5) [03:17:10 -6218.319704] SLOW spr round 6 (radius: 5) [03:18:24 -6217.528923] SLOW spr round 7 (radius: 5) [03:19:36 -6217.525957] SLOW spr round 8 (radius: 10) [03:20:53 -6217.169534] SLOW spr round 9 (radius: 5) [03:22:10 -6216.552852] SLOW spr round 10 (radius: 5) [03:23:22 -6216.551649] SLOW spr round 11 (radius: 10) [03:24:39 -6216.551324] SLOW spr round 12 (radius: 15) [03:26:12 -6176.968368] SLOW spr round 13 (radius: 5) [03:27:35 -6143.811291] SLOW spr round 14 (radius: 5) [03:28:50 -6142.732628] SLOW spr round 15 (radius: 5) [03:30:02 -6142.649711] SLOW spr round 16 (radius: 10) [03:31:19 -6142.649325] SLOW spr round 17 (radius: 15) [03:32:50 -6142.525283] SLOW spr round 18 (radius: 5) [03:34:09 -6142.525021] SLOW spr round 19 (radius: 10) [03:35:27 -6141.466757] SLOW spr round 20 (radius: 5) [03:36:43 -6141.466669] SLOW spr round 21 (radius: 10) [03:38:00 -6141.466601] SLOW spr round 22 (radius: 15) [03:39:31 -6141.466547] SLOW spr round 23 (radius: 20) [03:41:38 -6140.638997] SLOW spr round 24 (radius: 5) [03:42:58 -6140.638965] SLOW spr round 25 (radius: 10) [03:44:16 -6140.465983] SLOW spr round 26 (radius: 5) [03:45:31 -6140.465964] SLOW spr round 27 (radius: 10) [03:46:48 -6140.465948] SLOW spr round 28 (radius: 15) [03:48:18 -6140.465936] SLOW spr round 29 (radius: 20) [03:50:25 -6140.465927] SLOW spr round 30 (radius: 25) [03:52:51 -6140.465917] Model parameter optimization (eps = 0.100000) [03:52:57] ML tree search #3, logLikelihood: -6140.418305 [03:52:57 -69842.153970] Initial branch length optimization [03:52:59 -54693.172302] Model parameter optimization (eps = 10.000000) [03:53:26 -54174.771977] AUTODETECT spr round 1 (radius: 5) [03:54:51 -28501.885009] AUTODETECT spr round 2 (radius: 10) [03:56:20 -17289.988491] AUTODETECT spr round 3 (radius: 15) [03:57:46 -12778.822634] AUTODETECT spr round 4 (radius: 20) [03:59:15 -11178.344136] AUTODETECT spr round 5 (radius: 25) [04:00:53 -9520.882859] SPR radius for FAST iterations: 25 (autodetect) [04:00:53 -9520.882859] Model parameter optimization (eps = 3.000000) [04:01:16 -9435.676412] FAST spr round 1 (radius: 25) [04:02:38 -6974.261375] FAST spr round 2 (radius: 25) [04:03:52 -6513.278286] FAST spr round 3 (radius: 25) [04:05:07 -6358.136476] FAST spr round 4 (radius: 25) [04:06:22 -6290.032842] FAST spr round 5 (radius: 25) [04:07:37 -6272.079801] FAST spr round 6 (radius: 25) [04:08:49 -6258.295625] FAST spr round 7 (radius: 25) [04:10:00 -6258.294128] Model parameter optimization (eps = 1.000000) [04:10:12 -6256.177941] SLOW spr round 1 (radius: 5) [04:11:24 -6255.383106] SLOW spr round 2 (radius: 5) [04:12:35 -6255.359448] SLOW spr round 3 (radius: 10) [04:13:52 -6246.001719] SLOW spr round 4 (radius: 5) [04:15:09 -6226.619158] SLOW spr round 5 (radius: 5) [04:16:20 -6226.619105] SLOW spr round 6 (radius: 10) [04:17:35 -6226.619070] SLOW spr round 7 (radius: 15) [04:19:08 -6196.811446] SLOW spr round 8 (radius: 5) [04:20:27 -6194.121785] SLOW spr round 9 (radius: 5) [04:21:38 -6194.121784] SLOW spr round 10 (radius: 10) [04:22:54 -6194.121784] SLOW spr round 11 (radius: 15) [04:24:24 -6194.121784] SLOW spr round 12 (radius: 20) [04:26:19 -6193.357654] SLOW spr round 13 (radius: 5) [04:27:39 -6188.182480] SLOW spr round 14 (radius: 5) [04:28:52 -6188.182425] SLOW spr round 15 (radius: 10) [04:30:07 -6188.182423] SLOW spr round 16 (radius: 15) [04:31:37 -6188.182420] SLOW spr round 17 (radius: 20) [04:33:34 -6187.216016] SLOW spr round 18 (radius: 5) [04:34:54 -6184.718435] SLOW spr round 19 (radius: 5) [04:36:06 -6184.718067] SLOW spr round 20 (radius: 10) [04:37:22 -6184.718063] SLOW spr round 21 (radius: 15) [04:38:54 -6184.718063] SLOW spr round 22 (radius: 20) [04:40:56 -6184.611497] SLOW spr round 23 (radius: 5) [04:42:17 -6179.369533] SLOW spr round 24 (radius: 5) [04:43:32 -6145.152615] SLOW spr round 25 (radius: 5) [04:44:44 -6145.150602] SLOW spr round 26 (radius: 10) [04:45:59 -6145.150457] SLOW spr round 27 (radius: 15) [04:47:32 -6145.150444] SLOW spr round 28 (radius: 20) [04:49:34 -6145.150443] SLOW spr round 29 (radius: 25) [04:51:50 -6014.779185] SLOW spr round 30 (radius: 5) [04:53:13 -6014.367851] SLOW spr round 31 (radius: 5) [04:54:28 -6013.750505] SLOW spr round 32 (radius: 5) [04:55:41 -6013.749436] SLOW spr round 33 (radius: 10) [04:56:59 -6012.889421] SLOW spr round 34 (radius: 5) [04:58:14 -6012.870762] SLOW spr round 35 (radius: 10) [04:59:32 -6012.870273] SLOW spr round 36 (radius: 15) [05:01:05 -6008.896785] SLOW spr round 37 (radius: 5) [05:02:24 -6007.444404] SLOW spr round 38 (radius: 5) [05:03:35 -6007.444147] SLOW spr round 39 (radius: 10) [05:04:55 -6000.880826] SLOW spr round 40 (radius: 5) [05:06:10 -6000.340826] SLOW spr round 41 (radius: 5) [05:07:21 -6000.340352] SLOW spr round 42 (radius: 10) [05:08:36 -6000.340323] SLOW spr round 43 (radius: 15) [05:10:09 -6000.340323] SLOW spr round 44 (radius: 20) [05:12:08 -5993.308525] SLOW spr round 45 (radius: 5) [05:13:26 -5993.308523] SLOW spr round 46 (radius: 10) [05:14:44 -5993.228040] SLOW spr round 47 (radius: 15) [05:16:14 -5993.228039] SLOW spr round 48 (radius: 20) [05:18:13 -5993.228038] SLOW spr round 49 (radius: 25) [05:20:28 -5990.217577] SLOW spr round 50 (radius: 5) [05:21:49 -5988.480184] SLOW spr round 51 (radius: 5) [05:23:02 -5988.480047] SLOW spr round 52 (radius: 10) [05:24:18 -5988.480046] SLOW spr round 53 (radius: 15) [05:25:50 -5986.885392] SLOW spr round 54 (radius: 5) [05:27:10 -5986.382545] SLOW spr round 55 (radius: 5) [05:28:21 -5986.382290] SLOW spr round 56 (radius: 10) [05:29:38 -5986.382285] SLOW spr round 57 (radius: 15) [05:31:12 -5986.382284] SLOW spr round 58 (radius: 20) [05:33:19 -5986.382284] SLOW spr round 59 (radius: 25) [05:35:45 -5983.153513] SLOW spr round 60 (radius: 5) [05:37:05 -5983.150680] SLOW spr round 61 (radius: 10) [05:38:23 -5983.150641] SLOW spr round 62 (radius: 15) [05:39:54 -5983.150640] SLOW spr round 63 (radius: 20) [05:41:58 -5983.150640] SLOW spr round 64 (radius: 25) [05:44:19 -5983.150640] Model parameter optimization (eps = 0.100000) [05:44:28] ML tree search #4, logLikelihood: -5982.319808 [05:44:28 -68757.400973] Initial branch length optimization [05:44:30 -53944.754364] Model parameter optimization (eps = 10.000000) [05:44:54 -53313.184621] AUTODETECT spr round 1 (radius: 5) [05:46:16 -28056.100811] AUTODETECT spr round 2 (radius: 10) [05:47:45 -17493.248403] AUTODETECT spr round 3 (radius: 15) [05:49:12 -13439.283025] AUTODETECT spr round 4 (radius: 20) [05:50:45 -10434.269596] AUTODETECT spr round 5 (radius: 25) [05:52:21 -9370.576911] SPR radius for FAST iterations: 25 (autodetect) [05:52:22 -9370.576911] Model parameter optimization (eps = 3.000000) [05:52:38 -9292.129634] FAST spr round 1 (radius: 25) [05:53:58 -7774.763591] FAST spr round 2 (radius: 25) [05:55:13 -7569.312406] FAST spr round 3 (radius: 25) [05:56:27 -7521.050806] FAST spr round 4 (radius: 25) [05:57:35 -7519.953619] FAST spr round 5 (radius: 25) [05:58:44 -7519.793027] FAST spr round 6 (radius: 25) [05:59:53 -7509.533325] FAST spr round 7 (radius: 25) [06:01:01 -7509.533152] Model parameter optimization (eps = 1.000000) [06:01:20 -7506.823746] SLOW spr round 1 (radius: 5) [06:02:34 -7505.711308] SLOW spr round 2 (radius: 5) [06:03:47 -7505.007549] SLOW spr round 3 (radius: 5) [06:04:58 -7505.006452] SLOW spr round 4 (radius: 10) [06:06:17 -7474.171685] SLOW spr round 5 (radius: 5) [06:07:37 -7466.853431] SLOW spr round 6 (radius: 5) [06:08:50 -7466.836792] SLOW spr round 7 (radius: 10) [06:10:07 -7445.178992] SLOW spr round 8 (radius: 5) [06:11:25 -7445.127808] SLOW spr round 9 (radius: 10) [06:12:43 -7442.699659] SLOW spr round 10 (radius: 5) [06:14:00 -7442.699377] SLOW spr round 11 (radius: 10) [06:15:17 -7442.699335] SLOW spr round 12 (radius: 15) [06:16:56 -7408.859082] SLOW spr round 13 (radius: 5) [06:18:18 -7388.791809] SLOW spr round 14 (radius: 5) [06:19:33 -7384.914865] SLOW spr round 15 (radius: 5) [06:20:44 -7384.914801] SLOW spr round 16 (radius: 10) [06:22:01 -7384.902444] SLOW spr round 17 (radius: 15) [06:23:40 -7096.451821] SLOW spr round 18 (radius: 5) [06:25:04 -7065.208503] SLOW spr round 19 (radius: 5) [06:26:18 -7061.282822] SLOW spr round 20 (radius: 5) [06:27:29 -7061.281878] SLOW spr round 21 (radius: 10) [06:28:46 -7060.927145] SLOW spr round 22 (radius: 5) [06:30:04 -7060.390532] SLOW spr round 23 (radius: 5) [06:31:17 -7060.389010] SLOW spr round 24 (radius: 10) [06:32:33 -7060.387538] SLOW spr round 25 (radius: 15) [06:34:08 -7058.266350] SLOW spr round 26 (radius: 5) [06:35:28 -7058.264778] SLOW spr round 27 (radius: 10) [06:36:47 -7058.262205] SLOW spr round 28 (radius: 15) [06:38:22 -6990.052289] SLOW spr round 29 (radius: 5) [06:39:44 -6917.693445] SLOW spr round 30 (radius: 5) [06:40:58 -6917.693066] SLOW spr round 31 (radius: 10) [06:42:14 -6917.692955] SLOW spr round 32 (radius: 15) [06:43:48 -6917.692897] SLOW spr round 33 (radius: 20) [06:45:48 -6911.706703] SLOW spr round 34 (radius: 5) [06:47:11 -6880.864102] SLOW spr round 35 (radius: 5) [06:48:26 -6880.834733] SLOW spr round 36 (radius: 10) [06:49:43 -6880.833129] SLOW spr round 37 (radius: 15) [06:51:15 -6880.314718] SLOW spr round 38 (radius: 5) [06:52:36 -6879.846424] SLOW spr round 39 (radius: 5) [06:53:49 -6879.844776] SLOW spr round 40 (radius: 10) [06:55:06 -6879.844326] SLOW spr round 41 (radius: 15) [06:56:37 -6879.844203] SLOW spr round 42 (radius: 20) [06:58:35 -6879.412392] SLOW spr round 43 (radius: 5) [06:59:56 -6879.411635] SLOW spr round 44 (radius: 10) [07:01:14 -6879.411440] SLOW spr round 45 (radius: 15) [07:02:45 -6878.815503] SLOW spr round 46 (radius: 5) [07:04:05 -6878.814666] SLOW spr round 47 (radius: 10) [07:05:22 -6878.814551] SLOW spr round 48 (radius: 15) [07:06:53 -6878.814524] SLOW spr round 49 (radius: 20) [07:08:51 -6878.814518] SLOW spr round 50 (radius: 25) [07:11:08 -6697.019175] SLOW spr round 51 (radius: 5) [07:12:32 -6372.214422] SLOW spr round 52 (radius: 5) [07:13:48 -6230.762729] SLOW spr round 53 (radius: 5) [07:15:02 -6226.331441] SLOW spr round 54 (radius: 5) [07:16:13 -6226.328750] SLOW spr round 55 (radius: 10) [07:17:29 -6206.705774] SLOW spr round 56 (radius: 5) [07:18:45 -6202.464701] SLOW spr round 57 (radius: 5) [07:19:57 -6202.464197] SLOW spr round 58 (radius: 10) [07:21:13 -6202.464187] SLOW spr round 59 (radius: 15) [07:22:42 -6192.526940] SLOW spr round 60 (radius: 5) [07:24:03 -6183.579915] SLOW spr round 61 (radius: 5) [07:25:15 -6181.153820] SLOW spr round 62 (radius: 5) [07:26:26 -6181.153794] SLOW spr round 63 (radius: 10) [07:27:41 -6181.153793] SLOW spr round 64 (radius: 15) [07:29:11 -6180.811753] SLOW spr round 65 (radius: 5) [07:30:30 -6180.811741] SLOW spr round 66 (radius: 10) [07:31:48 -6056.696447] SLOW spr round 67 (radius: 5) [07:33:05 -6047.945351] SLOW spr round 68 (radius: 5) [07:34:17 -6047.839169] SLOW spr round 69 (radius: 5) [07:35:28 -6047.839037] SLOW spr round 70 (radius: 10) [07:36:45 -6042.822131] SLOW spr round 71 (radius: 5) [07:38:03 -6036.769867] SLOW spr round 72 (radius: 5) [07:39:15 -6036.769663] SLOW spr round 73 (radius: 10) [07:40:30 -6036.716633] SLOW spr round 74 (radius: 15) [07:42:02 -6031.606317] SLOW spr round 75 (radius: 5) [07:43:22 -6029.687899] SLOW spr round 76 (radius: 5) [07:44:34 -6029.687897] SLOW spr round 77 (radius: 10) [07:45:50 -6029.687892] SLOW spr round 78 (radius: 15) [07:47:20 -6028.971040] SLOW spr round 79 (radius: 5) [07:48:39 -6028.971024] SLOW spr round 80 (radius: 10) [07:49:55 -6028.971022] SLOW spr round 81 (radius: 15) [07:51:25 -6028.971020] SLOW spr round 82 (radius: 20) [07:53:20 -6028.933133] SLOW spr round 83 (radius: 25) [07:55:35 -6026.901165] SLOW spr round 84 (radius: 5) [07:56:56 -6026.186446] SLOW spr round 85 (radius: 5) [07:58:10 -6026.186421] SLOW spr round 86 (radius: 10) [07:59:25 -6026.186420] SLOW spr round 87 (radius: 15) [08:00:56 -6026.186420] SLOW spr round 88 (radius: 20) [08:02:52 -6026.186420] SLOW spr round 89 (radius: 25) [08:05:02 -6026.186420] Model parameter optimization (eps = 0.100000) [08:05:12] ML tree search #5, logLikelihood: -6025.509381 [08:05:12 -68878.227926] Initial branch length optimization [08:05:14 -53655.054723] Model parameter optimization (eps = 10.000000) [08:05:40 -53124.412944] AUTODETECT spr round 1 (radius: 5) [08:07:04 -28091.938783] AUTODETECT spr round 2 (radius: 10) [08:08:33 -17995.836726] AUTODETECT spr round 3 (radius: 15) [08:10:01 -12477.843923] AUTODETECT spr round 4 (radius: 20) [08:11:30 -10720.213906] AUTODETECT spr round 5 (radius: 25) [08:13:13 -9569.214361] SPR radius for FAST iterations: 25 (autodetect) [08:13:13 -9569.214361] Model parameter optimization (eps = 3.000000) [08:13:31 -9504.012500] FAST spr round 1 (radius: 25) [08:14:52 -7301.459067] FAST spr round 2 (radius: 25) [08:16:07 -6983.029470] FAST spr round 3 (radius: 25) [08:17:23 -6847.144115] FAST spr round 4 (radius: 25) [08:18:37 -6772.005344] FAST spr round 5 (radius: 25) [08:19:50 -6754.631086] FAST spr round 6 (radius: 25) [08:21:01 -6754.629718] Model parameter optimization (eps = 1.000000) [08:21:10 -6753.383145] SLOW spr round 1 (radius: 5) [08:22:25 -6751.455824] SLOW spr round 2 (radius: 5) [08:23:36 -6751.455783] SLOW spr round 3 (radius: 10) [08:24:56 -6642.483225] SLOW spr round 4 (radius: 5) [08:26:16 -6616.620013] SLOW spr round 5 (radius: 5) [08:27:30 -6616.609597] SLOW spr round 6 (radius: 10) [08:28:50 -6559.711425] SLOW spr round 7 (radius: 5) [08:30:09 -6499.155924] SLOW spr round 8 (radius: 5) [08:31:23 -6483.341781] SLOW spr round 9 (radius: 5) [08:32:37 -6466.383360] SLOW spr round 10 (radius: 5) [08:33:48 -6466.383328] SLOW spr round 11 (radius: 10) [08:35:05 -6465.484903] SLOW spr round 12 (radius: 5) [08:36:22 -6464.934810] SLOW spr round 13 (radius: 5) [08:37:35 -6463.983514] SLOW spr round 14 (radius: 5) [08:38:46 -6463.983072] SLOW spr round 15 (radius: 10) [08:40:02 -6463.983061] SLOW spr round 16 (radius: 15) [08:41:39 -6408.067873] SLOW spr round 17 (radius: 5) [08:43:00 -6405.411945] SLOW spr round 18 (radius: 5) [08:44:14 -6405.408978] SLOW spr round 19 (radius: 10) [08:45:32 -6405.089014] SLOW spr round 20 (radius: 5) [08:46:48 -6405.088536] SLOW spr round 21 (radius: 10) [08:48:05 -6405.080706] SLOW spr round 22 (radius: 15) [08:49:39 -6373.865796] SLOW spr round 23 (radius: 5) [08:51:01 -6365.162011] SLOW spr round 24 (radius: 5) [08:52:15 -6365.161960] SLOW spr round 25 (radius: 10) [08:53:31 -6365.161955] SLOW spr round 26 (radius: 15) [08:55:01 -6365.161954] SLOW spr round 27 (radius: 20) [08:56:55 -6363.755712] SLOW spr round 28 (radius: 5) [08:58:16 -6363.583143] SLOW spr round 29 (radius: 5) [08:59:29 -6363.583143] SLOW spr round 30 (radius: 10) [09:00:46 -6363.583091] SLOW spr round 31 (radius: 15) [09:02:19 -6296.689263] SLOW spr round 32 (radius: 5) [09:03:42 -6214.125398] SLOW spr round 33 (radius: 5) [09:04:55 -6212.046045] SLOW spr round 34 (radius: 5) [09:06:07 -6212.041452] SLOW spr round 35 (radius: 10) [09:07:24 -6212.041441] SLOW spr round 36 (radius: 15) [09:08:54 -6209.755536] SLOW spr round 37 (radius: 5) [09:10:14 -6209.755511] SLOW spr round 38 (radius: 10) [09:11:31 -6209.755509] SLOW spr round 39 (radius: 15) [09:13:00 -6208.788238] SLOW spr round 40 (radius: 5) [09:14:20 -6208.788212] SLOW spr round 41 (radius: 10) [09:15:38 -6208.788210] SLOW spr round 42 (radius: 15) [09:17:08 -6208.788209] SLOW spr round 43 (radius: 20) [09:19:03 -6208.654737] SLOW spr round 44 (radius: 5) [09:20:24 -6208.654737] SLOW spr round 45 (radius: 10) [09:21:42 -6208.654737] SLOW spr round 46 (radius: 15) [09:23:12 -6208.654737] SLOW spr round 47 (radius: 20) [09:25:10 -6208.637290] SLOW spr round 48 (radius: 25) [09:27:28 -6182.763123] SLOW spr round 49 (radius: 5) [09:28:51 -6063.014531] SLOW spr round 50 (radius: 5) [09:30:07 -6058.118148] SLOW spr round 51 (radius: 5) [09:31:18 -6058.117810] SLOW spr round 52 (radius: 10) [09:32:35 -6058.117780] SLOW spr round 53 (radius: 15) [09:34:07 -6045.608355] SLOW spr round 54 (radius: 5) [09:35:27 -6045.607421] SLOW spr round 55 (radius: 10) [09:36:45 -6045.607377] SLOW spr round 56 (radius: 15) [09:38:15 -6045.607372] SLOW spr round 57 (radius: 20) [09:40:13 -6045.607372] SLOW spr round 58 (radius: 25) [09:42:27 -6045.607372] Model parameter optimization (eps = 0.100000) [09:42:41] ML tree search #6, logLikelihood: -6045.250060 [09:42:41 -70134.825471] Initial branch length optimization [09:42:43 -55211.488491] Model parameter optimization (eps = 10.000000) [09:43:05 -54644.199284] AUTODETECT spr round 1 (radius: 5) [09:44:27 -27458.760367] AUTODETECT spr round 2 (radius: 10) [09:45:54 -17221.925034] AUTODETECT spr round 3 (radius: 15) [09:47:23 -12004.327964] AUTODETECT spr round 4 (radius: 20) [09:48:55 -10090.983721] AUTODETECT spr round 5 (radius: 25) [09:50:34 -8653.786197] SPR radius for FAST iterations: 25 (autodetect) [09:50:35 -8653.786197] Model parameter optimization (eps = 3.000000) [09:50:51 -8562.510764] FAST spr round 1 (radius: 25) [09:52:19 -7086.045305] FAST spr round 2 (radius: 25) [09:53:37 -6900.036194] FAST spr round 3 (radius: 25) [09:54:55 -6889.485304] FAST spr round 4 (radius: 25) [09:56:10 -6880.627998] FAST spr round 5 (radius: 25) [09:57:24 -6879.429475] FAST spr round 6 (radius: 25) [09:58:37 -6879.428712] Model parameter optimization (eps = 1.000000) [09:58:48 -6877.255195] SLOW spr round 1 (radius: 5) [10:00:03 -6877.240715] SLOW spr round 2 (radius: 10) [10:01:22 -6873.996931] SLOW spr round 3 (radius: 5) [10:02:42 -6871.030304] SLOW spr round 4 (radius: 5) [10:03:55 -6870.993575] SLOW spr round 5 (radius: 10) [10:05:13 -6870.992789] SLOW spr round 6 (radius: 15) [10:06:42 -6865.003195] SLOW spr round 7 (radius: 5) [10:08:03 -6862.720701] SLOW spr round 8 (radius: 5) [10:09:17 -6862.720189] SLOW spr round 9 (radius: 10) [10:10:34 -6862.720128] SLOW spr round 10 (radius: 15) [10:12:03 -6720.677065] SLOW spr round 11 (radius: 5) [10:13:24 -6720.052386] SLOW spr round 12 (radius: 5) [10:14:37 -6720.051345] SLOW spr round 13 (radius: 10) [10:15:54 -6720.051308] SLOW spr round 14 (radius: 15) [10:17:20 -6720.051305] SLOW spr round 15 (radius: 20) [10:19:02 -6719.428733] SLOW spr round 16 (radius: 5) [10:20:22 -6719.428732] SLOW spr round 17 (radius: 10) [10:21:40 -6718.081804] SLOW spr round 18 (radius: 5) [10:22:56 -6718.081804] SLOW spr round 19 (radius: 10) [10:24:13 -6718.081804] SLOW spr round 20 (radius: 15) [10:25:39 -6718.081804] SLOW spr round 21 (radius: 20) [10:27:21 -6718.081804] SLOW spr round 22 (radius: 25) [10:29:11 -6684.906420] SLOW spr round 23 (radius: 5) [10:30:35 -6662.336574] SLOW spr round 24 (radius: 5) [10:31:48 -6662.335527] SLOW spr round 25 (radius: 10) [10:33:05 -6662.335436] SLOW spr round 26 (radius: 15) [10:34:31 -6662.335428] SLOW spr round 27 (radius: 20) [10:36:12 -6662.335427] SLOW spr round 28 (radius: 25) [10:38:01 -6662.335427] Model parameter optimization (eps = 0.100000) [10:38:14] ML tree search #7, logLikelihood: -6662.107995 [10:38:14 -69631.247691] Initial branch length optimization [10:38:16 -54341.953449] Model parameter optimization (eps = 10.000000) [10:38:35 -53967.648908] AUTODETECT spr round 1 (radius: 5) [10:40:00 -30437.090046] AUTODETECT spr round 2 (radius: 10) [10:41:28 -19298.068721] AUTODETECT spr round 3 (radius: 15) [10:42:54 -13898.479568] AUTODETECT spr round 4 (radius: 20) [10:44:26 -11836.412291] AUTODETECT spr round 5 (radius: 25) [10:46:06 -9195.001435] SPR radius for FAST iterations: 25 (autodetect) [10:46:06 -9195.001435] Model parameter optimization (eps = 3.000000) [10:46:20 -9175.943301] FAST spr round 1 (radius: 25) [10:47:43 -6673.376505] FAST spr round 2 (radius: 25) [10:49:02 -6262.493563] FAST spr round 3 (radius: 25) [10:50:16 -6189.408446] FAST spr round 4 (radius: 25) [10:51:31 -6182.915510] FAST spr round 5 (radius: 25) [10:52:44 -6182.870320] Model parameter optimization (eps = 1.000000) [10:52:57 -6180.575774] SLOW spr round 1 (radius: 5) [10:54:09 -6180.015919] SLOW spr round 2 (radius: 5) [10:55:22 -6176.936908] SLOW spr round 3 (radius: 5) [10:56:34 -6176.936380] SLOW spr round 4 (radius: 10) [10:57:54 -6175.062304] SLOW spr round 5 (radius: 5) [10:59:08 -6173.665277] SLOW spr round 6 (radius: 5) [11:00:21 -6173.665038] SLOW spr round 7 (radius: 10) [11:01:40 -6173.664798] SLOW spr round 8 (radius: 15) [11:03:10 -6165.558425] SLOW spr round 9 (radius: 5) [11:04:31 -6164.975001] SLOW spr round 10 (radius: 5) [11:05:45 -6164.974830] SLOW spr round 11 (radius: 10) [11:07:04 -6164.974612] SLOW spr round 12 (radius: 15) [11:08:32 -6164.974490] SLOW spr round 13 (radius: 20) [11:10:23 -6164.974397] SLOW spr round 14 (radius: 25) [11:12:27 -6111.096145] SLOW spr round 15 (radius: 5) [11:13:48 -6077.881168] SLOW spr round 16 (radius: 5) [11:15:01 -6077.880879] SLOW spr round 17 (radius: 10) [11:16:19 -6036.690379] SLOW spr round 18 (radius: 5) [11:17:35 -6035.413394] SLOW spr round 19 (radius: 5) [11:18:46 -6035.413319] SLOW spr round 20 (radius: 10) [11:20:02 -6035.413303] SLOW spr round 21 (radius: 15) [11:21:29 -6035.413253] SLOW spr round 22 (radius: 20) [11:23:21 -6035.413239] SLOW spr round 23 (radius: 25) [11:25:19 -6035.413239] Model parameter optimization (eps = 0.100000) [11:25:27] ML tree search #8, logLikelihood: -6035.296653 [11:25:27 -69994.140778] Initial branch length optimization [11:25:29 -54883.317313] Model parameter optimization (eps = 10.000000) [11:25:51 -54457.906788] AUTODETECT spr round 1 (radius: 5) [11:27:16 -29067.805917] AUTODETECT spr round 2 (radius: 10) [11:28:45 -18829.138987] AUTODETECT spr round 3 (radius: 15) [11:30:10 -12745.171369] AUTODETECT spr round 4 (radius: 20) [11:31:43 -10547.270059] AUTODETECT spr round 5 (radius: 25) [11:33:21 -8788.215088] SPR radius for FAST iterations: 25 (autodetect) [11:33:21 -8788.215088] Model parameter optimization (eps = 3.000000) [11:33:37 -8774.245069] FAST spr round 1 (radius: 25) [11:35:03 -6690.380826] FAST spr round 2 (radius: 25) [11:36:19 -6441.201430] FAST spr round 3 (radius: 25) [11:37:34 -6423.830457] FAST spr round 4 (radius: 25) [11:38:47 -6421.921962] FAST spr round 5 (radius: 25) [11:39:59 -6421.921658] Model parameter optimization (eps = 1.000000) [11:40:08 -6420.493221] SLOW spr round 1 (radius: 5) [11:41:21 -6419.405690] SLOW spr round 2 (radius: 5) [11:42:33 -6417.863661] SLOW spr round 3 (radius: 5) [11:43:45 -6417.863491] SLOW spr round 4 (radius: 10) [11:45:04 -6414.125616] SLOW spr round 5 (radius: 5) [11:46:21 -6382.108096] SLOW spr round 6 (radius: 5) [11:47:33 -6382.106748] SLOW spr round 7 (radius: 10) [11:48:52 -6382.106630] SLOW spr round 8 (radius: 15) [11:50:27 -6242.151568] SLOW spr round 9 (radius: 5) [11:51:47 -6081.225635] SLOW spr round 10 (radius: 5) [11:53:01 -6062.448611] SLOW spr round 11 (radius: 5) [11:54:13 -6062.438063] SLOW spr round 12 (radius: 10) [11:55:31 -6060.480747] SLOW spr round 13 (radius: 5) [11:56:48 -6057.489012] SLOW spr round 14 (radius: 5) [11:57:59 -6057.488057] SLOW spr round 15 (radius: 10) [11:59:16 -6057.487271] SLOW spr round 16 (radius: 15) [12:00:48 -5994.153372] SLOW spr round 17 (radius: 5) [12:02:08 -5990.244406] SLOW spr round 18 (radius: 5) [12:03:19 -5990.244033] SLOW spr round 19 (radius: 10) [12:04:37 -5990.088405] SLOW spr round 20 (radius: 5) [12:05:52 -5990.088253] SLOW spr round 21 (radius: 10) [12:07:07 -5990.088128] SLOW spr round 22 (radius: 15) [12:08:38 -5987.338218] SLOW spr round 23 (radius: 5) [12:09:58 -5987.336008] SLOW spr round 24 (radius: 10) [12:11:16 -5987.014841] SLOW spr round 25 (radius: 5) [12:12:31 -5986.968021] SLOW spr round 26 (radius: 10) [12:13:48 -5986.967493] SLOW spr round 27 (radius: 15) [12:15:17 -5986.967441] SLOW spr round 28 (radius: 20) [12:17:11 -5986.967386] SLOW spr round 29 (radius: 25) [12:19:16 -5986.967357] Model parameter optimization (eps = 0.100000) [12:19:27] ML tree search #9, logLikelihood: -5986.402876 [12:19:27 -69656.198321] Initial branch length optimization [12:19:29 -54796.399442] Model parameter optimization (eps = 10.000000) [12:19:55 -54362.646492] AUTODETECT spr round 1 (radius: 5) [12:21:19 -28083.104569] AUTODETECT spr round 2 (radius: 10) [12:22:54 -18638.374235] AUTODETECT spr round 3 (radius: 15) [12:24:21 -13605.422108] AUTODETECT spr round 4 (radius: 20) [12:25:53 -10399.821616] AUTODETECT spr round 5 (radius: 25) [12:27:29 -8784.481299] SPR radius for FAST iterations: 25 (autodetect) [12:27:29 -8784.481299] Model parameter optimization (eps = 3.000000) [12:27:49 -8757.642038] FAST spr round 1 (radius: 25) [12:29:14 -6803.028220] FAST spr round 2 (radius: 25) [12:30:32 -6606.743951] FAST spr round 3 (radius: 25) [12:31:49 -6558.508088] FAST spr round 4 (radius: 25) [12:33:03 -6555.584876] FAST spr round 5 (radius: 25) [12:34:16 -6554.687985] FAST spr round 6 (radius: 25) [12:35:28 -6554.685811] Model parameter optimization (eps = 1.000000) [12:35:40 -6552.099403] SLOW spr round 1 (radius: 5) [12:36:52 -6543.404157] SLOW spr round 2 (radius: 5) [12:38:04 -6537.312613] SLOW spr round 3 (radius: 5) [12:39:16 -6530.638158] SLOW spr round 4 (radius: 5) [12:40:27 -6530.637641] SLOW spr round 5 (radius: 10) [12:41:44 -6478.401393] SLOW spr round 6 (radius: 5) [12:43:01 -6433.246617] SLOW spr round 7 (radius: 5) [12:44:12 -6433.037701] SLOW spr round 8 (radius: 5) [12:45:22 -6433.037594] SLOW spr round 9 (radius: 10) [12:46:39 -6433.037516] SLOW spr round 10 (radius: 15) [12:48:08 -6424.912186] SLOW spr round 11 (radius: 5) [12:49:28 -6353.374795] SLOW spr round 12 (radius: 5) [12:50:42 -6351.673269] SLOW spr round 13 (radius: 5) [12:51:52 -6351.672167] SLOW spr round 14 (radius: 10) [12:53:08 -6278.051846] SLOW spr round 15 (radius: 5) [12:54:23 -6277.970790] SLOW spr round 16 (radius: 10) [12:55:40 -6277.457034] SLOW spr round 17 (radius: 5) [12:56:54 -6277.077375] SLOW spr round 18 (radius: 5) [12:58:05 -6277.077347] SLOW spr round 19 (radius: 10) [12:59:21 -6277.077337] SLOW spr round 20 (radius: 15) [13:00:52 -6270.686609] SLOW spr round 21 (radius: 5) [13:02:11 -6270.568147] SLOW spr round 22 (radius: 5) [13:03:23 -6270.567964] SLOW spr round 23 (radius: 10) [13:04:39 -6270.567950] SLOW spr round 24 (radius: 15) [13:06:09 -6270.567945] SLOW spr round 25 (radius: 20) [13:08:06 -6270.567943] SLOW spr round 26 (radius: 25) [13:10:25 -6270.567941] Model parameter optimization (eps = 0.100000) [13:10:38] ML tree search #10, logLikelihood: -6269.485921 [13:10:38 -70371.374915] Initial branch length optimization [13:10:39 -55669.975687] Model parameter optimization (eps = 10.000000) [13:11:05 -55331.901427] AUTODETECT spr round 1 (radius: 5) [13:12:34 -28891.166133] AUTODETECT spr round 2 (radius: 10) [13:14:04 -17676.111937] AUTODETECT spr round 3 (radius: 15) [13:15:31 -12664.536791] AUTODETECT spr round 4 (radius: 20) [13:17:02 -9863.061475] AUTODETECT spr round 5 (radius: 25) [13:18:50 -7637.804394] SPR radius for FAST iterations: 25 (autodetect) [13:18:50 -7637.804394] Model parameter optimization (eps = 3.000000) [13:19:11 -7620.690006] FAST spr round 1 (radius: 25) [13:20:36 -6342.173279] FAST spr round 2 (radius: 25) [13:21:55 -6090.837819] FAST spr round 3 (radius: 25) [13:23:10 -6088.107779] FAST spr round 4 (radius: 25) [13:24:24 -6085.510253] FAST spr round 5 (radius: 25) [13:25:36 -6085.508769] Model parameter optimization (eps = 1.000000) [13:25:50 -6083.101261] SLOW spr round 1 (radius: 5) [13:27:03 -6077.033651] SLOW spr round 2 (radius: 5) [13:28:15 -6076.795757] SLOW spr round 3 (radius: 5) [13:29:25 -6076.795019] SLOW spr round 4 (radius: 10) [13:30:43 -6067.620241] SLOW spr round 5 (radius: 5) [13:32:01 -6059.889148] SLOW spr round 6 (radius: 5) [13:33:14 -6059.887852] SLOW spr round 7 (radius: 10) [13:34:30 -6059.015745] SLOW spr round 8 (radius: 5) [13:35:46 -6059.014866] SLOW spr round 9 (radius: 10) [13:37:02 -6059.014348] SLOW spr round 10 (radius: 15) [13:38:31 -6059.013961] SLOW spr round 11 (radius: 20) [13:40:25 -6058.869286] SLOW spr round 12 (radius: 5) [13:41:46 -6058.766082] SLOW spr round 13 (radius: 5) [13:42:58 -6058.765797] SLOW spr round 14 (radius: 10) [13:44:15 -6058.431443] SLOW spr round 15 (radius: 5) [13:45:30 -6058.417142] SLOW spr round 16 (radius: 10) [13:46:47 -6058.417049] SLOW spr round 17 (radius: 15) [13:48:13 -6058.416996] SLOW spr round 18 (radius: 20) [13:50:04 -6058.416957] SLOW spr round 19 (radius: 25) [13:52:08 -6058.347610] Model parameter optimization (eps = 0.100000) [13:52:17] ML tree search #11, logLikelihood: -6057.973040 [13:52:18 -69537.246756] Initial branch length optimization [13:52:19 -54048.918601] Model parameter optimization (eps = 10.000000) [13:52:44 -53416.833566] AUTODETECT spr round 1 (radius: 5) [13:54:05 -29041.093166] AUTODETECT spr round 2 (radius: 10) [13:55:35 -18313.875448] AUTODETECT spr round 3 (radius: 15) [13:57:05 -13452.343489] AUTODETECT spr round 4 (radius: 20) [13:58:34 -11290.791274] AUTODETECT spr round 5 (radius: 25) [14:00:12 -10327.748905] SPR radius for FAST iterations: 25 (autodetect) [14:00:12 -10327.748905] Model parameter optimization (eps = 3.000000) [14:00:28 -10266.778735] FAST spr round 1 (radius: 25) [14:01:49 -7256.558723] FAST spr round 2 (radius: 25) [14:03:04 -6506.086901] FAST spr round 3 (radius: 25) [14:04:18 -6316.337513] FAST spr round 4 (radius: 25) [14:05:35 -6295.096845] FAST spr round 5 (radius: 25) [14:06:51 -6262.777160] FAST spr round 6 (radius: 25) [14:08:08 -6230.394462] FAST spr round 7 (radius: 25) [14:09:23 -6222.337804] FAST spr round 8 (radius: 25) [14:10:39 -6218.904109] FAST spr round 9 (radius: 25) [14:11:53 -6216.803820] FAST spr round 10 (radius: 25) [14:13:07 -6216.803456] Model parameter optimization (eps = 1.000000) [14:13:14 -6215.860002] SLOW spr round 1 (radius: 5) [14:14:26 -6214.582914] SLOW spr round 2 (radius: 5) [14:15:39 -6214.124563] SLOW spr round 3 (radius: 5) [14:16:53 -6214.123892] SLOW spr round 4 (radius: 10) [14:18:12 -6190.744670] SLOW spr round 5 (radius: 5) [14:19:29 -6187.208069] SLOW spr round 6 (radius: 5) [14:20:43 -6187.207616] SLOW spr round 7 (radius: 10) [14:22:01 -6187.207308] SLOW spr round 8 (radius: 15) [14:23:29 -6171.646949] SLOW spr round 9 (radius: 5) [14:24:49 -6152.478576] SLOW spr round 10 (radius: 5) [14:26:05 -6152.478464] SLOW spr round 11 (radius: 10) [14:27:25 -6152.047818] SLOW spr round 12 (radius: 5) [14:28:41 -6152.047737] SLOW spr round 13 (radius: 10) [14:30:01 -6152.047620] SLOW spr round 14 (radius: 15) [14:31:27 -6152.047450] SLOW spr round 15 (radius: 20) [14:33:08 -6149.063005] SLOW spr round 16 (radius: 5) [14:34:30 -6148.971623] SLOW spr round 17 (radius: 10) [14:35:49 -6147.395144] SLOW spr round 18 (radius: 5) [14:37:04 -6147.226333] SLOW spr round 19 (radius: 5) [14:38:16 -6147.226223] SLOW spr round 20 (radius: 10) [14:39:33 -6147.226196] SLOW spr round 21 (radius: 15) [14:40:57 -6142.190451] SLOW spr round 22 (radius: 5) [14:42:17 -6140.675156] SLOW spr round 23 (radius: 5) [14:43:32 -6140.463516] SLOW spr round 24 (radius: 5) [14:44:44 -6140.463454] SLOW spr round 25 (radius: 10) [14:46:01 -6140.339868] SLOW spr round 26 (radius: 5) [14:47:16 -6140.338811] SLOW spr round 27 (radius: 10) [14:48:33 -6140.338798] SLOW spr round 28 (radius: 15) [14:49:57 -6140.338785] SLOW spr round 29 (radius: 20) [14:51:43 -6138.557951] SLOW spr round 30 (radius: 5) [14:53:03 -6138.557808] SLOW spr round 31 (radius: 10) [14:54:22 -6134.664981] SLOW spr round 32 (radius: 5) [14:55:39 -6132.789632] SLOW spr round 33 (radius: 5) [14:56:51 -6132.238733] SLOW spr round 34 (radius: 5) [14:58:02 -6132.238715] SLOW spr round 35 (radius: 10) [14:59:20 -6131.369172] SLOW spr round 36 (radius: 5) [15:00:35 -6131.368537] SLOW spr round 37 (radius: 10) [15:01:54 -6131.368499] SLOW spr round 38 (radius: 15) [15:03:26 -6131.232322] SLOW spr round 39 (radius: 5) [15:04:50 -6131.231074] SLOW spr round 40 (radius: 10) [15:06:13 -6131.231068] SLOW spr round 41 (radius: 15) [15:07:40 -6131.231063] SLOW spr round 42 (radius: 20) [15:09:32 -6129.312715] SLOW spr round 43 (radius: 5) [15:10:52 -6128.611211] SLOW spr round 44 (radius: 5) [15:12:06 -6128.611202] SLOW spr round 45 (radius: 10) [15:13:23 -6128.611196] SLOW spr round 46 (radius: 15) [15:14:51 -6122.483637] SLOW spr round 47 (radius: 5) [15:16:12 -6088.472322] SLOW spr round 48 (radius: 5) [15:17:25 -6088.471449] SLOW spr round 49 (radius: 10) [15:18:42 -6088.471385] SLOW spr round 50 (radius: 15) [15:20:08 -6088.471376] SLOW spr round 51 (radius: 20) [15:21:58 -6088.471371] SLOW spr round 52 (radius: 25) [15:24:07 -6082.138536] SLOW spr round 53 (radius: 5) [15:25:27 -6081.976074] SLOW spr round 54 (radius: 5) [15:26:40 -6081.975240] SLOW spr round 55 (radius: 10) [15:27:56 -6081.974578] SLOW spr round 56 (radius: 15) [15:29:23 -6081.811912] SLOW spr round 57 (radius: 5) [15:30:42 -6081.811579] SLOW spr round 58 (radius: 10) [15:31:59 -6081.811315] SLOW spr round 59 (radius: 15) [15:33:26 -6081.811105] SLOW spr round 60 (radius: 20) [15:35:16 -6081.810937] SLOW spr round 61 (radius: 25) [15:37:23 -6081.810802] Model parameter optimization (eps = 0.100000) [15:37:33] ML tree search #12, logLikelihood: -6081.526156 [15:37:33 -69406.854104] Initial branch length optimization [15:37:35 -54175.807693] Model parameter optimization (eps = 10.000000) [15:37:56 -53808.469362] AUTODETECT spr round 1 (radius: 5) [15:39:21 -27187.682296] AUTODETECT spr round 2 (radius: 10) [15:40:51 -16646.746603] AUTODETECT spr round 3 (radius: 15) [15:42:20 -12217.539397] AUTODETECT spr round 4 (radius: 20) [15:43:52 -10563.727260] AUTODETECT spr round 5 (radius: 25) [15:45:33 -9476.209742] SPR radius for FAST iterations: 25 (autodetect) [15:45:33 -9476.209742] Model parameter optimization (eps = 3.000000) [15:45:47 -9461.107776] FAST spr round 1 (radius: 25) [15:47:09 -7605.398606] FAST spr round 2 (radius: 25) [15:48:24 -6880.635078] FAST spr round 3 (radius: 25) [15:49:37 -6698.980860] FAST spr round 4 (radius: 25) [15:50:49 -6675.246292] FAST spr round 5 (radius: 25) [15:52:01 -6656.573074] FAST spr round 6 (radius: 25) [15:53:13 -6635.301259] FAST spr round 7 (radius: 25) [15:54:24 -6635.301240] Model parameter optimization (eps = 1.000000) [15:54:34 -6634.238573] SLOW spr round 1 (radius: 5) [15:55:48 -6630.361306] SLOW spr round 2 (radius: 5) [15:57:02 -6630.097014] SLOW spr round 3 (radius: 5) [15:58:14 -6630.096964] SLOW spr round 4 (radius: 10) [15:59:33 -6569.456425] SLOW spr round 5 (radius: 5) [16:00:51 -6564.896278] SLOW spr round 6 (radius: 5) [16:02:03 -6564.895780] SLOW spr round 7 (radius: 10) [16:03:20 -6564.895728] SLOW spr round 8 (radius: 15) [16:04:52 -6522.501283] SLOW spr round 9 (radius: 5) [16:06:12 -6518.149990] SLOW spr round 10 (radius: 5) [16:07:24 -6518.149400] SLOW spr round 11 (radius: 10) [16:08:40 -6512.724136] SLOW spr round 12 (radius: 5) [16:09:54 -6512.724132] SLOW spr round 13 (radius: 10) [16:11:11 -6512.724132] SLOW spr round 14 (radius: 15) [16:12:43 -6483.585483] SLOW spr round 15 (radius: 5) [16:14:03 -6475.600796] SLOW spr round 16 (radius: 5) [16:15:14 -6475.599861] SLOW spr round 17 (radius: 10) [16:16:30 -6472.921101] SLOW spr round 18 (radius: 5) [16:17:45 -6472.920934] SLOW spr round 19 (radius: 10) [16:19:01 -6472.920834] SLOW spr round 20 (radius: 15) [16:20:30 -6472.920762] SLOW spr round 21 (radius: 20) [16:22:29 -6468.702182] SLOW spr round 22 (radius: 5) [16:23:48 -6468.668402] SLOW spr round 23 (radius: 10) [16:25:07 -6466.595796] SLOW spr round 24 (radius: 5) [16:26:22 -6465.167543] SLOW spr round 25 (radius: 5) [16:27:33 -6465.167407] SLOW spr round 26 (radius: 10) [16:28:49 -6465.167393] SLOW spr round 27 (radius: 15) [16:30:18 -6465.167391] SLOW spr round 28 (radius: 20) [16:32:17 -6465.167390] SLOW spr round 29 (radius: 25) [16:34:25 -6390.926398] SLOW spr round 30 (radius: 5) [16:35:48 -6315.094123] SLOW spr round 31 (radius: 5) [16:37:01 -6314.932990] SLOW spr round 32 (radius: 5) [16:38:11 -6314.932778] SLOW spr round 33 (radius: 10) [16:39:26 -6313.039731] SLOW spr round 34 (radius: 5) [16:40:40 -6313.039502] SLOW spr round 35 (radius: 10) [16:41:56 -6313.039403] SLOW spr round 36 (radius: 15) [16:43:29 -6297.299407] SLOW spr round 37 (radius: 5) [16:44:47 -6297.299356] SLOW spr round 38 (radius: 10) [16:46:04 -6296.203471] SLOW spr round 39 (radius: 5) [16:47:18 -6296.203469] SLOW spr round 40 (radius: 10) [16:48:34 -6296.203467] SLOW spr round 41 (radius: 15) [16:50:03 -6296.203466] SLOW spr round 42 (radius: 20) [16:52:02 -6296.203465] SLOW spr round 43 (radius: 25) [16:54:08 -6296.203464] Model parameter optimization (eps = 0.100000) [16:54:13] ML tree search #13, logLikelihood: -6296.137316 [16:54:13 -69670.075395] Initial branch length optimization [16:54:15 -54506.561299] Model parameter optimization (eps = 10.000000) [16:54:39 -53967.385195] AUTODETECT spr round 1 (radius: 5) [16:56:02 -28729.963532] AUTODETECT spr round 2 (radius: 10) [16:57:32 -18421.057474] AUTODETECT spr round 3 (radius: 15) [16:59:00 -13784.837433] AUTODETECT spr round 4 (radius: 20) [17:00:31 -11967.853912] AUTODETECT spr round 5 (radius: 25) [17:02:08 -10303.407696] SPR radius for FAST iterations: 25 (autodetect) [17:02:08 -10303.407696] Model parameter optimization (eps = 3.000000) [17:02:29 -10203.317395] FAST spr round 1 (radius: 25) [17:03:53 -7404.117096] FAST spr round 2 (radius: 25) [17:05:09 -6664.823575] FAST spr round 3 (radius: 25) [17:06:26 -6507.365248] FAST spr round 4 (radius: 25) [17:07:42 -6488.289667] FAST spr round 5 (radius: 25) [17:08:56 -6480.815959] FAST spr round 6 (radius: 25) [17:10:08 -6480.815674] Model parameter optimization (eps = 1.000000) [17:10:22 -6479.264042] SLOW spr round 1 (radius: 5) [17:11:36 -6478.284365] SLOW spr round 2 (radius: 5) [17:12:49 -6478.283961] SLOW spr round 3 (radius: 10) [17:14:08 -6466.351593] SLOW spr round 4 (radius: 5) [17:15:27 -6460.825570] SLOW spr round 5 (radius: 5) [17:16:41 -6459.360271] SLOW spr round 6 (radius: 5) [17:17:54 -6459.207514] SLOW spr round 7 (radius: 5) [17:19:07 -6459.124091] SLOW spr round 8 (radius: 10) [17:20:25 -6458.027109] SLOW spr round 9 (radius: 5) [17:21:42 -6458.026016] SLOW spr round 10 (radius: 10) [17:23:00 -6457.649818] SLOW spr round 11 (radius: 5) [17:24:17 -6457.026005] SLOW spr round 12 (radius: 5) [17:25:29 -6457.023764] SLOW spr round 13 (radius: 10) [17:26:47 -6455.810060] SLOW spr round 14 (radius: 5) [17:28:02 -6455.808736] SLOW spr round 15 (radius: 10) [17:29:20 -6455.807712] SLOW spr round 16 (radius: 15) [17:30:52 -6449.793048] SLOW spr round 17 (radius: 5) [17:32:13 -6449.213313] SLOW spr round 18 (radius: 5) [17:33:26 -6449.113939] SLOW spr round 19 (radius: 10) [17:34:44 -6449.113743] SLOW spr round 20 (radius: 15) [17:36:14 -6447.831849] SLOW spr round 21 (radius: 5) [17:37:37 -6411.174902] SLOW spr round 22 (radius: 5) [17:38:52 -6411.158231] SLOW spr round 23 (radius: 10) [17:40:09 -6411.158159] SLOW spr round 24 (radius: 15) [17:41:37 -6411.158153] SLOW spr round 25 (radius: 20) [17:43:29 -6398.835096] SLOW spr round 26 (radius: 5) [17:44:53 -6395.250051] SLOW spr round 27 (radius: 5) [17:46:07 -6395.249925] SLOW spr round 28 (radius: 10) [17:47:25 -6395.101827] SLOW spr round 29 (radius: 5) [17:48:43 -6395.041157] SLOW spr round 30 (radius: 10) [17:50:01 -6395.040882] SLOW spr round 31 (radius: 15) [17:51:33 -6395.040653] SLOW spr round 32 (radius: 20) [17:53:32 -6395.040463] SLOW spr round 33 (radius: 25) [17:55:48 -6395.040304] Model parameter optimization (eps = 0.100000) [17:55:53] ML tree search #14, logLikelihood: -6394.969054 [17:55:53 -70317.679495] Initial branch length optimization [17:55:55 -55477.955175] Model parameter optimization (eps = 10.000000) [17:56:25 -54961.983443] AUTODETECT spr round 1 (radius: 5) [17:57:51 -29786.051987] AUTODETECT spr round 2 (radius: 10) [17:59:25 -18239.917408] AUTODETECT spr round 3 (radius: 15) [18:00:52 -13458.942936] AUTODETECT spr round 4 (radius: 20) [18:02:28 -10294.297389] AUTODETECT spr round 5 (radius: 25) [18:04:11 -8410.134471] SPR radius for FAST iterations: 25 (autodetect) [18:04:11 -8410.134471] Model parameter optimization (eps = 3.000000) [18:04:30 -8376.525030] FAST spr round 1 (radius: 25) [18:05:51 -6593.753958] FAST spr round 2 (radius: 25) [18:07:08 -6445.643983] FAST spr round 3 (radius: 25) [18:08:25 -6426.365629] FAST spr round 4 (radius: 25) [18:09:41 -6413.075304] FAST spr round 5 (radius: 25) [18:10:55 -6413.061978] Model parameter optimization (eps = 1.000000) [18:11:09 -6410.957633] SLOW spr round 1 (radius: 5) [18:12:23 -6408.494322] SLOW spr round 2 (radius: 5) [18:13:38 -6323.310708] SLOW spr round 3 (radius: 5) [18:14:50 -6320.449692] SLOW spr round 4 (radius: 5) [18:16:04 -6320.283296] SLOW spr round 5 (radius: 5) [18:17:17 -6320.281289] SLOW spr round 6 (radius: 10) [18:18:37 -6314.595758] SLOW spr round 7 (radius: 5) [18:19:55 -6314.193287] SLOW spr round 8 (radius: 5) [18:21:09 -6314.192752] SLOW spr round 9 (radius: 10) [18:22:28 -6308.186717] SLOW spr round 10 (radius: 5) [18:23:46 -6304.388654] SLOW spr round 11 (radius: 5) [18:24:59 -6304.184023] SLOW spr round 12 (radius: 5) [18:26:10 -6304.182693] SLOW spr round 13 (radius: 10) [18:27:28 -6304.182087] SLOW spr round 14 (radius: 15) [18:29:05 -6269.920745] SLOW spr round 15 (radius: 5) [18:30:26 -6262.164059] SLOW spr round 16 (radius: 5) [18:31:41 -6261.766357] SLOW spr round 17 (radius: 5) [18:32:53 -6261.766210] SLOW spr round 18 (radius: 10) [18:34:09 -6261.420414] SLOW spr round 19 (radius: 5) [18:35:24 -6261.420367] SLOW spr round 20 (radius: 10) [18:36:40 -6261.420350] SLOW spr round 21 (radius: 15) [18:38:13 -6260.979943] SLOW spr round 22 (radius: 5) [18:39:32 -6260.979850] SLOW spr round 23 (radius: 10) [18:40:51 -6260.979799] SLOW spr round 24 (radius: 15) [18:42:21 -6260.979783] SLOW spr round 25 (radius: 20) [18:44:20 -6255.899014] SLOW spr round 26 (radius: 5) [18:45:41 -6255.897536] SLOW spr round 27 (radius: 10) [18:46:58 -6255.897448] SLOW spr round 28 (radius: 15) [18:48:30 -6251.685253] SLOW spr round 29 (radius: 5) [18:49:50 -6251.593560] SLOW spr round 30 (radius: 10) [18:51:08 -6251.561736] SLOW spr round 31 (radius: 15) [18:52:37 -6251.559849] SLOW spr round 32 (radius: 20) [18:54:37 -6251.472673] SLOW spr round 33 (radius: 25) [18:56:54 -6251.472361] Model parameter optimization (eps = 0.100000) [18:57:06] ML tree search #15, logLikelihood: -6251.026437 [18:57:07 -69688.470931] Initial branch length optimization [18:57:08 -54071.600737] Model parameter optimization (eps = 10.000000) [18:57:31 -53390.776762] AUTODETECT spr round 1 (radius: 5) [18:58:53 -28901.900219] AUTODETECT spr round 2 (radius: 10) [19:00:21 -18612.680066] AUTODETECT spr round 3 (radius: 15) [19:01:52 -12231.800592] AUTODETECT spr round 4 (radius: 20) [19:03:27 -9645.397467] AUTODETECT spr round 5 (radius: 25) [19:05:03 -8662.373709] SPR radius for FAST iterations: 25 (autodetect) [19:05:03 -8662.373709] Model parameter optimization (eps = 3.000000) [19:05:21 -8592.800748] FAST spr round 1 (radius: 25) [19:06:44 -6558.797201] FAST spr round 2 (radius: 25) [19:08:01 -6409.302286] FAST spr round 3 (radius: 25) [19:09:16 -6403.273262] FAST spr round 4 (radius: 25) [19:10:31 -6382.309645] FAST spr round 5 (radius: 25) [19:11:43 -6382.307798] Model parameter optimization (eps = 1.000000) [19:11:50 -6382.032092] SLOW spr round 1 (radius: 5) [19:13:03 -6380.916667] SLOW spr round 2 (radius: 5) [19:14:16 -6380.905641] SLOW spr round 3 (radius: 10) [19:15:33 -6372.712510] SLOW spr round 4 (radius: 5) [19:16:51 -6368.639951] SLOW spr round 5 (radius: 5) [19:18:05 -6368.639525] SLOW spr round 6 (radius: 10) [19:19:24 -6366.634626] SLOW spr round 7 (radius: 5) [19:20:41 -6366.634378] SLOW spr round 8 (radius: 10) [19:22:00 -6366.634165] SLOW spr round 9 (radius: 15) [19:23:33 -6365.633516] SLOW spr round 10 (radius: 5) [19:24:55 -6363.095943] SLOW spr round 11 (radius: 5) [19:26:10 -6363.095852] SLOW spr round 12 (radius: 10) [19:27:29 -6363.095762] SLOW spr round 13 (radius: 15) [19:28:59 -6363.095714] SLOW spr round 14 (radius: 20) [19:30:46 -6362.784320] SLOW spr round 15 (radius: 5) [19:32:09 -6362.783951] SLOW spr round 16 (radius: 10) [19:33:29 -6362.483731] SLOW spr round 17 (radius: 5) [19:34:46 -6362.480001] SLOW spr round 18 (radius: 10) [19:36:03 -6362.479945] SLOW spr round 19 (radius: 15) [19:37:34 -6306.753382] SLOW spr round 20 (radius: 5) [19:38:54 -6306.752448] SLOW spr round 21 (radius: 10) [19:40:11 -6306.752324] SLOW spr round 22 (radius: 15) [19:41:41 -6306.180212] SLOW spr round 23 (radius: 5) [19:43:00 -6306.178598] SLOW spr round 24 (radius: 10) [19:44:17 -6306.178483] SLOW spr round 25 (radius: 15) [19:45:46 -6306.178449] SLOW spr round 26 (radius: 20) [19:47:36 -6306.178427] SLOW spr round 27 (radius: 25) [19:49:30 -6302.195497] SLOW spr round 28 (radius: 5) [19:50:49 -6302.195466] SLOW spr round 29 (radius: 10) [19:52:07 -6302.195446] SLOW spr round 30 (radius: 15) [19:53:36 -6302.195421] SLOW spr round 31 (radius: 20) [19:55:25 -6302.195407] SLOW spr round 32 (radius: 25) [19:57:18 -6302.195398] Model parameter optimization (eps = 0.100000) [19:57:26] ML tree search #16, logLikelihood: -6302.040774 [19:57:26 -69660.092016] Initial branch length optimization [19:57:28 -54508.773014] Model parameter optimization (eps = 10.000000) [19:57:47 -54061.746907] AUTODETECT spr round 1 (radius: 5) [19:59:13 -29004.205665] AUTODETECT spr round 2 (radius: 10) [20:00:46 -17544.002839] AUTODETECT spr round 3 (radius: 15) [20:02:11 -13058.161696] AUTODETECT spr round 4 (radius: 20) [20:03:46 -10396.963835] AUTODETECT spr round 5 (radius: 25) [20:05:22 -9248.793816] SPR radius for FAST iterations: 25 (autodetect) [20:05:22 -9248.793816] Model parameter optimization (eps = 3.000000) [20:05:36 -9223.575742] FAST spr round 1 (radius: 25) [20:06:54 -7454.115273] FAST spr round 2 (radius: 25) [20:08:06 -7055.167465] FAST spr round 3 (radius: 25) [20:09:16 -6674.960619] FAST spr round 4 (radius: 25) [20:10:29 -6648.671368] FAST spr round 5 (radius: 25) [20:11:43 -6585.625598] FAST spr round 6 (radius: 25) [20:12:56 -6496.171041] FAST spr round 7 (radius: 25) [20:14:11 -6387.547809] FAST spr round 8 (radius: 25) [20:15:22 -6387.098614] FAST spr round 9 (radius: 25) [20:16:33 -6387.098562] Model parameter optimization (eps = 1.000000) [20:16:46 -6384.956317] SLOW spr round 1 (radius: 5) [20:17:58 -6383.787331] SLOW spr round 2 (radius: 5) [20:19:08 -6383.787015] SLOW spr round 3 (radius: 10) [20:20:24 -6296.025337] SLOW spr round 4 (radius: 5) [20:21:42 -6265.839035] SLOW spr round 5 (radius: 5) [20:22:55 -6264.698286] SLOW spr round 6 (radius: 5) [20:24:05 -6264.698065] SLOW spr round 7 (radius: 10) [20:25:24 -6233.917184] SLOW spr round 8 (radius: 5) [20:26:41 -6231.371426] SLOW spr round 9 (radius: 5) [20:27:52 -6231.135085] SLOW spr round 10 (radius: 5) [20:29:02 -6231.135082] SLOW spr round 11 (radius: 10) [20:30:18 -6224.733972] SLOW spr round 12 (radius: 5) [20:31:34 -6220.293923] SLOW spr round 13 (radius: 5) [20:32:44 -6220.293897] SLOW spr round 14 (radius: 10) [20:34:00 -6220.293896] SLOW spr round 15 (radius: 15) [20:35:34 -6217.725860] SLOW spr round 16 (radius: 5) [20:36:53 -6217.725851] SLOW spr round 17 (radius: 10) [20:38:10 -6217.368102] SLOW spr round 18 (radius: 5) [20:39:25 -6217.353459] SLOW spr round 19 (radius: 10) [20:40:42 -6217.353449] SLOW spr round 20 (radius: 15) [20:42:15 -6215.814878] SLOW spr round 21 (radius: 5) [20:43:34 -6215.008723] SLOW spr round 22 (radius: 5) [20:44:46 -6215.008617] SLOW spr round 23 (radius: 10) [20:46:01 -6215.008617] SLOW spr round 24 (radius: 15) [20:47:35 -6215.008617] SLOW spr round 25 (radius: 20) [20:49:37 -6214.214890] SLOW spr round 26 (radius: 5) [20:50:57 -6204.053359] SLOW spr round 27 (radius: 5) [20:52:08 -6204.053359] SLOW spr round 28 (radius: 10) [20:53:24 -6204.053341] SLOW spr round 29 (radius: 15) [20:54:57 -6204.053341] SLOW spr round 30 (radius: 20) [20:56:57 -6204.053332] SLOW spr round 31 (radius: 25) [20:59:09 -6125.015352] SLOW spr round 32 (radius: 5) [21:00:31 -6106.576244] SLOW spr round 33 (radius: 5) [21:01:43 -6106.575719] SLOW spr round 34 (radius: 10) [21:02:59 -6101.477403] SLOW spr round 35 (radius: 5) [21:04:13 -6101.477402] SLOW spr round 36 (radius: 10) [21:05:29 -6101.477402] SLOW spr round 37 (radius: 15) [21:07:02 -6100.175102] SLOW spr round 38 (radius: 5) [21:08:20 -6100.174976] SLOW spr round 39 (radius: 10) [21:09:37 -6100.174975] SLOW spr round 40 (radius: 15) [21:11:09 -6099.892178] SLOW spr round 41 (radius: 5) [21:12:27 -6099.892146] SLOW spr round 42 (radius: 10) [21:13:44 -6099.892145] SLOW spr round 43 (radius: 15) [21:15:15 -6099.892145] SLOW spr round 44 (radius: 20) [21:17:11 -6099.892145] SLOW spr round 45 (radius: 25) [21:19:19 -6099.892145] Model parameter optimization (eps = 0.100000) [21:19:30] ML tree search #17, logLikelihood: -6099.596716 [21:19:30 -69140.166740] Initial branch length optimization [21:19:31 -54015.862886] Model parameter optimization (eps = 10.000000) [21:19:57 -53399.935886] AUTODETECT spr round 1 (radius: 5) [21:21:18 -28249.857181] AUTODETECT spr round 2 (radius: 10) [21:22:45 -17716.809424] AUTODETECT spr round 3 (radius: 15) [21:24:11 -12550.596838] AUTODETECT spr round 4 (radius: 20) [21:25:42 -10227.308282] AUTODETECT spr round 5 (radius: 25) [21:27:20 -9108.059476] SPR radius for FAST iterations: 25 (autodetect) [21:27:20 -9108.059476] Model parameter optimization (eps = 3.000000) [21:27:41 -9017.761718] FAST spr round 1 (radius: 25) [21:29:02 -7262.504351] FAST spr round 2 (radius: 25) [21:30:18 -6917.610703] FAST spr round 3 (radius: 25) [21:31:32 -6761.123499] FAST spr round 4 (radius: 25) [21:32:45 -6722.127831] FAST spr round 5 (radius: 25) [21:33:55 -6722.115786] Model parameter optimization (eps = 1.000000) [21:34:05 -6720.761935] SLOW spr round 1 (radius: 5) [21:35:18 -6709.413184] SLOW spr round 2 (radius: 5) [21:36:30 -6707.267831] SLOW spr round 3 (radius: 5) [21:37:41 -6707.267782] SLOW spr round 4 (radius: 10) [21:38:57 -6705.224619] SLOW spr round 5 (radius: 5) [21:40:13 -6704.437362] SLOW spr round 6 (radius: 5) [21:41:24 -6704.437357] SLOW spr round 7 (radius: 10) [21:42:39 -6704.437355] SLOW spr round 8 (radius: 15) [21:44:10 -6699.819889] SLOW spr round 9 (radius: 5) [21:45:29 -6699.819821] SLOW spr round 10 (radius: 10) [21:46:46 -6699.686109] SLOW spr round 11 (radius: 5) [21:48:00 -6699.686108] SLOW spr round 12 (radius: 10) [21:49:16 -6699.686108] SLOW spr round 13 (radius: 15) [21:50:46 -6699.041151] SLOW spr round 14 (radius: 5) [21:52:05 -6699.041148] SLOW spr round 15 (radius: 10) [21:53:21 -6699.041148] SLOW spr round 16 (radius: 15) [21:54:51 -6699.041148] SLOW spr round 17 (radius: 20) [21:56:43 -6631.861448] SLOW spr round 18 (radius: 5) [21:58:05 -6618.338651] SLOW spr round 19 (radius: 5) [21:59:19 -6617.863560] SLOW spr round 20 (radius: 5) [22:00:30 -6617.863449] SLOW spr round 21 (radius: 10) [22:01:47 -6615.875626] SLOW spr round 22 (radius: 5) [22:03:02 -6615.742519] SLOW spr round 23 (radius: 5) [22:04:13 -6615.741618] SLOW spr round 24 (radius: 10) [22:05:29 -6615.741599] SLOW spr round 25 (radius: 15) [22:07:00 -6615.707823] SLOW spr round 26 (radius: 20) [22:08:48 -6615.659788] SLOW spr round 27 (radius: 25) [22:10:51 -6523.876301] SLOW spr round 28 (radius: 5) [22:12:14 -6471.467754] SLOW spr round 29 (radius: 5) [22:13:31 -6401.486407] SLOW spr round 30 (radius: 5) [22:14:44 -6399.419490] SLOW spr round 31 (radius: 5) [22:15:57 -6365.399996] SLOW spr round 32 (radius: 5) [22:17:08 -6365.399183] SLOW spr round 33 (radius: 10) [22:18:25 -6365.399129] SLOW spr round 34 (radius: 15) [22:19:53 -6365.399118] SLOW spr round 35 (radius: 20) [22:21:45 -6233.858556] SLOW spr round 36 (radius: 5) [22:23:08 -6182.828940] SLOW spr round 37 (radius: 5) [22:24:23 -6182.737600] SLOW spr round 38 (radius: 10) [22:25:40 -6182.678070] SLOW spr round 39 (radius: 15) [22:27:10 -6182.205635] SLOW spr round 40 (radius: 5) [22:28:31 -6180.092820] SLOW spr round 41 (radius: 5) [22:29:44 -6180.092501] SLOW spr round 42 (radius: 10) [22:31:01 -6180.092266] SLOW spr round 43 (radius: 15) [22:32:30 -6180.092089] SLOW spr round 44 (radius: 20) [22:34:24 -6173.314926] SLOW spr round 45 (radius: 5) [22:35:45 -6172.746797] SLOW spr round 46 (radius: 5) [22:36:58 -6172.746293] SLOW spr round 47 (radius: 10) [22:38:15 -6172.746204] SLOW spr round 48 (radius: 15) [22:39:44 -6172.746144] SLOW spr round 49 (radius: 20) [22:41:34 -6172.746098] SLOW spr round 50 (radius: 25) [22:43:45 -6163.496896] SLOW spr round 51 (radius: 5) [22:45:08 -6135.119896] SLOW spr round 52 (radius: 5) [22:46:23 -6091.135025] SLOW spr round 53 (radius: 5) [22:47:35 -6046.515128] SLOW spr round 54 (radius: 5) [22:48:48 -6032.805380] SLOW spr round 55 (radius: 5) [22:49:58 -6032.803778] SLOW spr round 56 (radius: 10) [22:51:14 -5993.499519] SLOW spr round 57 (radius: 5) [22:52:28 -5993.499044] SLOW spr round 58 (radius: 10) [22:53:45 -5991.201900] SLOW spr round 59 (radius: 5) [22:54:57 -5991.201856] SLOW spr round 60 (radius: 10) [22:56:13 -5991.201855] SLOW spr round 61 (radius: 15) [22:57:39 -5990.732497] SLOW spr round 62 (radius: 5) [22:58:57 -5990.732497] SLOW spr round 63 (radius: 10) [23:00:14 -5990.732497] SLOW spr round 64 (radius: 15) [23:01:38 -5990.732497] SLOW spr round 65 (radius: 20) [23:03:31 -5990.732497] SLOW spr round 66 (radius: 25) [23:05:39 -5990.732497] Model parameter optimization (eps = 0.100000) [23:05:51] ML tree search #18, logLikelihood: -5989.619876 [23:05:51 -70340.089870] Initial branch length optimization [23:05:52 -54940.454239] Model parameter optimization (eps = 10.000000) [23:06:26 -54374.493120] AUTODETECT spr round 1 (radius: 5) [23:07:53 -29281.247211] AUTODETECT spr round 2 (radius: 10) [23:09:22 -17491.112115] AUTODETECT spr round 3 (radius: 15) [23:10:47 -12320.369787] AUTODETECT spr round 4 (radius: 20) [23:12:15 -10673.947630] AUTODETECT spr round 5 (radius: 25) [23:13:54 -9131.363249] SPR radius for FAST iterations: 25 (autodetect) [23:13:54 -9131.363249] Model parameter optimization (eps = 3.000000) [23:14:22 -9049.971539] FAST spr round 1 (radius: 25) [23:15:44 -6970.085499] FAST spr round 2 (radius: 25) [23:16:57 -6550.576772] FAST spr round 3 (radius: 25) [23:18:09 -6382.644035] FAST spr round 4 (radius: 25) [23:19:25 -6342.388195] FAST spr round 5 (radius: 25) [23:20:38 -6319.476513] FAST spr round 6 (radius: 25) [23:21:52 -6307.495652] FAST spr round 7 (radius: 25) [23:23:03 -6307.495599] Model parameter optimization (eps = 1.000000) [23:23:16 -6305.920914] SLOW spr round 1 (radius: 5) [23:24:28 -6305.330462] SLOW spr round 2 (radius: 5) [23:25:39 -6305.330415] SLOW spr round 3 (radius: 10) [23:26:56 -6288.411298] SLOW spr round 4 (radius: 5) [23:28:12 -6127.850815] SLOW spr round 5 (radius: 5) [23:29:25 -6110.943910] SLOW spr round 6 (radius: 5) [23:30:37 -6105.368152] SLOW spr round 7 (radius: 5) [23:31:47 -6105.368145] SLOW spr round 8 (radius: 10) [23:33:03 -6105.368145] SLOW spr round 9 (radius: 15) [23:34:27 -6103.076739] SLOW spr round 10 (radius: 5) [23:35:46 -6103.074312] SLOW spr round 11 (radius: 10) [23:37:04 -6097.822314] SLOW spr round 12 (radius: 5) [23:38:18 -6097.822245] SLOW spr round 13 (radius: 10) [23:39:35 -6097.822245] SLOW spr round 14 (radius: 15) [23:40:59 -6097.822245] SLOW spr round 15 (radius: 20) [23:42:42 -6097.012136] SLOW spr round 16 (radius: 5) [23:44:03 -6096.411416] SLOW spr round 17 (radius: 5) [23:45:16 -6096.411416] SLOW spr round 18 (radius: 10) [23:46:33 -6096.411416] SLOW spr round 19 (radius: 15) [23:47:57 -6096.411416] SLOW spr round 20 (radius: 20) [23:49:36 -6096.411416] SLOW spr round 21 (radius: 25) [23:51:28 -6083.536569] SLOW spr round 22 (radius: 5) [23:52:51 -6082.845731] SLOW spr round 23 (radius: 5) [23:54:07 -6082.844441] SLOW spr round 24 (radius: 10) [23:55:24 -6081.559996] SLOW spr round 25 (radius: 5) [23:56:38 -6081.559994] SLOW spr round 26 (radius: 10) [23:57:55 -6081.559994] SLOW spr round 27 (radius: 15) [23:59:19 -6081.559994] SLOW spr round 28 (radius: 20) [24:01:02 -6081.559994] SLOW spr round 29 (radius: 25) [24:02:56 -6081.559994] Model parameter optimization (eps = 0.100000) [24:03:04] ML tree search #19, logLikelihood: -6081.443419 [24:03:04 -69521.188997] Initial branch length optimization [24:03:05 -54363.745803] Model parameter optimization (eps = 10.000000) [24:03:41 -53911.162061] AUTODETECT spr round 1 (radius: 5) [24:05:03 -29794.383463] AUTODETECT spr round 2 (radius: 10) [24:06:38 -18514.525208] AUTODETECT spr round 3 (radius: 15) [24:08:07 -12993.218136] AUTODETECT spr round 4 (radius: 20) [24:09:36 -10704.909069] AUTODETECT spr round 5 (radius: 25) [24:11:09 -9506.109106] SPR radius for FAST iterations: 25 (autodetect) [24:11:09 -9506.109106] Model parameter optimization (eps = 3.000000) [24:11:30 -9426.925893] FAST spr round 1 (radius: 25) [24:12:55 -7113.262485] FAST spr round 2 (radius: 25) [24:14:14 -6615.871600] FAST spr round 3 (radius: 25) [24:15:32 -6442.528049] FAST spr round 4 (radius: 25) [24:16:48 -6431.902787] FAST spr round 5 (radius: 25) [24:18:00 -6431.901111] Model parameter optimization (eps = 1.000000) [24:18:14 -6427.255125] SLOW spr round 1 (radius: 5) [24:19:26 -6425.302027] SLOW spr round 2 (radius: 5) [24:20:38 -6425.299321] SLOW spr round 3 (radius: 10) [24:21:58 -6336.053522] SLOW spr round 4 (radius: 5) [24:23:15 -6261.591644] SLOW spr round 5 (radius: 5) [24:24:28 -6260.671416] SLOW spr round 6 (radius: 5) [24:25:41 -6260.669329] SLOW spr round 7 (radius: 10) [24:27:01 -6260.355535] SLOW spr round 8 (radius: 5) [24:28:20 -6260.355000] SLOW spr round 9 (radius: 10) [24:29:41 -6260.354761] SLOW spr round 10 (radius: 15) [24:31:12 -6205.177882] SLOW spr round 11 (radius: 5) [24:32:34 -6197.272531] SLOW spr round 12 (radius: 5) [24:33:48 -6197.270827] SLOW spr round 13 (radius: 10) [24:35:08 -6197.270431] SLOW spr round 14 (radius: 15) [24:36:39 -6196.206189] SLOW spr round 15 (radius: 5) [24:37:59 -6196.204307] SLOW spr round 16 (radius: 10) [24:39:18 -6196.204215] SLOW spr round 17 (radius: 15) [24:40:47 -6196.204167] SLOW spr round 18 (radius: 20) [24:42:37 -6194.376659] SLOW spr round 19 (radius: 5) [24:43:56 -6194.376367] SLOW spr round 20 (radius: 10) [24:45:16 -6190.430759] SLOW spr round 21 (radius: 5) [24:46:30 -6190.353098] SLOW spr round 22 (radius: 10) [24:47:47 -6190.351924] SLOW spr round 23 (radius: 15) [24:49:13 -6190.351001] SLOW spr round 24 (radius: 20) [24:51:02 -6189.059346] SLOW spr round 25 (radius: 5) [24:52:21 -6189.057754] SLOW spr round 26 (radius: 10) [24:53:41 -6188.844704] SLOW spr round 27 (radius: 5) [24:54:56 -6188.844109] SLOW spr round 28 (radius: 10) [24:56:15 -6188.843867] SLOW spr round 29 (radius: 15) [24:57:41 -6188.684621] SLOW spr round 30 (radius: 5) [24:59:00 -6188.509897] SLOW spr round 31 (radius: 5) [25:00:14 -6188.509722] SLOW spr round 32 (radius: 10) [25:01:39 -6188.509646] SLOW spr round 33 (radius: 15) [25:03:04 -6188.509589] SLOW spr round 34 (radius: 20) [25:04:55 -6186.094017] SLOW spr round 35 (radius: 5) [25:06:17 -6185.238198] SLOW spr round 36 (radius: 5) [25:07:32 -6185.237729] SLOW spr round 37 (radius: 10) [25:08:50 -6185.237682] SLOW spr round 38 (radius: 15) [25:10:16 -6185.237667] SLOW spr round 39 (radius: 20) [25:12:08 -6185.237657] SLOW spr round 40 (radius: 25) [25:14:16 -6111.634605] SLOW spr round 41 (radius: 5) [25:15:41 -6088.108745] SLOW spr round 42 (radius: 5) [25:16:56 -6081.945720] SLOW spr round 43 (radius: 5) [25:18:09 -6081.945707] SLOW spr round 44 (radius: 10) [25:19:27 -6079.672360] SLOW spr round 45 (radius: 5) [25:20:45 -6078.822172] SLOW spr round 46 (radius: 5) [25:21:58 -6078.821242] SLOW spr round 47 (radius: 10) [25:23:16 -6078.821197] SLOW spr round 48 (radius: 15) [25:24:43 -6075.019779] SLOW spr round 49 (radius: 5) [25:26:05 -6073.164859] SLOW spr round 50 (radius: 5) [25:27:19 -6073.164232] SLOW spr round 51 (radius: 10) [25:28:37 -6073.164221] SLOW spr round 52 (radius: 15) [25:30:05 -6072.885312] SLOW spr round 53 (radius: 5) [25:31:25 -6072.885264] SLOW spr round 54 (radius: 10) [25:32:51 -6072.885258] SLOW spr round 55 (radius: 15) [25:34:18 -6072.885252] SLOW spr round 56 (radius: 20) [25:36:14 -6070.599033] SLOW spr round 57 (radius: 5) [25:37:38 -6065.557309] SLOW spr round 58 (radius: 5) [25:38:51 -6065.048730] SLOW spr round 59 (radius: 5) [25:40:03 -6065.048653] SLOW spr round 60 (radius: 10) [25:41:21 -6065.048649] SLOW spr round 61 (radius: 15) [25:42:52 -6065.048643] SLOW spr round 62 (radius: 20) [25:44:51 -6065.048638] SLOW spr round 63 (radius: 25) [25:47:09 -5997.210398] SLOW spr round 64 (radius: 5) [25:48:33 -5996.432848] SLOW spr round 65 (radius: 5) [25:49:46 -5996.432835] SLOW spr round 66 (radius: 10) [25:51:05 -5996.432832] SLOW spr round 67 (radius: 15) [25:52:33 -5996.432824] SLOW spr round 68 (radius: 20) [25:54:31 -5996.432817] SLOW spr round 69 (radius: 25) [25:56:47 -5996.432816] Model parameter optimization (eps = 0.100000) [25:56:59] ML tree search #20, logLikelihood: -5995.136105 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.317190,0.215089) (0.348897,0.254071) (0.184052,1.407730) (0.149861,3.897184) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -5982.319808 AIC score: 15970.639616 / AICc score: 8043994.639616 / BIC score: 20165.611774 Free parameters (model + branch lengths): 2003 WARNING: Number of free parameters (K=2003) is larger than alignment size (n=60). This might lead to overfitting and compromise tree inference results! Best ML tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/3_mltree/Q9UD57.raxml.bestTree All ML trees saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/3_mltree/Q9UD57.raxml.mlTrees Optimized model saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/3_mltree/Q9UD57.raxml.bestModel Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/Q9UD57/3_mltree/Q9UD57.raxml.log Analysis started: 13-Jul-2021 15:23:36 / finished: 14-Jul-2021 17:20:36 Elapsed time: 93420.200 seconds