RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 02-Jun-2021 17:56:22 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/2_msa/Q9NYL2_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/3_mltree/Q9NYL2.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/4_raxmlng_ancestral/Q9NYL2 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622645782 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/2_msa/Q9NYL2_nogap_msa.fasta [00:00:00] Loaded alignment with 996 taxa and 800 sites WARNING: Sequences tr_D8RMM2_D8RMM2_SELML_88036 and tr_D8SLQ7_D8SLQ7_SELML_88036 are exactly identical! WARNING: Sequences tr_D8SD04_D8SD04_SELML_88036 and tr_D8SH64_D8SH64_SELML_88036 are exactly identical! WARNING: Sequences tr_G3R7Y7_G3R7Y7_GORGO_9595 and tr_H2Q439_H2Q439_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R7Y7_G3R7Y7_GORGO_9595 and sp_Q16584_M3K11_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2NHH3_H2NHH3_PONAB_9601 and sp_Q12852_M3K12_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2Q8J6_H2Q8J6_PANTR_9598 and tr_A0A2R8ZZF8_A0A2R8ZZF8_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QGC0_H2QGC0_PANTR_9598 and sp_Q02779_M3K10_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2QIZ7_H2QIZ7_PANTR_9598 and tr_A0A2R8Z627_A0A2R8Z627_PANPA_9597 are exactly identical! WARNING: Sequences tr_K7A4U9_K7A4U9_PANTR_9598 and tr_A0A2R9C1I8_A0A2R9C1I8_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A3B5QT32_A0A3B5QT32_XIPMA_8083 and tr_A0A087XQE7_A0A087XQE7_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A0E0HLC2_A0A0E0HLC2_ORYNI_4536 and tr_I1P467_I1P467_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0HLC2_A0A0E0HLC2_ORYNI_4536 and tr_A0A0E0NKV4_A0A0E0NKV4_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0HLC2_A0A0E0HLC2_ORYNI_4536 and tr_A0A0D3FAD8_A0A0D3FAD8_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0HLC2_A0A0E0HLC2_ORYNI_4536 and tr_Q6Z2V3_Q6Z2V3_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A0A0E0HN24_A0A0E0HN24_ORYNI_4536 and tr_I1Q0Y4_I1Q0Y4_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0HN24_A0A0E0HN24_ORYNI_4536 and tr_A0A0D3GEJ8_A0A0D3GEJ8_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0IN43_A0A0E0IN43_ORYNI_4536 and tr_A2Z3N4_A2Z3N4_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0IN43_A0A0E0IN43_ORYNI_4536 and tr_I1QQW9_I1QQW9_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0IN43_A0A0E0IN43_ORYNI_4536 and tr_A0A0E0EUH7_A0A0E0EUH7_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_A0A0E0IN43_A0A0E0IN43_ORYNI_4536 and tr_A0A0D3H9K3_A0A0D3H9K3_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0IN43_A0A0E0IN43_ORYNI_4536 and tr_A0A0E0B5Z4_A0A0E0B5Z4_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0IN43_A0A0E0IN43_ORYNI_4536 and tr_Q7XXN2_Q7XXN2_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A0A0E0IYB3_A0A0E0IYB3_ORYNI_4536 and tr_I1NYK7_I1NYK7_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0IYB3_A0A0E0IYB3_ORYNI_4536 and tr_A0A0E0NBU1_A0A0E0NBU1_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0IYB3_A0A0E0IYB3_ORYNI_4536 and tr_A0A0D3F2K1_A0A0D3F2K1_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_F6VUC2_F6VUC2_MACMU_9544 and tr_A0A2I3LNV8_A0A2I3LNV8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6VUC2_F6VUC2_MACMU_9544 and tr_A0A2K6CZF3_A0A2K6CZF3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HKE5_F7HKE5_MACMU_9544 and tr_G7PHV3_G7PHV3_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7HKE5_F7HKE5_MACMU_9544 and tr_A0A0D9QZK4_A0A0D9QZK4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7HKE5_F7HKE5_MACMU_9544 and tr_A0A2K5MWS6_A0A2K5MWS6_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7HKE5_F7HKE5_MACMU_9544 and tr_A0A2K6D1I5_A0A2K6D1I5_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HKE5_F7HKE5_MACMU_9544 and tr_A0A2K5XZK8_A0A2K5XZK8_MANLE_9568 are exactly identical! WARNING: Sequences tr_A2YAZ9_A2YAZ9_ORYSI_39946 and tr_Q0DDD4_Q0DDD4_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_H0Z9B6_H0Z9B6_TAEGU_59729 and tr_A0A218UIL3_A0A218UIL3_9PASE_299123 are exactly identical! WARNING: Sequences tr_G7NYY6_G7NYY6_MACFA_9541 and tr_A0A2K5Y7V5_A0A2K5Y7V5_MANLE_9568 are exactly identical! WARNING: Sequences tr_M4E5G6_M4E5G6_BRARP_51351 and tr_A0A078FKC3_A0A078FKC3_BRANA_3708 are exactly identical! WARNING: Sequences tr_W2R4S5_W2R4S5_PHYPN_761204 and tr_A0A0W8D2L1_A0A0W8D2L1_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2R4S5_W2R4S5_PHYPN_761204 and tr_W2KJ21_W2KJ21_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A3B6LRR0_A0A3B6LRR0_WHEAT_4565 and tr_A0A3B6MVS1_A0A3B6MVS1_WHEAT_4565 are exactly identical! WARNING: Sequences tr_A0A067FLE1_A0A067FLE1_CITSI_2711 and tr_V4U926_V4U926_9ROSI_85681 are exactly identical! WARNING: Sequences tr_A0A096N4Z8_A0A096N4Z8_PAPAN_9555 and tr_A0A2K5NJE6_A0A2K5NJE6_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096N4Z8_A0A096N4Z8_PAPAN_9555 and tr_A0A2K5ZSV7_A0A2K5ZSV7_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0D2QJL6_A0A0D2QJL6_GOSRA_29730 and tr_A0A1U8P0S7_A0A1U8P0S7_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A2I0MJ01_A0A2I0MJ01_COLLI_8932 and tr_A0A1V4K6K4_A0A1V4K6K4_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1S3XTN8_A0A1S3XTN8_TOBAC_4097 and tr_A0A1U7YJI0_A0A1U7YJI0_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4A5M9_A0A1S4A5M9_TOBAC_4097 and tr_A0A1U7VM95_A0A1U7VM95_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4AA74_A0A1S4AA74_TOBAC_4097 and tr_A0A1U7YTV3_A0A1U7YTV3_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4AL66_A0A1S4AL66_TOBAC_4097 and tr_A0A1S4D257_A0A1S4D257_TOBAC_4097 are exactly identical! WARNING: Sequences tr_A0A1S4AL66_A0A1S4AL66_TOBAC_4097 and tr_A0A1U7Y7C5_A0A1U7Y7C5_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4AYP5_A0A1S4AYP5_TOBAC_4097 and tr_A0A1S4CMG2_A0A1S4CMG2_TOBAC_4097 are exactly identical! WARNING: Sequences tr_A0A1S4AYP5_A0A1S4AYP5_TOBAC_4097 and tr_A0A1J6IH57_A0A1J6IH57_NICAT_49451 are exactly identical! WARNING: Sequences tr_A0A1S4AYP5_A0A1S4AYP5_TOBAC_4097 and tr_A0A1U7WNZ7_A0A1U7WNZ7_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A226NH32_A0A226NH32_CALSU_9009 and tr_A0A226P568_A0A226P568_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0QP22_A0A2D0QP22_ICTPU_7998 and tr_A0A2D0QRF0_A0A2D0QRF0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2G2YWA0_A0A2G2YWA0_CAPAN_4072 and tr_A0A2G3BRD9_A0A2G3BRD9_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2G2Z1K5_A0A2G2Z1K5_CAPAN_4072 and tr_A0A2G3BZP5_A0A2G3BZP5_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2G3A9X9_A0A2G3A9X9_CAPAN_4072 and tr_A0A2G3D7F5_A0A2G3D7F5_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2J6JMT0_A0A2J6JMT0_LACSA_4236 and tr_A0A2J6JQU8_A0A2J6JQU8_LACSA_4236 are exactly identical! WARNING: Sequences tr_A0A2J6JMT0_A0A2J6JMT0_LACSA_4236 and tr_A0A2J6MI55_A0A2J6MI55_LACSA_4236 are exactly identical! WARNING: Sequences tr_A0A2U1MV54_A0A2U1MV54_ARTAN_35608 and tr_A0A2U1NSC7_A0A2U1NSC7_ARTAN_35608 are exactly identical! WARNING: Sequences tr_A0A2U4A929_A0A2U4A929_TURTR_9739 and tr_A0A2Y9N3G2_A0A2Y9N3G2_DELLE_9749 are exactly identical! WARNING: Duplicate sequences found: 61 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/4_raxmlng_ancestral/Q9NYL2.raxml.reduced.phy Alignment comprises 1 partitions and 800 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 800 Gaps: 40.15 % Invariant sites: 0.75 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/4_raxmlng_ancestral/Q9NYL2.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/3_mltree/Q9NYL2.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 200 / 16000 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -248022.600557 [00:00:00 -248022.600557] Initial branch length optimization [00:00:03 -201287.034501] Model parameter optimization (eps = 0.100000) [00:01:02] Tree #1, final logLikelihood: -200842.405172 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.134345,0.154142) (0.094516,0.189863) (0.348692,0.680049) (0.422448,1.714341) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/4_raxmlng_ancestral/Q9NYL2.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/4_raxmlng_ancestral/Q9NYL2.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/4_raxmlng_ancestral/Q9NYL2.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NYL2/4_raxmlng_ancestral/Q9NYL2.raxml.log Analysis started: 02-Jun-2021 17:56:22 / finished: 02-Jun-2021 17:57:32 Elapsed time: 69.621 seconds Consumed energy: 6.050 Wh