RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 02-Jun-2021 18:13:02 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/2_msa/Q9NW08_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/3_mltree/Q9NW08.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/4_raxmlng_ancestral/Q9NW08 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622646782 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/2_msa/Q9NW08_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 1133 sites WARNING: Sequences tr_B4QC69_B4QC69_DROSI_7240 and tr_B4HNX0_B4HNX0_DROSE_7238 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_M3Y010_M3Y010_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2I2ZIU3_A0A2I2ZIU3_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2J8S2N1_A0A2J8S2N1_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_E2RNN5_E2RNN5_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_H2QPI8_H2QPI8_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_W5P6A2_W5P6A2_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_G3V8Y5_G3V8Y5_RAT_10116 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_I3M351_I3M351_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_H0XEF9_H0XEF9_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A286XIQ9_A0A286XIQ9_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and sp_P30876_RPB2_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A1D5QGA5_A0A1D5QGA5_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_F6PQF5_F6PQF5_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_I3LGP4_I3LGP4_PIG_9823 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_G7P5R6_G7P5R6_MACFA_9541 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A5PJW8_A5PJW8_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A337SUE0_A0A337SUE0_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A096NEY4_A0A096NEY4_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A1S2ZSL2_A0A1S2ZSL2_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A1U7V0T5_A0A1U7V0T5_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A1U7R4C7_A0A1U7R4C7_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2K5MR27_A0A2K5MR27_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2K6DNS3_A0A2K6DNS3_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2R9BZK6_A0A2R9BZK6_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2U4AS95_A0A2U4AS95_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2U3VJF7_A0A2U3VJF7_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2U3XHG9_A0A2U3XHG9_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2Y9JMS8_A0A2Y9JMS8_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2Y9MIS0_A0A2Y9MIS0_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A2Y9THK3_A0A2Y9THK3_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q8CFI7_RPB2_MOUSE_10090 and tr_A0A383YR43_A0A383YR43_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_H2NIH8_H2NIH8_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_A0A2I3RLS4_A0A2I3RLS4_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and sp_Q9NW08_RPC2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_F6WH42_F6WH42_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_G1MC66_G1MC66_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_G7PI40_G7PI40_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_A0A2K5MES8_A0A2K5MES8_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_A0A2K6E5P2_A0A2K6E5P2_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_A0A2K5Y2X8_A0A2K5Y2X8_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_A0A2R9B527_A0A2R9B527_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I2Z996_A0A2I2Z996_GORGO_9595 and tr_A0A384DAT8_A0A384DAT8_URSMA_29073 are exactly identical! WARNING: Sequences tr_B8MYG2_B8MYG2_ASPFN_332952 and tr_Q2URF4_Q2URF4_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8MYG2_B8MYG2_ASPFN_332952 and tr_A0A1S9DV38_A0A1S9DV38_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_A0A179UUT9_A0A179UUT9_BLAGS_559298 and tr_C5GKN6_C5GKN6_AJEDR_559297 are exactly identical! WARNING: Sequences tr_E9CT81_E9CT81_COCPS_443226 and tr_A0A0J6Y8L5_A0A0J6Y8L5_COCIT_404692 are exactly identical! WARNING: Sequences tr_J4KN85_J4KN85_BEAB2_655819 and tr_A0A0A2VHG1_A0A0A2VHG1_BEABA_1245745 are exactly identical! WARNING: Sequences tr_J4KN85_J4KN85_BEAB2_655819 and tr_A0A2N6NIA7_A0A2N6NIA7_BEABA_176275 are exactly identical! WARNING: Sequences tr_M4ALN2_M4ALN2_XIPMA_8083 and tr_A0A087YGK5_A0A087YGK5_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A0E0GNX8_A0A0E0GNX8_ORYNI_4536 and tr_A0A0E0NWA8_A0A0E0NWA8_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A2Q8V9_A2Q8V9_ASPNC_425011 and tr_G3XSL0_G3XSL0_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2Q8V9_A2Q8V9_ASPNC_425011 and tr_A0A319AKV5_A0A319AKV5_9EURO_1450533 are exactly identical! WARNING: Sequences tr_G7X993_G7X993_ASPKW_1033177 and tr_A0A146FMY8_A0A146FMY8_9EURO_1069201 are exactly identical! WARNING: Sequences tr_G7X993_G7X993_ASPKW_1033177 and tr_A0A317WHQ7_A0A317WHQ7_9EURO_1448314 are exactly identical! WARNING: Sequences tr_I1PC40_I1PC40_ORYGL_4538 and tr_Q10JZ3_Q10JZ3_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_G2YDK5_G2YDK5_BOTF4_999810 and tr_M7V1H1_M7V1H1_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_F2SPY7_F2SPY7_TRIRC_559305 and tr_A0A178F339_A0A178F339_TRIRU_5551 are exactly identical! WARNING: Sequences tr_W7LBD2_W7LBD2_GIBM7_334819 and tr_S0DLW7_S0DLW7_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_W7LBD2_W7LBD2_GIBM7_334819 and tr_N4TUJ3_N4TUJ3_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_W7LBD2_W7LBD2_GIBM7_334819 and tr_X0CWZ9_X0CWZ9_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_W7LBD2_W7LBD2_GIBM7_334819 and tr_A0A2H3TC63_A0A2H3TC63_FUSOX_5507 are exactly identical! WARNING: Sequences tr_W7LBD2_W7LBD2_GIBM7_334819 and tr_A0A2H3I6K5_A0A2H3I6K5_FUSOX_327505 are exactly identical! WARNING: Sequences tr_W7LBD2_W7LBD2_GIBM7_334819 and tr_A0A365MU51_A0A365MU51_GIBIN_948311 are exactly identical! WARNING: Sequences tr_A0A078HFW0_A0A078HFW0_BRANA_3708 and tr_A0A0D3AU78_A0A0D3AU78_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A0V0W8P5_A0A0V0W8P5_9BILA_92179 and tr_A0A0V1L2C2_A0A0V1L2C2_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A124GRY7_A0A124GRY7_9EURO_48697 and tr_A0A1V6NTI2_A0A1V6NTI2_9EURO_60169 are exactly identical! WARNING: Sequences tr_A0A1S3RRR7_A0A1S3RRR7_SALSA_8030 and tr_A0A060W9N1_A0A060W9N1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3RRR7_A0A1S3RRR7_SALSA_8030 and tr_A0A060WCR7_A0A060WCR7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3VFK5_A0A1S3VFK5_VIGRR_3916 and tr_A0A3Q0F4M1_A0A3Q0F4M1_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A2I1H4A0_A0A2I1H4A0_9GLOM_588596 and tr_A0A2H5R5Y0_A0A2H5R5Y0_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A2S7NM73_A0A2S7NM73_9HELO_2070414 and tr_A0A2S7QT83_A0A2S7QT83_9HELO_2070412 are exactly identical! WARNING: Sequences tr_A0A319C1A3_A0A319C1A3_9EURO_1448315 and tr_A0A2V5I1P2_A0A2V5I1P2_9EURO_1450541 are exactly identical! WARNING: Sequences tr_A0A319C1A3_A0A319C1A3_9EURO_1448315 and tr_A0A2V5H6V1_A0A2V5H6V1_9EURO_1450538 are exactly identical! WARNING: Sequences tr_A0A2Y9EGA5_A0A2Y9EGA5_PHYCD_9755 and tr_A0A383YSG0_A0A383YSG0_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 75 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/4_raxmlng_ancestral/Q9NW08.raxml.reduced.phy Alignment comprises 1 partitions and 1133 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 1133 Gaps: 4.23 % Invariant sites: 2.65 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/4_raxmlng_ancestral/Q9NW08.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/3_mltree/Q9NW08.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 284 / 22720 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -354777.815759 [00:00:00 -354777.815759] Initial branch length optimization [00:00:02 -353354.401522] Model parameter optimization (eps = 0.100000) [00:00:52] Tree #1, final logLikelihood: -352528.958203 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.269324,0.318590) (0.329651,0.523062) (0.247322,1.226560) (0.153703,2.852334) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/4_raxmlng_ancestral/Q9NW08.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/4_raxmlng_ancestral/Q9NW08.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/4_raxmlng_ancestral/Q9NW08.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9NW08/4_raxmlng_ancestral/Q9NW08.raxml.log Analysis started: 02-Jun-2021 18:13:02 / finished: 02-Jun-2021 18:14:08 Elapsed time: 66.571 seconds Consumed energy: 5.084 Wh