RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 06-Jul-2021 10:38:23 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/2_msa/Q9NR82_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82 --seed 2 --threads 2 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (2 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/2_msa/Q9NR82_trimmed_msa.fasta [00:00:00] Loaded alignment with 946 taxa and 124 sites WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_A1Z856_A1Z856_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_B4J6V5_B4J6V5_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_B4HME1_B4HME1_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_A0A0R3NMM8_A0A0R3NMM8_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_B4MIM2_B4MIM2_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_B3MBF2_B3MBF2_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_B4GBS6_B4GBS6_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_B4LKB4_B4LKB4_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_A0A0M4EHW6_A0A0M4EHW6_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4QI99_B4QI99_DROSI_7240 and tr_A0A1W4VQN6_A0A1W4VQN6_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9GMM1_E9GMM1_DAPPU_6669 and tr_A0A0P5LGJ7_A0A0P5LGJ7_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E2AYF2_E2AYF2_CAMFO_104421 and tr_E2BJK9_E2BJK9_HARSA_610380 are exactly identical! WARNING: Sequences tr_E2AYF2_E2AYF2_CAMFO_104421 and tr_A0A0L7RK60_A0A0L7RK60_9HYME_597456 are exactly identical! WARNING: Sequences tr_A0A140LFR8_A0A140LFR8_DANRE_7955 and tr_A0A3B1J214_A0A3B1J214_ASTMX_7994 are exactly identical! WARNING: Sequences tr_A0A140LFR8_A0A140LFR8_DANRE_7955 and tr_A0A1S3KNI2_A0A1S3KNI2_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A2R8QD79_A0A2R8QD79_DANRE_7955 and tr_F1RB62_F1RB62_DANRE_7955 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_F1RE25_F1RE25_DANRE_7955 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_H2LQ97_H2LQ97_ORYLA_8090 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_A0A3B5Q5D3_A0A3B5Q5D3_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_I3K398_I3K398_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_W5N4S1_W5N4S1_LEPOC_7918 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_A0A087X6K0_A0A087X6K0_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_A0A0P7VT09_A0A0P7VT09_9TELE_113540 are exactly identical! WARNING: Sequences tr_A0A2R8QGH1_A0A2R8QGH1_DANRE_7955 and tr_A0A1S3LVG4_A0A1S3LVG4_SALSA_8030 are exactly identical! WARNING: Sequences tr_E7FEC8_E7FEC8_DANRE_7955 and tr_A0A3B1J8U1_A0A3B1J8U1_ASTMX_7994 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_G1NM43_G1NM43_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_K7F2F9_K7F2F9_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_G3WPG8_G3WPG8_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_U3IS72_U3IS72_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A151MUD0_A0A151MUD0_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A0Q3VYD6_A0A0Q3VYD6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091J5B8_A0A091J5B8_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A093PNE5_A0A093PNE5_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091W3N5_A0A091W3N5_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A087QVC1_A0A087QVC1_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A093KEJ2_A0A093KEJ2_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091VCP0_A0A091VCP0_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A099Z3Y3_A0A099Z3Y3_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091GCD4_A0A091GCD4_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A0A0A3C9_A0A0A0A3C9_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A2I0MTR3_A0A2I0MTR3_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A093GDH2_A0A093GDH2_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A091HS19_A0A091HS19_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A1S3A5P1_A0A1S3A5P1_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A3Q0FH56_A0A3Q0FH56_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A1V4JMG3_A0A1V4JMG3_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5P8K4_A0A1D5P8K4_CHICK_9031 and tr_A0A226N544_A0A226N544_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_G1N719_G1N719_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_K7FP05_K7FP05_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_G3VFJ2_G3VFJ2_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_H0ZFU9_H0ZFU9_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_H3AJK0_H3AJK0_LATCH_7897 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_U3KA98_U3KA98_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_U3J4D5_U3J4D5_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091EE07_A0A091EE07_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091IWL2_A0A091IWL2_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A093PYV1_A0A093PYV1_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091UJX3_A0A091UJX3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A087RK45_A0A087RK45_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A093HNK9_A0A093HNK9_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091W852_A0A091W852_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A099ZSZ2_A0A099ZSZ2_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091FQJ8_A0A091FQJ8_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A0A0AZB1_A0A0A0AZB1_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A2I0MHX8_A0A2I0MHX8_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A093GJQ3_A0A093GJQ3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A091HKB8_A0A091HKB8_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A1V4JNM5_A0A1V4JNM5_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A226N7H6_A0A226N7H6_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5PGY0_A0A1D5PGY0_CHICK_9031 and tr_A0A226P256_A0A226P256_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_Q8K3F6_KCNQ3_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_M3XQS8_M3XQS8_MUSPF_9669 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I3HPQ0_A0A2I3HPQ0_NOMLE_61853 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1PS86_G1PS86_MYOLU_59463 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1QAM2_G1QAM2_MYOLU_59463 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I2Y6I5_A0A2I2Y6I5_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H2PR82_H2PR82_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1NJK4_G1NJK4_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1U889_G1U889_RABIT_9986 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F1PVZ4_F1PVZ4_CANLF_9615 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H2QWQ8_H2QWQ8_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F7G7S4_F7G7S4_MONDO_13616 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F6QEV2_F6QEV2_HORSE_9796 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_O88944_KCNQ3_RAT_10116 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_I3MGR4_I3MGR4_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H0X7V7_H0X7V7_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_O43525_KCNQ3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F7DI95_F7DI95_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G5C6Q1_G5C6Q1_HETGA_10181 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_K7FEF1_K7FEF1_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G3SWQ3_G3SWQ3_LOXAF_9785 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G3VZW6_G3VZW6_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_H0ZQN1_H0ZQN1_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F7HWT6_F7HWT6_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_F1RRT9_F1RRT9_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G1M2U4_G1M2U4_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_G7PCU7_G7PCU7_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and sp_P58126_KCNQ3_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_L5KJ13_L5KJ13_PTEAL_9402 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I2UJ25_A0A2I2UJ25_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_U3JIW4_U3JIW4_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_U3I8X0_U3I8X0_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I3MAZ8_A0A2I3MAZ8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091DFP0_A0A091DFP0_FUKDA_885580 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A0D9RC24_A0A0D9RC24_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091F6N3_A0A091F6N3_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091JFB6_A0A091JFB6_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A093S200_A0A093S200_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091VGC2_A0A091VGC2_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A087QRU7_A0A087QRU7_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A093J701_A0A093J701_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091WKW8_A0A091WKW8_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A099Z4M4_A0A099Z4M4_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091G0N2_A0A091G0N2_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A0A0A824_A0A0A0A824_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2I0MXE7_A0A2I0MXE7_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A093G4N3_A0A093G4N3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A091HPU0_A0A091HPU0_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1S3FW23_A0A1S3FW23_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1L8FTX8_A0A1L8FTX8_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1L8G026_A0A1L8G026_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A3Q0DLV0_A0A3Q0DLV0_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1U7S030_A0A1U7S030_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1U8C684_A0A1U8C684_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A1V4KVP2_A0A1V4KVP2_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A218V7H5_A0A218V7H5_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2K5NHH6_A0A2K5NHH6_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2K6E1G7_A0A2K6E1G7_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2K5XGJ4_A0A2K5XGJ4_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2R9BLA0_A0A2R9BLA0_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2U4B336_A0A2U4B336_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2U3WWZ0_A0A2U3WWZ0_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2U3Z492_A0A2U3Z492_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2Y9DFB2_A0A2Y9DFB2_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2Y9JAG9_A0A2Y9JAG9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2Y9LRP7_A0A2Y9LRP7_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A2Y9EPE3_A0A2Y9EPE3_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A1D5PTN9_A0A1D5PTN9_CHICK_9031 and tr_A0A384AP87_A0A384AP87_BALAS_310752 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_G1N3R9_G1N3R9_MELGA_9103 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_G1KEV7_G1KEV7_ANOCA_28377 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_K7FZ48_K7FZ48_PELSI_13735 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_H0ZAR3_H0ZAR3_TAEGU_59729 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_U3K756_U3K756_FICAL_59894 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_U3IL20_U3IL20_ANAPL_8839 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A151NYJ8_A0A151NYJ8_ALLMI_8496 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091E7U8_A0A091E7U8_CORBR_85066 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091JHE4_A0A091JHE4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A093PTR8_A0A093PTR8_9PASS_328815 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091VUC1_A0A091VUC1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A087QRQ2_A0A087QRQ2_APTFO_9233 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A093J1S3_A0A093J1S3_STRCA_441894 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A099ZHN2_A0A099ZHN2_TINGU_94827 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091G6F6_A0A091G6F6_9AVES_55661 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A091I973_A0A091I973_CALAN_9244 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A1U7RWZ2_A0A1U7RWZ2_ALLSI_38654 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A1V4KKE6_A0A1V4KKE6_PATFA_372326 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A218US12_A0A218US12_9PASE_299123 are exactly identical! WARNING: Sequences tr_E1C3B4_E1C3B4_CHICK_9031 and tr_A0A226NJJ5_A0A226NJJ5_CALSU_9009 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_M3Y169_M3Y169_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2I3HEJ1_A0A2I3HEJ1_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_G3RC31_G3RC31_GORGO_9595 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_Q9MYS6_KCNQ1_RABIT_9986 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_J9PA96_J9PA96_CANLF_9615 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2I3TFU0_A0A2I3TFU0_PANTR_9598 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_Q9Z0N7_KCNQ1_RAT_10116 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_I3N6H8_I3N6H8_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_O70344_KCNQ1_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_P51787_KCNQ1_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_F7C2U7_F7C2U7_MACMU_9544 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_G5BSU0_G5BSU0_HETGA_10181 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_F6PT45_F6PT45_CALJA_9483 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A287AVP7_A0A287AVP7_PIG_9823 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_G1L5M3_G1L5M3_AILME_9646 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_G7PNX3_G7PNX3_MACFA_9541 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_F1N4R0_F1N4R0_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A337SCU5_A0A337SCU5_FELCA_9685 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and sp_O97531_KCNQ1_FELCA_9685 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A096NDD2_A0A096NDD2_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A0D9RB34_A0A0D9RB34_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A1S3FJV6_A0A1S3FJV6_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A1U7TTJ5_A0A1U7TTJ5_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A1U7Q2W7_A0A1U7Q2W7_MESAU_10036 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2K5MPS2_A0A2K5MPS2_CERAT_9531 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2K6DYU8_A0A2K6DYU8_MACNE_9545 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2K6AIU9_A0A2K6AIU9_MANLE_9568 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2R9B4Z8_A0A2R9B4Z8_PANPA_9597 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2U3W6S4_A0A2U3W6S4_ODORO_9708 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2U3XY29_A0A2U3XY29_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2Y9JQ22_A0A2Y9JQ22_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A2Y9PLZ2_A0A2Y9PLZ2_DELLE_9749 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A384CTW3_A0A384CTW3_URSMA_29073 are exactly identical! WARNING: Sequences sp_P97414_KCNQ1_MOUSE_10090 and tr_A0A383Z8G3_A0A383Z8G3_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_M3XZ34_M3XZ34_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G1QKC9_G1QKC9_NOMLE_61853 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G1PTW5_G1PTW5_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G3R701_G3R701_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_H2PJK1_H2PJK1_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F1PM64_F1PM64_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2I3S1D1_A0A2I3S1D1_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F6T6K9_F6T6K9_HORSE_9796 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_W5PN41_W5PN41_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F1LY25_F1LY25_RAT_10116 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A287D6X1_A0A287D6X1_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_B4UT00_B4UT00_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_H0UT79_H0UT79_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and sp_Q9NR82_KCNQ5_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F6Q5P1_F6Q5P1_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G5ALU0_G5ALU0_HETGA_10181 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_H0ZR24_H0ZR24_TAEGU_59729 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F7GQY9_F7GQY9_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A287BH80_A0A287BH80_PIG_9823 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G1LMS1_G1LMS1_AILME_9646 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_G7P303_G7P303_MACFA_9541 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_F1MPK2_F1MPK2_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_L5JMJ7_L5JMJ7_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_M3XDV8_M3XDV8_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2I3N4U3_A0A2I3N4U3_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A091E0L6_A0A091E0L6_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A0D9RN61_A0A0D9RN61_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A091EWB3_A0A091EWB3_CORBR_85066 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A1S3GJN0_A0A1S3GJN0_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A3Q0DN51_A0A3Q0DN51_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A1U7QEM8_A0A1U7QEM8_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A218UVQ9_A0A218UVQ9_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2K5L5Z3_A0A2K5L5Z3_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2K6DCZ5_A0A2K6DCZ5_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2K5Z353_A0A2K5Z353_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2R9C3J4_A0A2R9C3J4_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2U4AV51_A0A2U4AV51_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2U3WUM5_A0A2U3WUM5_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9DVW9_A0A2Y9DVW9_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9JZG6_A0A2Y9JZG6_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9PRV4_A0A2Y9PRV4_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A2Y9TD28_A0A2Y9TD28_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A384BLX5_A0A384BLX5_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q9JK45_KCNQ5_MOUSE_10090 and tr_A0A383YVK8_A0A383YVK8_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_M3YRN7_M3YRN7_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_G1P8V8_G1P8V8_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_G3RZZ7_G3RZZ7_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_H2N7T6_H2N7T6_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_G1TAC8_G1TAC8_RABIT_9986 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_F1Q3A1_F1Q3A1_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_F7B5A9_F7B5A9_MONDO_13616 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_I3LZF1_I3LZF1_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_H0X7C2_H0X7C2_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_H0V4D7_H0V4D7_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and sp_P56696_KCNQ4_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_F7CRG2_F7CRG2_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_G3U0A5_G3U0A5_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_G3W6Y4_G3W6Y4_SARHA_9305 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_F7I302_F7I302_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_F1N6U1_F1N6U1_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_L5L799_L5L799_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_M3VZD7_M3VZD7_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A0D9S7M2_A0A0D9S7M2_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A1S3AJF0_A0A1S3AJF0_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A1S3F8Q3_A0A1S3F8Q3_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A3Q0EAI6_A0A3Q0EAI6_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A1U7R1Q5_A0A1U7R1Q5_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A2K6AY37_A0A2K6AY37_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A2K5YK13_A0A2K5YK13_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A2R9C497_A0A2R9C497_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A2U3WDU3_A0A2U3WDU3_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A2U3YU70_A0A2U3YU70_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A2Y9DC88_A0A2Y9DC88_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A2Y9J3J2_A0A2Y9J3J2_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q9JK97_KCNQ4_MOUSE_10090 and tr_A0A383YPT0_A0A383YPT0_BALAS_310752 are exactly identical! WARNING: Sequences tr_W5JI22_W5JI22_ANODA_43151 and tr_A7UU78_A7UU78_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JI22_W5JI22_ANODA_43151 and tr_A0A084WEL6_A0A084WEL6_ANOSI_74873 are exactly identical! WARNING: Sequences tr_W5JQM2_W5JQM2_ANODA_43151 and tr_B0WY79_B0WY79_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JQM2_W5JQM2_ANODA_43151 and tr_Q7QHB3_Q7QHB3_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JQM2_W5JQM2_ANODA_43151 and tr_Q16NV9_Q16NV9_AEDAE_7159 are exactly identical! WARNING: Sequences tr_W5JQM2_W5JQM2_ANODA_43151 and tr_Q16VR9_Q16VR9_AEDAE_7159 are exactly identical! WARNING: Sequences tr_W5JQM2_W5JQM2_ANODA_43151 and tr_A0A084WM98_A0A084WM98_ANOSI_74873 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G3HGY7_G3HGY7_CRIGR_10029 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G3QZ98_G3QZ98_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F1PER0_F1PER0_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_H2QKS4_H2QKS4_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F6WQP9_F6WQP9_MONDO_13616 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F6TR64_F6TR64_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_W5PN83_W5PN83_SHEEP_9940 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and sp_O88943_KCNQ2_RAT_10116 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A287DBX6_A0A287DBX6_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_H0X1I7_H0X1I7_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A286XK97_A0A286XK97_CAVPO_10141 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and sp_O43526_KCNQ2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F7ASD7_F7ASD7_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G5C8D4_G5C8D4_HETGA_10181 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G3TZD6_G3TZD6_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F7CY49_F7CY49_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A287ALK7_A0A287ALK7_PIG_9823 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G1L416_G1L416_AILME_9646 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_G7PFI1_G7PFI1_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_F1MCH6_F1MCH6_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_L5JYN1_L5JYN1_PTEAL_9402 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A337SQB4_A0A337SQB4_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2I3MKQ2_A0A2I3MKQ2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A091EP95_A0A091EP95_FUKDA_885580 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A0D9RUZ8_A0A0D9RUZ8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A1S3WDJ1_A0A1S3WDJ1_ERIEU_9365 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A1S3GAG0_A0A1S3GAG0_DIPOR_10020 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A3Q0DLB6_A0A3Q0DLB6_TARSY_1868482 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A1U8C944_A0A1U8C944_MESAU_10036 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2K5L1K5_A0A2K5L1K5_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2K6C5U6_A0A2K6C5U6_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2K5ZMY4_A0A2K5ZMY4_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2R9AU86_A0A2R9AU86_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2U3WMF7_A0A2U3WMF7_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2U3Z688_A0A2U3Z688_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2Y9D9L0_A0A2Y9D9L0_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2Y9IT30_A0A2Y9IT30_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2Y9Q6Q1_A0A2Y9Q6Q1_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A2Y9T7Y1_A0A2Y9T7Y1_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3Y9Y5_M3Y9Y5_MUSPF_9669 and tr_A0A384ADR9_A0A384ADR9_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A3B3HAD3_A0A3B3HAD3_ORYLA_8090 and tr_I3KTS3_I3KTS3_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B3HAD3_A0A3B3HAD3_ORYLA_8090 and tr_H2RMU1_H2RMU1_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A3B3HAD3_A0A3B3HAD3_ORYLA_8090 and tr_H3CBD5_H3CBD5_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A3B3HAD3_A0A3B3HAD3_ORYLA_8090 and tr_A0A1S3L9M1_A0A1S3L9M1_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A3B3HAD3_A0A3B3HAD3_ORYLA_8090 and tr_A0A1S3P7K9_A0A1S3P7K9_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A3B3HAD3_A0A3B3HAD3_ORYLA_8090 and tr_A0A060WDT5_A0A060WDT5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_A0A3B5QI81_A0A3B5QI81_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_I3JQF8_I3JQF8_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_A0A3B5K8K2_A0A3B5K8K2_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_H3CCM6_H3CCM6_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_A0A096LYX0_A0A096LYX0_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_A0A2I4CKF1_A0A2I4CKF1_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B3HS90_A0A3B3HS90_ORYLA_8090 and tr_A0A2U9BXB5_A0A2U9BXB5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2L5I0_H2L5I0_ORYLA_8090 and tr_A0A087XU80_A0A087XU80_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2M995_H2M995_ORYLA_8090 and tr_A0A3B5QY99_A0A3B5QY99_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2M995_H2M995_ORYLA_8090 and tr_A0A087XX80_A0A087XX80_POEFO_48698 are exactly identical! WARNING: Sequences tr_G1PJ45_G1PJ45_MYOLU_59463 and tr_F1PG84_F1PG84_CANLF_9615 are exactly identical! WARNING: Sequences tr_G1PJ45_G1PJ45_MYOLU_59463 and tr_W5P411_W5P411_SHEEP_9940 are exactly identical! WARNING: Sequences tr_G1PJ45_G1PJ45_MYOLU_59463 and tr_I3LUF2_I3LUF2_PIG_9823 are exactly identical! WARNING: Sequences tr_G1PJ45_G1PJ45_MYOLU_59463 and tr_E1BKI8_E1BKI8_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G1PJ45_G1PJ45_MYOLU_59463 and tr_L5JYS0_L5JYS0_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G1PJ45_G1PJ45_MYOLU_59463 and tr_M3WFK7_M3WFK7_FELCA_9685 are exactly identical! WARNING: Sequences tr_G3HLS7_G3HLS7_CRIGR_10029 and tr_A0A1U7QSD1_A0A1U7QSD1_MESAU_10036 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_K7FYF9_K7FYF9_PELSI_13735 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_H0ZR32_H0ZR32_TAEGU_59729 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_F6T4K1_F6T4K1_XENTR_8364 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_H3AHJ4_H3AHJ4_LATCH_7897 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_A0A151P7L3_A0A151P7L3_ALLMI_8496 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_A0A0Q3MRA9_A0A0Q3MRA9_AMAAE_12930 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_A0A093Q3Z2_A0A093Q3Z2_9PASS_328815 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_A0A093JXX8_A0A093JXX8_STRCA_441894 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_A0A1L8GQW8_A0A1L8GQW8_XENLA_8355 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_A0A1L8GW83_A0A1L8GW83_XENLA_8355 are exactly identical! WARNING: Sequences tr_H9G8U0_H9G8U0_ANOCA_28377 and tr_A0A3Q0H0M2_A0A3Q0H0M2_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A3B1E007_A0A3B1E007_CAEEL_6239 and tr_A0A1I7U3Z1_A0A1I7U3Z1_9PELO_1561998 are exactly identical! WARNING: Sequences tr_Q7JPF0_Q7JPF0_CAEEL_6239 and tr_A8XPS0_A8XPS0_CAEBR_6238 are exactly identical! WARNING: Sequences tr_Q7JPF0_Q7JPF0_CAEEL_6239 and tr_A0A1I7TW81_A0A1I7TW81_9PELO_1561998 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_K7GVR5_K7GVR5_CAEJA_281687 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_G0MSK2_G0MSK2_CAEBE_135651 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_E3LDF0_E3LDF0_CAERE_31234 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_A8XC51_A8XC51_CAEBR_6238 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_A0A1I7TIZ6_A0A1I7TIZ6_9PELO_1561998 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_A0A1I7TIZ7_A0A1I7TIZ7_9PELO_1561998 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_A0A261CPF2_A0A261CPF2_9PELO_1503980 are exactly identical! WARNING: Sequences tr_Q8MQC5_Q8MQC5_CAEEL_6239 and tr_A0A2G5SVC1_A0A2G5SVC1_9PELO_1611254 are exactly identical! WARNING: Sequences tr_F7D7K6_F7D7K6_ORNAN_9258 and tr_A0A0P7XJ86_A0A0P7XJ86_9TELE_113540 are exactly identical! WARNING: Sequences tr_F7GCT9_F7GCT9_MONDO_13616 and tr_U3JX41_U3JX41_FICAL_59894 are exactly identical! WARNING: Sequences tr_B0WCL2_B0WCL2_CULQU_7176 and tr_Q16H44_Q16H44_AEDAE_7159 are exactly identical! WARNING: Sequences tr_A0A3B5RB76_A0A3B5RB76_XIPMA_8083 and tr_A0A087XE65_A0A087XE65_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5RB76_A0A3B5RB76_XIPMA_8083 and tr_A0A2I4CYV8_A0A2I4CYV8_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B5RCU2_A0A3B5RCU2_XIPMA_8083 and tr_A0A2I4AJ16_A0A2I4AJ16_9TELE_52670 are exactly identical! WARNING: Sequences tr_M4ABE0_M4ABE0_XIPMA_8083 and tr_I3JET7_I3JET7_ORENI_8128 are exactly identical! WARNING: Sequences tr_M4ABE0_M4ABE0_XIPMA_8083 and tr_A0A087X366_A0A087X366_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4ABE0_M4ABE0_XIPMA_8083 and tr_A0A087YN00_A0A087YN00_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AC64_M4AC64_XIPMA_8083 and tr_I3JQZ6_I3JQZ6_ORENI_8128 are exactly identical! WARNING: Sequences tr_M4AC64_M4AC64_XIPMA_8083 and tr_H2T7X8_H2T7X8_TAKRU_31033 are exactly identical! WARNING: Sequences tr_M4AC64_M4AC64_XIPMA_8083 and tr_A0A087Y5R7_A0A087Y5R7_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AC64_M4AC64_XIPMA_8083 and tr_A0A1S3L7J5_A0A1S3L7J5_SALSA_8030 are exactly identical! WARNING: Sequences tr_M4AC64_M4AC64_XIPMA_8083 and tr_A0A1S3PPU1_A0A1S3PPU1_SALSA_8030 are exactly identical! WARNING: Sequences tr_H9J2J4_H9J2J4_BOMMO_7091 and tr_A0A0L7L344_A0A0L7L344_9NEOP_104452 are exactly identical! WARNING: Sequences tr_H9J2J4_H9J2J4_BOMMO_7091 and tr_A0A194RGK2_A0A194RGK2_PAPMA_76193 are exactly identical! WARNING: Sequences tr_H9J2J4_H9J2J4_BOMMO_7091 and tr_A0A194PQ19_A0A194PQ19_PAPXU_66420 are exactly identical! WARNING: Sequences tr_H9J2J4_H9J2J4_BOMMO_7091 and tr_A0A2A4JHX1_A0A2A4JHX1_HELVI_7102 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_F4WE37_F4WE37_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_A0A151X3V2_A0A151X3V2_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_A0A151IR59_A0A151IR59_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NUT7_A0A158NUT7_ATTCE_12957 and tr_A0A195BBF5_A0A195BBF5_9HYME_520822 are exactly identical! WARNING: Sequences tr_H0XQS6_H0XQS6_OTOGA_30611 and tr_M3X5X2_M3X5X2_FELCA_9685 are exactly identical! WARNING: Sequences tr_H2U4N7_H2U4N7_TAKRU_31033 and tr_G3PEE1_G3PEE1_GASAC_69293 are exactly identical! WARNING: Sequences tr_K7H1K3_K7H1K3_CAEJA_281687 and tr_A0A1I7TDM5_A0A1I7TDM5_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A0A0K0J5M2_A0A0K0J5M2_BRUMA_6279 and tr_A0A158PST5_A0A158PST5_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0K0J5M2_A0A0K0J5M2_BRUMA_6279 and tr_A0A0R3S6J6_A0A0R3S6J6_9BILA_1147741 are exactly identical! WARNING: Sequences tr_G1K376_G1K376_MACMU_9544 and tr_A0A0D9RP73_A0A0D9RP73_CHLSB_60711 are exactly identical! WARNING: Sequences tr_E5SL57_E5SL57_TRISP_6334 and tr_A0A0V0SIY5_A0A0V0SIY5_9BILA_6336 are exactly identical! WARNING: Sequences tr_G3NFU0_G3NFU0_GASAC_69293 and tr_A0A2U9BEQ4_A0A2U9BEQ4_SCOMX_52904 are exactly identical! WARNING: Sequences tr_G0ML84_G0ML84_CAEBE_135651 and tr_A0A2G5UTC1_A0A2G5UTC1_9PELO_1611254 are exactly identical! WARNING: Sequences tr_G0MQB7_G0MQB7_CAEBE_135651 and tr_G0PET1_G0PET1_CAEBE_135651 are exactly identical! WARNING: Sequences tr_G0MWJ7_G0MWJ7_CAEBE_135651 and tr_E3LCL0_E3LCL0_CAERE_31234 are exactly identical! WARNING: Sequences tr_G0MWJ7_G0MWJ7_CAEBE_135651 and tr_A0A261CQB3_A0A261CQB3_9PELO_1503980 are exactly identical! WARNING: Sequences tr_A0A1B8XXA7_A0A1B8XXA7_XENTR_8364 and tr_F6SB39_F6SB39_XENTR_8364 are exactly identical! WARNING: Sequences tr_F6VX60_F6VX60_XENTR_8364 and tr_A0A1L8GD44_A0A1L8GD44_XENLA_8355 are exactly identical! WARNING: Sequences tr_F6VX60_F6VX60_XENTR_8364 and tr_A0A1L8GJB4_A0A1L8GJB4_XENLA_8355 are exactly identical! WARNING: Sequences tr_F7A4K4_F7A4K4_XENTR_8364 and tr_A0A1L8G3E6_A0A1L8G3E6_XENLA_8355 are exactly identical! WARNING: Sequences tr_A8XYH2_A8XYH2_CAEBR_6238 and tr_A0A2G5V617_A0A2G5V617_9PELO_1611254 are exactly identical! WARNING: Sequences tr_U3JD26_U3JD26_FICAL_59894 and tr_A0A218UZ09_A0A218UZ09_9PASE_299123 are exactly identical! WARNING: Sequences tr_U3J0T1_U3J0T1_ANAPL_8839 and tr_A0A091V260_A0A091V260_NIPNI_128390 are exactly identical! WARNING: Sequences tr_U3J0T1_U3J0T1_ANAPL_8839 and tr_A0A091GK11_A0A091GK11_9AVES_55661 are exactly identical! WARNING: Sequences tr_U3J0T1_U3J0T1_ANAPL_8839 and tr_A0A2I0MKH4_A0A2I0MKH4_COLLI_8932 are exactly identical! WARNING: Sequences tr_U3J0T1_U3J0T1_ANAPL_8839 and tr_A0A091IMJ4_A0A091IMJ4_CALAN_9244 are exactly identical! WARNING: Sequences tr_U3J0T1_U3J0T1_ANAPL_8839 and tr_A0A1V4K884_A0A1V4K884_PATFA_372326 are exactly identical! WARNING: Sequences tr_W2QLG4_W2QLG4_PHYPN_761204 and tr_W2LQP9_W2LQP9_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A067RE81_A0A067RE81_ZOONE_136037 and tr_A0A2J7PF54_A0A2J7PF54_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A067RE81_A0A067RE81_ZOONE_136037 and tr_A0A2P8Z768_A0A2P8Z768_BLAGE_6973 are exactly identical! WARNING: Sequences tr_A0A0K0EUY4_A0A0K0EUY4_STRVS_75913 and tr_A0A0K0E027_A0A0K0E027_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0EUY4_A0A0K0EUY4_STRVS_75913 and tr_A0A090L7Q8_A0A090L7Q8_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0K0EUY4_A0A0K0EUY4_STRVS_75913 and tr_A0A0N4ZRR0_A0A0N4ZRR0_PARTI_131310 are exactly identical! WARNING: Sequences tr_A0A0K0EUY4_A0A0K0EUY4_STRVS_75913 and tr_A0A0N5BI09_A0A0N5BI09_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0FQB1_A0A0K0FQB1_STRVS_75913 and tr_A0A0K0E1Z7_A0A0K0E1Z7_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0FQB1_A0A0K0FQB1_STRVS_75913 and tr_A0A0N4Z380_A0A0N4Z380_PARTI_131310 are exactly identical! WARNING: Sequences tr_A0A0K0FQB1_A0A0K0FQB1_STRVS_75913 and tr_A0A0N5BH34_A0A0N5BH34_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0R3WKJ0_A0A0R3WKJ0_HYDTA_6205 and tr_A0A158RA57_A0A158RA57_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A151MCA0_A0A151MCA0_ALLMI_8496 and tr_A0A3Q0GIA4_A0A3Q0GIA4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151PGE8_A0A151PGE8_ALLMI_8496 and tr_A0A3Q0HDS4_A0A3Q0HDS4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0Q3M8F0_A0A0Q3M8F0_AMAAE_12930 and tr_A0A226MM62_A0A226MM62_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A0Q3M8F0_A0A0Q3M8F0_AMAAE_12930 and tr_A0A226P4J5_A0A226P4J5_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A0Q3X6L7_A0A0Q3X6L7_AMAAE_12930 and tr_A0A218UTC7_A0A218UTC7_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A091VLI6_A0A091VLI6_NIPNI_128390 and tr_A0A091G6X5_A0A091G6X5_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091WIM2_A0A091WIM2_OPIHO_30419 and tr_A0A099ZF49_A0A099ZF49_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0VPN8_A0A0V0VPN8_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V1LSP2_A0A0V1LSP2_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0ZPE0_A0A0V0ZPE0_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0Y8E1_A0A0V0Y8E1_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V1MDS0_A0A0V1MDS0_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V1PCP9_A0A0V1PCP9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0RXK0_A0A0V0RXK0_9BILA_6336 and tr_A0A0V0U2B6_A0A0V0U2B6_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V0WBD0_A0A0V0WBD0_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V0UYB5_A0A0V0UYB5_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V1L3I5_A0A0V1L3I5_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V0ZMT8_A0A0V0ZMT8_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V0YAH6_A0A0V0YAH6_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V1MCC6_A0A0V1MCC6_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V1NPM6_A0A0V1NPM6_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V1H0N9_A0A0V1H0N9_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V1CH95_A0A0V1CH95_TRIBR_45882 and tr_A0A0V0TNR6_A0A0V0TNR6_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3K373_A0A1S3K373_LINUN_7574 and tr_A0A1S3K3I2_A0A1S3K3I2_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3KX10_A0A1S3KX10_SALSA_8030 and tr_A0A1S3QH95_A0A1S3QH95_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3KX10_A0A1S3KX10_SALSA_8030 and tr_A0A1S3QLB0_A0A1S3QLB0_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3MF75_A0A1S3MF75_SALSA_8030 and tr_A0A060WJY4_A0A060WJY4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3N3T5_A0A1S3N3T5_SALSA_8030 and tr_A0A1S3S3R1_A0A1S3S3R1_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A2I4C1Q0_A0A2I4C1Q0_9TELE_52670 and tr_A0A2I4CXE1_A0A2I4CXE1_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A226NFV9_A0A226NFV9_CALSU_9009 and tr_A0A226PD13_A0A226PD13_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2A2JEY5_A0A2A2JEY5_9BILA_2018661 and tr_A0A2A2KQX5_A0A2A2KQX5_9BILA_2018661 are exactly identical! WARNING: Sequences tr_A0A2D0PXA6_A0A2D0PXA6_ICTPU_7998 and tr_A0A2D0PXB4_A0A2D0PXB4_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0PXA6_A0A2D0PXA6_ICTPU_7998 and tr_A0A2D0PZ08_A0A2D0PZ08_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0PXA6_A0A2D0PXA6_ICTPU_7998 and tr_A0A2D0PZY8_A0A2D0PZY8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0Q4A6_A0A2D0Q4A6_ICTPU_7998 and tr_A0A2D0Q5G9_A0A2D0Q5G9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0Q4A6_A0A2D0Q4A6_ICTPU_7998 and tr_A0A2D0Q853_A0A2D0Q853_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QMX3_A0A2D0QMX3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QN80_A0A2D0QN80_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QNG8_A0A2D0QNG8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QNH2_A0A2D0QNH2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QQ42_A0A2D0QQ42_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QMW3_A0A2D0QMW3_ICTPU_7998 and tr_A0A2D0QQV0_A0A2D0QQV0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RW06_A0A2D0RW06_ICTPU_7998 and tr_A0A2D0RW07_A0A2D0RW07_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RW06_A0A2D0RW06_ICTPU_7998 and tr_A0A2D0RWX1_A0A2D0RWX1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U4BKA0_A0A2U4BKA0_TURTR_9739 and tr_A0A2Y9NP74_A0A2Y9NP74_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4BKA0_A0A2U4BKA0_TURTR_9739 and tr_A0A2Y9SV87_A0A2Y9SV87_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 461 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82.raxml.reduced.phy Alignment comprises 1 partitions and 124 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 124 / 124 Gaps: 8.50 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82.raxml.rba Parallelization scheme autoconfig: 2 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 946 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 124 / 9920 [00:00:00] Data distribution: max. searches per worker: 10 Starting ML tree search with 20 distinct starting trees [00:00:00 -127022.941190] Initial branch length optimization [00:00:02 -95642.300959] Model parameter optimization (eps = 10.000000) [00:00:32 -94384.629038] AUTODETECT spr round 1 (radius: 5) [00:02:03 -59151.286313] AUTODETECT spr round 2 (radius: 10) [00:03:47 -47196.693781] AUTODETECT spr round 3 (radius: 15) [00:05:46 -35955.948223] AUTODETECT spr round 4 (radius: 20) [00:07:39 -31658.987478] AUTODETECT spr round 5 (radius: 25) [00:09:54 -26772.872262] SPR radius for FAST iterations: 25 (autodetect) [00:09:54 -26772.872262] Model parameter optimization (eps = 3.000000) [00:10:12 -26733.861189] FAST spr round 1 (radius: 25) [00:11:59 -23288.032493] FAST spr round 2 (radius: 25) [00:13:19 -23092.389452] FAST spr round 3 (radius: 25) [00:14:35 -23039.655761] FAST spr round 4 (radius: 25) [00:15:46 -23035.392511] FAST spr round 5 (radius: 25) [00:16:56 -23034.039174] FAST spr round 6 (radius: 25) [00:18:05 -23034.038280] Model parameter optimization (eps = 1.000000) [00:18:20 -23023.325102] SLOW spr round 1 (radius: 5) [00:19:36 -23019.230843] SLOW spr round 2 (radius: 5) [00:20:53 -23016.434847] SLOW spr round 3 (radius: 5) [00:22:06 -23016.433966] SLOW spr round 4 (radius: 10) [00:23:27 -23015.662465] SLOW spr round 5 (radius: 5) [00:24:55 -23013.453272] SLOW spr round 6 (radius: 5) [00:26:13 -23013.453038] SLOW spr round 7 (radius: 10) [00:27:32 -23013.452849] SLOW spr round 8 (radius: 15) [00:29:19 -23000.685226] SLOW spr round 9 (radius: 5) [00:30:52 -22998.401077] SLOW spr round 10 (radius: 5) [00:32:15 -22997.889880] SLOW spr round 11 (radius: 5) [00:33:29 -22997.889531] SLOW spr round 12 (radius: 10) [00:34:48 -22997.888757] SLOW spr round 13 (radius: 15) [00:36:35 -22997.124088] SLOW spr round 14 (radius: 5) [00:38:06 -22997.122549] SLOW spr round 15 (radius: 10) [00:39:33 -22996.980535] SLOW spr round 16 (radius: 5) [00:40:57 -22996.490858] SLOW spr round 17 (radius: 5) [00:42:13 -22996.490477] SLOW spr round 18 (radius: 10) [00:43:32 -22996.490160] SLOW spr round 19 (radius: 15) [00:45:18 -22996.489869] SLOW spr round 20 (radius: 20) [00:47:41 -22989.740782] SLOW spr round 21 (radius: 5) [00:49:13 -22989.721657] SLOW spr round 22 (radius: 10) [00:50:42 -22989.721394] SLOW spr round 23 (radius: 15) [00:52:27 -22989.721047] SLOW spr round 24 (radius: 20) [00:53:42] [worker #1] ML tree search #2, logLikelihood: -24148.581347 [00:54:55 -22989.373426] SLOW spr round 25 (radius: 5) [00:56:27 -22989.373122] SLOW spr round 26 (radius: 10) [00:57:57 -22989.372827] SLOW spr round 27 (radius: 15) [00:59:42 -22989.372523] SLOW spr round 28 (radius: 20) [01:02:11 -22988.933510] SLOW spr round 29 (radius: 5) [01:03:43 -22988.933145] SLOW spr round 30 (radius: 10) [01:05:12 -22988.932801] SLOW spr round 31 (radius: 15) [01:06:58 -22988.932446] SLOW spr round 32 (radius: 20) [01:09:27 -22988.932080] SLOW spr round 33 (radius: 25) [01:12:40 -22986.891125] SLOW spr round 34 (radius: 5) [01:14:13 -22986.500425] SLOW spr round 35 (radius: 5) [01:15:36 -22986.500423] SLOW spr round 36 (radius: 10) [01:16:58 -22986.074112] SLOW spr round 37 (radius: 5) [01:18:22 -22986.073853] SLOW spr round 38 (radius: 10) [01:19:46 -22986.073783] SLOW spr round 39 (radius: 15) [01:21:33 -22986.073773] SLOW spr round 40 (radius: 20) [01:24:05 -22983.805572] SLOW spr round 41 (radius: 5) [01:25:37 -22983.805572] SLOW spr round 42 (radius: 10) [01:27:08 -22974.532137] SLOW spr round 43 (radius: 5) [01:28:35 -22972.206659] SLOW spr round 44 (radius: 5) [01:29:53 -22971.869887] SLOW spr round 45 (radius: 5) [01:31:05 -22971.868837] SLOW spr round 46 (radius: 10) [01:32:22 -22971.868031] SLOW spr round 47 (radius: 15) [01:34:10 -22971.867213] SLOW spr round 48 (radius: 20) [01:36:38 -22971.866437] SLOW spr round 49 (radius: 25) [01:39:54 -22971.865671] Model parameter optimization (eps = 0.100000) [01:40:04] [worker #0] ML tree search #1, logLikelihood: -22971.327053 [01:40:04 -129906.548613] Initial branch length optimization [01:40:06 -98527.399851] Model parameter optimization (eps = 10.000000) [01:40:48 -97165.867784] AUTODETECT spr round 1 (radius: 5) [01:42:12 -57962.811268] AUTODETECT spr round 2 (radius: 10) [01:43:43 -43656.962146] AUTODETECT spr round 3 (radius: 15) [01:45:16 -36641.924370] AUTODETECT spr round 4 (radius: 20) [01:47:02 -31091.612052] AUTODETECT spr round 5 (radius: 25) [01:48:55 -27897.339711] SPR radius for FAST iterations: 25 (autodetect) [01:48:55 -27897.339711] Model parameter optimization (eps = 3.000000) [01:49:18 -27823.340073] FAST spr round 1 (radius: 25) [01:51:02 -23619.335446] FAST spr round 2 (radius: 25) [01:52:28 -22962.238325] FAST spr round 3 (radius: 25) [01:53:43 -22908.079676] FAST spr round 4 (radius: 25) [01:54:52 -22903.767625] FAST spr round 5 (radius: 25) [01:55:58 -22903.766453] Model parameter optimization (eps = 1.000000) [01:56:11 -22896.358337] SLOW spr round 1 (radius: 5) [01:57:24 -22892.698375] SLOW spr round 2 (radius: 5) [01:58:37 -22886.610928] SLOW spr round 3 (radius: 5) [01:59:51 -22885.561547] SLOW spr round 4 (radius: 5) [02:01:01 -22885.560604] SLOW spr round 5 (radius: 10) [02:02:23 -22877.826516] SLOW spr round 6 (radius: 5) [02:03:55 -22854.968315] SLOW spr round 7 (radius: 5) [02:05:22 -22854.581227] SLOW spr round 8 (radius: 5) [02:06:44 -22854.536159] SLOW spr round 9 (radius: 10) [02:08:12 -22853.397194] SLOW spr round 10 (radius: 5) [02:09:50 -22851.391916] SLOW spr round 11 (radius: 5) [02:10:12] [worker #1] ML tree search #4, logLikelihood: -22942.924537 [02:11:16 -22851.391071] SLOW spr round 12 (radius: 10) [02:12:45 -22851.390899] SLOW spr round 13 (radius: 15) [02:14:52 -22777.601842] SLOW spr round 14 (radius: 5) [02:16:35 -22769.042186] SLOW spr round 15 (radius: 5) [02:18:04 -22768.986642] SLOW spr round 16 (radius: 10) [02:19:35 -22768.843673] SLOW spr round 17 (radius: 5) [02:21:10 -22768.843370] SLOW spr round 18 (radius: 10) [02:22:45 -22768.843367] SLOW spr round 19 (radius: 15) [02:24:46 -22768.843365] SLOW spr round 20 (radius: 20) [02:27:23 -22768.339514] SLOW spr round 21 (radius: 5) [02:29:07 -22768.339513] SLOW spr round 22 (radius: 10) [02:30:51 -22768.339512] SLOW spr round 23 (radius: 15) [02:32:51 -22768.339511] SLOW spr round 24 (radius: 20) [02:35:30 -22768.339510] SLOW spr round 25 (radius: 25) [02:38:57 -22768.028416] SLOW spr round 26 (radius: 5) [02:40:42 -22768.009504] SLOW spr round 27 (radius: 10) [02:42:27 -22768.009469] SLOW spr round 28 (radius: 15) [02:44:27 -22767.700968] SLOW spr round 29 (radius: 5) [02:46:07 -22767.700929] SLOW spr round 30 (radius: 10) [02:47:46 -22767.700908] SLOW spr round 31 (radius: 15) [02:49:47 -22767.700896] SLOW spr round 32 (radius: 20) [02:52:24 -22766.671862] SLOW spr round 33 (radius: 5) [02:54:07 -22766.671859] SLOW spr round 34 (radius: 10) [02:55:48 -22766.671856] SLOW spr round 35 (radius: 15) [02:57:49 -22766.671854] SLOW spr round 36 (radius: 20) [03:00:28 -22766.671852] SLOW spr round 37 (radius: 25) [03:04:00 -22766.671851] Model parameter optimization (eps = 0.100000) [03:04:15] [worker #0] ML tree search #3, logLikelihood: -22765.999512 [03:04:15 -127643.697015] Initial branch length optimization [03:04:17 -97234.887638] Model parameter optimization (eps = 10.000000) [03:05:08 -95864.231636] AUTODETECT spr round 1 (radius: 5) [03:06:43 -58339.784799] AUTODETECT spr round 2 (radius: 10) [03:08:31 -43008.053672] AUTODETECT spr round 3 (radius: 15) [03:10:18 -34479.092775] AUTODETECT spr round 4 (radius: 20) [03:12:15 -29757.428055] AUTODETECT spr round 5 (radius: 25) [03:14:25 -27337.377374] SPR radius for FAST iterations: 25 (autodetect) [03:14:25 -27337.377374] Model parameter optimization (eps = 3.000000) [03:14:43 -27265.283463] FAST spr round 1 (radius: 25) [03:16:40 -23218.558761] FAST spr round 2 (radius: 25) [03:18:13 -23030.159609] FAST spr round 3 (radius: 25) [03:19:40 -22792.447145] FAST spr round 4 (radius: 25) [03:21:02 -22780.209074] FAST spr round 5 (radius: 25) [03:22:21 -22780.208220] Model parameter optimization (eps = 1.000000) [03:22:36 -22768.394157] SLOW spr round 1 (radius: 5) [03:24:03 -22762.366480] SLOW spr round 2 (radius: 5) [03:25:31 -22761.084489] SLOW spr round 3 (radius: 5) [03:26:55 -22761.083753] SLOW spr round 4 (radius: 10) [03:28:29 -22752.892844] SLOW spr round 5 (radius: 5) [03:30:09 -22745.561830] SLOW spr round 6 (radius: 5) [03:31:41 -22742.889702] SLOW spr round 7 (radius: 5) [03:32:47] [worker #1] ML tree search #6, logLikelihood: -22751.525239 [03:33:09 -22741.005323] SLOW spr round 8 (radius: 5) [03:34:37 -22739.936642] SLOW spr round 9 (radius: 5) [03:36:01 -22739.935763] SLOW spr round 10 (radius: 10) [03:37:36 -22736.943309] SLOW spr round 11 (radius: 5) [03:39:15 -22736.942561] SLOW spr round 12 (radius: 10) [03:40:56 -22736.081890] SLOW spr round 13 (radius: 5) [03:42:34 -22734.609519] SLOW spr round 14 (radius: 5) [03:44:05 -22733.793613] SLOW spr round 15 (radius: 5) [03:45:31 -22733.793181] SLOW spr round 16 (radius: 10) [03:47:03 -22733.792841] SLOW spr round 17 (radius: 15) [03:49:11 -22732.040777] SLOW spr round 18 (radius: 5) [03:50:57 -22731.295674] SLOW spr round 19 (radius: 5) [03:52:31 -22730.602540] SLOW spr round 20 (radius: 5) [03:53:58 -22730.601287] SLOW spr round 21 (radius: 10) [03:55:31 -22730.600873] SLOW spr round 22 (radius: 15) [03:57:37 -22730.093124] SLOW spr round 23 (radius: 5) [03:59:20 -22730.091898] SLOW spr round 24 (radius: 10) [04:01:04 -22730.091783] SLOW spr round 25 (radius: 15) [04:03:08 -22730.091767] SLOW spr round 26 (radius: 20) [04:05:48 -22728.684296] SLOW spr round 27 (radius: 5) [04:07:34 -22728.465193] SLOW spr round 28 (radius: 5) [04:09:09 -22728.465167] SLOW spr round 29 (radius: 10) [04:10:44 -22728.465164] SLOW spr round 30 (radius: 15) [04:12:48 -22728.465163] SLOW spr round 31 (radius: 20) [04:15:25 -22728.465162] SLOW spr round 32 (radius: 25) [04:18:58 -22719.839770] SLOW spr round 33 (radius: 5) [04:20:44 -22719.839701] SLOW spr round 34 (radius: 10) [04:22:31 -22719.839679] SLOW spr round 35 (radius: 15) [04:24:33 -22719.839662] SLOW spr round 36 (radius: 20) [04:27:11 -22719.839649] SLOW spr round 37 (radius: 25) [04:30:43 -22719.839639] Model parameter optimization (eps = 0.100000) [04:30:54] [worker #0] ML tree search #5, logLikelihood: -22719.099060 [04:30:54 -129449.870180] Initial branch length optimization [04:30:56 -97728.362717] Model parameter optimization (eps = 10.000000) [04:31:37 -96671.049153] AUTODETECT spr round 1 (radius: 5) [04:33:11 -59618.312295] AUTODETECT spr round 2 (radius: 10) [04:34:57 -45540.770787] AUTODETECT spr round 3 (radius: 15) [04:36:47 -37287.935440] AUTODETECT spr round 4 (radius: 20) [04:38:44 -31934.131853] AUTODETECT spr round 5 (radius: 25) [04:40:51 -30667.762853] SPR radius for FAST iterations: 25 (autodetect) [04:40:51 -30667.762853] Model parameter optimization (eps = 3.000000) [04:41:16 -30641.886899] FAST spr round 1 (radius: 25) [04:43:16 -26282.013512] FAST spr round 2 (radius: 25) [04:44:54 -25225.108545] FAST spr round 3 (radius: 25) [04:46:22 -25095.414020] FAST spr round 4 (radius: 25) [04:47:48 -25087.110600] FAST spr round 5 (radius: 25) [04:49:11 -25087.110191] Model parameter optimization (eps = 1.000000) [04:49:28 -25072.075588] SLOW spr round 1 (radius: 5) [04:50:57 -25065.038785] SLOW spr round 2 (radius: 5) [04:52:23 -25063.888750] SLOW spr round 3 (radius: 5) [04:53:49 -25063.881073] SLOW spr round 4 (radius: 10) [04:55:20 -25063.332249] SLOW spr round 5 (radius: 5) [04:57:00 -25060.324676] SLOW spr round 6 (radius: 5) [04:58:30 -25060.323914] SLOW spr round 7 (radius: 10) [05:00:03 -25060.323579] SLOW spr round 8 (radius: 15) [05:02:05 -25057.517433] SLOW spr round 9 (radius: 5) [05:03:51 -25057.515513] SLOW spr round 10 (radius: 10) [05:05:31 -25057.515098] SLOW spr round 11 (radius: 15) [05:07:33 -25057.514834] SLOW spr round 12 (radius: 20) [05:10:10 -25055.129731] SLOW spr round 13 (radius: 5) [05:11:59 -25055.059484] SLOW spr round 14 (radius: 10) [05:13:46 -25055.058108] SLOW spr round 15 (radius: 15) [05:14:09] [worker #1] ML tree search #8, logLikelihood: -23239.537916 [05:15:48 -25055.057364] SLOW spr round 16 (radius: 20) [05:18:31 -25055.056708] SLOW spr round 17 (radius: 25) [05:22:16 -24339.205457] SLOW spr round 18 (radius: 5) [05:24:07 -23533.810057] SLOW spr round 19 (radius: 5) [05:25:47 -23441.961564] SLOW spr round 20 (radius: 5) [05:27:17 -23441.268344] SLOW spr round 21 (radius: 5) [05:28:42 -23441.268005] SLOW spr round 22 (radius: 10) [05:30:16 -23425.335463] SLOW spr round 23 (radius: 5) [05:31:59 -23410.696136] SLOW spr round 24 (radius: 5) [05:33:30 -23410.695409] SLOW spr round 25 (radius: 10) [05:35:04 -23410.695373] SLOW spr round 26 (radius: 15) [05:37:10 -23395.796428] SLOW spr round 27 (radius: 5) [05:38:56 -23395.380826] SLOW spr round 28 (radius: 5) [05:40:29 -23395.380622] SLOW spr round 29 (radius: 10) [05:42:01 -23395.380607] SLOW spr round 30 (radius: 15) [05:44:03 -23395.380600] SLOW spr round 31 (radius: 20) [05:47:00 -23394.983054] SLOW spr round 32 (radius: 5) [05:48:46 -23394.973997] SLOW spr round 33 (radius: 10) [05:50:33 -23391.534544] SLOW spr round 34 (radius: 5) [05:52:13 -23389.583586] SLOW spr round 35 (radius: 5) [05:53:41 -23389.427130] SLOW spr round 36 (radius: 5) [05:55:05 -23389.423735] SLOW spr round 37 (radius: 10) [05:56:36 -23389.422247] SLOW spr round 38 (radius: 15) [05:58:38 -23389.421624] SLOW spr round 39 (radius: 20) [06:01:28 -23389.342969] SLOW spr round 40 (radius: 25) [06:05:20 -23195.160213] SLOW spr round 41 (radius: 5) [06:07:08 -23128.987200] SLOW spr round 42 (radius: 5) [06:08:45 -23127.904295] SLOW spr round 43 (radius: 5) [06:10:11 -23127.904136] SLOW spr round 44 (radius: 10) [06:11:41 -23127.489997] SLOW spr round 45 (radius: 5) [06:13:17 -23127.489963] SLOW spr round 46 (radius: 10) [06:14:51 -23127.489949] SLOW spr round 47 (radius: 15) [06:16:51 -23127.489939] SLOW spr round 48 (radius: 20) [06:19:42 -23127.462327] SLOW spr round 49 (radius: 25) [06:23:30 -23126.381023] SLOW spr round 50 (radius: 5) [06:25:16 -23126.380366] SLOW spr round 51 (radius: 10) [06:27:00 -23126.380284] SLOW spr round 52 (radius: 15) [06:29:00 -23126.380254] SLOW spr round 53 (radius: 20) [06:31:53 -23126.380234] SLOW spr round 54 (radius: 25) [06:35:44 -23126.380214] Model parameter optimization (eps = 0.100000) [06:36:00] [worker #0] ML tree search #7, logLikelihood: -23120.181929 [06:36:00 -129068.907040] Initial branch length optimization [06:36:02 -97099.414742] Model parameter optimization (eps = 10.000000) [06:36:48 -95749.513156] AUTODETECT spr round 1 (radius: 5) [06:38:21 -59101.431159] AUTODETECT spr round 2 (radius: 10) [06:40:10 -45372.051551] AUTODETECT spr round 3 (radius: 15) [06:42:04 -39733.020304] AUTODETECT spr round 4 (radius: 20) [06:44:05 -35097.023603] AUTODETECT spr round 5 (radius: 25) [06:46:25 -30733.596722] SPR radius for FAST iterations: 25 (autodetect) [06:46:25 -30733.596722] Model parameter optimization (eps = 3.000000) [06:46:47 -30653.114657] FAST spr round 1 (radius: 25) [06:48:54 -23987.542343] FAST spr round 2 (radius: 25) [06:50:30 -23030.431078] FAST spr round 3 (radius: 25) [06:51:57 -22777.608990] FAST spr round 4 (radius: 25) [06:53:20 -22765.878225] FAST spr round 5 (radius: 25) [06:54:38 -22759.569422] FAST spr round 6 (radius: 25) [06:55:55 -22758.765828] FAST spr round 7 (radius: 25) [06:57:12 -22758.765168] Model parameter optimization (eps = 1.000000) [06:57:23 -22755.600240] SLOW spr round 1 (radius: 5) [06:58:49 -22752.159023] SLOW spr round 2 (radius: 5) [07:00:14 -22751.801006] SLOW spr round 3 (radius: 5) [07:01:38 -22751.800630] SLOW spr round 4 (radius: 10) [07:03:09 -22750.049752] SLOW spr round 5 (radius: 5) [07:04:49 -22747.642529] SLOW spr round 6 (radius: 5) [07:06:21 -22747.641676] SLOW spr round 7 (radius: 10) [07:07:53 -22747.641640] SLOW spr round 8 (radius: 15) [07:09:56 -22745.587277] SLOW spr round 9 (radius: 5) [07:11:41 -22741.281909] SLOW spr round 10 (radius: 5) [07:13:14 -22741.189818] SLOW spr round 11 (radius: 10) [07:14:47 -22739.691295] SLOW spr round 12 (radius: 5) [07:15:43] [worker #1] ML tree search #10, logLikelihood: -22772.009412 [07:16:25 -22739.690570] SLOW spr round 13 (radius: 10) [07:18:03 -22739.690510] SLOW spr round 14 (radius: 15) [07:20:05 -22739.682127] SLOW spr round 15 (radius: 20) [07:22:45 -22738.528575] SLOW spr round 16 (radius: 5) [07:24:30 -22738.528302] SLOW spr round 17 (radius: 10) [07:26:14 -22738.528276] SLOW spr round 18 (radius: 15) [07:28:14 -22738.528255] SLOW spr round 19 (radius: 20) [07:30:56 -22738.528233] SLOW spr round 20 (radius: 25) [07:34:19 -22737.410593] SLOW spr round 21 (radius: 5) [07:36:06 -22737.152181] SLOW spr round 22 (radius: 5) [07:37:40 -22737.151735] SLOW spr round 23 (radius: 10) [07:39:15 -22737.151554] SLOW spr round 24 (radius: 15) [07:41:17 -22737.151422] SLOW spr round 25 (radius: 20) [07:43:55 -22737.151317] SLOW spr round 26 (radius: 25) [07:47:16 -22737.151234] Model parameter optimization (eps = 0.100000) [07:47:22] [worker #0] ML tree search #9, logLikelihood: -22737.072539 [07:47:22 -129229.047568] Initial branch length optimization [07:47:25 -97429.539208] Model parameter optimization (eps = 10.000000) [07:48:12 -96163.429560] AUTODETECT spr round 1 (radius: 5) [07:50:00 -60073.119652] AUTODETECT spr round 2 (radius: 10) [07:51:53 -45952.432171] AUTODETECT spr round 3 (radius: 15) [07:53:52 -36999.462780] AUTODETECT spr round 4 (radius: 20) [07:56:07 -30122.728690] AUTODETECT spr round 5 (radius: 25) [07:58:30 -27554.340128] SPR radius for FAST iterations: 25 (autodetect) [07:58:30 -27554.340128] Model parameter optimization (eps = 3.000000) [07:58:56 -27514.037717] FAST spr round 1 (radius: 25) [08:01:03 -23934.573344] FAST spr round 2 (radius: 25) [08:02:47 -23496.604594] FAST spr round 3 (radius: 25) [08:04:24 -23484.088873] FAST spr round 4 (radius: 25) [08:05:55 -23483.731683] FAST spr round 5 (radius: 25) [08:07:25 -23483.731314] Model parameter optimization (eps = 1.000000) [08:07:46 -23474.458113] SLOW spr round 1 (radius: 5) [08:09:23 -23471.065437] SLOW spr round 2 (radius: 5) [08:10:59 -23469.663024] SLOW spr round 3 (radius: 5) [08:12:32 -23469.662995] SLOW spr round 4 (radius: 10) [08:14:16 -23467.703989] SLOW spr round 5 (radius: 5) [08:16:06 -23467.672061] SLOW spr round 6 (radius: 10) [08:17:57 -23466.914424] SLOW spr round 7 (radius: 5) [08:19:46 -23466.812619] SLOW spr round 8 (radius: 5) [08:21:25 -23466.396960] SLOW spr round 9 (radius: 5) [08:22:59 -23466.396943] SLOW spr round 10 (radius: 10) [08:24:41 -23466.396928] SLOW spr round 11 (radius: 15) [08:27:02 -23462.131339] SLOW spr round 12 (radius: 5) [08:28:57 -23462.042158] SLOW spr round 13 (radius: 10) [08:30:51 -23462.041986] SLOW spr round 14 (radius: 15) [08:33:07 -23462.041940] SLOW spr round 15 (radius: 20) [08:35:57 -23457.304303] SLOW spr round 16 (radius: 5) [08:36:07] [worker #1] ML tree search #12, logLikelihood: -22808.204852 [08:37:55 -23457.303305] SLOW spr round 17 (radius: 10) [08:39:51 -23457.303161] SLOW spr round 18 (radius: 15) [08:42:06 -23457.303097] SLOW spr round 19 (radius: 20) [08:44:55 -23457.303047] SLOW spr round 20 (radius: 25) [08:48:35 -23451.798369] SLOW spr round 21 (radius: 5) [08:50:34 -23451.798325] SLOW spr round 22 (radius: 10) [08:52:33 -23451.798283] SLOW spr round 23 (radius: 15) [08:54:48 -23451.798240] SLOW spr round 24 (radius: 20) [08:57:34 -23451.798198] SLOW spr round 25 (radius: 25) [09:01:06 -23451.798156] Model parameter optimization (eps = 0.100000) [09:01:12] [worker #0] ML tree search #11, logLikelihood: -23451.751132 [09:01:12 -129022.539948] Initial branch length optimization [09:01:14 -97207.940727] Model parameter optimization (eps = 10.000000) [09:02:14 -95771.367581] AUTODETECT spr round 1 (radius: 5) [09:04:00 -58108.337897] AUTODETECT spr round 2 (radius: 10) [09:05:56 -43972.474890] AUTODETECT spr round 3 (radius: 15) [09:07:57 -34552.797793] AUTODETECT spr round 4 (radius: 20) [09:10:01 -31738.957505] AUTODETECT spr round 5 (radius: 25) [09:12:11 -30517.865718] SPR radius for FAST iterations: 25 (autodetect) [09:12:11 -30517.865718] Model parameter optimization (eps = 3.000000) [09:12:38 -30446.107381] FAST spr round 1 (radius: 25) [09:14:50 -25945.443749] FAST spr round 2 (radius: 25) [09:16:47 -25266.023863] FAST spr round 3 (radius: 25) [09:18:28 -24757.331148] FAST spr round 4 (radius: 25) [09:20:02 -23924.164600] FAST spr round 5 (radius: 25) [09:21:39 -23422.701258] FAST spr round 6 (radius: 25) [09:23:12 -23416.062498] FAST spr round 7 (radius: 25) [09:24:43 -23416.061647] Model parameter optimization (eps = 1.000000) [09:25:04 -23402.848988] SLOW spr round 1 (radius: 5) [09:26:40 -23401.091076] SLOW spr round 2 (radius: 5) [09:28:18 -23393.316808] SLOW spr round 3 (radius: 5) [09:29:55 -23379.637412] SLOW spr round 4 (radius: 5) [09:31:32 -23376.834958] SLOW spr round 5 (radius: 5) [09:33:05 -23376.833978] SLOW spr round 6 (radius: 10) [09:34:54 -23007.153530] SLOW spr round 7 (radius: 5) [09:36:47 -22903.460780] SLOW spr round 8 (radius: 5) [09:38:30 -22890.952872] SLOW spr round 9 (radius: 5) [09:40:10 -22887.930788] SLOW spr round 10 (radius: 5) [09:41:46 -22887.375375] SLOW spr round 11 (radius: 5) [09:43:20 -22887.052889] SLOW spr round 12 (radius: 5) [09:44:54 -22887.052347] SLOW spr round 13 (radius: 10) [09:46:42 -22879.841274] SLOW spr round 14 (radius: 5) [09:48:34 -22877.403835] SLOW spr round 15 (radius: 5) [09:50:14 -22877.402320] SLOW spr round 16 (radius: 10) [09:51:58 -22876.842377] SLOW spr round 17 (radius: 5) [09:53:46 -22876.842341] SLOW spr round 18 (radius: 10) [09:55:35 -22876.597634] SLOW spr round 19 (radius: 5) [09:57:23 -22876.597595] SLOW spr round 20 (radius: 10) [09:59:11 -22876.597590] SLOW spr round 21 (radius: 15) [10:01:27 -22875.028279] SLOW spr round 22 (radius: 5) [10:03:23 -22874.944660] SLOW spr round 23 (radius: 10) [10:05:16 -22874.944068] SLOW spr round 24 (radius: 15) [10:07:30 -22874.944029] SLOW spr round 25 (radius: 20) [10:10:24 -22874.944027] SLOW spr round 26 (radius: 25) [10:14:11 -22866.350955] SLOW spr round 27 (radius: 5) [10:16:12 -22866.127544] SLOW spr round 28 (radius: 5) [10:17:58 -22866.125770] SLOW spr round 29 (radius: 10) [10:19:48 -22862.939270] SLOW spr round 30 (radius: 5) [10:21:40 -22854.693004] SLOW spr round 31 (radius: 5) [10:23:21 -22854.425784] SLOW spr round 32 (radius: 5) [10:24:56 -22854.425353] SLOW spr round 33 (radius: 10) [10:25:42] [worker #1] ML tree search #14, logLikelihood: -22734.156641 [10:26:38 -22854.425323] SLOW spr round 34 (radius: 15) [10:28:55 -22854.425313] SLOW spr round 35 (radius: 20) [10:31:50 -22854.425308] SLOW spr round 36 (radius: 25) [10:35:37 -22780.396939] SLOW spr round 37 (radius: 5) [10:37:39 -22778.407710] SLOW spr round 38 (radius: 5) [10:39:26 -22778.407315] SLOW spr round 39 (radius: 10) [10:41:12 -22778.407225] SLOW spr round 40 (radius: 15) [10:43:26 -22778.407167] SLOW spr round 41 (radius: 20) [10:46:19 -22773.117490] SLOW spr round 42 (radius: 5) [10:48:16 -22773.117442] SLOW spr round 43 (radius: 10) [10:50:11 -22773.117408] SLOW spr round 44 (radius: 15) [10:52:23 -22773.117378] SLOW spr round 45 (radius: 20) [10:55:13 -22773.117352] SLOW spr round 46 (radius: 25) [10:58:57 -22772.347599] SLOW spr round 47 (radius: 5) [11:00:55 -22772.347585] SLOW spr round 48 (radius: 10) [11:02:53 -22772.347582] SLOW spr round 49 (radius: 15) [11:05:06 -22772.347580] SLOW spr round 50 (radius: 20) [11:07:59 -22770.722473] SLOW spr round 51 (radius: 5) [11:09:56 -22770.722342] SLOW spr round 52 (radius: 10) [11:11:51 -22770.722341] SLOW spr round 53 (radius: 15) [11:14:04 -22770.722341] SLOW spr round 54 (radius: 20) [11:16:56 -22770.722327] SLOW spr round 55 (radius: 25) [11:20:39 -22770.722327] Model parameter optimization (eps = 0.100000) [11:20:54] [worker #0] ML tree search #13, logLikelihood: -22768.086449 [11:20:54 -128713.516635] Initial branch length optimization [11:20:57 -97417.538613] Model parameter optimization (eps = 10.000000) [11:21:28 -96203.909992] AUTODETECT spr round 1 (radius: 5) [11:23:14 -58972.174437] AUTODETECT spr round 2 (radius: 10) [11:25:04 -44190.119917] AUTODETECT spr round 3 (radius: 15) [11:27:01 -37105.903442] AUTODETECT spr round 4 (radius: 20) [11:29:20 -30431.310638] AUTODETECT spr round 5 (radius: 25) [11:31:21 -27790.151488] SPR radius for FAST iterations: 25 (autodetect) [11:31:21 -27790.151488] Model parameter optimization (eps = 3.000000) [11:31:48 -27748.139244] FAST spr round 1 (radius: 25) [11:33:51 -24371.061391] FAST spr round 2 (radius: 25) [11:35:34 -24032.995426] FAST spr round 3 (radius: 25) [11:37:07 -23952.235500] FAST spr round 4 (radius: 25) [11:38:30 -23950.460527] FAST spr round 5 (radius: 25) [11:39:50 -23950.458837] Model parameter optimization (eps = 1.000000) [11:40:10 -23943.166353] SLOW spr round 1 (radius: 5) [11:41:38 -23939.067756] SLOW spr round 2 (radius: 5) [11:43:05 -23938.081190] SLOW spr round 3 (radius: 5) [11:43:46] [worker #1] ML tree search #16, logLikelihood: -22996.391875 [11:44:31 -23938.080569] SLOW spr round 4 (radius: 10) [11:46:04 -23936.526550] SLOW spr round 5 (radius: 5) [11:47:46 -23933.477052] SLOW spr round 6 (radius: 5) [11:49:18 -23932.875165] SLOW spr round 7 (radius: 5) [11:50:44 -23932.742188] SLOW spr round 8 (radius: 5) [11:52:10 -23932.741888] SLOW spr round 9 (radius: 10) [11:53:42 -23932.741792] SLOW spr round 10 (radius: 15) [11:55:58 -23673.722420] SLOW spr round 11 (radius: 5) [11:57:53 -23374.177583] SLOW spr round 12 (radius: 5) [11:59:33 -23361.197683] SLOW spr round 13 (radius: 5) [12:01:03 -23359.951871] SLOW spr round 14 (radius: 5) [12:02:30 -23359.364571] SLOW spr round 15 (radius: 5) [12:03:57 -23359.363747] SLOW spr round 16 (radius: 10) [12:05:29 -23359.363649] SLOW spr round 17 (radius: 15) [12:07:37 -23255.148070] SLOW spr round 18 (radius: 5) [12:09:31 -23145.112729] SLOW spr round 19 (radius: 5) [12:11:08 -23144.499418] SLOW spr round 20 (radius: 5) [12:12:37 -23142.759479] SLOW spr round 21 (radius: 5) [12:14:05 -23142.546122] SLOW spr round 22 (radius: 5) [12:15:31 -23142.491344] SLOW spr round 23 (radius: 10) [12:17:03 -23142.478277] SLOW spr round 24 (radius: 15) [12:19:08 -23142.284098] SLOW spr round 25 (radius: 5) [12:20:53 -23142.225135] SLOW spr round 26 (radius: 10) [12:22:38 -23134.195345] SLOW spr round 27 (radius: 5) [12:24:15 -23134.195149] SLOW spr round 28 (radius: 10) [12:25:51 -23134.195122] SLOW spr round 29 (radius: 15) [12:27:56 -23134.195118] SLOW spr round 30 (radius: 20) [12:30:35 -23134.195113] SLOW spr round 31 (radius: 25) [12:33:56 -23089.362581] SLOW spr round 32 (radius: 5) [12:35:43 -23089.362559] SLOW spr round 33 (radius: 10) [12:37:29 -23085.650932] SLOW spr round 34 (radius: 5) [12:39:06 -23085.649827] SLOW spr round 35 (radius: 10) [12:40:42 -23085.649690] SLOW spr round 36 (radius: 15) [12:42:45 -23085.649668] SLOW spr round 37 (radius: 20) [12:45:24 -23085.649660] SLOW spr round 38 (radius: 25) [12:47:10] [worker #1] ML tree search #18, logLikelihood: -23233.228653 [12:48:42 -23085.649654] Model parameter optimization (eps = 0.100000) [12:48:55] [worker #0] ML tree search #15, logLikelihood: -23084.623600 [12:48:55 -128856.842211] Initial branch length optimization [12:48:58 -97361.647385] Model parameter optimization (eps = 10.000000) [12:49:49 -95851.288421] AUTODETECT spr round 1 (radius: 5) [12:51:25 -59283.333606] AUTODETECT spr round 2 (radius: 10) [12:53:13 -45929.449051] AUTODETECT spr round 3 (radius: 15) [12:55:05 -37247.372381] AUTODETECT spr round 4 (radius: 20) [12:57:03 -33662.192649] AUTODETECT spr round 5 (radius: 25) [12:59:15 -31025.323417] SPR radius for FAST iterations: 25 (autodetect) [12:59:15 -31025.323417] Model parameter optimization (eps = 3.000000) [12:59:38 -30969.625594] FAST spr round 1 (radius: 25) [13:01:45 -24952.485889] FAST spr round 2 (radius: 25) [13:03:22 -24103.497902] FAST spr round 3 (radius: 25) [13:04:49 -23950.789064] FAST spr round 4 (radius: 25) [13:06:13 -23931.085931] FAST spr round 5 (radius: 25) [13:07:34 -23930.690192] FAST spr round 6 (radius: 25) [13:08:53 -23929.788912] FAST spr round 7 (radius: 25) [13:10:12 -23929.788825] Model parameter optimization (eps = 1.000000) [13:10:28 -23908.314495] SLOW spr round 1 (radius: 5) [13:11:53 -23905.077263] SLOW spr round 2 (radius: 5) [13:13:18 -23903.057594] SLOW spr round 3 (radius: 5) [13:14:39 -23903.057216] SLOW spr round 4 (radius: 10) [13:16:12 -23899.324943] SLOW spr round 5 (radius: 5) [13:17:51 -23897.345999] SLOW spr round 6 (radius: 5) [13:19:18 -23897.344245] SLOW spr round 7 (radius: 10) [13:20:49 -23891.882524] SLOW spr round 8 (radius: 5) [13:22:27 -23887.113634] SLOW spr round 9 (radius: 5) [13:23:53 -23887.113070] SLOW spr round 10 (radius: 10) [13:25:23 -23887.112964] SLOW spr round 11 (radius: 15) [13:27:31 -23881.408013] SLOW spr round 12 (radius: 5) [13:29:13 -23879.167446] SLOW spr round 13 (radius: 5) [13:30:47 -23877.256009] SLOW spr round 14 (radius: 5) [13:32:10 -23877.254696] SLOW spr round 15 (radius: 10) [13:33:40 -23874.545738] SLOW spr round 16 (radius: 5) [13:35:15 -23874.528922] SLOW spr round 17 (radius: 10) [13:36:53 -23873.153447] SLOW spr round 18 (radius: 5) [13:38:27 -23873.151088] SLOW spr round 19 (radius: 10) [13:40:02 -23873.150835] SLOW spr round 20 (radius: 15) [13:42:19 -23275.280212] SLOW spr round 21 (radius: 5) [13:44:06 -23045.533349] SLOW spr round 22 (radius: 5) [13:45:41 -23024.157279] SLOW spr round 23 (radius: 5) [13:47:09 -23022.941263] SLOW spr round 24 (radius: 5) [13:48:30 -23022.938998] SLOW spr round 25 (radius: 10) [13:50:02 -22888.696556] SLOW spr round 26 (radius: 5) [13:51:39 -22882.891844] SLOW spr round 27 (radius: 5) [13:53:07 -22877.591083] SLOW spr round 28 (radius: 5) [13:54:28 -22877.591034] SLOW spr round 29 (radius: 10) [13:55:58 -22877.591007] SLOW spr round 30 (radius: 15) [13:58:06 -22851.050150] SLOW spr round 31 (radius: 5) [13:59:51 -22846.827537] SLOW spr round 32 (radius: 5) [14:01:23 -22846.102215] SLOW spr round 33 (radius: 5) [14:02:47 -22846.099625] SLOW spr round 34 (radius: 10) [14:04:18 -22845.560071] SLOW spr round 35 (radius: 5) [14:05:53 -22845.556905] SLOW spr round 36 (radius: 10) [14:07:31 -22845.556717] SLOW spr round 37 (radius: 15) [14:09:34 -22845.556684] SLOW spr round 38 (radius: 20) [14:12:23 -22843.284165] SLOW spr round 39 (radius: 5) [14:14:07 -22796.967680] SLOW spr round 40 (radius: 5) [14:15:39 -22796.960801] SLOW spr round 41 (radius: 10) [14:17:11 -22795.441504] SLOW spr round 42 (radius: 5) [14:18:46 -22795.437367] SLOW spr round 43 (radius: 10) [14:20:22 -22795.435916] SLOW spr round 44 (radius: 15) [14:22:26 -22795.434545] SLOW spr round 45 (radius: 20) [14:25:17 -22794.683560] SLOW spr round 46 (radius: 5) [14:26:59 -22794.681797] SLOW spr round 47 (radius: 10) [14:28:43 -22794.681594] SLOW spr round 48 (radius: 15) [14:30:46 -22794.679632] SLOW spr round 49 (radius: 20) [14:32:02] [worker #1] ML tree search #20, logLikelihood: -22735.879803 [14:33:34 -22794.679624] SLOW spr round 50 (radius: 25) [14:37:08 -22787.255159] SLOW spr round 51 (radius: 5) [14:38:52 -22782.999177] SLOW spr round 52 (radius: 5) [14:40:24 -22781.390848] SLOW spr round 53 (radius: 5) [14:41:48 -22781.390614] SLOW spr round 54 (radius: 10) [14:43:17 -22781.390607] SLOW spr round 55 (radius: 15) [14:45:19 -22781.390604] SLOW spr round 56 (radius: 20) [14:48:04 -22779.840039] SLOW spr round 57 (radius: 5) [14:49:45 -22779.838306] SLOW spr round 58 (radius: 10) [14:51:27 -22779.838125] SLOW spr round 59 (radius: 15) [14:53:28 -22779.838099] SLOW spr round 60 (radius: 20) [14:56:13 -22779.838091] SLOW spr round 61 (radius: 25) [14:59:41 -22779.838086] Model parameter optimization (eps = 0.100000) [14:59:54] [worker #0] ML tree search #17, logLikelihood: -22779.158020 [14:59:54 -128875.693947] Initial branch length optimization [14:59:57 -97143.116281] Model parameter optimization (eps = 10.000000) [15:00:27 -96066.596668] AUTODETECT spr round 1 (radius: 5) [15:01:59 -58329.150171] AUTODETECT spr round 2 (radius: 10) [15:03:44 -42454.923882] AUTODETECT spr round 3 (radius: 15) [15:05:26 -37181.661745] AUTODETECT spr round 4 (radius: 20) [15:07:25 -32941.164996] AUTODETECT spr round 5 (radius: 25) [15:09:28 -30472.670835] SPR radius for FAST iterations: 25 (autodetect) [15:09:28 -30472.670835] Model parameter optimization (eps = 3.000000) [15:09:46 -30435.744242] FAST spr round 1 (radius: 25) [15:11:42 -25217.054031] FAST spr round 2 (radius: 25) [15:13:16 -24347.968737] FAST spr round 3 (radius: 25) [15:14:39 -23408.390538] FAST spr round 4 (radius: 25) [15:15:56 -22854.249059] FAST spr round 5 (radius: 25) [15:17:17 -22796.675090] FAST spr round 6 (radius: 25) [15:18:33 -22778.424994] FAST spr round 7 (radius: 25) [15:19:49 -22776.839239] FAST spr round 8 (radius: 25) [15:21:03 -22776.839139] Model parameter optimization (eps = 1.000000) [15:21:19 -22755.298775] SLOW spr round 1 (radius: 5) [15:22:41 -22751.363136] SLOW spr round 2 (radius: 5) [15:24:05 -22747.067645] SLOW spr round 3 (radius: 5) [15:25:24 -22747.067293] SLOW spr round 4 (radius: 10) [15:26:53 -22738.270639] SLOW spr round 5 (radius: 5) [15:28:29 -22735.329126] SLOW spr round 6 (radius: 5) [15:29:54 -22735.328247] SLOW spr round 7 (radius: 10) [15:31:24 -22734.984724] SLOW spr round 8 (radius: 5) [15:32:57 -22734.984548] SLOW spr round 9 (radius: 10) [15:34:31 -22734.984465] SLOW spr round 10 (radius: 15) [15:36:39 -22712.397659] SLOW spr round 11 (radius: 5) [15:38:19 -22712.138877] SLOW spr round 12 (radius: 5) [15:39:47 -22712.127452] SLOW spr round 13 (radius: 10) [15:41:18 -22711.636504] SLOW spr round 14 (radius: 5) [15:42:50 -22711.636478] SLOW spr round 15 (radius: 10) [15:44:25 -22711.426908] SLOW spr round 16 (radius: 5) [15:46:00 -22711.194660] SLOW spr round 17 (radius: 5) [15:47:24 -22711.194636] SLOW spr round 18 (radius: 10) [15:48:53 -22711.194631] SLOW spr round 19 (radius: 15) [15:51:00 -22711.194628] SLOW spr round 20 (radius: 20) [15:54:06 -22704.171684] SLOW spr round 21 (radius: 5) [15:55:49 -22704.168983] SLOW spr round 22 (radius: 10) [15:57:32 -22702.837210] SLOW spr round 23 (radius: 5) [15:59:06 -22702.836520] SLOW spr round 24 (radius: 10) [16:00:40 -22702.836325] SLOW spr round 25 (radius: 15) [16:02:45 -22702.836257] SLOW spr round 26 (radius: 20) [16:05:45 -22702.836232] SLOW spr round 27 (radius: 25) [16:09:33 -22702.225035] SLOW spr round 28 (radius: 5) [16:11:17 -22702.225030] SLOW spr round 29 (radius: 10) [16:13:02 -22702.225029] SLOW spr round 30 (radius: 15) [16:15:06 -22702.225028] SLOW spr round 31 (radius: 20) [16:18:06 -22702.225028] SLOW spr round 32 (radius: 25) [16:21:54 -22702.225027] Model parameter optimization (eps = 0.100000) [16:22:09] [worker #0] ML tree search #19, logLikelihood: -22701.203917 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.266906,0.711268) (0.321037,0.794619) (0.371741,0.994297) (0.040316,4.599566) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -22701.203917 AIC score: 49192.407834 / AICc score: 7235032.407834 / BIC score: 54536.841401 Free parameters (model + branch lengths): 1895 WARNING: Number of free parameters (K=1895) is larger than alignment size (n=124). This might lead to overfitting and compromise tree inference results! WARNING: Best ML tree contains 561 near-zero branches! Best ML tree with collapsed near-zero branches saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82.raxml.bestTreeCollapsed Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9NR82/3_mltree/Q9NR82.raxml.log Analysis started: 06-Jul-2021 10:38:23 / finished: 07-Jul-2021 03:00:32 Elapsed time: 58929.477 seconds Consumed energy: 4822.278 Wh (= 24 km in an electric car, or 121 km with an e-scooter!)