RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 12-Jul-2021 17:15:03 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/2_msa/Q9H902_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/3_mltree/Q9H902.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/4_raxmlng_ancestral/Q9H902 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626099303 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/2_msa/Q9H902_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 201 sites WARNING: Sequences tr_M3YD65_M3YD65_MUSPF_9669 and tr_A0A2Y9IK63_A0A2Y9IK63_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A0B4JCU3_A0A0B4JCU3_DROME_7227 and tr_A0A1W4VCQ7_A0A1W4VCQ7_DROFC_30025 are exactly identical! WARNING: Sequences tr_A0A2I2YAD9_A0A2I2YAD9_GORGO_9595 and sp_Q00765_REEP5_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2YAD9_A0A2I2YAD9_GORGO_9595 and tr_F6VJ89_F6VJ89_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I2YAD9_A0A2I2YAD9_GORGO_9595 and tr_A0A0D9RQZ8_A0A0D9RQZ8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I2YES5_A0A2I2YES5_GORGO_9595 and tr_A0A2R9BZ28_A0A2R9BZ28_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QPB5_G3QPB5_GORGO_9595 and sp_Q9H6H4_REEP4_HUMAN_9606 are exactly identical! WARNING: Sequences tr_B9PLF1_B9PLF1_TOXGV_432359 and tr_A0A074T4E9_A0A074T4E9_HAMHA_99158 are exactly identical! WARNING: Sequences tr_A0A2I3TJX4_A0A2I3TJX4_PANTR_9598 and tr_A0A2R8M477_A0A2R8M477_CALJA_9483 are exactly identical! WARNING: Sequences tr_G2HFX9_G2HFX9_PANTR_9598 and tr_A0A2R9BBT2_A0A2R9BBT2_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QRK6_H2QRK6_PANTR_9598 and tr_A0A2R9AKI9_A0A2R9AKI9_PANPA_9597 are exactly identical! WARNING: Sequences tr_K7CAY1_K7CAY1_PANTR_9598 and sp_Q6NUK4_REEP3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A0E0G0B3_A0A0E0G0B3_ORYNI_4536 and tr_B8AH15_B8AH15_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0G0B3_A0A0E0G0B3_ORYNI_4536 and tr_I1NWP6_I1NWP6_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0G0B3_A0A0E0G0B3_ORYNI_4536 and tr_A0A0E0N908_A0A0E0N908_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0G0B3_A0A0E0G0B3_ORYNI_4536 and tr_A0A0D3EZZ1_A0A0D3EZZ1_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0G0B3_A0A0E0G0B3_ORYNI_4536 and tr_A0A0D9YLH4_A0A0D9YLH4_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0GJR5_A0A0E0GJR5_ORYNI_4536 and tr_A0A0D3FG98_A0A0D3FG98_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0IV70_A0A0E0IV70_ORYNI_4536 and tr_Q7XGB3_Q7XGB3_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_H9FVE8_H9FVE8_MACMU_9544 and tr_A0A096MZY9_A0A096MZY9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H9FVE8_H9FVE8_MACMU_9544 and tr_A0A2K5N8U6_A0A2K5N8U6_CERAT_9531 are exactly identical! WARNING: Sequences tr_H9FVE8_H9FVE8_MACMU_9544 and tr_A0A2K6DU35_A0A2K6DU35_MACNE_9545 are exactly identical! WARNING: Sequences tr_A2XEL0_A2XEL0_ORYSI_39946 and tr_I1P9I4_I1P9I4_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A2XEL0_A2XEL0_ORYSI_39946 and tr_A0A0E0NSH8_A0A0E0NSH8_ORYRU_4529 are exactly identical! WARNING: Sequences tr_B8BDV3_B8BDV3_ORYSI_39946 and tr_I1QQQ3_I1QQQ3_ORYGL_4538 are exactly identical! WARNING: Sequences tr_F4PA41_F4PA41_BATDJ_684364 and tr_A0A177WWV0_A0A177WWV0_BATDE_403673 are exactly identical! WARNING: Sequences tr_F6ZYR3_F6ZYR3_CALJA_9483 and tr_A0A0D9R534_A0A0D9R534_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F2SJF7_F2SJF7_TRIRC_559305 and tr_A0A178EPR6_A0A178EPR6_TRIRU_5551 are exactly identical! WARNING: Sequences tr_F1MDM4_F1MDM4_BOVIN_9913 and sp_Q29RM3_REEP5_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M4DL86_M4DL86_BRARP_51351 and tr_A0A078I2C8_A0A078I2C8_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4DL86_M4DL86_BRARP_51351 and tr_A0A0D3C4H6_A0A0D3C4H6_BRAOL_109376 are exactly identical! WARNING: Sequences tr_M4EXV0_M4EXV0_BRARP_51351 and tr_A0A078GCG1_A0A078GCG1_BRANA_3708 are exactly identical! WARNING: Sequences tr_M8A6E8_M8A6E8_TRIUA_4572 and tr_A0A3B6HRE2_A0A3B6HRE2_WHEAT_4565 are exactly identical! WARNING: Sequences tr_A0A015J1C1_A0A015J1C1_9GLOM_1432141 and tr_A0A2H5T405_A0A2H5T405_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015KT33_A0A015KT33_9GLOM_1432141 and tr_A0A2I1FVA9_A0A2I1FVA9_9GLOM_588596 are exactly identical! WARNING: Sequences tr_A0A015KT33_A0A015KT33_9GLOM_1432141 and tr_A0A2H5SXL6_A0A2H5SXL6_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A044V472_A0A044V472_ONCVO_6282 and tr_A0A183H500_A0A183H500_9BILA_387005 are exactly identical! WARNING: Sequences tr_A0A044V472_A0A044V472_ONCVO_6282 and tr_A0A182E730_A0A182E730_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A067EJR8_A0A067EJR8_CITSI_2711 and tr_V4S7N8_V4S7N8_9ROSI_85681 are exactly identical! WARNING: Sequences tr_A0A067FWP9_A0A067FWP9_CITSI_2711 and tr_V4S775_V4S775_9ROSI_85681 are exactly identical! WARNING: Sequences tr_A0A2I3MJV5_A0A2I3MJV5_PAPAN_9555 and tr_A0A2K5MTH8_A0A2K5MTH8_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3NEW5_A0A2I3NEW5_PAPAN_9555 and tr_A0A2K5P0U9_A0A2K5P0U9_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3NEW5_A0A2I3NEW5_PAPAN_9555 and tr_A0A2K6E9S9_A0A2K6E9S9_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I3NEW5_A0A2I3NEW5_PAPAN_9555 and tr_A0A2K5ZYJ5_A0A2K5ZYJ5_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0D9RVH8_A0A0D9RVH8_CHLSB_60711 and tr_A0A2K5Z1Y8_A0A2K5Z1Y8_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A067D0L7_A0A067D0L7_SAPPC_695850 and tr_T0QUZ6_T0QUZ6_9STRA_1156394 are exactly identical! WARNING: Sequences tr_A0A022QZT4_A0A022QZT4_ERYGU_4155 and tr_A0A022R921_A0A022R921_ERYGU_4155 are exactly identical! WARNING: Sequences tr_A0A0W8CBA0_A0A0W8CBA0_PHYNI_4790 and tr_W2M6A0_W2M6A0_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A091IR46_A0A091IR46_EGRGA_188379 and tr_A0A091VMS9_A0A091VMS9_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091IR46_A0A091IR46_EGRGA_188379 and tr_A0A087QKJ6_A0A087QKJ6_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091IR46_A0A091IR46_EGRGA_188379 and tr_A0A0A0A9L2_A0A0A0A9L2_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A0L9V2K0_A0A0L9V2K0_PHAAN_3914 and tr_A0A1S3U931_A0A1S3U931_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A0L9V2K0_A0A0L9V2K0_PHAAN_3914 and tr_A0A3Q0F334_A0A3Q0F334_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A0V0RWL5_A0A0V0RWL5_9BILA_6336 and tr_A0A0V0WG93_A0A0V0WG93_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0RWL5_A0A0V0RWL5_9BILA_6336 and tr_A0A0V1LLJ1_A0A0V1LLJ1_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0RWL5_A0A0V0RWL5_9BILA_6336 and tr_A0A0V1NU01_A0A0V1NU01_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A1S4A883_A0A1S4A883_TOBAC_4097 and tr_A0A1U7VBQ7_A0A1U7VBQ7_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4BNI3_A0A1S4BNI3_TOBAC_4097 and tr_A0A1U7V684_A0A1U7V684_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4BYK1_A0A1S4BYK1_TOBAC_4097 and tr_A0A1U7WCA1_A0A1U7WCA1_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A2D0SAF4_A0A2D0SAF4_ICTPU_7998 and tr_A0A2D0SB80_A0A2D0SB80_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U3UZG8_A0A2U3UZG8_TURTR_9739 and tr_A0A2Y9PPA5_A0A2Y9PPA5_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U3UZG8_A0A2U3UZG8_TURTR_9739 and tr_A0A2Y9STR1_A0A2Y9STR1_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4BDV5_A0A2U4BDV5_TURTR_9739 and tr_A0A2Y9MGB8_A0A2Y9MGB8_DELLE_9749 are exactly identical! WARNING: Duplicate sequences found: 63 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/4_raxmlng_ancestral/Q9H902.raxml.reduced.phy Alignment comprises 1 partitions and 201 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 201 Gaps: 17.75 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/4_raxmlng_ancestral/Q9H902.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/3_mltree/Q9H902.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 51 / 4080 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -84454.361087 [00:00:00 -84454.361087] Initial branch length optimization [00:00:00 -83786.759563] Model parameter optimization (eps = 0.100000) [00:00:32] Tree #1, final logLikelihood: -83416.390214 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.141846,0.397680) (0.234605,0.543827) (0.389989,0.794783) (0.233560,2.166680) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/4_raxmlng_ancestral/Q9H902.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/4_raxmlng_ancestral/Q9H902.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/4_raxmlng_ancestral/Q9H902.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9H902/4_raxmlng_ancestral/Q9H902.raxml.log Analysis started: 12-Jul-2021 17:15:03 / finished: 12-Jul-2021 17:15:38 Elapsed time: 34.781 seconds Consumed energy: 2.442 Wh