RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 12-Jul-2021 16:39:30 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/2_msa/Q9C0K1_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/3_mltree/Q9C0K1.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626097170 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/2_msa/Q9C0K1_nogap_msa.fasta [00:00:00] Loaded alignment with 994 taxa and 460 sites WARNING: Sequences tr_A0A2R8Q6G1_A0A2R8Q6G1_DANRE_7955 and tr_F8W5D4_F8W5D4_DANRE_7955 are exactly identical! WARNING: Sequences tr_M3XPX1_M3XPX1_MUSPF_9669 and tr_A0A2Y9J0Q2_A0A2Y9J0Q2_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G1R2Y1_G1R2Y1_NOMLE_61853 and sp_Q5R9M9_S39A6_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_A0A2I2YX43_A0A2I2YX43_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_A0A2J8WVN7_A0A2J8WVN7_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_A0A2I3T5U1_A0A2I3T5U1_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and sp_Q9ULF5_S39AA_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_F6WDC7_F6WDC7_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_G7PL28_G7PL28_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_A0A096N0A4_A0A096N0A4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_A0A0D9RHV8_A0A0D9RHV8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_A0A2K5KJ54_A0A2K5KJ54_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1R502_G1R502_NOMLE_61853 and tr_A0A2K6CA44_A0A2K6CA44_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QK74_G3QK74_GORGO_9595 and tr_H2R2F5_H2R2F5_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QK74_G3QK74_GORGO_9595 and sp_Q9C0K1_S39A8_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2J8Y2U9_A0A2J8Y2U9_PONAB_9601 and sp_Q5RFD5_S39A7_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2J8Q1N0_A0A2J8Q1N0_PANTR_9598 and tr_A0A2R9CDT9_A0A2R9CDT9_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QEG0_H2QEG0_PANTR_9598 and tr_A0A2R9A211_A0A2R9A211_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A158NA85_A0A158NA85_ATTCE_12957 and tr_A0A195BKP4_A0A195BKP4_9HYME_520822 are exactly identical! WARNING: Sequences tr_F6ZQI3_F6ZQI3_MACMU_9544 and tr_A0A096MUA8_A0A096MUA8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6ZQI3_F6ZQI3_MACMU_9544 and tr_A0A0D9RZ98_A0A0D9RZ98_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F6ZQI3_F6ZQI3_MACMU_9544 and tr_A0A2K5MXG4_A0A2K5MXG4_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6ZQI3_F6ZQI3_MACMU_9544 and tr_A0A2K6CGA2_A0A2K6CGA2_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HA72_F7HA72_MACMU_9544 and tr_G7P2S2_G7P2S2_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7HKH5_F7HKH5_MACMU_9544 and tr_A0A0D9QVM1_A0A0D9QVM1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7HKH5_F7HKH5_MACMU_9544 and tr_A0A2K5N828_A0A2K5N828_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7HKH5_F7HKH5_MACMU_9544 and tr_A0A2K6B2Q1_A0A2K6B2Q1_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A0E0QK41_A0A0E0QK41_ORYRU_4529 and tr_A0A0E0AWE9_A0A0E0AWE9_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_D2H628_D2H628_AILME_9646 and tr_A0A384BSE7_A0A384BSE7_URSMA_29073 are exactly identical! WARNING: Sequences tr_W2PC75_W2PC75_PHYPN_761204 and tr_A0A0W8C150_A0A0W8C150_PHYNI_4790 are exactly identical! WARNING: Sequences tr_A0A096MPW9_A0A096MPW9_PAPAN_9555 and tr_A0A2K6AEP0_A0A2K6AEP0_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A096NHG1_A0A096NHG1_PAPAN_9555 and tr_A0A0D9RAY7_A0A0D9RAY7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096NHG1_A0A096NHG1_PAPAN_9555 and tr_A0A2K5L7X8_A0A2K5L7X8_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096NHG1_A0A096NHG1_PAPAN_9555 and tr_A0A2K6CE02_A0A2K6CE02_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A0A1NFM5_A0A0A1NFM5_9FUNG_58291 and tr_A0A367K5J3_A0A367K5J3_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A0V1D9B2_A0A0V1D9B2_TRIBR_45882 and tr_A0A0V0VX55_A0A0V0VX55_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1D9B2_A0A0V1D9B2_TRIBR_45882 and tr_A0A0V1PGR2_A0A0V1PGR2_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A2D0R477_A0A2D0R477_ICTPU_7998 and tr_A0A2D0R498_A0A2D0R498_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0R477_A0A2D0R477_ICTPU_7998 and tr_A0A2D0R5R9_A0A2D0R5R9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0R477_A0A2D0R477_ICTPU_7998 and tr_A0A2D0R5S9_A0A2D0R5S9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0R477_A0A2D0R477_ICTPU_7998 and tr_A0A2D0R6G6_A0A2D0R6G6_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U4BNL3_A0A2U4BNL3_TURTR_9739 and tr_A0A2Y9MVE1_A0A2Y9MVE1_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U3W879_A0A2U3W879_ODORO_9708 and tr_A0A2U3YDJ3_A0A2U3YDJ3_LEPWE_9713 are exactly identical! WARNING: Duplicate sequences found: 43 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1.raxml.reduced.phy Alignment comprises 1 partitions and 460 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 460 Gaps: 28.48 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/3_mltree/Q9C0K1.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 115 / 9200 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -275210.322568 [00:00:00 -275210.322568] Initial branch length optimization RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 17:20:20 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/2_msa/Q9C0K1_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/3_mltree/Q9C0K1.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626099620 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF WARNING: The model you specified on the command line (LG4X) will be ignored since the binary MSA file already contains a model definition. If you want to change the model, please re-run RAxML-NG with the original PHYLIP/FASTA alignment and --redo option. [00:00:00] Loading binary alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1.raxml.rba [00:00:00] Alignment comprises 994 taxa, 1 partitions and 460 patterns Partition 0: noname Model: LG4X+R4 Alignment sites: 460 Gaps: 28.48 % Invariant sites: 0.00 % Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] NOTE: Resuming execution from checkpoint (logLH: -275210.32, ML trees: 0, bootstraps: 0) [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 115 / 9200 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -275210.322568 [00:00:00 -275210.322568] Initial branch length optimization [00:00:03 -204898.086445] Model parameter optimization (eps = 0.100000) [00:00:57] Tree #1, final logLikelihood: -204011.785102 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.180398,0.311780) (0.219234,0.437367) (0.292291,0.852627) (0.308076,1.943201) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0K1/4_raxmlng_ancestral/Q9C0K1.raxml.log Analysis started: 12-Jul-2021 17:20:20 / finished: 12-Jul-2021 17:21:22 Elapsed time: 62.147 seconds (this run) / 62.503 seconds (total with restarts) Consumed energy: 5.137 Wh