RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 04-Jul-2021 03:09:04 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/2_msa/Q9C0A1_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1 --seed 2 --threads 1 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), NONE/sequential [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/2_msa/Q9C0A1_trimmed_msa.fasta [00:00:00] Loaded alignment with 925 taxa and 56 sites WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and sp_Q8IRC7_AWH_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_B4IZW5_B4IZW5_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_B4HTV0_B4HTV0_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_Q2M074_Q2M074_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_B4N593_B4N593_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_B3M802_B3M802_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_B4GS09_B4GS09_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_B4LDG3_B4LDG3_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_B4KY96_B4KY96_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_A0A0L0CKE9_A0A0L0CKE9_LUCCU_7375 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_A0A0M4EFP8_A0A0M4EFP8_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4QPZ4_B4QPZ4_DROSI_7240 and tr_A0A1W4W4V9_A0A1W4W4V9_DROFC_30025 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and sp_P28167_ZFH2_DROME_7227 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_B4JZV9_B4JZV9_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_B4IIW8_B4IIW8_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_A0A0R3NWL5_A0A0R3NWL5_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_B4NHL7_B4NHL7_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_B3N043_B3N043_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_B4H879_B4H879_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_B4MF05_B4MF05_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_D0Z7A7_D0Z7A7_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_B4L7B9_B4L7B9_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_A0A0L0CLE6_A0A0L0CLE6_LUCCU_7375 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_A0A0M4EHH4_A0A0M4EHH4_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_A0A1J1J843_A0A1J1J843_9DIPT_568069 are exactly identical! WARNING: Sequences tr_B4R2F6_B4R2F6_DROSI_7240 and tr_A0A1W4VID6_A0A1W4VID6_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9FTE1_E9FTE1_DAPPU_6669 and tr_E2C4W9_E2C4W9_HARSA_610380 are exactly identical! WARNING: Sequences tr_E9FTE1_E9FTE1_DAPPU_6669 and tr_E0VGR2_E0VGR2_PEDHC_121224 are exactly identical! WARNING: Sequences tr_E9FTE1_E9FTE1_DAPPU_6669 and tr_A0A164LXK1_A0A164LXK1_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E9FTE1_E9FTE1_DAPPU_6669 and tr_A0A1D2NDK1_A0A1D2NDK1_ORCCI_48709 are exactly identical! WARNING: Sequences tr_E9FTE1_E9FTE1_DAPPU_6669 and tr_A0A2P8Y7T1_A0A2P8Y7T1_BLAGE_6973 are exactly identical! WARNING: Sequences tr_E9FUD2_E9FUD2_DAPPU_6669 and tr_A0A164V0U0_A0A164V0U0_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_K7JBA0_K7JBA0_NASVI_7425 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A088ANJ3_A0A088ANJ3_APIME_7460 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A088ANR1_A0A088ANR1_APIME_7460 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A158N8Y3_A0A158N8Y3_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_E2C3W4_E2C3W4_HARSA_610380 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A0N0BI47_A0A0N0BI47_9HYME_166423 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A0L7QTH7_A0A0L7QTH7_9HYME_597456 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A154PLR6_A0A154PLR6_9HYME_178035 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A151ISL0_A0A151ISL0_9HYME_471704 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A151HZ06_A0A151HZ06_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A195F4T2_A0A195F4T2_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A2A3EG70_A0A2A3EG70_APICC_94128 are exactly identical! WARNING: Sequences tr_E2A9E4_E2A9E4_CAMFO_104421 and tr_A0A2A3EH35_A0A2A3EH35_APICC_94128 are exactly identical! WARNING: Sequences tr_E2A9E5_E2A9E5_CAMFO_104421 and tr_A0A158N8Y2_A0A158N8Y2_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2A9E5_E2A9E5_CAMFO_104421 and tr_A0A151WNC5_A0A151WNC5_9HYME_64791 are exactly identical! WARNING: Sequences tr_E2A9E5_E2A9E5_CAMFO_104421 and tr_A0A151ISE0_A0A151ISE0_9HYME_471704 are exactly identical! WARNING: Sequences tr_E2A9E5_E2A9E5_CAMFO_104421 and tr_A0A151HZ30_A0A151HZ30_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2A9E5_E2A9E5_CAMFO_104421 and tr_A0A195F5E9_A0A195F5E9_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2A9E5_E2A9E5_CAMFO_104421 and tr_A0A195C9I6_A0A195C9I6_9HYME_456900 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_K7K088_K7K088_NASVI_7425 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A088AQV4_A0A088AQV4_APIME_7460 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_H9JR61_H9JR61_BOMMO_7091 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A158P3C6_A0A158P3C6_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A212F709_A0A212F709_DANPL_278856 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_F4X4Y9_F4X4Y9_ACREC_103372 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A0L7LVT6_A0A0L7LVT6_9NEOP_104452 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A026WFZ9_A0A026WFZ9_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A0M8ZQG9_A0A0M8ZQG9_9HYME_166423 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A194R437_A0A194R437_PAPMA_76193 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A151XHH2_A0A151XHH2_9HYME_64791 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A154PPP8_A0A154PPP8_9HYME_178035 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A151J1Y2_A0A151J1Y2_9HYME_471704 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A195BPR0_A0A195BPR0_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A195EZ58_A0A195EZ58_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A195CWK8_A0A195CWK8_9HYME_456900 are exactly identical! WARNING: Sequences tr_E2B1R5_E2B1R5_CAMFO_104421 and tr_A0A2A4JQ20_A0A2A4JQ20_HELVI_7102 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F1N9R6_F1N9R6_CHICK_9031 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and sp_Q61329_ZFHX3_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_M3Y8N4_M3Y8N4_MUSPF_9669 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2I3GL83_A0A2I3GL83_NOMLE_61853 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G1PTV6_G1PTV6_MYOLU_59463 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G3I281_G3I281_CRIGR_10029 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G3R8S5_G3R8S5_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_H2NRD3_H2NRD3_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G1N9D6_G1N9D6_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_H9GDM8_H9GDM8_ANOCA_28377 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G1TEQ5_G1TEQ5_RABIT_9986 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_E2RBC5_E2RBC5_CANLF_9615 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2J8K9T3_A0A2J8K9T3_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F7C7Y5_F7C7Y5_ORNAN_9258 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F7G4V9_F7G4V9_MONDO_13616 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F6UVC9_F6UVC9_HORSE_9796 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_W5P0H0_W5P0H0_SHEEP_9940 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F1M4Q6_F1M4Q6_RAT_10116 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A3B5PSG9_A0A3B5PSG9_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_I3NFJ9_I3NFJ9_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_H0X3M8_H0X3M8_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A286Y2S6_A0A286Y2S6_CAVPO_10141 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and sp_Q15911_ZFHX3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F7HG12_F7HG12_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G5AZT2_G5AZT2_HETGA_10181 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_K7FA83_K7FA83_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G3TIZ5_G3TIZ5_LOXAF_9785 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G3WNB8_G3WNB8_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_H0ZCX7_H0ZCX7_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F6Y4J1_F6Y4J1_XENTR_8364 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2R8P5Z3_A0A2R8P5Z3_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_F1S397_F1S397_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_H3B5A3_H3B5A3_LATCH_7897 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_G1L5Y8_G1L5Y8_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_E1BPV9_E1BPV9_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_L5KUC2_L5KUC2_PTEAL_9402 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_M3X9I5_M3X9I5_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_U3JJ68_U3JJ68_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_U3I3I7_U3I3I7_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_W5M9H1_W5M9H1_LEPOC_7918 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A096MWU7_A0A096MWU7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A091DB35_A0A091DB35_FUKDA_885580 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A0D9QVZ0_A0A0D9QVZ0_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A151NNZ8_A0A151NNZ8_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A0Q3MBY6_A0A0Q3MBY6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A091UQS7_A0A091UQS7_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A091WCN6_A0A091WCN6_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A099ZAC4_A0A099ZAC4_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A091HKI0_A0A091HKI0_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A1S3WDU8_A0A1S3WDU8_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A1S3EUP1_A0A1S3EUP1_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A1L8GKV0_A0A1L8GKV0_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A1U7TCA7_A0A1U7TCA7_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A3Q0FQQ8_A0A3Q0FQQ8_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A3Q0CPV7_A0A3Q0CPV7_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A1V4K1S3_A0A1V4K1S3_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A218USJ3_A0A218USJ3_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A226NC70_A0A226NC70_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A226PE88_A0A226PE88_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2K5L3T0_A0A2K5L3T0_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2K6BJP4_A0A2K6BJP4_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2K6AA60_A0A2K6AA60_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2R9B026_A0A2R9B026_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2U3VF68_A0A2U3VF68_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2U3XSE3_A0A2U3XSE3_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2Y9RIC6_A0A2Y9RIC6_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2Y9KD98_A0A2Y9KD98_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2Y9P9G9_A0A2Y9P9G9_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A2Y9SXU1_A0A2Y9SXU1_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A384D162_A0A384D162_URSMA_29073 are exactly identical! WARNING: Sequences tr_A0A0R4ISP1_A0A0R4ISP1_DANRE_7955 and tr_A0A384BGG8_A0A384BGG8_BALAS_310752 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_F1P4G9_F1P4G9_CHICK_9031 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and sp_O35652_LHX8_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_M3YHR7_M3YHR7_MUSPF_9669 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2I3GL84_A0A2I3GL84_NOMLE_61853 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G1NWA8_G1NWA8_MYOLU_59463 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G3SJ98_G3SJ98_GORGO_9595 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_H2N712_H2N712_PONAB_9601 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_H9GHG9_H9GHG9_ANOCA_28377 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G1U4X0_G1U4X0_RABIT_9986 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_E2REU0_E2REU0_CANLF_9615 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2I3S5M9_A0A2I3S5M9_PANTR_9598 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_F6S4Y5_F6S4Y5_ORNAN_9258 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_F7AWG1_F7AWG1_HORSE_9796 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_W5PSR0_W5PSR0_SHEEP_9940 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G3V6V6_G3V6V6_RAT_10116 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_I3MTD2_I3MTD2_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_H0XJ18_H0XJ18_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_H0UUZ3_H0UUZ3_CAVPO_10141 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and sp_Q68G74_LHX8_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_F7BBF9_F7BBF9_MACMU_9544 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G5AQ88_G5AQ88_HETGA_10181 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_K7FML9_K7FML9_PELSI_13735 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G3TEC8_G3TEC8_LOXAF_9785 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G3VKL3_G3VKL3_SARHA_9305 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_H0ZJH3_H0ZJH3_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2R8M3J0_A0A2R8M3J0_CALJA_9483 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A288CFZ4_A0A288CFZ4_PIG_9823 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_H3AVJ4_H3AVJ4_LATCH_7897 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G1L9U3_G1L9U3_AILME_9646 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_G7NX03_G7NX03_MACFA_9541 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_M3XDY0_M3XDY0_FELCA_9685 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_U3JEK9_U3JEK9_FICAL_59894 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_U3IZ36_U3IZ36_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_W5KKA4_W5KKA4_ASTMX_7994 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_W5M6T0_W5M6T0_LEPOC_7918 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2I3LDJ2_A0A2I3LDJ2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A0D9S6Z1_A0A0D9S6Z1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A0P7UZV8_A0A0P7UZV8_9TELE_113540 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A151NJ78_A0A151NJ78_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A0Q3MKY5_A0A0Q3MKY5_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A091E6R9_A0A091E6R9_CORBR_85066 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A093S8Y4_A0A093S8Y4_9PASS_328815 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A091UU84_A0A091UU84_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A087RDS5_A0A087RDS5_APTFO_9233 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A093KAU4_A0A093KAU4_STRCA_441894 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A091WNC9_A0A091WNC9_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A099Z814_A0A099Z814_TINGU_94827 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A091G9S7_A0A091G9S7_9AVES_55661 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A0A0AEQ5_A0A0A0AEQ5_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2I0MCG9_A0A2I0MCG9_COLLI_8932 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A093HAU2_A0A093HAU2_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A1S3WHS2_A0A1S3WHS2_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A1S3GTP4_A0A1S3GTP4_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A1S3LWC0_A0A1S3LWC0_SALSA_8030 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A1U7UI90_A0A1U7UI90_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A1U7RDP7_A0A1U7RDP7_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A1U7RB84_A0A1U7RB84_MESAU_10036 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A1V4JZ37_A0A1V4JZ37_PATFA_372326 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A060YFF3_A0A060YFF3_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A218UE73_A0A218UE73_9PASE_299123 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A226PQ37_A0A226PQ37_COLVI_9014 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2D0T9K7_A0A2D0T9K7_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_W5UDX0_W5UDX0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2K5MVV3_A0A2K5MVV3_CERAT_9531 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2K6AYA2_A0A2K6AYA2_MACNE_9545 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2K5YN24_A0A2K5YN24_MANLE_9568 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2R9BAU6_A0A2R9BAU6_PANPA_9597 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2U4A1B0_A0A2U4A1B0_TURTR_9739 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2U3ZS73_A0A2U3ZS73_ODORO_9708 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2U3XQF1_A0A2U3XQF1_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2Y9D752_A0A2Y9D752_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2Y9IVM1_A0A2Y9IVM1_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2Y9NUF7_A0A2Y9NUF7_DELLE_9749 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A2Y9F546_A0A2Y9F546_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A384C241_A0A384C241_URSMA_29073 are exactly identical! WARNING: Sequences tr_A5PMV8_A5PMV8_DANRE_7955 and tr_A0A384A6X9_A0A384A6X9_BALAS_310752 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A1D5P0W7_A0A1D5P0W7_CHICK_9031 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and sp_O73590_ZFHX4_CHICK_9031 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and sp_Q9JJN2_ZFHX4_MOUSE_10090 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_M3YFA9_M3YFA9_MUSPF_9669 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_H2LRK5_H2LRK5_ORYLA_8090 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G1QN68_G1QN68_NOMLE_61853 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G1PVV8_G1PVV8_MYOLU_59463 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G3S4D6_G3S4D6_GORGO_9595 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_H2PQL8_H2PQL8_PONAB_9601 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G1NGE0_G1NGE0_MELGA_9103 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G1SG02_G1SG02_RABIT_9986 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_E2R4S1_E2R4S1_CANLF_9615 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_H2QZV3_H2QZV3_PANTR_9598 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_F7BTH3_F7BTH3_MONDO_13616 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_F6ZE06_F6ZE06_HORSE_9796 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_W5PBS2_W5PBS2_SHEEP_9940 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_D4A3U5_D4A3U5_RAT_10116 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A3B5R460_A0A3B5R460_XIPMA_8083 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_I3KAT9_I3KAT9_ORENI_8128 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_H0WGI5_H0WGI5_OTOGA_30611 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_H0VM05_H0VM05_CAVPO_10141 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and sp_Q86UP3_ZFHX4_HUMAN_9606 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_F6RGC8_F6RGC8_MACMU_9544 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G5BUW1_G5BUW1_HETGA_10181 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_K7F7H8_K7F7H8_PELSI_13735 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G3TD58_G3TD58_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G3WL81_G3WL81_SARHA_9305 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_H0ZMY8_H0ZMY8_TAEGU_59729 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_F6SCB2_F6SCB2_CALJA_9483 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_F1RWK5_F1RWK5_PIG_9823 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_H3ATQ0_H3ATQ0_LATCH_7897 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G1MCM8_G1MCM8_AILME_9646 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_G7PC24_G7PC24_MACFA_9541 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_F1MPW8_F1MPW8_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_L5JSN4_L5JSN4_PTEAL_9402 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2I2ULM2_A0A2I2ULM2_FELCA_9685 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_U3K1P8_U3K1P8_FICAL_59894 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_U3IZL9_U3IZL9_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_W5N7K1_W5N7K1_LEPOC_7918 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A087XU64_A0A087XU64_POEFO_48698 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A096N7P0_A0A096N7P0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A091CSG0_A0A091CSG0_FUKDA_885580 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A0D9RLY4_A0A0D9RLY4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A0P7Z654_A0A0P7Z654_9TELE_113540 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A151MNA7_A0A151MNA7_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A0Q3URJ2_A0A0Q3URJ2_AMAAE_12930 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A091F0L6_A0A091F0L6_CORBR_85066 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A091IY40_A0A091IY40_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A093PSZ9_A0A093PSZ9_9PASS_328815 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A091VMT1_A0A091VMT1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A087QPD1_A0A087QPD1_APTFO_9233 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A099ZQR4_A0A099ZQR4_TINGU_94827 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2I0MVT9_A0A2I0MVT9_COLLI_8932 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A093GCQ3_A0A093GCQ3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A1S2ZWY0_A0A1S2ZWY0_ERIEU_9365 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A1S3G4Z7_A0A1S3G4Z7_DIPOR_10020 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A1U7UCN8_A0A1U7UCN8_TARSY_1868482 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A3Q0G894_A0A3Q0G894_ALLSI_38654 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A1U8BT19_A0A1U8BT19_MESAU_10036 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A1V4KGL8_A0A1V4KGL8_PATFA_372326 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2I4B7Z0_A0A2I4B7Z0_9TELE_52670 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A218V317_A0A218V317_9PASE_299123 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A226NMT6_A0A226NMT6_CALSU_9009 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A226P491_A0A226P491_COLVI_9014 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2K5M563_A0A2K5M563_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2K6DP22_A0A2K6DP22_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2K5ZP70_A0A2K5ZP70_MANLE_9568 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2R9A485_A0A2R9A485_PANPA_9597 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2U4AIJ9_A0A2U4AIJ9_TURTR_9739 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2U3WE66_A0A2U3WE66_ODORO_9708 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2U3X7M8_A0A2U3X7M8_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2U9D1V2_A0A2U9D1V2_SCOMX_52904 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2Y9QJ85_A0A2Y9QJ85_TRIMA_127582 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2Y9KQS0_A0A2Y9KQS0_ENHLU_391180 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2Y9PZL6_A0A2Y9PZL6_DELLE_9749 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A2Y9SVR0_A0A2Y9SVR0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A384BZ03_A0A384BZ03_URSMA_29073 are exactly identical! WARNING: Sequences tr_F6NXU9_F6NXU9_DANRE_7955 and tr_A0A384ACR1_A0A384ACR1_BALAS_310752 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_F1NLU0_F1NLU0_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and sp_Q9R1R0_LHX6_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_M3Y788_M3Y788_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_G3IBT6_G3IBT6_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_K7ESZ3_K7ESZ3_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_G3URD2_G3URD2_MELGA_9103 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_H9GJR1_H9GJR1_ANOCA_28377 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_E2RA99_E2RA99_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2I3T722_A0A2I3T722_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_F7E3R1_F7E3R1_ORNAN_9258 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_F6TTC0_F6TTC0_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_D3ZDG6_D3ZDG6_RAT_10116 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A287D4L8_A0A287D4L8_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_H0XCJ6_H0XCJ6_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_H0VHF2_H0VHF2_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and sp_Q9UPM6_LHX6_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A1D5QBK8_A0A1D5QBK8_MACMU_9544 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_G3T8U9_G3T8U9_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_G3WEX5_G3WEX5_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_H0Z8T3_H0Z8T3_TAEGU_59729 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_F6PRL0_F6PRL0_XENTR_8364 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_F1SLQ9_F1SLQ9_PIG_9823 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_H3ALF7_H3ALF7_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_G1L1S7_G1L1S7_AILME_9646 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_E1B8I6_E1B8I6_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_L5K9I1_L5K9I1_PTEAL_9402 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A337SS04_A0A337SS04_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_U3JGV9_U3JGV9_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_W5M563_W5M563_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A0D9RLL9_A0A0D9RLL9_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A0P7U9L4_A0A0P7U9L4_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A151MG29_A0A151MG29_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A0Q3X2W4_A0A0Q3X2W4_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A091F5U5_A0A091F5U5_CORBR_85066 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A093SG74_A0A093SG74_9PASS_328815 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A093H308_A0A093H308_DRYPU_118200 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A1S3ASK7_A0A1S3ASK7_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A1S3GBD3_A0A1S3GBD3_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A1S3KSX2_A0A1S3KSX2_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A3Q0DSY1_A0A3Q0DSY1_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A3Q0FVU3_A0A3Q0FVU3_ALLSI_38654 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A1U7QML6_A0A1U7QML6_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A1V4J6F4_A0A1V4J6F4_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A218V619_A0A218V619_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A226NIL5_A0A226NIL5_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2D0SPS2_A0A2D0SPS2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2D0SPS6_A0A2D0SPS6_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2D0SPT3_A0A2D0SPT3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2D0SQY8_A0A2D0SQY8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2K5LGD0_A0A2K5LGD0_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2K6E8R5_A0A2K6E8R5_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2K5Z9W7_A0A2K5Z9W7_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2R9B8D4_A0A2R9B8D4_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2U4CHH0_A0A2U4CHH0_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2U3WR43_A0A2U3WR43_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2U3YTS2_A0A2U3YTS2_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2Y9DJ71_A0A2Y9DJ71_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2Y9JHE7_A0A2Y9JHE7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2Y9NTG7_A0A2Y9NTG7_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A2Y9SU71_A0A2Y9SU71_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q6BDC4_Q6BDC4_DANRE_7955 and tr_A0A383ZSS1_A0A383ZSS1_BALAS_310752 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and sp_Q9WUH2_LHX9_MOUSE_10090 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and sp_Q9Z0S2_LHX2_MOUSE_10090 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_M3YG74_M3YG74_MUSPF_9669 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_M3YRH7_M3YRH7_MUSPF_9669 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H2LXY5_H2LXY5_ORYLA_8090 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2I3G0N3_A0A2I3G0N3_NOMLE_61853 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2I3G8Y4_A0A2I3G8Y4_NOMLE_61853 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G1NSI1_G1NSI1_MYOLU_59463 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G1PVP0_G1PVP0_MYOLU_59463 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3I8N8_G3I8N8_CRIGR_10029 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2I2Z1J5_A0A2I2Z1J5_GORGO_9595 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3QZH4_G3QZH4_GORGO_9595 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H2N4A3_H2N4A3_PONAB_9601 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H2PTC4_H2PTC4_PONAB_9601 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H9GL92_H9GL92_ANOCA_28377 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H9GLN8_H9GLN8_ANOCA_28377 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G1TWG7_G1TWG7_RABIT_9986 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_E2R2S5_E2R2S5_CANLF_9615 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_E2RPC3_E2RPC3_CANLF_9615 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2I3SPX4_A0A2I3SPX4_PANTR_9598 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H2QXV2_H2QXV2_PANTR_9598 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_F6X3T3_F6X3T3_MONDO_13616 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_F6WGG4_F6WGG4_HORSE_9796 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_F6XAU7_F6XAU7_HORSE_9796 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_W5PWA0_W5PWA0_SHEEP_9940 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_W5Q1H3_W5Q1H3_SHEEP_9940 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and sp_P36198_LHX2_RAT_10116 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and sp_Q80W90_LHX9_RAT_10116 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A3B5PWN6_A0A3B5PWN6_XIPMA_8083 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_I3K9H4_I3K9H4_ORENI_8128 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_I3LXC7_I3LXC7_ICTTR_43179 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H0WMW9_H0WMW9_OTOGA_30611 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H0WP78_H0WP78_OTOGA_30611 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H2RQG9_H2RQG9_TAKRU_31033 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H0W233_H0W233_CAVPO_10141 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and sp_P50458_LHX2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and sp_Q9NQ69_LHX9_HUMAN_9606 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1D5QN93_A0A1D5QN93_MACMU_9544 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_F6TBF3_F6TBF3_MACMU_9544 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G5BP35_G5BP35_HETGA_10181 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_K7FKH8_K7FKH8_PELSI_13735 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3NYQ1_G3NYQ1_GASAC_69293 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3SZP8_G3SZP8_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3T0Q1_G3T0Q1_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3WGF5_G3WGF5_SARHA_9305 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3WQE4_G3WQE4_SARHA_9305 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_H0Z1Q2_H0Z1Q2_TAEGU_59729 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2R8MB93_A0A2R8MB93_CALJA_9483 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_U3C3V9_U3C3V9_CALJA_9483 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A287AJK3_A0A287AJK3_PIG_9823 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_C4TJC6_C4TJC6_PIG_9823 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_D2HBP1_D2HBP1_AILME_9646 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G1LX79_G1LX79_AILME_9646 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G7NWH8_G7NWH8_MACFA_9541 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G7PRH0_G7PRH0_MACFA_9541 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and sp_A0JNI8_LHX9_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_G3N0G6_G3N0G6_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_L5K735_L5K735_PTEAL_9402 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_L5L7S8_L5L7S8_PTEAL_9402 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_M3VXC0_M3VXC0_FELCA_9685 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_M3W6P1_M3W6P1_FELCA_9685 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_U3JJD3_U3JJD3_FICAL_59894 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_U3IL82_U3IL82_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A3B1J050_A0A3B1J050_ASTMX_7994 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A087XXY7_A0A087XXY7_POEFO_48698 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A096P0M4_A0A096P0M4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2I3LDS6_A0A2I3LDS6_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A091D9C0_A0A091D9C0_FUKDA_885580 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A091E0K8_A0A091E0K8_FUKDA_885580 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A0D9RM45_A0A0D9RM45_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A151NDD2_A0A151NDD2_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2I0MDP3_A0A2I0MDP3_COLLI_8932 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1S3ASB0_A0A1S3ASB0_ERIEU_9365 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1S3ASM9_A0A1S3ASM9_ERIEU_9365 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1S3F854_A0A1S3F854_DIPOR_10020 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1S3FL91_A0A1S3FL91_DIPOR_10020 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1U7S4R9_A0A1U7S4R9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1U7QYZ9_A0A1U7QYZ9_MESAU_10036 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1U8BVL0_A0A1U8BVL0_MESAU_10036 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A1V4JYC0_A0A1V4JYC0_PATFA_372326 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2I4B4V5_A0A2I4B4V5_9TELE_52670 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2D0RQQ9_A0A2D0RQQ9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2D0RRP8_A0A2D0RRP8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2K5KYM0_A0A2K5KYM0_CERAT_9531 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2K5LNZ1_A0A2K5LNZ1_CERAT_9531 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2K6D2V7_A0A2K6D2V7_MACNE_9545 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2K6E6I1_A0A2K6E6I1_MACNE_9545 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2K6A320_A0A2K6A320_MANLE_9568 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2R8Z7U1_A0A2R8Z7U1_PANPA_9597 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2R9AZ03_A0A2R9AZ03_PANPA_9597 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2U4A4I7_A0A2U4A4I7_TURTR_9739 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2U3X0L6_A0A2U3X0L6_ODORO_9708 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2U3Z017_A0A2U3Z017_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2U9C274_A0A2U9C274_SCOMX_52904 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2Y9DJ84_A0A2Y9DJ84_TRIMA_127582 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2Y9J983_A0A2Y9J983_ENHLU_391180 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2Y9JU98_A0A2Y9JU98_ENHLU_391180 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2Y9NUI6_A0A2Y9NUI6_DELLE_9749 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2Y9NXS8_A0A2Y9NXS8_DELLE_9749 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2Y9F6U9_A0A2Y9F6U9_PHYCD_9755 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A2Y9SU80_A0A2Y9SU80_PHYCD_9755 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A384BL21_A0A384BL21_URSMA_29073 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A383YXB7_A0A383YXB7_BALAS_310752 are exactly identical! WARNING: Sequences tr_F1NV70_F1NV70_CHICK_9031 and tr_A0A384BG94_A0A384BG94_BALAS_310752 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_M3YR06_M3YR06_MUSPF_9669 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_G3IP57_G3IP57_CRIGR_10029 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_H2PTF0_H2PTF0_PONAB_9601 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_J9NU69_J9NU69_CANLF_9615 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_H2QXW6_H2QXW6_PANTR_9598 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_G3V877_G3V877_RAT_10116 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_I3NEG6_I3NEG6_ICTTR_43179 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_H0WI04_H0WI04_OTOGA_30611 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_H0VYV0_H0VYV0_CAVPO_10141 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and sp_O60663_LMX1B_HUMAN_9606 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_F6VZX1_F6VZX1_MACMU_9544 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_G3TF87_G3TF87_LOXAF_9785 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2R8PA11_A0A2R8PA11_CALJA_9483 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A286ZUN2_A0A286ZUN2_PIG_9823 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_D2H3X4_D2H3X4_AILME_9646 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_G8F4I6_G8F4I6_MACFA_9541 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_F1N4F7_F1N4F7_BOVIN_9913 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2I2V362_A0A2I2V362_FELCA_9685 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A091CL47_A0A091CL47_FUKDA_885580 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A0D9RMI6_A0A0D9RMI6_CHLSB_60711 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A1S3FJM1_A0A1S3FJM1_DIPOR_10020 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A3Q0DQZ1_A0A3Q0DQZ1_TARSY_1868482 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2K6C4K9_A0A2K6C4K9_MACNE_9545 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2K5XR69_A0A2K5XR69_MANLE_9568 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2R9C8I8_A0A2R9C8I8_PANPA_9597 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2U4CH26_A0A2U4CH26_TURTR_9739 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2U3VDE4_A0A2U3VDE4_ODORO_9708 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2U3Z6A8_A0A2U3Z6A8_LEPWE_9713 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2Y9DJF2_A0A2Y9DJF2_TRIMA_127582 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2Y9JD51_A0A2Y9JD51_ENHLU_391180 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2Y9NL89_A0A2Y9NL89_DELLE_9749 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A2Y9T224_A0A2Y9T224_PHYCD_9755 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A384CQM6_A0A384CQM6_URSMA_29073 are exactly identical! WARNING: Sequences sp_O88609_LMX1B_MOUSE_10090 and tr_A0A384B518_A0A384B518_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_M3Y4W0_M3Y4W0_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2I3GB45_A0A2I3GB45_NOMLE_61853 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_G1PWE7_G1PWE7_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_G3QQN8_G3QQN8_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_H2NKT4_H2NKT4_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_F1PF36_F1PF36_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_H2R9F0_H2R9F0_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_F6ZYQ6_F6ZYQ6_HORSE_9796 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_D3ZF41_D3ZF41_RAT_10116 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_I3M0U6_I3M0U6_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_H0XY72_H0XY72_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and sp_Q9C0A1_ZFHX2_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_F7G0J9_F7G0J9_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_G5ASM1_G5ASM1_HETGA_10181 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_G3TM75_G3TM75_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_F6VBJ3_F6VBJ3_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A286ZJ69_A0A286ZJ69_PIG_9823 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_G1ME10_G1ME10_AILME_9646 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_E1BD77_E1BD77_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_L5KKD1_L5KKD1_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A096NX36_A0A096NX36_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A091DB49_A0A091DB49_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A0D9RTT2_A0A0D9RTT2_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A1S3AKJ1_A0A1S3AKJ1_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A1S3FW55_A0A1S3FW55_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A1U7UJE1_A0A1U7UJE1_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2K5M709_A0A2K5M709_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2K6D7C8_A0A2K6D7C8_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2K5Y0F7_A0A2K5Y0F7_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2R9BVA3_A0A2R9BVA3_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2U3W2F1_A0A2U3W2F1_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2U3Y4Q1_A0A2U3Y4Q1_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2Y9IIS9_A0A2Y9IIS9_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A2Y9LI28_A0A2Y9LI28_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A384DPT6_A0A384DPT6_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q2MHN3_ZFHX2_MOUSE_10090 and tr_A0A383ZZV4_A0A383ZZV4_BALAS_310752 are exactly identical! WARNING: Sequences tr_W5JFD9_W5JFD9_ANODA_43151 and tr_B0WHE9_B0WHE9_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JFD9_W5JFD9_ANODA_43151 and tr_A7USJ8_A7USJ8_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JFD9_W5JFD9_ANODA_43151 and tr_Q17IK3_Q17IK3_AEDAE_7159 are exactly identical! WARNING: Sequences tr_W5JFD9_W5JFD9_ANODA_43151 and tr_A0A084WPS8_A0A084WPS8_ANOSI_74873 are exactly identical! WARNING: Sequences tr_W5JIB2_W5JIB2_ANODA_43151 and tr_B0W839_B0W839_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JIB2_W5JIB2_ANODA_43151 and tr_Q7Q5A5_Q7Q5A5_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JIB2_W5JIB2_ANODA_43151 and tr_Q16JZ5_Q16JZ5_AEDAE_7159 are exactly identical! WARNING: Sequences tr_W5JIB2_W5JIB2_ANODA_43151 and tr_A0A084WMN3_A0A084WMN3_ANOSI_74873 are exactly identical! WARNING: Sequences tr_W5JV75_W5JV75_ANODA_43151 and tr_B0W841_B0W841_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JV75_W5JV75_ANODA_43151 and tr_Q16I82_Q16I82_AEDAE_7159 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_B4JNT7_B4JNT7_DROGR_7222 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_Q29GR9_Q29GR9_DROPS_46245 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_B4NPZ4_B4NPZ4_DROWI_7260 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_B3MZH3_B3MZH3_DROAN_7217 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_B4MD89_B4MD89_DROVI_7244 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_B4L3K6_B4L3K6_DROMO_7230 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_A0A0L0C2K4_A0A0L0C2K4_LUCCU_7375 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_A0A0M3QZL8_A0A0M3QZL8_DROBS_30019 are exactly identical! WARNING: Sequences tr_Q9V472_Q9V472_DROME_7227 and tr_A0A1W4UQM5_A0A1W4UQM5_DROFC_30025 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_I3JF02_I3JF02_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_H2V7C2_H2V7C2_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_H3CVC8_H3CVC8_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_W5KA47_W5KA47_ASTMX_7994 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A087X7C4_A0A087X7C4_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A0P7TM69_A0A0P7TM69_9TELE_113540 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A1S3KTU3_A0A1S3KTU3_SALSA_8030 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A2I4CZD6_A0A2I4CZD6_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A060WAW2_A0A060WAW2_ONCMY_8022 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A060XR79_A0A060XR79_ONCMY_8022 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A2D0RSN9_A0A2D0RSN9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A2D0RSP3_A0A2D0RSP3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_H2LUT7_H2LUT7_ORYLA_8090 and tr_A0A2U9BCF3_A0A2U9BCF3_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_M3ZMW8_M3ZMW8_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_I3J739_I3J739_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_H2RQ48_H2RQ48_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_H3C4V4_H3C4V4_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_G3PZ75_G3PZ75_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_A0A087YP80_A0A087YP80_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_A0A2I4AUY5_A0A2I4AUY5_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2M247_H2M247_ORYLA_8090 and tr_A0A2U9CHD8_A0A2U9CHD8_SCOMX_52904 are exactly identical! WARNING: Sequences tr_B7PJQ2_B7PJQ2_IXOSC_6945 and tr_A0A087U4P8_A0A087U4P8_9ARAC_407821 are exactly identical! WARNING: Sequences tr_B7Q789_B7Q789_IXOSC_6945 and tr_A0A087SV62_A0A087SV62_9ARAC_407821 are exactly identical! WARNING: Sequences tr_B7Q789_B7Q789_IXOSC_6945 and tr_A0A1V9XTP1_A0A1V9XTP1_9ACAR_418985 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_G0MM49_G0MM49_CAEBE_135651 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_G0NV96_G0NV96_CAEBE_135651 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_E3MFL9_E3MFL9_CAERE_31234 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_A8WZ67_A8WZ67_CAEBR_6238 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_A0A1I7THM1_A0A1I7THM1_9PELO_1561998 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_A0A1I7THM2_A0A1I7THM2_9PELO_1561998 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_A0A261CAG4_A0A261CAG4_9PELO_1503980 are exactly identical! WARNING: Sequences tr_V6CLN5_V6CLN5_CAEEL_6239 and tr_A0A2G5VSX8_A0A2G5VSX8_9PELO_1611254 are exactly identical! WARNING: Sequences tr_B0W842_B0W842_CULQU_7176 and tr_B0W843_B0W843_CULQU_7176 are exactly identical! WARNING: Sequences tr_B0W842_B0W842_CULQU_7176 and tr_Q16I81_Q16I81_AEDAE_7159 are exactly identical! WARNING: Sequences tr_B0W842_B0W842_CULQU_7176 and tr_Q16QM8_Q16QM8_AEDAE_7159 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_H9IXZ4_H9IXZ4_BOMMO_7091 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_Q16Y23_Q16Y23_AEDAE_7159 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_T1HA20_T1HA20_RHOPR_13249 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_A0A067R7N9_A0A067R7N9_ZOONE_136037 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_A0A084VDR5_A0A084VDR5_ANOSI_74873 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_A0A1J1J8G6_A0A1J1J8G6_9DIPT_568069 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_A0A1W4WTN2_A0A1W4WTN2_AGRPL_224129 are exactly identical! WARNING: Sequences tr_B0WSA7_B0WSA7_CULQU_7176 and tr_A0A2J7QK93_A0A2J7QK93_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A3B5Q9B6_A0A3B5Q9B6_XIPMA_8083 and tr_I3JX82_I3JX82_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B5Q9B6_A0A3B5Q9B6_XIPMA_8083 and tr_A0A087XIG9_A0A087XIG9_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5Q9B6_A0A3B5Q9B6_XIPMA_8083 and tr_A0A2U9BVC2_A0A2U9BVC2_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A3B5QY44_A0A3B5QY44_XIPMA_8083 and tr_A0A087XWZ7_A0A087XWZ7_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_I3J123_I3J123_ORENI_8128 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_H2V7E7_H2V7E7_TAKRU_31033 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_H3CZD1_H3CZD1_TETNG_99883 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_A0A087YJI6_A0A087YJI6_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_A0A1S3T6Z2_A0A1S3T6Z2_SALSA_8030 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_A0A2I4ASA5_A0A2I4ASA5_9TELE_52670 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_A0A060X6J4_A0A060X6J4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_M4AFC5_M4AFC5_XIPMA_8083 and tr_A0A2U9C3L0_A0A2U9C3L0_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A088A1G4_A0A088A1G4_APIME_7460 and tr_F4X2R5_F4X2R5_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A088A1G4_A0A088A1G4_APIME_7460 and tr_A0A0L7RFH7_A0A0L7RFH7_9HYME_597456 are exactly identical! WARNING: Sequences tr_A0A088A1G4_A0A088A1G4_APIME_7460 and tr_A0A154PMF9_A0A154PMF9_9HYME_178035 are exactly identical! WARNING: Sequences tr_A0A088A1G4_A0A088A1G4_APIME_7460 and tr_A0A195BLJ7_A0A195BLJ7_9HYME_520822 are exactly identical! WARNING: Sequences tr_H9J301_H9J301_BOMMO_7091 and tr_A0A212EKH1_A0A212EKH1_DANPL_278856 are exactly identical! WARNING: Sequences tr_H9J301_H9J301_BOMMO_7091 and tr_A0A0L7LAR8_A0A0L7LAR8_9NEOP_104452 are exactly identical! WARNING: Sequences tr_H9J301_H9J301_BOMMO_7091 and tr_A0A194QXX0_A0A194QXX0_PAPMA_76193 are exactly identical! WARNING: Sequences tr_H9J301_H9J301_BOMMO_7091 and tr_A0A194PNJ5_A0A194PNJ5_PAPXU_66420 are exactly identical! WARNING: Sequences tr_H9J301_H9J301_BOMMO_7091 and tr_A0A2A4JR89_A0A2A4JR89_HELVI_7102 are exactly identical! WARNING: Sequences tr_H2V0L1_H2V0L1_TAKRU_31033 and tr_H3DDR8_H3DDR8_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2V0L1_H2V0L1_TAKRU_31033 and tr_G3PLA1_G3PLA1_GASAC_69293 are exactly identical! WARNING: Sequences tr_A0A0K0JRY6_A0A0K0JRY6_BRUMA_6279 and tr_A0A0B2UW98_A0A0B2UW98_TOXCA_6265 are exactly identical! WARNING: Sequences tr_A0A0K0JRY6_A0A0K0JRY6_BRUMA_6279 and tr_A0A0N4TNU4_A0A0N4TNU4_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0K0JRY6_A0A0K0JRY6_BRUMA_6279 and tr_A0A0R3QQ51_A0A0R3QQ51_9BILA_42155 are exactly identical! WARNING: Sequences tr_A0A0K0JRY6_A0A0K0JRY6_BRUMA_6279 and tr_A0A0R3RYH9_A0A0R3RYH9_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A0K0JRY6_A0A0K0JRY6_BRUMA_6279 and tr_A0A1I7VF98_A0A1I7VF98_LOALO_7209 are exactly identical! WARNING: Sequences tr_A0A0K0JRZ8_A0A0K0JRZ8_BRUMA_6279 and tr_A0A044TGX1_A0A044TGX1_ONCVO_6282 are exactly identical! WARNING: Sequences tr_A0A0K0JRZ8_A0A0K0JRZ8_BRUMA_6279 and tr_A0A016SCJ5_A0A016SCJ5_9BILA_53326 are exactly identical! WARNING: Sequences tr_A0A0K0JRZ8_A0A0K0JRZ8_BRUMA_6279 and tr_A0A0K0CT22_A0A0K0CT22_ANGCA_6313 are exactly identical! WARNING: Sequences tr_A0A0K0JRZ8_A0A0K0JRZ8_BRUMA_6279 and tr_A0A0N4SXY2_A0A0N4SXY2_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0K0JRZ8_A0A0K0JRZ8_BRUMA_6279 and tr_A0A0R3QAH0_A0A0R3QAH0_9BILA_42155 are exactly identical! WARNING: Sequences tr_A0A0K0JRZ8_A0A0K0JRZ8_BRUMA_6279 and tr_A0A1I7VYL9_A0A1I7VYL9_LOALO_7209 are exactly identical! WARNING: Sequences tr_E5S392_E5S392_TRISP_6334 and tr_A0A0V0SMW5_A0A0V0SMW5_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5S392_E5S392_TRISP_6334 and tr_A0A0V0UQY6_A0A0V0UQY6_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5S392_E5S392_TRISP_6334 and tr_A0A0V1LP90_A0A0V1LP90_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5S392_E5S392_TRISP_6334 and tr_A0A0V0ZFI2_A0A0V0ZFI2_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5S392_E5S392_TRISP_6334 and tr_A0A0V1GZ03_A0A0V1GZ03_9BILA_268475 are exactly identical! WARNING: Sequences tr_E5SRB4_E5SRB4_TRISP_6334 and tr_A0A0V1MYE6_A0A0V1MYE6_9BILA_268474 are exactly identical! WARNING: Sequences tr_E5SRB4_E5SRB4_TRISP_6334 and tr_A0A060Y5N5_A0A060Y5N5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q7PNX2_Q7PNX2_ANOGA_7165 and tr_A0A084WMM5_A0A084WMM5_ANOSI_74873 are exactly identical! WARNING: Sequences tr_A0A212FMM9_A0A212FMM9_DANPL_278856 and tr_A0A0N1IPW2_A0A0N1IPW2_PAPMA_76193 are exactly identical! WARNING: Sequences tr_A0A212FMM9_A0A212FMM9_DANPL_278856 and tr_A0A0N1IJ22_A0A0N1IJ22_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A212FMM9_A0A212FMM9_DANPL_278856 and tr_A0A2A4J282_A0A2A4J282_HELVI_7102 are exactly identical! WARNING: Sequences tr_A0A139WK81_A0A139WK81_TRICA_7070 and tr_T1J493_T1J493_STRMM_126957 are exactly identical! WARNING: Sequences tr_A0A139WK81_A0A139WK81_TRICA_7070 and tr_A0A1W4WY59_A0A1W4WY59_AGRPL_224129 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_J9K3Q1_J9K3Q1_ACYPI_7029 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_E0V9S0_E0V9S0_PEDHC_121224 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_R7UAK3_R7UAK3_CAPTE_283909 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_T1I674_T1I674_RHOPR_13249 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_N6SZE3_N6SZE3_DENPD_77166 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_A0A1S4EI65_A0A1S4EI65_DIACI_121845 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_A0A3Q0J4I4_A0A3Q0J4I4_DIACI_121845 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_A0A2J7QK94_A0A2J7QK94_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A139WM18_A0A139WM18_TRICA_7070 and tr_A0A2P8ZC88_A0A2P8ZC88_BLAGE_6973 are exactly identical! WARNING: Sequences tr_G3NCV7_G3NCV7_GASAC_69293 and tr_A0A1S3NB44_A0A1S3NB44_SALSA_8030 are exactly identical! WARNING: Sequences tr_G3NCV7_G3NCV7_GASAC_69293 and tr_A0A1S3QCJ7_A0A1S3QCJ7_SALSA_8030 are exactly identical! WARNING: Sequences tr_G3NCV7_G3NCV7_GASAC_69293 and tr_A0A060Y1G7_A0A060Y1G7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_G3NCV7_G3NCV7_GASAC_69293 and tr_A0A060YQ43_A0A060YQ43_ONCMY_8022 are exactly identical! WARNING: Sequences tr_G3WAH7_G3WAH7_SARHA_9305 and tr_A0A093PPZ5_A0A093PPZ5_9PASS_328815 are exactly identical! WARNING: Sequences tr_F7CGR1_F7CGR1_XENTR_8364 and tr_A0A1L8FZ88_A0A1L8FZ88_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q28CD2_Q28CD2_XENTR_8364 and tr_A0A1L8GFK6_A0A1L8GFK6_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q28CD2_Q28CD2_XENTR_8364 and tr_A0A1L8GLR2_A0A1L8GLR2_XENLA_8355 are exactly identical! WARNING: Sequences tr_E3LEQ9_E3LEQ9_CAERE_31234 and tr_A0A261CSN0_A0A261CSN0_9PELO_1503980 are exactly identical! WARNING: Sequences tr_A8XJQ1_A8XJQ1_CAEBR_6238 and tr_A0A2G5SSH2_A0A2G5SSH2_9PELO_1611254 are exactly identical! WARNING: Sequences tr_T1JZP0_T1JZP0_TETUR_32264 and tr_A0A1V9XCJ1_A0A1V9XCJ1_9ACAR_418985 are exactly identical! WARNING: Sequences tr_U3J3E9_U3J3E9_ANAPL_8839 and tr_A0A151NVA2_A0A151NVA2_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A3B1IUM8_A0A3B1IUM8_ASTMX_7994 and tr_A0A2D0PUK3_A0A2D0PUK3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_W5L2C6_W5L2C6_ASTMX_7994 and tr_A0A2D0PSN0_A0A2D0PSN0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_W5LWD4_W5LWD4_LEPOC_7918 and tr_W5LWI5_W5LWI5_LEPOC_7918 are exactly identical! WARNING: Sequences tr_A0A067QVP0_A0A067QVP0_ZOONE_136037 and tr_A0A194Q4U6_A0A194Q4U6_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A067QVP0_A0A067QVP0_ZOONE_136037 and tr_A0A151WK04_A0A151WK04_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A067QVP0_A0A067QVP0_ZOONE_136037 and tr_A0A2J7QPF4_A0A2J7QPF4_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A067QVP0_A0A067QVP0_ZOONE_136037 and tr_A0A2A3EQS0_A0A2A3EQS0_APICC_94128 are exactly identical! WARNING: Sequences tr_U4UHA3_U4UHA3_DENPD_77166 and tr_U4US23_U4US23_DENPD_77166 are exactly identical! WARNING: Sequences tr_A0A0K0F0T6_A0A0K0F0T6_STRVS_75913 and tr_A0A0K0ECY8_A0A0K0ECY8_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0F0T6_A0A0K0F0T6_STRVS_75913 and tr_A0A0N5BGB5_A0A0N5BGB5_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0EFU7_A0A0K0EFU7_STRER_6248 and tr_A0A090L5A6_A0A090L5A6_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0K0EFU7_A0A0K0EFU7_STRER_6248 and tr_A0A0N4ZXC9_A0A0N4ZXC9_PARTI_131310 are exactly identical! WARNING: Sequences tr_A0A0K0EFU7_A0A0K0EFU7_STRER_6248 and tr_A0A0N5CAV0_A0A0N5CAV0_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0N4TVS9_A0A0N4TVS9_BRUPA_6280 and tr_A0A0R3RRK0_A0A0R3RRK0_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A151NQ23_A0A151NQ23_ALLMI_8496 and tr_A0A3Q0FMN5_A0A3Q0FMN5_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A026W3C8_A0A026W3C8_OOCBI_2015173 and tr_A0A0M9A4M4_A0A0M9A4M4_9HYME_166423 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V1CIU2_A0A0V1CIU2_TRIBR_45882 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V0WQ29_A0A0V0WQ29_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V0V4J9_A0A0V0V4J9_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V0ZJ10_A0A0V0ZJ10_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V0XX68_A0A0V0XX68_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V1MDN1_A0A0V1MDN1_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V1P3W1_A0A0V1P3W1_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0SAP3_A0A0V0SAP3_9BILA_6336 and tr_A0A0V0U5D6_A0A0V0U5D6_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3NIV6_A0A1S3NIV6_SALSA_8030 and tr_A0A060XNW8_A0A060XNW8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NLF2_A0A1S3NLF2_SALSA_8030 and tr_A0A060XY78_A0A060XY78_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1D2NC86_A0A1D2NC86_ORCCI_48709 and tr_A0A2J7Q6X8_A0A2J7Q6X8_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A2I4CL41_A0A2I4CL41_9TELE_52670 and tr_A0A2U9CYS5_A0A2U9CYS5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A2D0QTY1_A0A2D0QTY1_ICTPU_7998 and tr_A0A2D0QTY7_A0A2D0QTY7_ICTPU_7998 are exactly identical! WARNING: Duplicate sequences found: 687 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1.raxml.reduced.phy Alignment comprises 1 partitions and 56 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 56 / 56 Gaps: 2.72 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 925 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 56 / 4480 [00:00:00] Data distribution: max. searches per worker: 20 Starting ML tree search with 20 distinct starting trees [00:00:00 -73825.227876] Initial branch length optimization [00:00:01 -56563.244784] Model parameter optimization (eps = 10.000000) [00:00:11 -56494.618014] AUTODETECT spr round 1 (radius: 5) [00:01:04 -26596.342847] AUTODETECT spr round 2 (radius: 10) [00:01:59 -15722.620614] AUTODETECT spr round 3 (radius: 15) [00:02:56 -11827.650584] AUTODETECT spr round 4 (radius: 20) [00:03:59 -10283.523905] AUTODETECT spr round 5 (radius: 25) [00:05:09 -9529.236660] SPR radius for FAST iterations: 25 (autodetect) [00:05:09 -9529.236660] Model parameter optimization (eps = 3.000000) [00:05:21 -9514.762215] FAST spr round 1 (radius: 25) [00:06:21 -7070.508833] FAST spr round 2 (radius: 25) [00:07:19 -6057.217440] FAST spr round 3 (radius: 25) [00:08:16 -5826.597947] FAST spr round 4 (radius: 25) [00:09:12 -5803.678812] FAST spr round 5 (radius: 25) [00:10:06 -5802.247078] FAST spr round 6 (radius: 25) [00:11:00 -5802.244831] Model parameter optimization (eps = 1.000000) [00:11:10 -5798.059409] SLOW spr round 1 (radius: 5) [00:12:01 -5797.977776] SLOW spr round 2 (radius: 10) [00:12:58 -5787.352502] SLOW spr round 3 (radius: 5) [00:13:51 -5783.254912] SLOW spr round 4 (radius: 5) [00:14:43 -5782.402248] SLOW spr round 5 (radius: 5) [00:15:33 -5782.364952] SLOW spr round 6 (radius: 10) [00:16:28 -5782.364247] SLOW spr round 7 (radius: 15) [00:17:33 -5768.724706] SLOW spr round 8 (radius: 5) [00:18:29 -5767.653751] SLOW spr round 9 (radius: 5) [00:19:20 -5767.651719] SLOW spr round 10 (radius: 10) [00:20:15 -5767.650941] SLOW spr round 11 (radius: 15) [00:21:18 -5767.279187] SLOW spr round 12 (radius: 5) [00:22:13 -5767.278515] SLOW spr round 13 (radius: 10) [00:23:09 -5767.278451] SLOW spr round 14 (radius: 15) [00:24:12 -5767.278430] SLOW spr round 15 (radius: 20) [00:25:26 -5766.057574] SLOW spr round 16 (radius: 5) [00:26:21 -5766.057512] SLOW spr round 17 (radius: 10) [00:27:18 -5764.392853] SLOW spr round 18 (radius: 5) [00:28:09 -5764.392503] SLOW spr round 19 (radius: 10) [00:29:04 -5764.392407] SLOW spr round 20 (radius: 15) [00:30:05 -5764.392358] SLOW spr round 21 (radius: 20) [00:31:16 -5764.392329] SLOW spr round 22 (radius: 25) [00:32:45 -5760.105544] SLOW spr round 23 (radius: 5) [00:33:42 -5759.837362] SLOW spr round 24 (radius: 5) [00:34:34 -5759.837139] SLOW spr round 25 (radius: 10) [00:35:29 -5759.836991] SLOW spr round 26 (radius: 15) [00:36:30 -5759.836861] SLOW spr round 27 (radius: 20) [00:37:43 -5759.836713] SLOW spr round 28 (radius: 25) [00:39:10 -5759.836469] Model parameter optimization (eps = 0.100000) [00:39:17] ML tree search #1, logLikelihood: -5759.327365 [00:39:17 -73636.619374] Initial branch length optimization [00:39:18 -56271.169442] Model parameter optimization (eps = 10.000000) [00:39:30 -56162.979882] AUTODETECT spr round 1 (radius: 5) [00:40:24 -26039.048056] AUTODETECT spr round 2 (radius: 10) [00:41:19 -16283.374572] AUTODETECT spr round 3 (radius: 15) [00:42:18 -11601.210589] AUTODETECT spr round 4 (radius: 20) [00:43:23 -9814.457496] AUTODETECT spr round 5 (radius: 25) [00:44:29 -8575.209533] SPR radius for FAST iterations: 25 (autodetect) [00:44:29 -8575.209533] Model parameter optimization (eps = 3.000000) [00:44:40 -8566.560154] FAST spr round 1 (radius: 25) [00:45:41 -6514.105668] FAST spr round 2 (radius: 25) [00:46:38 -6130.183660] FAST spr round 3 (radius: 25) [00:47:34 -6028.980120] FAST spr round 4 (radius: 25) [00:48:30 -6006.957862] FAST spr round 5 (radius: 25) [00:49:24 -6006.878995] Model parameter optimization (eps = 1.000000) [00:49:33 -6005.411859] SLOW spr round 1 (radius: 5) [00:50:24 -6004.641492] SLOW spr round 2 (radius: 5) [00:51:16 -6002.691237] SLOW spr round 3 (radius: 5) [00:52:07 -6002.690387] SLOW spr round 4 (radius: 10) [00:53:05 -5896.545595] SLOW spr round 5 (radius: 5) [00:53:59 -5834.967954] SLOW spr round 6 (radius: 5) [00:54:52 -5832.955490] SLOW spr round 7 (radius: 5) [00:55:45 -5832.928343] SLOW spr round 8 (radius: 10) [00:56:42 -5832.926874] SLOW spr round 9 (radius: 15) [00:57:44 -5795.762200] SLOW spr round 10 (radius: 5) [00:58:42 -5792.300355] SLOW spr round 11 (radius: 5) [00:59:36 -5792.299457] SLOW spr round 12 (radius: 10) [01:00:35 -5791.387478] SLOW spr round 13 (radius: 5) [01:01:29 -5791.386291] SLOW spr round 14 (radius: 10) [01:02:27 -5790.595049] SLOW spr round 15 (radius: 5) [01:03:21 -5790.594790] SLOW spr round 16 (radius: 10) [01:04:19 -5790.594617] SLOW spr round 17 (radius: 15) [01:05:23 -5790.594458] SLOW spr round 18 (radius: 20) [01:06:37 -5784.112801] SLOW spr round 19 (radius: 5) [01:07:34 -5784.112643] SLOW spr round 20 (radius: 10) [01:08:34 -5783.498391] SLOW spr round 21 (radius: 5) [01:09:28 -5783.310187] SLOW spr round 22 (radius: 5) [01:10:19 -5783.309293] SLOW spr round 23 (radius: 10) [01:11:16 -5783.309101] SLOW spr round 24 (radius: 15) [01:12:18 -5783.309000] SLOW spr round 25 (radius: 20) [01:13:28 -5777.195973] SLOW spr round 26 (radius: 5) [01:14:27 -5776.861920] SLOW spr round 27 (radius: 5) [01:15:20 -5776.861608] SLOW spr round 28 (radius: 10) [01:16:17 -5776.861461] SLOW spr round 29 (radius: 15) [01:17:18 -5776.861333] SLOW spr round 30 (radius: 20) [01:18:25 -5774.728576] SLOW spr round 31 (radius: 5) [01:19:20 -5774.728389] SLOW spr round 32 (radius: 10) [01:20:17 -5774.728261] SLOW spr round 33 (radius: 15) [01:21:18 -5774.728143] SLOW spr round 34 (radius: 20) [01:22:29 -5774.727912] SLOW spr round 35 (radius: 25) [01:23:50 -5774.727805] Model parameter optimization (eps = 0.100000) [01:24:00] ML tree search #2, logLikelihood: -5774.073468 [01:24:00 -74972.034723] Initial branch length optimization [01:24:01 -57403.244494] Model parameter optimization (eps = 10.000000) [01:24:16 -57329.707025] AUTODETECT spr round 1 (radius: 5) [01:25:11 -25809.436145] AUTODETECT spr round 2 (radius: 10) [01:26:06 -14378.638243] AUTODETECT spr round 3 (radius: 15) [01:27:04 -10631.135447] AUTODETECT spr round 4 (radius: 20) [01:28:09 -9262.213618] AUTODETECT spr round 5 (radius: 25) [01:29:17 -7919.819897] SPR radius for FAST iterations: 25 (autodetect) [01:29:17 -7919.819897] Model parameter optimization (eps = 3.000000) [01:29:28 -7902.941164] FAST spr round 1 (radius: 25) [01:30:29 -6584.324436] FAST spr round 2 (radius: 25) [01:31:27 -6527.338112] FAST spr round 3 (radius: 25) [01:32:23 -6521.905841] FAST spr round 4 (radius: 25) [01:33:17 -6518.878312] FAST spr round 5 (radius: 25) [01:34:10 -6518.597998] FAST spr round 6 (radius: 25) [01:35:03 -6518.597846] Model parameter optimization (eps = 1.000000) [01:35:08 -6517.735006] SLOW spr round 1 (radius: 5) [01:36:00 -6511.428976] SLOW spr round 2 (radius: 5) [01:36:53 -6511.144790] SLOW spr round 3 (radius: 5) [01:37:44 -6511.136566] SLOW spr round 4 (radius: 10) [01:38:42 -6507.699217] SLOW spr round 5 (radius: 5) [01:39:37 -6506.875849] SLOW spr round 6 (radius: 5) [01:40:29 -6506.875378] SLOW spr round 7 (radius: 10) [01:41:26 -6487.479549] SLOW spr round 8 (radius: 5) [01:42:20 -6487.479477] SLOW spr round 9 (radius: 10) [01:43:16 -6486.687614] SLOW spr round 10 (radius: 5) [01:44:09 -6486.687576] SLOW spr round 11 (radius: 10) [01:45:05 -6486.687575] SLOW spr round 12 (radius: 15) [01:46:08 -6483.431214] SLOW spr round 13 (radius: 5) [01:47:04 -6483.431160] SLOW spr round 14 (radius: 10) [01:48:01 -6483.431146] SLOW spr round 15 (radius: 15) [01:49:03 -6483.431145] SLOW spr round 16 (radius: 20) [01:50:13 -6481.366812] SLOW spr round 17 (radius: 5) [01:51:11 -6481.365027] SLOW spr round 18 (radius: 10) [01:52:08 -6480.838893] SLOW spr round 19 (radius: 5) [01:53:02 -6479.030348] SLOW spr round 20 (radius: 5) [01:53:54 -6479.029726] SLOW spr round 21 (radius: 10) [01:54:49 -6479.029718] SLOW spr round 22 (radius: 15) [01:55:49 -6479.029717] SLOW spr round 23 (radius: 20) [01:56:56 -6479.029717] SLOW spr round 24 (radius: 25) [01:58:13 -6479.010959] Model parameter optimization (eps = 0.100000) [01:58:21] ML tree search #3, logLikelihood: -6478.417404 [01:58:21 -74195.073917] Initial branch length optimization [01:58:22 -57083.894319] Model parameter optimization (eps = 10.000000) [01:58:33 -57016.399917] AUTODETECT spr round 1 (radius: 5) [01:59:28 -27138.885263] AUTODETECT spr round 2 (radius: 10) [02:00:23 -17198.736611] AUTODETECT spr round 3 (radius: 15) [02:01:24 -11789.229375] AUTODETECT spr round 4 (radius: 20) [02:02:28 -10021.145471] AUTODETECT spr round 5 (radius: 25) [02:03:41 -8642.356086] SPR radius for FAST iterations: 25 (autodetect) [02:03:41 -8642.356086] Model parameter optimization (eps = 3.000000) [02:03:50 -8630.053382] FAST spr round 1 (radius: 25) [02:04:50 -6603.115527] FAST spr round 2 (radius: 25) [02:05:46 -6501.747794] FAST spr round 3 (radius: 25) [02:06:40 -6493.047241] FAST spr round 4 (radius: 25) [02:07:33 -6490.268984] FAST spr round 5 (radius: 25) [02:08:25 -6490.131400] FAST spr round 6 (radius: 25) [02:09:17 -6490.130330] Model parameter optimization (eps = 1.000000) [02:09:26 -6487.920820] SLOW spr round 1 (radius: 5) [02:10:18 -6487.564651] SLOW spr round 2 (radius: 5) [02:11:08 -6487.563541] SLOW spr round 3 (radius: 10) [02:12:04 -6486.071436] SLOW spr round 4 (radius: 5) [02:12:59 -6481.621274] SLOW spr round 5 (radius: 5) [02:13:52 -6480.220405] SLOW spr round 6 (radius: 5) [02:14:42 -6480.220053] SLOW spr round 7 (radius: 10) [02:15:37 -6480.219883] SLOW spr round 8 (radius: 15) [02:16:42 -6404.019520] SLOW spr round 9 (radius: 5) [02:17:38 -6398.372711] SLOW spr round 10 (radius: 5) [02:18:30 -6397.975574] SLOW spr round 11 (radius: 5) [02:19:21 -6396.629894] SLOW spr round 12 (radius: 5) [02:20:13 -6358.328949] SLOW spr round 13 (radius: 5) [02:21:05 -6356.993802] SLOW spr round 14 (radius: 5) [02:21:56 -6356.991994] SLOW spr round 15 (radius: 10) [02:22:51 -6353.079094] SLOW spr round 16 (radius: 5) [02:23:45 -6344.831232] SLOW spr round 17 (radius: 5) [02:24:37 -6344.831154] SLOW spr round 18 (radius: 10) [02:25:34 -6343.853456] SLOW spr round 19 (radius: 5) [02:26:28 -6343.853296] SLOW spr round 20 (radius: 10) [02:27:25 -6343.842301] SLOW spr round 21 (radius: 15) [02:28:29 -6339.198232] SLOW spr round 22 (radius: 5) [02:29:26 -6339.061207] SLOW spr round 23 (radius: 5) [02:30:20 -6339.061033] SLOW spr round 24 (radius: 10) [02:31:17 -6339.060942] SLOW spr round 25 (radius: 15) [02:32:19 -6339.060883] SLOW spr round 26 (radius: 20) [02:33:28 -6335.882765] SLOW spr round 27 (radius: 5) [02:34:27 -6335.858779] SLOW spr round 28 (radius: 10) [02:35:24 -6335.858754] SLOW spr round 29 (radius: 15) [02:36:25 -6333.699405] SLOW spr round 30 (radius: 5) [02:37:21 -6332.341896] SLOW spr round 31 (radius: 5) [02:38:14 -6332.339242] SLOW spr round 32 (radius: 10) [02:39:15 -6332.338297] SLOW spr round 33 (radius: 15) [02:40:20 -6332.337938] SLOW spr round 34 (radius: 20) [02:41:28 -6332.337791] SLOW spr round 35 (radius: 25) [02:42:52 -6331.568310] SLOW spr round 36 (radius: 5) [02:43:49 -6331.568172] SLOW spr round 37 (radius: 10) [02:44:47 -6331.568090] SLOW spr round 38 (radius: 15) [02:45:52 -6169.416327] SLOW spr round 39 (radius: 5) [02:46:50 -6024.052198] SLOW spr round 40 (radius: 5) [02:47:45 -6021.949663] SLOW spr round 41 (radius: 5) [02:48:40 -6020.198414] SLOW spr round 42 (radius: 5) [02:49:34 -6019.875069] SLOW spr round 43 (radius: 5) [02:50:27 -6019.871587] SLOW spr round 44 (radius: 10) [02:51:25 -6017.067898] SLOW spr round 45 (radius: 5) [02:52:19 -6017.067652] SLOW spr round 46 (radius: 10) [02:53:17 -6017.067519] SLOW spr round 47 (radius: 15) [02:54:19 -6011.605972] SLOW spr round 48 (radius: 5) [02:55:16 -6011.605633] SLOW spr round 49 (radius: 10) [02:56:14 -6011.605496] SLOW spr round 50 (radius: 15) [02:57:15 -6011.605394] SLOW spr round 51 (radius: 20) [02:58:25 -6011.497197] SLOW spr round 52 (radius: 5) [02:59:25 -6010.202136] SLOW spr round 53 (radius: 5) [03:00:18 -6010.199962] SLOW spr round 54 (radius: 10) [03:01:15 -6010.075795] SLOW spr round 55 (radius: 5) [03:02:09 -6010.075386] SLOW spr round 56 (radius: 10) [03:03:06 -6010.075119] SLOW spr round 57 (radius: 15) [03:04:09 -6010.074861] SLOW spr round 58 (radius: 20) [03:05:21 -5970.649480] SLOW spr round 59 (radius: 5) [03:06:20 -5908.768134] SLOW spr round 60 (radius: 5) [03:07:15 -5900.650759] SLOW spr round 61 (radius: 5) [03:08:08 -5900.642958] SLOW spr round 62 (radius: 10) [03:09:05 -5899.657967] SLOW spr round 63 (radius: 5) [03:09:59 -5899.656912] SLOW spr round 64 (radius: 10) [03:10:55 -5899.656182] SLOW spr round 65 (radius: 15) [03:11:55 -5899.653977] SLOW spr round 66 (radius: 20) [03:13:01 -5899.599859] SLOW spr round 67 (radius: 25) [03:14:18 -5865.142281] SLOW spr round 68 (radius: 5) [03:15:19 -5839.111814] SLOW spr round 69 (radius: 5) [03:16:11 -5838.893293] SLOW spr round 70 (radius: 5) [03:17:03 -5838.891537] SLOW spr round 71 (radius: 10) [03:17:59 -5838.741245] SLOW spr round 72 (radius: 5) [03:18:52 -5838.740590] SLOW spr round 73 (radius: 10) [03:19:48 -5838.739917] SLOW spr round 74 (radius: 15) [03:20:49 -5838.739206] SLOW spr round 75 (radius: 20) [03:21:56 -5838.738492] SLOW spr round 76 (radius: 25) [03:23:16 -5838.737756] Model parameter optimization (eps = 0.100000) [03:23:27] ML tree search #4, logLikelihood: -5837.238075 [03:23:27 -74265.762544] Initial branch length optimization [03:23:28 -56609.535915] Model parameter optimization (eps = 10.000000) [03:23:42 -56565.309573] AUTODETECT spr round 1 (radius: 5) [03:24:37 -26097.051347] AUTODETECT spr round 2 (radius: 10) [03:25:33 -18197.116026] AUTODETECT spr round 3 (radius: 15) [03:26:35 -11915.823004] AUTODETECT spr round 4 (radius: 20) [03:27:37 -9968.780396] AUTODETECT spr round 5 (radius: 25) [03:28:46 -9126.474313] SPR radius for FAST iterations: 25 (autodetect) [03:28:46 -9126.474313] Model parameter optimization (eps = 3.000000) [03:28:55 -9116.246279] FAST spr round 1 (radius: 25) [03:29:56 -7153.463215] FAST spr round 2 (radius: 25) [03:30:56 -6468.543471] FAST spr round 3 (radius: 25) [03:31:54 -6348.728087] FAST spr round 4 (radius: 25) [03:32:52 -6343.856789] FAST spr round 5 (radius: 25) [03:33:47 -6343.502977] FAST spr round 6 (radius: 25) [03:34:42 -6343.450243] Model parameter optimization (eps = 1.000000) [03:34:51 -6341.811435] SLOW spr round 1 (radius: 5) [03:35:44 -6338.652100] SLOW spr round 2 (radius: 5) [03:36:36 -6337.965414] SLOW spr round 3 (radius: 5) [03:37:28 -6337.769464] SLOW spr round 4 (radius: 5) [03:38:18 -6337.769376] SLOW spr round 5 (radius: 10) [03:39:19 -6255.751639] SLOW spr round 6 (radius: 5) [03:40:15 -6224.775701] SLOW spr round 7 (radius: 5) [03:41:08 -6223.645344] SLOW spr round 8 (radius: 5) [03:41:59 -6223.642724] SLOW spr round 9 (radius: 10) [03:42:55 -6223.640850] SLOW spr round 10 (radius: 15) [03:43:59 -6169.620853] SLOW spr round 11 (radius: 5) [03:44:56 -6113.626036] SLOW spr round 12 (radius: 5) [03:45:51 -6112.264839] SLOW spr round 13 (radius: 5) [03:46:46 -6112.264246] SLOW spr round 14 (radius: 10) [03:47:43 -6109.436947] SLOW spr round 15 (radius: 5) [03:48:36 -6109.436476] SLOW spr round 16 (radius: 10) [03:49:35 -6109.436043] SLOW spr round 17 (radius: 15) [03:50:39 -6107.197263] SLOW spr round 18 (radius: 5) [03:51:36 -6107.196935] SLOW spr round 19 (radius: 10) [03:52:34 -6105.520669] SLOW spr round 20 (radius: 5) [03:53:28 -6105.520431] SLOW spr round 21 (radius: 10) [03:54:24 -6105.520204] SLOW spr round 22 (radius: 15) [03:55:27 -6103.971016] SLOW spr round 23 (radius: 5) [03:56:23 -6103.970965] SLOW spr round 24 (radius: 10) [03:57:22 -6103.970963] SLOW spr round 25 (radius: 15) [03:58:26 -6103.970962] SLOW spr round 26 (radius: 20) [03:59:35 -6077.466913] SLOW spr round 27 (radius: 5) [04:00:32 -6064.663711] SLOW spr round 28 (radius: 5) [04:01:23 -6064.663584] SLOW spr round 29 (radius: 10) [04:02:20 -6064.663552] SLOW spr round 30 (radius: 15) [04:03:22 -6064.663544] SLOW spr round 31 (radius: 20) [04:04:30 -6064.663542] SLOW spr round 32 (radius: 25) [04:05:48 -6064.663541] Model parameter optimization (eps = 0.100000) [04:05:56] ML tree search #5, logLikelihood: -6064.495796 [04:05:56 -73989.180978] Initial branch length optimization [04:05:57 -56379.901222] Model parameter optimization (eps = 10.000000) [04:06:09 -56316.510435] AUTODETECT spr round 1 (radius: 5) [04:07:06 -26498.394442] AUTODETECT spr round 2 (radius: 10) [04:08:01 -17571.231934] AUTODETECT spr round 3 (radius: 15) [04:09:04 -12592.825068] AUTODETECT spr round 4 (radius: 20) [04:10:08 -9199.565693] AUTODETECT spr round 5 (radius: 25) [04:11:18 -7985.573405] SPR radius for FAST iterations: 25 (autodetect) [04:11:18 -7985.573405] Model parameter optimization (eps = 3.000000) [04:11:29 -7974.828605] FAST spr round 1 (radius: 25) [04:12:31 -6611.818791] FAST spr round 2 (radius: 25) [04:13:30 -6458.358604] FAST spr round 3 (radius: 25) [04:14:28 -6427.067096] FAST spr round 4 (radius: 25) [04:15:23 -6427.065789] Model parameter optimization (eps = 1.000000) [04:15:33 -6425.448080] SLOW spr round 1 (radius: 5) [04:16:26 -6424.424991] SLOW spr round 2 (radius: 5) [04:17:18 -6424.415445] SLOW spr round 3 (radius: 10) [04:18:17 -6334.987464] SLOW spr round 4 (radius: 5) [04:19:13 -6303.800860] SLOW spr round 5 (radius: 5) [04:20:07 -6302.112706] SLOW spr round 6 (radius: 5) [04:20:59 -6302.112381] SLOW spr round 7 (radius: 10) [04:21:55 -6302.112175] SLOW spr round 8 (radius: 15) [04:23:02 -6100.566963] SLOW spr round 9 (radius: 5) [04:24:01 -6084.334614] SLOW spr round 10 (radius: 5) [04:24:56 -6083.030656] SLOW spr round 11 (radius: 5) [04:25:50 -6082.875403] SLOW spr round 12 (radius: 5) [04:26:43 -6082.874451] SLOW spr round 13 (radius: 10) [04:27:40 -6082.828860] SLOW spr round 14 (radius: 15) [04:28:43 -6082.748303] SLOW spr round 15 (radius: 20) [04:29:55 -6077.982885] SLOW spr round 16 (radius: 5) [04:30:53 -6077.982356] SLOW spr round 17 (radius: 10) [04:31:52 -6077.981910] SLOW spr round 18 (radius: 15) [04:32:55 -6077.981523] SLOW spr round 19 (radius: 20) [04:34:07 -6077.981189] SLOW spr round 20 (radius: 25) [04:35:25 -6077.980899] Model parameter optimization (eps = 0.100000) [04:35:37] ML tree search #6, logLikelihood: -6076.734879 [04:35:37 -75004.664202] Initial branch length optimization [04:35:38 -57231.313455] Model parameter optimization (eps = 10.000000) [04:35:56 -57189.116624] AUTODETECT spr round 1 (radius: 5) [04:36:52 -26348.946090] AUTODETECT spr round 2 (radius: 10) [04:37:48 -16789.105170] AUTODETECT spr round 3 (radius: 15) [04:38:46 -12762.889673] AUTODETECT spr round 4 (radius: 20) [04:39:53 -10178.263244] AUTODETECT spr round 5 (radius: 25) [04:41:08 -8303.853705] SPR radius for FAST iterations: 25 (autodetect) [04:41:08 -8303.853705] Model parameter optimization (eps = 3.000000) [04:41:19 -8295.060614] FAST spr round 1 (radius: 25) [04:42:20 -6317.526736] FAST spr round 2 (radius: 25) [04:43:20 -5988.882423] FAST spr round 3 (radius: 25) [04:44:19 -5895.681860] FAST spr round 4 (radius: 25) [04:45:16 -5892.529828] FAST spr round 5 (radius: 25) [04:46:12 -5889.372369] FAST spr round 6 (radius: 25) [04:47:06 -5889.370906] Model parameter optimization (eps = 1.000000) [04:47:16 -5887.669772] SLOW spr round 1 (radius: 5) [04:48:08 -5886.555412] SLOW spr round 2 (radius: 5) [04:48:59 -5886.555109] SLOW spr round 3 (radius: 10) [04:49:57 -5884.128741] SLOW spr round 4 (radius: 5) [04:50:51 -5878.955978] SLOW spr round 5 (radius: 5) [04:51:44 -5878.303398] SLOW spr round 6 (radius: 5) [04:52:37 -5878.285488] SLOW spr round 7 (radius: 10) [04:53:34 -5878.285481] SLOW spr round 8 (radius: 15) [04:54:39 -5876.002137] SLOW spr round 9 (radius: 5) [04:55:37 -5873.735981] SLOW spr round 10 (radius: 5) [04:56:30 -5873.396641] SLOW spr round 11 (radius: 5) [04:57:22 -5873.396442] SLOW spr round 12 (radius: 10) [04:58:20 -5873.396399] SLOW spr round 13 (radius: 15) [04:59:25 -5873.363999] SLOW spr round 14 (radius: 20) [05:00:37 -5873.144717] SLOW spr round 15 (radius: 5) [05:01:37 -5871.827402] SLOW spr round 16 (radius: 5) [05:02:31 -5870.731587] SLOW spr round 17 (radius: 5) [05:03:23 -5870.730291] SLOW spr round 18 (radius: 10) [05:04:20 -5870.730222] SLOW spr round 19 (radius: 15) [05:05:26 -5860.406716] SLOW spr round 20 (radius: 5) [05:06:24 -5858.324050] SLOW spr round 21 (radius: 5) [05:07:17 -5858.321733] SLOW spr round 22 (radius: 10) [05:08:15 -5858.320568] SLOW spr round 23 (radius: 15) [05:09:20 -5858.319870] SLOW spr round 24 (radius: 20) [05:10:30 -5857.106382] SLOW spr round 25 (radius: 5) [05:11:29 -5857.097957] SLOW spr round 26 (radius: 10) [05:12:29 -5857.097801] SLOW spr round 27 (radius: 15) [05:13:33 -5856.881509] SLOW spr round 28 (radius: 5) [05:14:30 -5856.860048] SLOW spr round 29 (radius: 10) [05:15:29 -5856.857538] SLOW spr round 30 (radius: 15) [05:16:33 -5856.856159] SLOW spr round 31 (radius: 20) [05:17:43 -5856.855373] SLOW spr round 32 (radius: 25) [05:19:05 -5856.854898] Model parameter optimization (eps = 0.100000) [05:19:12] ML tree search #7, logLikelihood: -5856.152334 [05:19:12 -74096.109242] Initial branch length optimization [05:19:13 -56640.820706] Model parameter optimization (eps = 10.000000) [05:19:22 -56597.077086] AUTODETECT spr round 1 (radius: 5) [05:20:17 -26139.222068] AUTODETECT spr round 2 (radius: 10) [05:21:12 -15704.235399] AUTODETECT spr round 3 (radius: 15) [05:22:14 -11530.813423] AUTODETECT spr round 4 (radius: 20) [05:23:21 -9402.539046] AUTODETECT spr round 5 (radius: 25) [05:24:32 -8118.799471] SPR radius for FAST iterations: 25 (autodetect) [05:24:32 -8118.799471] Model parameter optimization (eps = 3.000000) [05:24:45 -8107.039975] FAST spr round 1 (radius: 25) [05:25:47 -6426.783717] FAST spr round 2 (radius: 25) [05:26:45 -6216.056895] FAST spr round 3 (radius: 25) [05:27:44 -6121.403659] FAST spr round 4 (radius: 25) [05:28:42 -6103.478866] FAST spr round 5 (radius: 25) [05:29:38 -6101.740194] FAST spr round 6 (radius: 25) [05:30:33 -6101.144984] FAST spr round 7 (radius: 25) [05:31:29 -6101.144748] Model parameter optimization (eps = 1.000000) [05:31:38 -6098.712808] SLOW spr round 1 (radius: 5) [05:32:31 -6098.230134] SLOW spr round 2 (radius: 5) [05:33:24 -6098.221317] SLOW spr round 3 (radius: 10) [05:34:22 -6096.907707] SLOW spr round 4 (radius: 5) [05:35:17 -6094.944566] SLOW spr round 5 (radius: 5) [05:36:10 -6094.654303] SLOW spr round 6 (radius: 5) [05:37:03 -6094.591239] SLOW spr round 7 (radius: 10) [05:38:00 -6093.218708] SLOW spr round 8 (radius: 5) [05:38:55 -6093.218427] SLOW spr round 9 (radius: 10) [05:39:53 -6093.218060] SLOW spr round 10 (radius: 15) [05:40:57 -5972.230392] SLOW spr round 11 (radius: 5) [05:41:55 -5807.217653] SLOW spr round 12 (radius: 5) [05:42:49 -5800.412414] SLOW spr round 13 (radius: 5) [05:43:42 -5800.384168] SLOW spr round 14 (radius: 10) [05:44:40 -5792.958368] SLOW spr round 15 (radius: 5) [05:45:36 -5792.476796] SLOW spr round 16 (radius: 5) [05:46:29 -5792.475849] SLOW spr round 17 (radius: 10) [05:47:26 -5792.475148] SLOW spr round 18 (radius: 15) [05:48:30 -5790.519137] SLOW spr round 19 (radius: 5) [05:49:27 -5790.518987] SLOW spr round 20 (radius: 10) [05:50:25 -5790.518791] SLOW spr round 21 (radius: 15) [05:51:26 -5790.518670] SLOW spr round 22 (radius: 20) [05:52:34 -5787.521063] SLOW spr round 23 (radius: 5) [05:53:32 -5787.520935] SLOW spr round 24 (radius: 10) [05:54:29 -5787.520785] SLOW spr round 25 (radius: 15) [05:55:32 -5787.520561] SLOW spr round 26 (radius: 20) [05:56:41 -5787.520354] SLOW spr round 27 (radius: 25) [05:58:02 -5786.346430] SLOW spr round 28 (radius: 5) [05:59:00 -5786.342112] SLOW spr round 29 (radius: 10) [05:59:58 -5786.341142] SLOW spr round 30 (radius: 15) [06:01:00 -5786.028516] SLOW spr round 31 (radius: 5) [06:01:56 -5786.028427] SLOW spr round 32 (radius: 10) [06:02:54 -5785.976890] SLOW spr round 33 (radius: 15) [06:03:56 -5785.965249] SLOW spr round 34 (radius: 20) [06:05:05 -5785.954023] SLOW spr round 35 (radius: 25) [06:06:24 -5784.888681] SLOW spr round 36 (radius: 5) [06:07:22 -5783.595845] SLOW spr round 37 (radius: 5) [06:08:15 -5783.171095] SLOW spr round 38 (radius: 5) [06:09:05 -5783.171038] SLOW spr round 39 (radius: 10) [06:10:00 -5783.134420] SLOW spr round 40 (radius: 15) [06:10:59 -5783.134252] SLOW spr round 41 (radius: 20) [06:12:05 -5783.134085] SLOW spr round 42 (radius: 25) [06:13:23 -5783.133919] Model parameter optimization (eps = 0.100000) [06:13:33] ML tree search #8, logLikelihood: -5781.401215 [06:13:34 -75451.911060] Initial branch length optimization [06:13:35 -57524.999275] Model parameter optimization (eps = 10.000000) [06:13:47 -57490.511948] AUTODETECT spr round 1 (radius: 5) [06:14:41 -26277.389636] AUTODETECT spr round 2 (radius: 10) [06:15:35 -16304.274667] AUTODETECT spr round 3 (radius: 15) [06:16:34 -12328.765464] AUTODETECT spr round 4 (radius: 20) [06:17:38 -9235.362413] AUTODETECT spr round 5 (radius: 25) [06:18:49 -8013.478131] SPR radius for FAST iterations: 25 (autodetect) [06:18:49 -8013.478131] Model parameter optimization (eps = 3.000000) [06:18:59 -8002.227231] FAST spr round 1 (radius: 25) [06:19:59 -6074.070546] FAST spr round 2 (radius: 25) [06:20:56 -5855.427349] FAST spr round 3 (radius: 25) [06:21:52 -5850.065153] FAST spr round 4 (radius: 25) [06:22:46 -5849.917701] FAST spr round 5 (radius: 25) [06:23:40 -5849.160032] FAST spr round 6 (radius: 25) [06:24:33 -5849.159960] Model parameter optimization (eps = 1.000000) [06:24:41 -5844.682687] SLOW spr round 1 (radius: 5) [06:25:32 -5842.516890] SLOW spr round 2 (radius: 5) [06:26:22 -5841.614620] SLOW spr round 3 (radius: 5) [06:27:13 -5841.133868] SLOW spr round 4 (radius: 5) [06:28:04 -5841.112676] SLOW spr round 5 (radius: 10) [06:28:59 -5841.112211] SLOW spr round 6 (radius: 15) [06:30:01 -5841.111834] SLOW spr round 7 (radius: 20) [06:31:11 -5840.534282] SLOW spr round 8 (radius: 5) [06:32:08 -5839.217223] SLOW spr round 9 (radius: 5) [06:33:00 -5838.913098] SLOW spr round 10 (radius: 5) [06:33:52 -5838.445982] SLOW spr round 11 (radius: 5) [06:34:42 -5838.445673] SLOW spr round 12 (radius: 10) [06:35:37 -5838.445459] SLOW spr round 13 (radius: 15) [06:36:38 -5838.445302] SLOW spr round 14 (radius: 20) [06:37:44 -5838.445187] SLOW spr round 15 (radius: 25) [06:39:02 -5833.879085] SLOW spr round 16 (radius: 5) [06:39:59 -5832.628017] SLOW spr round 17 (radius: 5) [06:40:51 -5832.627331] SLOW spr round 18 (radius: 10) [06:41:46 -5832.607130] SLOW spr round 19 (radius: 15) [06:42:48 -5830.941067] SLOW spr round 20 (radius: 5) [06:43:42 -5830.940820] SLOW spr round 21 (radius: 10) [06:44:38 -5825.855535] SLOW spr round 22 (radius: 5) [06:45:29 -5825.855519] SLOW spr round 23 (radius: 10) [06:46:25 -5825.855449] SLOW spr round 24 (radius: 15) [06:47:25 -5825.855408] SLOW spr round 25 (radius: 20) [06:48:32 -5825.855345] SLOW spr round 26 (radius: 25) [06:49:48 -5824.754970] SLOW spr round 27 (radius: 5) [06:50:43 -5824.754948] SLOW spr round 28 (radius: 10) [06:51:40 -5824.754907] SLOW spr round 29 (radius: 15) [06:52:41 -5824.754896] SLOW spr round 30 (radius: 20) [06:53:46 -5824.754889] SLOW spr round 31 (radius: 25) [06:55:04 -5824.754852] Model parameter optimization (eps = 0.100000) [06:55:10] ML tree search #9, logLikelihood: -5824.525728 [06:55:10 -76118.661523] Initial branch length optimization [06:55:11 -58814.302872] Model parameter optimization (eps = 10.000000) [06:55:24 -58769.047875] AUTODETECT spr round 1 (radius: 5) [06:56:19 -26193.492683] AUTODETECT spr round 2 (radius: 10) [06:57:13 -16112.137995] AUTODETECT spr round 3 (radius: 15) [06:58:11 -11308.814078] AUTODETECT spr round 4 (radius: 20) [06:59:19 -8673.313083] AUTODETECT spr round 5 (radius: 25) [07:00:24 -8131.957161] SPR radius for FAST iterations: 25 (autodetect) [07:00:24 -8131.957161] Model parameter optimization (eps = 3.000000) [07:00:35 -8119.371233] FAST spr round 1 (radius: 25) [07:01:36 -6388.474249] FAST spr round 2 (radius: 25) [07:02:33 -6214.820587] FAST spr round 3 (radius: 25) [07:03:29 -6148.808727] FAST spr round 4 (radius: 25) [07:04:22 -6147.727323] FAST spr round 5 (radius: 25) [07:05:15 -6147.723627] Model parameter optimization (eps = 1.000000) [07:05:25 -6146.035992] SLOW spr round 1 (radius: 5) [07:06:15 -6145.487906] SLOW spr round 2 (radius: 5) [07:07:06 -6144.486369] SLOW spr round 3 (radius: 5) [07:07:56 -6143.815786] SLOW spr round 4 (radius: 5) [07:08:45 -6143.804822] SLOW spr round 5 (radius: 10) [07:09:40 -6138.110611] SLOW spr round 6 (radius: 5) [07:10:32 -6136.853434] SLOW spr round 7 (radius: 5) [07:11:23 -6136.013026] SLOW spr round 8 (radius: 5) [07:12:13 -6135.943260] SLOW spr round 9 (radius: 10) [07:13:09 -6135.931707] SLOW spr round 10 (radius: 15) [07:14:12 -6131.042027] SLOW spr round 11 (radius: 5) [07:15:07 -6099.611539] SLOW spr round 12 (radius: 5) [07:15:58 -6099.609998] SLOW spr round 13 (radius: 10) [07:16:54 -6099.608880] SLOW spr round 14 (radius: 15) [07:17:58 -6044.825794] SLOW spr round 15 (radius: 5) [07:18:53 -6043.570272] SLOW spr round 16 (radius: 5) [07:19:45 -6043.570184] SLOW spr round 17 (radius: 10) [07:20:40 -6043.569990] SLOW spr round 18 (radius: 15) [07:21:42 -6043.569862] SLOW spr round 19 (radius: 20) [07:22:50 -6043.559799] SLOW spr round 20 (radius: 25) [07:24:07 -6043.559724] Model parameter optimization (eps = 0.100000) [07:24:16] ML tree search #10, logLikelihood: -6043.082676 [07:24:16 -74886.661446] Initial branch length optimization [07:24:17 -57426.554406] Model parameter optimization (eps = 10.000000) [07:24:28 -57382.328867] AUTODETECT spr round 1 (radius: 5) [07:25:24 -28199.634994] AUTODETECT spr round 2 (radius: 10) [07:26:21 -18287.374976] AUTODETECT spr round 3 (radius: 15) [07:27:20 -11882.495105] AUTODETECT spr round 4 (radius: 20) [07:28:23 -9354.948486] AUTODETECT spr round 5 (radius: 25) [07:29:31 -8688.061702] SPR radius for FAST iterations: 25 (autodetect) [07:29:31 -8688.061702] Model parameter optimization (eps = 3.000000) [07:29:43 -8675.984289] FAST spr round 1 (radius: 25) [07:30:44 -6828.365162] FAST spr round 2 (radius: 25) [07:31:41 -6294.562666] FAST spr round 3 (radius: 25) [07:32:39 -6181.842976] FAST spr round 4 (radius: 25) [07:33:37 -6164.869287] FAST spr round 5 (radius: 25) [07:34:31 -6163.353460] FAST spr round 6 (radius: 25) [07:35:23 -6163.337615] Model parameter optimization (eps = 1.000000) [07:35:31 -6159.486254] SLOW spr round 1 (radius: 5) [07:36:22 -6158.021082] SLOW spr round 2 (radius: 5) [07:37:12 -6157.681287] SLOW spr round 3 (radius: 5) [07:38:01 -6157.680715] SLOW spr round 4 (radius: 10) [07:38:57 -6110.831266] SLOW spr round 5 (radius: 5) [07:39:51 -6109.477488] SLOW spr round 6 (radius: 5) [07:40:41 -6109.477458] SLOW spr round 7 (radius: 10) [07:41:38 -6106.608678] SLOW spr round 8 (radius: 5) [07:42:30 -6106.101298] SLOW spr round 9 (radius: 5) [07:43:21 -6105.865649] SLOW spr round 10 (radius: 5) [07:44:11 -6105.865054] SLOW spr round 11 (radius: 10) [07:45:05 -6105.864997] SLOW spr round 12 (radius: 15) [07:46:09 -5963.706062] SLOW spr round 13 (radius: 5) [07:47:05 -5953.091790] SLOW spr round 14 (radius: 5) [07:47:58 -5805.706040] SLOW spr round 15 (radius: 5) [07:48:50 -5792.810427] SLOW spr round 16 (radius: 5) [07:49:41 -5787.528588] SLOW spr round 17 (radius: 5) [07:50:31 -5787.491099] SLOW spr round 18 (radius: 10) [07:51:27 -5786.182134] SLOW spr round 19 (radius: 5) [07:52:20 -5786.181053] SLOW spr round 20 (radius: 10) [07:53:15 -5786.180479] SLOW spr round 21 (radius: 15) [07:54:18 -5786.180142] SLOW spr round 22 (radius: 20) [07:55:31 -5766.899401] SLOW spr round 23 (radius: 5) [07:56:28 -5766.832272] SLOW spr round 24 (radius: 10) [07:57:25 -5765.638804] SLOW spr round 25 (radius: 5) [07:58:17 -5765.637787] SLOW spr round 26 (radius: 10) [07:59:12 -5765.637280] SLOW spr round 27 (radius: 15) [08:00:14 -5765.301177] SLOW spr round 28 (radius: 5) [08:01:08 -5765.301016] SLOW spr round 29 (radius: 10) [08:02:05 -5765.300910] SLOW spr round 30 (radius: 15) [08:03:07 -5765.300844] SLOW spr round 31 (radius: 20) [08:04:21 -5765.300800] SLOW spr round 32 (radius: 25) [08:05:53 -5763.820864] SLOW spr round 33 (radius: 5) [08:06:50 -5745.085159] SLOW spr round 34 (radius: 5) [08:07:41 -5745.083957] SLOW spr round 35 (radius: 10) [08:08:36 -5745.083928] SLOW spr round 36 (radius: 15) [08:09:38 -5745.083924] SLOW spr round 37 (radius: 20) [08:10:53 -5745.083922] SLOW spr round 38 (radius: 25) [08:12:31 -5745.083921] Model parameter optimization (eps = 0.100000) [08:12:38] ML tree search #11, logLikelihood: -5744.500367 [08:12:38 -75753.993513] Initial branch length optimization [08:12:39 -58283.132252] Model parameter optimization (eps = 10.000000) [08:12:50 -58226.800732] AUTODETECT spr round 1 (radius: 5) [08:13:46 -26037.783699] AUTODETECT spr round 2 (radius: 10) [08:14:42 -15412.466506] AUTODETECT spr round 3 (radius: 15) [08:15:41 -11651.772638] AUTODETECT spr round 4 (radius: 20) [08:16:44 -9967.066712] AUTODETECT spr round 5 (radius: 25) [08:17:47 -9058.505170] SPR radius for FAST iterations: 25 (autodetect) [08:17:47 -9058.505170] Model parameter optimization (eps = 3.000000) [08:17:56 -9048.263531] FAST spr round 1 (radius: 25) [08:18:54 -6909.713896] FAST spr round 2 (radius: 25) [08:19:51 -6295.857528] FAST spr round 3 (radius: 25) [08:20:48 -6131.653929] FAST spr round 4 (radius: 25) [08:21:45 -6035.536267] FAST spr round 5 (radius: 25) [08:22:39 -6034.560929] FAST spr round 6 (radius: 25) [08:23:33 -6034.549895] Model parameter optimization (eps = 1.000000) [08:23:43 -6027.159438] SLOW spr round 1 (radius: 5) [08:24:35 -6026.716539] SLOW spr round 2 (radius: 5) [08:25:25 -6026.705379] SLOW spr round 3 (radius: 10) [08:26:21 -6021.108032] SLOW spr round 4 (radius: 5) [08:27:16 -6017.555706] SLOW spr round 5 (radius: 5) [08:28:08 -6017.532065] SLOW spr round 6 (radius: 10) [08:29:04 -6017.530732] SLOW spr round 7 (radius: 15) [08:30:06 -6006.698692] SLOW spr round 8 (radius: 5) [08:31:04 -5985.906783] SLOW spr round 9 (radius: 5) [08:31:56 -5985.905187] SLOW spr round 10 (radius: 10) [08:32:53 -5985.777743] SLOW spr round 11 (radius: 5) [08:33:49 -5985.777188] SLOW spr round 12 (radius: 10) [08:34:46 -5985.777091] SLOW spr round 13 (radius: 15) [08:35:49 -5985.777024] SLOW spr round 14 (radius: 20) [08:37:01 -5984.591479] SLOW spr round 15 (radius: 5) [08:38:00 -5984.590614] SLOW spr round 16 (radius: 10) [08:38:59 -5984.121106] SLOW spr round 17 (radius: 5) [08:39:54 -5984.120852] SLOW spr round 18 (radius: 10) [08:40:51 -5984.120777] SLOW spr round 19 (radius: 15) [08:41:54 -5984.120716] SLOW spr round 20 (radius: 20) [08:43:05 -5984.120659] SLOW spr round 21 (radius: 25) [08:44:26 -5984.120599] Model parameter optimization (eps = 0.100000) [08:44:32] ML tree search #12, logLikelihood: -5983.883254 [08:44:32 -75810.346009] Initial branch length optimization [08:44:33 -58501.252571] Model parameter optimization (eps = 10.000000) [08:44:46 -58440.505982] AUTODETECT spr round 1 (radius: 5) [08:45:42 -27021.656154] AUTODETECT spr round 2 (radius: 10) [08:46:38 -16846.661305] AUTODETECT spr round 3 (radius: 15) [08:47:37 -12329.203409] AUTODETECT spr round 4 (radius: 20) [08:48:43 -10013.285214] AUTODETECT spr round 5 (radius: 25) [08:49:55 -8886.194423] SPR radius for FAST iterations: 25 (autodetect) [08:49:55 -8886.194423] Model parameter optimization (eps = 3.000000) [08:50:05 -8866.075708] FAST spr round 1 (radius: 25) [08:51:09 -6895.178176] FAST spr round 2 (radius: 25) [08:52:06 -6763.491349] FAST spr round 3 (radius: 25) [08:53:00 -6745.023362] FAST spr round 4 (radius: 25) [08:53:54 -6734.956603] FAST spr round 5 (radius: 25) [08:54:45 -6734.953908] Model parameter optimization (eps = 1.000000) [08:54:53 -6733.065383] SLOW spr round 1 (radius: 5) [08:55:44 -6726.576256] SLOW spr round 2 (radius: 5) [08:56:35 -6726.256272] SLOW spr round 3 (radius: 5) [08:57:26 -6726.227547] SLOW spr round 4 (radius: 10) [08:58:21 -6724.921922] SLOW spr round 5 (radius: 5) [08:59:14 -6723.050968] SLOW spr round 6 (radius: 5) [09:00:05 -6723.027321] SLOW spr round 7 (radius: 10) [09:00:59 -6718.628927] SLOW spr round 8 (radius: 5) [09:01:53 -6716.887366] SLOW spr round 9 (radius: 5) [09:02:44 -6716.885809] SLOW spr round 10 (radius: 10) [09:03:38 -6715.977334] SLOW spr round 11 (radius: 5) [09:04:32 -6715.974167] SLOW spr round 12 (radius: 10) [09:05:27 -6714.929954] SLOW spr round 13 (radius: 5) [09:06:20 -6714.929930] SLOW spr round 14 (radius: 10) [09:07:13 -6714.929923] SLOW spr round 15 (radius: 15) [09:08:19 -6639.344523] SLOW spr round 16 (radius: 5) [09:09:16 -6549.018432] SLOW spr round 17 (radius: 5) [09:10:10 -6548.768059] SLOW spr round 18 (radius: 5) [09:11:00 -6548.767857] SLOW spr round 19 (radius: 10) [09:11:55 -6548.767813] SLOW spr round 20 (radius: 15) [09:13:04 -6291.807247] SLOW spr round 21 (radius: 5) [09:14:02 -5982.102575] SLOW spr round 22 (radius: 5) [09:14:55 -5959.635512] SLOW spr round 23 (radius: 5) [09:15:48 -5958.819565] SLOW spr round 24 (radius: 5) [09:16:40 -5958.162070] SLOW spr round 25 (radius: 5) [09:17:32 -5957.943659] SLOW spr round 26 (radius: 5) [09:18:24 -5957.943544] SLOW spr round 27 (radius: 10) [09:19:23 -5923.480325] SLOW spr round 28 (radius: 5) [09:20:18 -5868.058823] SLOW spr round 29 (radius: 5) [09:21:11 -5849.388410] SLOW spr round 30 (radius: 5) [09:22:04 -5849.343446] SLOW spr round 31 (radius: 10) [09:23:00 -5849.342251] SLOW spr round 32 (radius: 15) [09:24:06 -5834.343209] SLOW spr round 33 (radius: 5) [09:25:03 -5834.316193] SLOW spr round 34 (radius: 10) [09:26:01 -5833.590847] SLOW spr round 35 (radius: 5) [09:26:54 -5833.590701] SLOW spr round 36 (radius: 10) [09:27:49 -5833.590640] SLOW spr round 37 (radius: 15) [09:28:52 -5833.590582] SLOW spr round 38 (radius: 20) [09:30:08 -5773.730987] SLOW spr round 39 (radius: 5) [09:31:04 -5771.674415] SLOW spr round 40 (radius: 5) [09:31:55 -5771.673807] SLOW spr round 41 (radius: 10) [09:32:50 -5770.582472] SLOW spr round 42 (radius: 5) [09:33:41 -5770.582387] SLOW spr round 43 (radius: 10) [09:34:35 -5770.582323] SLOW spr round 44 (radius: 15) [09:35:37 -5769.255363] SLOW spr round 45 (radius: 5) [09:36:31 -5769.254862] SLOW spr round 46 (radius: 10) [09:37:25 -5769.254776] SLOW spr round 47 (radius: 15) [09:38:25 -5769.254717] SLOW spr round 48 (radius: 20) [09:39:33 -5768.326041] SLOW spr round 49 (radius: 5) [09:40:29 -5768.315133] SLOW spr round 50 (radius: 10) [09:41:26 -5768.315073] SLOW spr round 51 (radius: 15) [09:42:27 -5768.315016] SLOW spr round 52 (radius: 20) [09:43:36 -5768.314960] SLOW spr round 53 (radius: 25) [09:45:01 -5765.360580] SLOW spr round 54 (radius: 5) [09:45:58 -5762.722405] SLOW spr round 55 (radius: 5) [09:46:50 -5762.721640] SLOW spr round 56 (radius: 10) [09:47:46 -5762.721392] SLOW spr round 57 (radius: 15) [09:48:48 -5762.721278] SLOW spr round 58 (radius: 20) [09:49:58 -5762.721202] SLOW spr round 59 (radius: 25) [09:51:23 -5762.721137] Model parameter optimization (eps = 0.100000) [09:51:30] ML tree search #13, logLikelihood: -5761.741828 [09:51:30 -75960.403740] Initial branch length optimization [09:51:31 -57952.034286] Model parameter optimization (eps = 10.000000) [09:51:44 -57891.098108] AUTODETECT spr round 1 (radius: 5) [09:52:40 -26977.568305] AUTODETECT spr round 2 (radius: 10) [09:53:35 -16508.152678] AUTODETECT spr round 3 (radius: 15) [09:54:33 -11933.009345] AUTODETECT spr round 4 (radius: 20) [09:55:42 -9407.143785] AUTODETECT spr round 5 (radius: 25) [09:56:53 -8045.163856] SPR radius for FAST iterations: 25 (autodetect) [09:56:53 -8045.163856] Model parameter optimization (eps = 3.000000) [09:57:02 -8038.527924] FAST spr round 1 (radius: 25) [09:58:05 -6265.843418] FAST spr round 2 (radius: 25) [09:59:04 -6011.763463] FAST spr round 3 (radius: 25) [10:00:02 -6002.141161] FAST spr round 4 (radius: 25) [10:00:58 -6001.045335] FAST spr round 5 (radius: 25) [10:01:53 -6001.043773] Model parameter optimization (eps = 1.000000) [10:02:04 -5999.027155] SLOW spr round 1 (radius: 5) [10:02:56 -5993.561154] SLOW spr round 2 (radius: 5) [10:03:49 -5993.559683] SLOW spr round 3 (radius: 10) [10:04:46 -5993.558633] SLOW spr round 4 (radius: 15) [10:05:50 -5965.433874] SLOW spr round 5 (radius: 5) [10:06:46 -5945.586127] SLOW spr round 6 (radius: 5) [10:07:39 -5945.583623] SLOW spr round 7 (radius: 10) [10:08:36 -5945.583256] SLOW spr round 8 (radius: 15) [10:09:38 -5945.582888] SLOW spr round 9 (radius: 20) [10:10:47 -5941.469253] SLOW spr round 10 (radius: 5) [10:11:45 -5939.786182] SLOW spr round 11 (radius: 5) [10:12:38 -5939.785744] SLOW spr round 12 (radius: 10) [10:13:35 -5939.785546] SLOW spr round 13 (radius: 15) [10:14:37 -5937.944719] SLOW spr round 14 (radius: 5) [10:15:33 -5937.936006] SLOW spr round 15 (radius: 10) [10:16:31 -5937.933308] SLOW spr round 16 (radius: 15) [10:17:34 -5932.549835] SLOW spr round 17 (radius: 5) [10:18:30 -5932.224874] SLOW spr round 18 (radius: 5) [10:19:22 -5932.223208] SLOW spr round 19 (radius: 10) [10:20:19 -5932.222896] SLOW spr round 20 (radius: 15) [10:21:21 -5932.222766] SLOW spr round 21 (radius: 20) [10:22:33 -5932.182882] SLOW spr round 22 (radius: 25) [10:24:02 -5793.803043] SLOW spr round 23 (radius: 5) [10:25:02 -5771.078808] SLOW spr round 24 (radius: 5) [10:25:54 -5771.078142] SLOW spr round 25 (radius: 10) [10:26:49 -5771.078119] SLOW spr round 26 (radius: 15) [10:27:49 -5771.078118] SLOW spr round 27 (radius: 20) [10:28:56 -5771.078115] SLOW spr round 28 (radius: 25) [10:30:16 -5761.146573] SLOW spr round 29 (radius: 5) [10:31:12 -5761.146388] SLOW spr round 30 (radius: 10) [10:32:09 -5761.146379] SLOW spr round 31 (radius: 15) [10:33:09 -5761.146358] SLOW spr round 32 (radius: 20) [10:34:15 -5761.146358] SLOW spr round 33 (radius: 25) [10:35:34 -5761.146358] Model parameter optimization (eps = 0.100000) [10:35:42] ML tree search #14, logLikelihood: -5760.631499 [10:35:42 -74959.312108] Initial branch length optimization [10:35:43 -57263.458769] Model parameter optimization (eps = 10.000000) [10:35:58 -57178.878798] AUTODETECT spr round 1 (radius: 5) [10:36:54 -27541.064160] AUTODETECT spr round 2 (radius: 10) [10:37:50 -17420.128614] AUTODETECT spr round 3 (radius: 15) [10:38:49 -13328.043052] AUTODETECT spr round 4 (radius: 20) [10:39:55 -10934.780357] AUTODETECT spr round 5 (radius: 25) [10:41:00 -9878.838333] SPR radius for FAST iterations: 25 (autodetect) [10:41:00 -9878.838333] Model parameter optimization (eps = 3.000000) [10:41:10 -9870.681433] FAST spr round 1 (radius: 25) [10:42:11 -8173.676797] FAST spr round 2 (radius: 25) [10:43:08 -7886.158598] FAST spr round 3 (radius: 25) [10:44:05 -7740.387956] FAST spr round 4 (radius: 25) [10:45:02 -7719.997213] FAST spr round 5 (radius: 25) [10:45:56 -7719.997022] Model parameter optimization (eps = 1.000000) [10:46:08 -7717.667417] SLOW spr round 1 (radius: 5) [10:47:02 -7716.686460] SLOW spr round 2 (radius: 5) [10:47:54 -7716.674901] SLOW spr round 3 (radius: 10) [10:48:50 -7716.319062] SLOW spr round 4 (radius: 5) [10:49:46 -7696.853115] SLOW spr round 5 (radius: 5) [10:50:38 -7696.852845] SLOW spr round 6 (radius: 10) [10:51:35 -7696.852685] SLOW spr round 7 (radius: 15) [10:52:40 -7696.852542] SLOW spr round 8 (radius: 20) [10:53:53 -7573.785152] SLOW spr round 9 (radius: 5) [10:54:52 -7562.174746] SLOW spr round 10 (radius: 5) [10:55:44 -7562.174512] SLOW spr round 11 (radius: 10) [10:56:39 -7562.174292] SLOW spr round 12 (radius: 15) [10:57:44 -7324.047224] SLOW spr round 13 (radius: 5) [10:58:41 -7303.410527] SLOW spr round 14 (radius: 5) [10:59:33 -7303.407885] SLOW spr round 15 (radius: 10) [11:00:28 -7297.830284] SLOW spr round 16 (radius: 5) [11:01:22 -7296.687232] SLOW spr round 17 (radius: 5) [11:02:14 -7296.686606] SLOW spr round 18 (radius: 10) [11:03:08 -7296.686558] SLOW spr round 19 (radius: 15) [11:04:12 -7125.985117] SLOW spr round 20 (radius: 5) [11:05:10 -6952.661448] SLOW spr round 21 (radius: 5) [11:06:05 -6924.577992] SLOW spr round 22 (radius: 5) [11:06:55 -6924.562716] SLOW spr round 23 (radius: 10) [11:07:49 -6918.123234] SLOW spr round 24 (radius: 5) [11:08:42 -6918.123025] SLOW spr round 25 (radius: 10) [11:09:39 -6916.543459] SLOW spr round 26 (radius: 5) [11:10:34 -6916.047495] SLOW spr round 27 (radius: 5) [11:11:26 -6914.513941] SLOW spr round 28 (radius: 5) [11:12:17 -6913.474137] SLOW spr round 29 (radius: 5) [11:13:10 -6912.513544] SLOW spr round 30 (radius: 5) [11:14:00 -6912.513289] SLOW spr round 31 (radius: 10) [11:14:54 -6912.513057] SLOW spr round 32 (radius: 15) [11:15:56 -6898.481836] SLOW spr round 33 (radius: 5) [11:16:53 -6897.929937] SLOW spr round 34 (radius: 5) [11:17:44 -6897.927448] SLOW spr round 35 (radius: 10) [11:18:38 -6897.927448] SLOW spr round 36 (radius: 15) [11:19:40 -6897.927448] SLOW spr round 37 (radius: 20) [11:20:51 -6897.927446] SLOW spr round 38 (radius: 25) [11:22:08 -6897.596540] SLOW spr round 39 (radius: 5) [11:23:04 -6897.596530] SLOW spr round 40 (radius: 10) [11:24:01 -6897.596530] SLOW spr round 41 (radius: 15) [11:25:03 -6897.587464] SLOW spr round 42 (radius: 20) [11:26:13 -6897.586856] SLOW spr round 43 (radius: 25) [11:27:31 -6897.586243] Model parameter optimization (eps = 0.100000) [11:27:39] ML tree search #15, logLikelihood: -6896.598889 [11:27:39 -74789.748675] Initial branch length optimization [11:27:41 -57225.553055] Model parameter optimization (eps = 10.000000) [11:27:50 -57183.520250] AUTODETECT spr round 1 (radius: 5) [11:28:46 -26089.606141] AUTODETECT spr round 2 (radius: 10) [11:29:40 -15373.160998] AUTODETECT spr round 3 (radius: 15) [11:30:38 -10789.946498] AUTODETECT spr round 4 (radius: 20) [11:31:41 -9535.029657] AUTODETECT spr round 5 (radius: 25) [11:32:46 -8902.767251] SPR radius for FAST iterations: 25 (autodetect) [11:32:46 -8902.767251] Model parameter optimization (eps = 3.000000) [11:32:53 -8894.828217] FAST spr round 1 (radius: 25) [11:33:58 -6852.122405] FAST spr round 2 (radius: 25) [11:35:02 -6311.699227] FAST spr round 3 (radius: 25) [11:36:02 -6233.545758] FAST spr round 4 (radius: 25) [11:37:02 -6209.955404] FAST spr round 5 (radius: 25) [11:37:59 -6207.748325] FAST spr round 6 (radius: 25) [11:38:56 -6207.747791] Model parameter optimization (eps = 1.000000) [11:39:05 -6201.958122] SLOW spr round 1 (radius: 5) [11:39:59 -6200.312389] SLOW spr round 2 (radius: 5) [11:40:52 -6199.856021] SLOW spr round 3 (radius: 5) [11:41:46 -6199.843966] SLOW spr round 4 (radius: 10) [11:42:45 -6162.737395] SLOW spr round 5 (radius: 5) [11:43:42 -6161.969683] SLOW spr round 6 (radius: 5) [11:44:35 -6161.875896] SLOW spr round 7 (radius: 10) [11:45:33 -6161.867662] SLOW spr round 8 (radius: 15) [11:46:38 -6157.307119] SLOW spr round 9 (radius: 5) [11:47:37 -6155.555897] SLOW spr round 10 (radius: 5) [11:48:31 -6154.011075] SLOW spr round 11 (radius: 5) [11:49:24 -6154.009341] SLOW spr round 12 (radius: 10) [11:50:21 -6153.551188] SLOW spr round 13 (radius: 5) [11:51:16 -6153.551064] SLOW spr round 14 (radius: 10) [11:52:13 -6151.804632] SLOW spr round 15 (radius: 5) [11:53:09 -6151.804616] SLOW spr round 16 (radius: 10) [11:54:06 -6151.804616] SLOW spr round 17 (radius: 15) [11:55:10 -6151.804616] SLOW spr round 18 (radius: 20) [11:56:26 -6149.542366] SLOW spr round 19 (radius: 5) [11:57:25 -6149.542263] SLOW spr round 20 (radius: 10) [11:58:22 -6149.542262] SLOW spr round 21 (radius: 15) [11:59:27 -6149.542262] SLOW spr round 22 (radius: 20) [12:00:45 -6149.542262] SLOW spr round 23 (radius: 25) [12:02:17 -6096.582576] SLOW spr round 24 (radius: 5) [12:03:18 -6053.759798] SLOW spr round 25 (radius: 5) [12:04:12 -6053.642078] SLOW spr round 26 (radius: 5) [12:05:04 -6053.635305] SLOW spr round 27 (radius: 10) [12:06:01 -6045.042483] SLOW spr round 28 (radius: 5) [12:06:57 -6043.655128] SLOW spr round 29 (radius: 5) [12:07:49 -6043.654636] SLOW spr round 30 (radius: 10) [12:08:45 -6043.654151] SLOW spr round 31 (radius: 15) [12:09:49 -6043.653652] SLOW spr round 32 (radius: 20) [12:11:08 -6043.653139] SLOW spr round 33 (radius: 25) [12:12:38 -6043.652612] Model parameter optimization (eps = 0.100000) [12:12:45] ML tree search #16, logLikelihood: -6043.299908 [12:12:45 -75053.691435] Initial branch length optimization [12:12:47 -57931.930347] Model parameter optimization (eps = 10.000000) [12:12:56 -57881.374377] AUTODETECT spr round 1 (radius: 5) [12:13:54 -25213.039278] AUTODETECT spr round 2 (radius: 10) [12:14:51 -16163.761657] AUTODETECT spr round 3 (radius: 15) [12:15:53 -11997.102778] AUTODETECT spr round 4 (radius: 20) [12:17:00 -10705.738396] AUTODETECT spr round 5 (radius: 25) [12:18:08 -9721.812820] SPR radius for FAST iterations: 25 (autodetect) [12:18:08 -9721.812820] Model parameter optimization (eps = 3.000000) [12:18:20 -9708.808639] FAST spr round 1 (radius: 25) [12:19:27 -7744.242153] FAST spr round 2 (radius: 25) [12:20:25 -7207.384950] FAST spr round 3 (radius: 25) [12:21:23 -7120.338287] FAST spr round 4 (radius: 25) [12:22:18 -7116.797829] FAST spr round 5 (radius: 25) [12:23:13 -7115.779671] FAST spr round 6 (radius: 25) [12:24:07 -7115.232816] FAST spr round 7 (radius: 25) [12:25:02 -7115.231100] Model parameter optimization (eps = 1.000000) [12:25:11 -7113.608045] SLOW spr round 1 (radius: 5) [12:26:03 -7111.601081] SLOW spr round 2 (radius: 5) [12:26:57 -7111.598940] SLOW spr round 3 (radius: 10) [12:27:54 -7111.583865] SLOW spr round 4 (radius: 15) [12:29:03 -7107.967522] SLOW spr round 5 (radius: 5) [12:30:03 -7104.266292] SLOW spr round 6 (radius: 5) [12:30:58 -7101.946074] SLOW spr round 7 (radius: 5) [12:31:52 -7101.136632] SLOW spr round 8 (radius: 5) [12:32:44 -7101.136582] SLOW spr round 9 (radius: 10) [12:33:42 -7099.090965] SLOW spr round 10 (radius: 5) [12:34:37 -7098.760498] SLOW spr round 11 (radius: 5) [12:35:29 -7098.759556] SLOW spr round 12 (radius: 10) [12:36:26 -7098.539151] SLOW spr round 13 (radius: 5) [12:37:21 -7098.537643] SLOW spr round 14 (radius: 10) [12:38:20 -7098.537535] SLOW spr round 15 (radius: 15) [12:39:29 -7097.823119] SLOW spr round 16 (radius: 5) [12:40:27 -7097.822814] SLOW spr round 17 (radius: 10) [12:41:26 -7097.822804] SLOW spr round 18 (radius: 15) [12:42:33 -7097.589769] SLOW spr round 19 (radius: 5) [12:43:31 -7097.589687] SLOW spr round 20 (radius: 10) [12:44:30 -7097.589687] SLOW spr round 21 (radius: 15) [12:45:37 -7097.589686] SLOW spr round 22 (radius: 20) [12:46:57 -7065.318564] SLOW spr round 23 (radius: 5) [12:47:58 -7006.343265] SLOW spr round 24 (radius: 5) [12:48:55 -6981.282879] SLOW spr round 25 (radius: 5) [12:49:49 -6974.273073] SLOW spr round 26 (radius: 5) [12:50:42 -6974.270127] SLOW spr round 27 (radius: 10) [12:51:40 -6973.159260] SLOW spr round 28 (radius: 5) [12:52:36 -6973.158955] SLOW spr round 29 (radius: 10) [12:53:33 -6973.158910] SLOW spr round 30 (radius: 15) [12:54:41 -6915.641630] SLOW spr round 31 (radius: 5) [12:55:41 -6905.568819] SLOW spr round 32 (radius: 5) [12:56:36 -6905.562705] SLOW spr round 33 (radius: 10) [12:57:34 -6905.561037] SLOW spr round 34 (radius: 15) [12:58:40 -6905.560365] SLOW spr round 35 (radius: 20) [12:59:57 -6905.560082] SLOW spr round 36 (radius: 25) [13:01:25 -6758.416356] SLOW spr round 37 (radius: 5) [13:02:27 -6741.787453] SLOW spr round 38 (radius: 5) [13:03:23 -6729.532121] SLOW spr round 39 (radius: 5) [13:04:18 -6725.183153] SLOW spr round 40 (radius: 5) [13:05:11 -6725.104881] SLOW spr round 41 (radius: 10) [13:06:08 -6724.987031] SLOW spr round 42 (radius: 5) [13:07:04 -6724.984116] SLOW spr round 43 (radius: 10) [13:08:01 -6724.982630] SLOW spr round 44 (radius: 15) [13:09:07 -6724.491471] SLOW spr round 45 (radius: 5) [13:10:05 -6724.491010] SLOW spr round 46 (radius: 10) [13:11:03 -6724.490736] SLOW spr round 47 (radius: 15) [13:12:07 -6724.490567] SLOW spr round 48 (radius: 20) [13:13:24 -6650.697948] SLOW spr round 49 (radius: 5) [13:14:23 -6650.338782] SLOW spr round 50 (radius: 5) [13:15:16 -6650.338533] SLOW spr round 51 (radius: 10) [13:16:13 -6636.218597] SLOW spr round 52 (radius: 5) [13:17:09 -6625.924018] SLOW spr round 53 (radius: 5) [13:18:01 -6625.923407] SLOW spr round 54 (radius: 10) [13:18:58 -6625.923194] SLOW spr round 55 (radius: 15) [13:20:08 -6465.764048] SLOW spr round 56 (radius: 5) [13:21:10 -6010.424450] SLOW spr round 57 (radius: 5) [13:22:04 -5901.170646] SLOW spr round 58 (radius: 5) [13:22:58 -5790.013397] SLOW spr round 59 (radius: 5) [13:23:51 -5782.981418] SLOW spr round 60 (radius: 5) [13:24:44 -5772.258204] SLOW spr round 61 (radius: 5) [13:25:37 -5771.785932] SLOW spr round 62 (radius: 5) [13:26:28 -5766.267005] SLOW spr round 63 (radius: 5) [13:27:19 -5766.266985] SLOW spr round 64 (radius: 10) [13:28:16 -5766.262879] SLOW spr round 65 (radius: 15) [13:29:21 -5763.234434] SLOW spr round 66 (radius: 5) [13:30:18 -5762.368446] SLOW spr round 67 (radius: 5) [13:31:11 -5762.298440] SLOW spr round 68 (radius: 10) [13:32:07 -5762.297652] SLOW spr round 69 (radius: 15) [13:33:11 -5761.824616] SLOW spr round 70 (radius: 5) [13:34:08 -5761.824611] SLOW spr round 71 (radius: 10) [13:35:05 -5761.824609] SLOW spr round 72 (radius: 15) [13:36:09 -5761.824609] SLOW spr round 73 (radius: 20) [13:37:27 -5759.119959] SLOW spr round 74 (radius: 5) [13:38:24 -5759.119903] SLOW spr round 75 (radius: 10) [13:39:23 -5756.412336] SLOW spr round 76 (radius: 5) [13:40:16 -5756.412212] SLOW spr round 77 (radius: 10) [13:41:13 -5756.344229] SLOW spr round 78 (radius: 15) [13:42:18 -5756.343836] SLOW spr round 79 (radius: 20) [13:43:39 -5756.343833] SLOW spr round 80 (radius: 25) [13:45:15 -5756.343833] Model parameter optimization (eps = 0.100000) [13:45:22] ML tree search #17, logLikelihood: -5755.979883 [13:45:22 -75056.108910] Initial branch length optimization [13:45:23 -57093.380622] Model parameter optimization (eps = 10.000000) [13:45:38 -57061.306773] AUTODETECT spr round 1 (radius: 5) [13:46:37 -26307.140239] AUTODETECT spr round 2 (radius: 10) [13:47:34 -16067.983472] AUTODETECT spr round 3 (radius: 15) [13:48:35 -12295.479936] AUTODETECT spr round 4 (radius: 20) [13:49:41 -10307.448802] AUTODETECT spr round 5 (radius: 25) [13:50:53 -9304.361517] SPR radius for FAST iterations: 25 (autodetect) [13:50:53 -9304.361517] Model parameter optimization (eps = 3.000000) [13:51:04 -9296.495807] FAST spr round 1 (radius: 25) [13:52:10 -6639.141685] FAST spr round 2 (radius: 25) [13:53:12 -6340.106147] FAST spr round 3 (radius: 25) [13:54:12 -6147.335284] FAST spr round 4 (radius: 25) [13:55:12 -6124.805279] FAST spr round 5 (radius: 25) [13:56:10 -6118.307801] FAST spr round 6 (radius: 25) [13:57:07 -6118.307668] Model parameter optimization (eps = 1.000000) [13:57:16 -6115.962802] SLOW spr round 1 (radius: 5) [13:58:10 -6110.293540] SLOW spr round 2 (radius: 5) [13:59:05 -6106.818588] SLOW spr round 3 (radius: 5) [13:59:59 -6106.761805] SLOW spr round 4 (radius: 10) [14:01:00 -6066.734462] SLOW spr round 5 (radius: 5) [14:01:56 -6064.230352] SLOW spr round 6 (radius: 5) [14:02:49 -6064.228593] SLOW spr round 7 (radius: 10) [14:03:47 -6064.228280] SLOW spr round 8 (radius: 15) [14:04:52 -6002.266147] SLOW spr round 9 (radius: 5) [14:05:50 -5998.963556] SLOW spr round 10 (radius: 5) [14:06:43 -5998.963409] SLOW spr round 11 (radius: 10) [14:07:43 -5998.963292] SLOW spr round 12 (radius: 15) [14:08:48 -5998.963180] SLOW spr round 13 (radius: 20) [14:10:04 -5924.007008] SLOW spr round 14 (radius: 5) [14:11:03 -5900.323396] SLOW spr round 15 (radius: 5) [14:11:57 -5880.149719] SLOW spr round 16 (radius: 5) [14:12:50 -5880.102365] SLOW spr round 17 (radius: 10) [14:13:49 -5861.386437] SLOW spr round 18 (radius: 5) [14:14:43 -5861.386292] SLOW spr round 19 (radius: 10) [14:15:41 -5861.386225] SLOW spr round 20 (radius: 15) [14:16:47 -5860.891876] SLOW spr round 21 (radius: 5) [14:17:44 -5860.891480] SLOW spr round 22 (radius: 10) [14:18:43 -5860.885465] SLOW spr round 23 (radius: 15) [14:19:49 -5860.777914] SLOW spr round 24 (radius: 5) [14:20:46 -5860.777836] SLOW spr round 25 (radius: 10) [14:21:45 -5860.777775] SLOW spr round 26 (radius: 15) [14:22:52 -5860.777713] SLOW spr round 27 (radius: 20) [14:24:14 -5860.777652] SLOW spr round 28 (radius: 25) [14:25:50 -5810.116641] SLOW spr round 29 (radius: 5) [14:26:51 -5781.224520] SLOW spr round 30 (radius: 5) [14:27:46 -5781.216436] SLOW spr round 31 (radius: 10) [14:28:44 -5781.215822] SLOW spr round 32 (radius: 15) [14:29:52 -5780.553751] SLOW spr round 33 (radius: 5) [14:30:50 -5780.544610] SLOW spr round 34 (radius: 10) [14:31:49 -5780.544553] SLOW spr round 35 (radius: 15) [14:32:57 -5780.015261] SLOW spr round 36 (radius: 5) [14:33:55 -5779.777524] SLOW spr round 37 (radius: 5) [14:34:49 -5779.776410] SLOW spr round 38 (radius: 10) [14:35:48 -5779.775276] SLOW spr round 39 (radius: 15) [14:36:54 -5779.774113] SLOW spr round 40 (radius: 20) [14:38:17 -5779.521938] SLOW spr round 41 (radius: 5) [14:39:16 -5777.880812] SLOW spr round 42 (radius: 5) [14:40:10 -5777.835731] SLOW spr round 43 (radius: 10) [14:41:08 -5777.835673] SLOW spr round 44 (radius: 15) [14:42:16 -5777.835614] SLOW spr round 45 (radius: 20) [14:43:38 -5777.835556] SLOW spr round 46 (radius: 25) [14:45:16 -5777.835497] Model parameter optimization (eps = 0.100000) [14:45:24] ML tree search #18, logLikelihood: -5776.999459 [14:45:25 -74729.603550] Initial branch length optimization [14:45:26 -57188.150505] Model parameter optimization (eps = 10.000000) [14:45:35 -57136.761517] AUTODETECT spr round 1 (radius: 5) [14:46:34 -25651.054007] AUTODETECT spr round 2 (radius: 10) [14:47:31 -16584.716239] AUTODETECT spr round 3 (radius: 15) [14:48:31 -11643.130896] AUTODETECT spr round 4 (radius: 20) [14:49:40 -9496.708439] AUTODETECT spr round 5 (radius: 25) [14:50:58 -7872.608894] SPR radius for FAST iterations: 25 (autodetect) [14:50:58 -7872.608894] Model parameter optimization (eps = 3.000000) [14:51:08 -7854.477548] FAST spr round 1 (radius: 25) [14:52:11 -6229.433609] FAST spr round 2 (radius: 25) [14:53:10 -6077.075884] FAST spr round 3 (radius: 25) [14:54:09 -6059.255082] FAST spr round 4 (radius: 25) [14:55:06 -6056.062386] FAST spr round 5 (radius: 25) [14:56:01 -6055.470012] FAST spr round 6 (radius: 25) [14:56:58 -6055.402296] Model parameter optimization (eps = 1.000000) [14:57:07 -6053.174334] SLOW spr round 1 (radius: 5) [14:58:00 -6044.538685] SLOW spr round 2 (radius: 5) [14:58:53 -6044.537282] SLOW spr round 3 (radius: 10) [14:59:52 -6043.390757] SLOW spr round 4 (radius: 5) [15:00:48 -6036.813086] SLOW spr round 5 (radius: 5) [15:01:41 -6036.812852] SLOW spr round 6 (radius: 10) [15:02:39 -5992.735364] SLOW spr round 7 (radius: 5) [15:03:35 -5877.879131] SLOW spr round 8 (radius: 5) [15:04:29 -5842.286955] SLOW spr round 9 (radius: 5) [15:05:23 -5842.285846] SLOW spr round 10 (radius: 10) [15:06:22 -5842.285594] SLOW spr round 11 (radius: 15) [15:07:25 -5832.736100] SLOW spr round 12 (radius: 5) [15:08:23 -5826.150475] SLOW spr round 13 (radius: 5) [15:09:18 -5826.150305] SLOW spr round 14 (radius: 10) [15:10:17 -5826.150146] SLOW spr round 15 (radius: 15) [15:11:22 -5824.647338] SLOW spr round 16 (radius: 5) [15:12:21 -5824.643531] SLOW spr round 17 (radius: 10) [15:13:21 -5824.350663] SLOW spr round 18 (radius: 5) [15:14:18 -5824.350407] SLOW spr round 19 (radius: 10) [15:15:16 -5824.350304] SLOW spr round 20 (radius: 15) [15:16:20 -5822.951138] SLOW spr round 21 (radius: 5) [15:17:18 -5822.950453] SLOW spr round 22 (radius: 10) [15:18:18 -5822.950286] SLOW spr round 23 (radius: 15) [15:19:22 -5822.950162] SLOW spr round 24 (radius: 20) [15:20:31 -5819.425892] SLOW spr round 25 (radius: 5) [15:21:30 -5819.424788] SLOW spr round 26 (radius: 10) [15:22:31 -5819.424704] SLOW spr round 27 (radius: 15) [15:23:34 -5819.424623] SLOW spr round 28 (radius: 20) [15:24:40 -5819.424588] SLOW spr round 29 (radius: 25) [15:25:54 -5819.235646] SLOW spr round 30 (radius: 5) [15:26:53 -5819.235624] SLOW spr round 31 (radius: 10) [15:27:52 -5819.235605] SLOW spr round 32 (radius: 15) [15:28:53 -5819.235592] SLOW spr round 33 (radius: 20) [15:29:58 -5819.235587] SLOW spr round 34 (radius: 25) [15:31:12 -5817.937593] SLOW spr round 35 (radius: 5) [15:32:11 -5817.936374] SLOW spr round 36 (radius: 10) [15:33:11 -5817.936170] SLOW spr round 37 (radius: 15) [15:34:13 -5817.936134] SLOW spr round 38 (radius: 20) [15:35:18 -5817.936128] SLOW spr round 39 (radius: 25) [15:36:29 -5817.936127] Model parameter optimization (eps = 0.100000) [15:36:39] ML tree search #19, logLikelihood: -5817.368694 [15:36:39 -74848.864145] Initial branch length optimization [15:36:40 -57364.705351] Model parameter optimization (eps = 10.000000) [15:36:50 -57324.477020] AUTODETECT spr round 1 (radius: 5) [15:37:49 -25989.455860] AUTODETECT spr round 2 (radius: 10) [15:38:48 -15665.022324] AUTODETECT spr round 3 (radius: 15) [15:39:53 -11216.075852] AUTODETECT spr round 4 (radius: 20) [15:41:01 -8840.639726] AUTODETECT spr round 5 (radius: 25) [15:42:10 -8009.041109] SPR radius for FAST iterations: 25 (autodetect) [15:42:10 -8009.041109] Model parameter optimization (eps = 3.000000) [15:42:22 -7997.971516] FAST spr round 1 (radius: 25) [15:43:30 -6314.530675] FAST spr round 2 (radius: 25) [15:44:30 -6033.934747] FAST spr round 3 (radius: 25) [15:45:30 -5900.318459] FAST spr round 4 (radius: 25) [15:46:29 -5898.525762] FAST spr round 5 (radius: 25) [15:47:27 -5898.509947] Model parameter optimization (eps = 1.000000) [15:47:31 -5897.756457] SLOW spr round 1 (radius: 5) [15:48:26 -5897.409653] SLOW spr round 2 (radius: 5) [15:49:20 -5897.408618] SLOW spr round 3 (radius: 10) [15:50:20 -5880.894300] SLOW spr round 4 (radius: 5) [15:51:17 -5872.507247] SLOW spr round 5 (radius: 5) [15:52:10 -5872.506606] SLOW spr round 6 (radius: 10) [15:53:09 -5868.650713] SLOW spr round 7 (radius: 5) [15:54:05 -5868.650593] SLOW spr round 8 (radius: 10) [15:55:04 -5868.650544] SLOW spr round 9 (radius: 15) [15:56:09 -5858.797628] SLOW spr round 10 (radius: 5) [15:57:07 -5858.797605] SLOW spr round 11 (radius: 10) [15:58:06 -5857.591197] SLOW spr round 12 (radius: 5) [15:59:02 -5857.591076] SLOW spr round 13 (radius: 10) [16:00:00 -5857.591073] SLOW spr round 14 (radius: 15) [16:01:04 -5857.591070] SLOW spr round 15 (radius: 20) [16:02:16 -5853.220714] SLOW spr round 16 (radius: 5) [16:03:15 -5853.220708] SLOW spr round 17 (radius: 10) [16:04:14 -5853.220707] SLOW spr round 18 (radius: 15) [16:05:19 -5853.220706] SLOW spr round 19 (radius: 20) [16:06:31 -5853.220706] SLOW spr round 20 (radius: 25) [16:07:56 -5853.072506] SLOW spr round 21 (radius: 5) [16:08:55 -5853.072502] SLOW spr round 22 (radius: 10) [16:09:55 -5853.072502] SLOW spr round 23 (radius: 15) [16:10:59 -5853.072502] SLOW spr round 24 (radius: 20) [16:12:11 -5853.072502] SLOW spr round 25 (radius: 25) [16:13:36 -5853.072502] Model parameter optimization (eps = 0.100000) [16:13:43] ML tree search #20, logLikelihood: -5852.893227 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.285739,0.248719) (0.179081,0.382578) (0.373828,0.948703) (0.161352,3.134550) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -5744.500367 AIC score: 15195.000734 / AICc score: 6886119.000734 / BIC score: 18947.977417 Free parameters (model + branch lengths): 1853 WARNING: Number of free parameters (K=1853) is larger than alignment size (n=56). This might lead to overfitting and compromise tree inference results! WARNING: Best ML tree contains 720 near-zero branches! Best ML tree with collapsed near-zero branches saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1.raxml.bestTreeCollapsed Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C0A1/3_mltree/Q9C0A1.raxml.log Analysis started: 04-Jul-2021 03:09:04 / finished: 04-Jul-2021 19:22:48 Elapsed time: 58424.055 seconds Consumed energy: 4361.080 Wh (= 22 km in an electric car, or 109 km with an e-scooter!)