RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 17:54:37 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/2_msa/Q9C009_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/3_mltree/Q9C009.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/4_raxmlng_ancestral/Q9C009 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626101677 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/2_msa/Q9C009_nogap_msa.fasta [00:00:00] Loaded alignment with 1000 taxa and 403 sites WARNING: Sequences tr_B4QI21_B4QI21_DROSI_7240 and tr_B4I8C7_B4I8C7_DROSE_7238 are exactly identical! WARNING: Sequences tr_A0A1D5P6I4_A0A1D5P6I4_CHICK_9031 and tr_A0A226MS89_A0A226MS89_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5P6I4_A0A1D5P6I4_CHICK_9031 and tr_A0A226PFG2_A0A226PFG2_COLVI_9014 are exactly identical! WARNING: Sequences tr_M3XQ05_M3XQ05_MUSPF_9669 and tr_M3WGT1_M3WGT1_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YXU1_M3YXU1_MUSPF_9669 and tr_A0A2U3XEU1_A0A2U3XEU1_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G3QG51_G3QG51_GORGO_9595 and tr_A0A2R9AUY3_A0A2R9AUY3_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3R1I1_G3R1I1_GORGO_9595 and tr_A0A096NKI7_A0A096NKI7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3RF46_G3RF46_GORGO_9595 and tr_H2QBP0_H2QBP0_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RYD0_G3RYD0_GORGO_9595 and sp_Q9Y261_FOXA2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2NRP8_H2NRP8_PONAB_9601 and tr_A0A2K5LXJ0_A0A2K5LXJ0_CERAT_9531 are exactly identical! WARNING: Sequences tr_H2NRP8_H2NRP8_PONAB_9601 and tr_A0A2K6C7H7_A0A2K6C7H7_MACNE_9545 are exactly identical! WARNING: Sequences tr_H2P0P2_H2P0P2_PONAB_9601 and tr_H2QGM2_H2QGM2_PANTR_9598 are exactly identical! WARNING: Sequences tr_H2P0P2_H2P0P2_PONAB_9601 and sp_P55318_FOXA3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q28X48_Q28X48_DROPS_46245 and tr_B4H512_B4H512_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A2I3RDC3_A0A2I3RDC3_PANTR_9598 and sp_P55317_FOXA1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2Q2R9_H2Q2R9_PANTR_9598 and tr_A0A2R9BTX1_A0A2R9BTX1_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QK56_H2QK56_PANTR_9598 and tr_A0A2R9ARS5_A0A2R9ARS5_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QRZ5_H2QRZ5_PANTR_9598 and tr_A0A2R8ZMY1_A0A2R8ZMY1_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2R7P3_H2R7P3_PANTR_9598 and tr_A0A0D9R4B6_A0A0D9R4B6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A158ND79_A0A158ND79_ATTCE_12957 and tr_A0A195B0R2_A0A195B0R2_9HYME_520822 are exactly identical! WARNING: Sequences sp_A8MTJ6_FOXI3_HUMAN_9606 and tr_A0A0D9RV20_A0A0D9RV20_CHLSB_60711 are exactly identical! WARNING: Sequences sp_A8MTJ6_FOXI3_HUMAN_9606 and tr_A0A2K5LFZ4_A0A2K5LFZ4_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5RI96_A0A1D5RI96_MACMU_9544 and tr_A0A2K6D0W0_A0A2K6D0W0_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6Q3J5_F6Q3J5_MACMU_9544 and tr_A0A2I3NEP0_A0A2I3NEP0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6Q3J5_F6Q3J5_MACMU_9544 and tr_A0A0D9S242_A0A0D9S242_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F6Q3J5_F6Q3J5_MACMU_9544 and tr_A0A2K5Z9S7_A0A2K5Z9S7_MANLE_9568 are exactly identical! WARNING: Sequences tr_F6YQ64_F6YQ64_MACMU_9544 and tr_A0A096NUN4_A0A096NUN4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6YQ64_F6YQ64_MACMU_9544 and tr_A0A0D9RSE6_A0A0D9RSE6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F6YQ64_F6YQ64_MACMU_9544 and tr_A0A2K6CVT5_A0A2K6CVT5_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7D2T8_F7D2T8_MACMU_9544 and tr_A0A096MMP8_A0A096MMP8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7D2T8_F7D2T8_MACMU_9544 and tr_A0A0D9RF89_A0A0D9RF89_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7D2T8_F7D2T8_MACMU_9544 and tr_A0A2K5M2A1_A0A2K5M2A1_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7D2T8_F7D2T8_MACMU_9544 and tr_A0A2K6ATQ4_A0A2K6ATQ4_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7D2T8_F7D2T8_MACMU_9544 and tr_A0A2K5YA79_A0A2K5YA79_MANLE_9568 are exactly identical! WARNING: Sequences tr_E5SNE3_E5SNE3_TRISP_6334 and tr_A0A0V0VXB8_A0A0V0VXB8_9BILA_181606 are exactly identical! WARNING: Sequences tr_E3LFC3_E3LFC3_CAERE_31234 and tr_A0A260Z9B0_A0A260Z9B0_9PELO_1503980 are exactly identical! WARNING: Sequences tr_A0A2I3MWV6_A0A2I3MWV6_PAPAN_9555 and tr_A0A2K5MTE7_A0A2K5MTE7_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3MWV6_A0A2I3MWV6_PAPAN_9555 and tr_A0A2K6AY68_A0A2K6AY68_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I3MWV6_A0A2I3MWV6_PAPAN_9555 and tr_A0A2K5YK08_A0A2K5YK08_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A091EBU0_A0A091EBU0_CORBR_85066 and tr_A0A093QDW4_A0A093QDW4_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A091EBU0_A0A091EBU0_CORBR_85066 and tr_A0A091GA95_A0A091GA95_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A091VHA2_A0A091VHA2_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A087REH7_A0A087REH7_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A093H7J9_A0A093H7J9_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A091WEI1_A0A091WEI1_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A099Z6V4_A0A099Z6V4_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A0A0A5B6_A0A0A0A5B6_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A093GHH4_A0A093GHH4_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091IK37_A0A091IK37_EGRGA_188379 and tr_A0A091IYN4_A0A091IYN4_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091J102_A0A091J102_EGRGA_188379 and tr_A0A091G702_A0A091G702_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091J102_A0A091J102_EGRGA_188379 and tr_A0A091IFM1_A0A091IFM1_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A194RKV3_A0A194RKV3_PAPMA_76193 and tr_A0A194QDB4_A0A194QDB4_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A093QC01_A0A093QC01_9PASS_328815 and tr_A0A091FLN2_A0A091FLN2_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A093QC01_A0A093QC01_9PASS_328815 and tr_A0A093GSU3_A0A093GSU3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091USI2_A0A091USI2_NIPNI_128390 and tr_A0A087QY64_A0A087QY64_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091W007_A0A091W007_NIPNI_128390 and tr_A0A093HII6_A0A093HII6_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A091W007_A0A091W007_NIPNI_128390 and tr_A0A091VBJ0_A0A091VBJ0_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091W007_A0A091W007_NIPNI_128390 and tr_A0A0A0APC4_A0A0A0APC4_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A0V1CIE7_A0A0V1CIE7_TRIBR_45882 and tr_A0A0V0WXU4_A0A0V0WXU4_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V1CIE7_A0A0V1CIE7_TRIBR_45882 and tr_A0A0V0ZXJ4_A0A0V0ZXJ4_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V1CIE7_A0A0V1CIE7_TRIBR_45882 and tr_A0A0V1NSS3_A0A0V1NSS3_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1CIE7_A0A0V1CIE7_TRIBR_45882 and tr_A0A0V0U6A9_A0A0V0U6A9_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3PU35_A0A1S3PU35_SALSA_8030 and tr_A0A060XXW5_A0A060XXW5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A226MVA8_A0A226MVA8_CALSU_9009 and tr_A0A226PGX1_A0A226PGX1_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226NHD2_A0A226NHD2_CALSU_9009 and tr_A0A226PX10_A0A226PX10_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2U3UZH3_A0A2U3UZH3_TURTR_9739 and tr_A0A2Y9NUL6_A0A2Y9NUL6_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U3V8N5_A0A2U3V8N5_TURTR_9739 and tr_A0A2Y9SCQ3_A0A2Y9SCQ3_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U3V8N5_A0A2U3V8N5_TURTR_9739 and tr_A0A383ZTB3_A0A383ZTB3_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2U4AQS4_A0A2U4AQS4_TURTR_9739 and tr_A0A2Y9PSS8_A0A2Y9PSS8_DELLE_9749 are exactly identical! WARNING: Duplicate sequences found: 69 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/4_raxmlng_ancestral/Q9C009.raxml.reduced.phy Alignment comprises 1 partitions and 403 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 403 Gaps: 47.83 % Invariant sites: 2.23 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/4_raxmlng_ancestral/Q9C009.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/3_mltree/Q9C009.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 101 / 8080 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -242680.687951 [00:00:00 -242680.687951] Initial branch length optimization [00:00:01 -130693.714882] Model parameter optimization (eps = 0.100000) [00:00:36] Tree #1, final logLikelihood: -130324.271870 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.129769,0.050257) (0.091184,0.073954) (0.159206,0.601748) (0.619840,1.437359) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/4_raxmlng_ancestral/Q9C009.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/4_raxmlng_ancestral/Q9C009.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/4_raxmlng_ancestral/Q9C009.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q9C009/4_raxmlng_ancestral/Q9C009.raxml.log Analysis started: 12-Jul-2021 17:54:37 / finished: 12-Jul-2021 17:55:17 Elapsed time: 40.158 seconds Consumed energy: 2.952 Wh