RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 02-Jun-2021 18:18:51 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/2_msa/Q9BRR0_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/3_mltree/Q9BRR0.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/4_raxmlng_ancestral/Q9BRR0 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622647131 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/2_msa/Q9BRR0_nogap_msa.fasta [00:00:00] Loaded alignment with 997 taxa and 538 sites WARNING: Sequences tr_M3YWT0_M3YWT0_MUSPF_9669 and tr_A0A2U3Y1N2_A0A2U3Y1N2_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YWT0_M3YWT0_MUSPF_9669 and tr_A0A2Y9KFZ4_A0A2Y9KFZ4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2I2Z5M2_A0A2I2Z5M2_GORGO_9595 and tr_A0A2J8SJ28_A0A2J8SJ28_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I2Z5M2_A0A2I2Z5M2_GORGO_9595 and sp_Q9C0F3_ZN436_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2ZTG0_A0A2I2ZTG0_GORGO_9595 and sp_P17036_ZNF3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QQX3_G3QQX3_GORGO_9595 and tr_H2QV13_H2QV13_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QQX3_G3QQX3_GORGO_9595 and sp_P17029_ZKSC1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QQX3_G3QQX3_GORGO_9595 and tr_A0A2R9BHM6_A0A2R9BHM6_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3R736_G3R736_GORGO_9595 and sp_Q9Y5A6_ZSC21_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3R736_G3R736_GORGO_9595 and sp_A1YG26_ZSC21_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2NPG5_H2NPG5_PONAB_9601 and sp_Q5RCD9_ZSCA2_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I3SXN0_A0A2I3SXN0_PANTR_9598 and tr_A0A2R8ZPX2_A0A2R8ZPX2_PANPA_9597 are exactly identical! WARNING: Sequences sp_A2T736_ZKSC8_PANTR_9598 and sp_A1YG60_ZKSC8_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2R0W5_H2R0W5_PANTR_9598 and tr_A0A2R9BGK0_A0A2R9BGK0_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2RAR5_H2RAR5_PANTR_9598 and tr_A0A2R9C947_A0A2R9C947_PANPA_9597 are exactly identical! WARNING: Sequences tr_K7AAB1_K7AAB1_PANTR_9598 and sp_Q8NF99_ZN397_HUMAN_9606 are exactly identical! WARNING: Sequences tr_K7AAB1_K7AAB1_PANTR_9598 and tr_A0A2R9C8P1_A0A2R9C8P1_PANPA_9597 are exactly identical! WARNING: Sequences tr_K7B2U8_K7B2U8_PANTR_9598 and sp_Q9HBT7_ZN287_HUMAN_9606 are exactly identical! WARNING: Sequences tr_K7B2U8_K7B2U8_PANTR_9598 and tr_A0A2R9AXM9_A0A2R9AXM9_PANPA_9597 are exactly identical! WARNING: Sequences tr_W5PCH7_W5PCH7_SHEEP_9940 and tr_E1BMZ4_E1BMZ4_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A1D5Q7E3_A0A1D5Q7E3_MACMU_9544 and tr_A0A2K6BFA3_A0A2K6BFA3_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5RBE7_A0A1D5RBE7_MACMU_9544 and tr_A0A2K6BLS3_A0A2K6BLS3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6UAQ9_F6UAQ9_MACMU_9544 and tr_G7P0C1_G7P0C1_MACFA_9541 are exactly identical! WARNING: Sequences tr_F6UAQ9_F6UAQ9_MACMU_9544 and tr_A0A096MV28_A0A096MV28_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6UAQ9_F6UAQ9_MACMU_9544 and tr_A0A2K5N6W7_A0A2K5N6W7_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6UAQ9_F6UAQ9_MACMU_9544 and tr_A0A2K5YUJ0_A0A2K5YUJ0_MANLE_9568 are exactly identical! WARNING: Sequences tr_F6VCW6_F6VCW6_MACMU_9544 and tr_A0A2K6C3Z4_A0A2K6C3Z4_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7AE32_F7AE32_MACMU_9544 and tr_A0A2K6AP59_A0A2K6AP59_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7AE32_F7AE32_MACMU_9544 and tr_A0A2K5ZR07_A0A2K5ZR07_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7CE19_F7CE19_MACMU_9544 and tr_G7P0C2_G7P0C2_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7CE19_F7CE19_MACMU_9544 and tr_A0A2K5N104_A0A2K5N104_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7CE19_F7CE19_MACMU_9544 and tr_A0A2K6BHE4_A0A2K6BHE4_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7CE19_F7CE19_MACMU_9544 and tr_A0A2K5YV40_A0A2K5YV40_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_G7P3S3_G7P3S3_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A096NLJ7_A0A096NLJ7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A2K5M129_A0A2K5M129_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A2K6DJK3_A0A2K6DJK3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A2K6A186_A0A2K6A186_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7GDG2_F7GDG2_MACMU_9544 and tr_A0A096MVU8_A0A096MVU8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7GDG2_F7GDG2_MACMU_9544 and tr_A0A0D9S896_A0A0D9S896_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7GDG2_F7GDG2_MACMU_9544 and tr_A0A2K5LPR7_A0A2K5LPR7_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7GDG2_F7GDG2_MACMU_9544 and tr_A0A2K6BKJ1_A0A2K6BKJ1_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HIK4_F7HIK4_MACMU_9544 and tr_G8F2T6_G8F2T6_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A287AY13_A0A287AY13_PIG_9823 and tr_A0A2Y9LKY1_A0A2Y9LKY1_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A287AY13_A0A287AY13_PIG_9823 and tr_A0A383ZJ36_A0A383ZJ36_BALAS_310752 are exactly identical! WARNING: Sequences tr_G1L1C1_G1L1C1_AILME_9646 and tr_A0A384DGZ4_A0A384DGZ4_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1LSL0_G1LSL0_AILME_9646 and tr_A0A384CDE3_A0A384CDE3_URSMA_29073 are exactly identical! WARNING: Sequences tr_G7P0B0_G7P0B0_MACFA_9541 and tr_A0A2K6CU16_A0A2K6CU16_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7P0C3_G7P0C3_MACFA_9541 and tr_A0A096MQ78_A0A096MQ78_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7P0C3_G7P0C3_MACFA_9541 and tr_A0A2K6DHH7_A0A2K6DHH7_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7P0C3_G7P0C3_MACFA_9541 and tr_A0A2K5ZGD5_A0A2K5ZGD5_MANLE_9568 are exactly identical! WARNING: Sequences tr_G7PRT6_G7PRT6_MACFA_9541 and tr_A0A2K5KKJ7_A0A2K5KKJ7_CERAT_9531 are exactly identical! WARNING: Sequences tr_G7PRT6_G7PRT6_MACFA_9541 and tr_A0A2K6E2Z0_A0A2K6E2Z0_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7PRT6_G7PRT6_MACFA_9541 and tr_A0A2K5YQK9_A0A2K5YQK9_MANLE_9568 are exactly identical! WARNING: Sequences tr_G8F2T8_G8F2T8_MACFA_9541 and tr_A0A096NDF2_A0A096NDF2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G8F2T8_G8F2T8_MACFA_9541 and tr_A0A2K5L4M7_A0A2K5L4M7_CERAT_9531 are exactly identical! WARNING: Sequences tr_G8F2T8_G8F2T8_MACFA_9541 and tr_A0A2K6DKS1_A0A2K6DKS1_MACNE_9545 are exactly identical! WARNING: Sequences tr_G8F2T8_G8F2T8_MACFA_9541 and tr_A0A2K5ZXT3_A0A2K5ZXT3_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A096P2Z9_A0A096P2Z9_PAPAN_9555 and tr_A0A2K5YJY5_A0A2K5YJY5_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2K5KPB6_A0A2K5KPB6_CERAT_9531 and tr_A0A2K5XE61_A0A2K5XE61_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2K5LAJ0_A0A2K5LAJ0_CERAT_9531 and tr_A0A2K5Y6G8_A0A2K5Y6G8_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2K5N265_A0A2K5N265_CERAT_9531 and tr_A0A2K6EBM2_A0A2K6EBM2_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2U4CA67_A0A2U4CA67_TURTR_9739 and tr_A0A2U4CA79_A0A2U4CA79_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A2Y9PC28_A0A2Y9PC28_DELLE_9749 and tr_A0A2Y9F072_A0A2Y9F072_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 64 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/4_raxmlng_ancestral/Q9BRR0.raxml.reduced.phy Alignment comprises 1 partitions and 538 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 538 Gaps: 29.59 % Invariant sites: 1.12 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/4_raxmlng_ancestral/Q9BRR0.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/3_mltree/Q9BRR0.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 135 / 10800 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -232807.183226 [00:00:00 -232807.183226] Initial branch length optimization [00:00:02 -168471.533111] Model parameter optimization (eps = 0.100000) [00:00:38] Tree #1, final logLikelihood: -168135.875211 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.113163,0.180821) (0.116330,0.747206) (0.301021,0.568892) (0.469487,1.536501) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/4_raxmlng_ancestral/Q9BRR0.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/4_raxmlng_ancestral/Q9BRR0.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/4_raxmlng_ancestral/Q9BRR0.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q9BRR0/4_raxmlng_ancestral/Q9BRR0.raxml.log Analysis started: 02-Jun-2021 18:18:51 / finished: 02-Jun-2021 18:19:35 Elapsed time: 43.492 seconds Consumed energy: 3.279 Wh