RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 18:18:46 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/2_msa/Q96P09_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/3_mltree/Q96P09.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/4_raxmlng_ancestral/Q96P09 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626103126 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/2_msa/Q96P09_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 236 sites WARNING: Fully undetermined sequences found: 2 WARNING: Sequences tr_B4QVT1_B4QVT1_DROSI_7240 and tr_Q9VEM2_Q9VEM2_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QVT1_B4QVT1_DROSI_7240 and tr_B4IBK6_B4IBK6_DROSE_7238 are exactly identical! WARNING: Sequences tr_M3XSP4_M3XSP4_MUSPF_9669 and tr_A0A2Y9KUG4_A0A2Y9KUG4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y224_M3Y224_MUSPF_9669 and tr_A0A2Y9KWH7_A0A2Y9KWH7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G3QNH3_G3QNH3_GORGO_9595 and tr_K7ETI7_K7ETI7_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QNH3_G3QNH3_GORGO_9595 and tr_H2QCP1_H2QCP1_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QNH3_G3QNH3_GORGO_9595 and sp_Q8WZ73_RFFL_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QNH3_G3QNH3_GORGO_9595 and tr_A0A2R9AAH6_A0A2R9AAH6_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QZ38_G3QZ38_GORGO_9595 and tr_H2Q4M6_H2Q4M6_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QZ38_G3QZ38_GORGO_9595 and sp_Q13490_BIRC2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QZ38_G3QZ38_GORGO_9595 and tr_A0A2R8Z7Y7_A0A2R8Z7Y7_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RB95_G3RB95_GORGO_9595 and tr_H2PHZ8_H2PHZ8_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q28XZ5_Q28XZ5_DROPS_46245 and tr_B4GGC2_B4GGC2_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A2J8L0U1_A0A2J8L0U1_PANTR_9598 and tr_A0A2R9C0Y4_A0A2R9C0Y4_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2R0D4_H2R0D4_PANTR_9598 and sp_Q8WY64_MYLIP_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2R0D4_H2R0D4_PANTR_9598 and tr_A0A2R8ZC89_A0A2R8ZC89_PANPA_9597 are exactly identical! WARNING: Sequences tr_K7D8W8_K7D8W8_PANTR_9598 and tr_A0A2R9A858_A0A2R9A858_PANPA_9597 are exactly identical! WARNING: Sequences tr_M4A8R3_M4A8R3_XIPMA_8083 and tr_A0A096LQR5_A0A096LQR5_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A088A7X5_A0A088A7X5_APIME_7460 and tr_A0A2A3EQ87_A0A2A3EQ87_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A088AMZ3_A0A088AMZ3_APIME_7460 and tr_A0A2A3EE26_A0A2A3EE26_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NKP4_A0A158NKP4_ATTCE_12957 and tr_A0A151WRQ9_A0A151WRQ9_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NKP4_A0A158NKP4_ATTCE_12957 and tr_A0A195DG35_A0A195DG35_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NKP4_A0A158NKP4_ATTCE_12957 and tr_A0A195BLW9_A0A195BLW9_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NRR2_A0A158NRR2_ATTCE_12957 and tr_A0A195BQ09_A0A195BQ09_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NYI2_A0A158NYI2_ATTCE_12957 and tr_F4WSZ9_F4WSZ9_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NYI2_A0A158NYI2_ATTCE_12957 and tr_A0A151IT59_A0A151IT59_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NYI2_A0A158NYI2_ATTCE_12957 and tr_A0A195AYJ3_A0A195AYJ3_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NYI2_A0A158NYI2_ATTCE_12957 and tr_A0A195F6W3_A0A195F6W3_9HYME_34720 are exactly identical! WARNING: Sequences tr_K1QAX5_K1QAX5_CRAGI_29159 and tr_K1R0E3_K1R0E3_CRAGI_29159 are exactly identical! WARNING: Sequences tr_A0A1D5Q1U6_A0A1D5Q1U6_MACMU_9544 and tr_G7P7P1_G7P7P1_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5R358_A0A1D5R358_MACMU_9544 and tr_G7PU30_G7PU30_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7FEI6_F7FEI6_MACMU_9544 and tr_A0A0D9S1T4_A0A0D9S1T4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7HHH8_F7HHH8_MACMU_9544 and tr_A0A0D9RUQ1_A0A0D9RUQ1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H9ES76_H9ES76_MACMU_9544 and tr_G7P4H0_G7P4H0_MACFA_9541 are exactly identical! WARNING: Sequences tr_H9ES76_H9ES76_MACMU_9544 and tr_A0A096NL29_A0A096NL29_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H9ES76_H9ES76_MACMU_9544 and tr_A0A0D9R5F6_A0A0D9R5F6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H9ES76_H9ES76_MACMU_9544 and tr_A0A2K5NU78_A0A2K5NU78_CERAT_9531 are exactly identical! WARNING: Sequences tr_H9ES76_H9ES76_MACMU_9544 and tr_A0A2K6DG22_A0A2K6DG22_MACNE_9545 are exactly identical! WARNING: Sequences tr_H9ES76_H9ES76_MACMU_9544 and tr_A0A2K5XX19_A0A2K5XX19_MANLE_9568 are exactly identical! WARNING: Sequences tr_H9FTU3_H9FTU3_MACMU_9544 and tr_A0A096NAP9_A0A096NAP9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H9FTU3_H9FTU3_MACMU_9544 and tr_A0A0D9S0F4_A0A0D9S0F4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H9FTU3_H9FTU3_MACMU_9544 and tr_A0A2K5LDZ2_A0A2K5LDZ2_CERAT_9531 are exactly identical! WARNING: Sequences tr_X1WK77_X1WK77_ACYPI_7029 and tr_X1WZI0_X1WZI0_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WK77_X1WK77_ACYPI_7029 and tr_X1XGA4_X1XGA4_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WKE1_X1WKE1_ACYPI_7029 and tr_X1WTE7_X1WTE7_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WKE1_X1WKE1_ACYPI_7029 and tr_X1X7F0_X1X7F0_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WKE1_X1WKE1_ACYPI_7029 and tr_X1XAK7_X1XAK7_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WKE1_X1WKE1_ACYPI_7029 and tr_X1XJN5_X1XJN5_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WKE1_X1WKE1_ACYPI_7029 and tr_X1XP01_X1XP01_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WMK2_X1WMK2_ACYPI_7029 and tr_X1WY03_X1WY03_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WMK2_X1WMK2_ACYPI_7029 and tr_X1X011_X1X011_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1WMK2_X1WMK2_ACYPI_7029 and tr_X1X5J9_X1X5J9_ACYPI_7029 are exactly identical! WARNING: Sequences tr_X1XHC9_X1XHC9_ACYPI_7029 and tr_X1XTA2_X1XTA2_ACYPI_7029 are exactly identical! WARNING: Sequences tr_G7PNJ6_G7PNJ6_MACFA_9541 and tr_A0A096NYE4_A0A096NYE4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7PNJ6_G7PNJ6_MACFA_9541 and tr_A0A2K5L6K9_A0A2K5L6K9_CERAT_9531 are exactly identical! WARNING: Sequences tr_G7PNJ6_G7PNJ6_MACFA_9541 and tr_A0A2K6DEC5_A0A2K6DEC5_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7PNJ6_G7PNJ6_MACFA_9541 and tr_A0A2K6A571_A0A2K6A571_MANLE_9568 are exactly identical! WARNING: Sequences tr_T1JSF1_T1JSF1_TETUR_32264 and tr_T1K6L9_T1K6L9_TETUR_32264 are exactly identical! WARNING: Sequences tr_T1K8X2_T1K8X2_TETUR_32264 and tr_T1KRM4_T1KRM4_TETUR_32264 are exactly identical! WARNING: Sequences tr_A0A096MN99_A0A096MN99_PAPAN_9555 and tr_A0A2K5N5Q0_A0A2K5N5Q0_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096MN99_A0A096MN99_PAPAN_9555 and tr_A0A2K6CZT7_A0A2K6CZT7_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096MN99_A0A096MN99_PAPAN_9555 and tr_A0A2K5Z3X5_A0A2K5Z3X5_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A096P3V7_A0A096P3V7_PAPAN_9555 and tr_A0A0D9R1X3_A0A0D9R1X3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096P3V7_A0A096P3V7_PAPAN_9555 and tr_A0A2K5MS52_A0A2K5MS52_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096P3V7_A0A096P3V7_PAPAN_9555 and tr_A0A2K6A2W5_A0A2K6A2W5_MANLE_9568 are exactly identical! WARNING: Sequences tr_U4TVU5_U4TVU5_DENPD_77166 and tr_U4TYM9_U4TYM9_DENPD_77166 are exactly identical! WARNING: Sequences tr_U4TVU5_U4TVU5_DENPD_77166 and tr_U4UGB8_U4UGB8_DENPD_77166 are exactly identical! WARNING: Sequences tr_A0A151MNV7_A0A151MNV7_ALLMI_8496 and tr_A0A3Q0HBN8_A0A3Q0HBN8_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151P7A2_A0A151P7A2_ALLMI_8496 and tr_A0A3Q0HET8_A0A3Q0HET8_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091W0H2_A0A091W0H2_NIPNI_128390 and tr_A0A226NJP0_A0A226NJP0_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A2I0MCS5_A0A2I0MCS5_COLLI_8932 and tr_A0A1V4J9C1_A0A1V4J9C1_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A093G8L1_A0A093G8L1_DRYPU_118200 and tr_A0A1V4JWR6_A0A1V4JWR6_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1S3JKB4_A0A1S3JKB4_LINUN_7574 and tr_A0A1S3JL03_A0A1S3JL03_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A2D0SXL8_A0A2D0SXL8_ICTPU_7998 and tr_Q804E2_Q804E2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2G8JJD4_A0A2G8JJD4_STIJA_307972 and tr_A0A2G8KVP2_A0A2G8KVP2_STIJA_307972 are exactly identical! WARNING: Sequences tr_A0A2U3X226_A0A2U3X226_ODORO_9708 and tr_A0A2U3Z1X8_A0A2U3Z1X8_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A2Y9FG71_A0A2Y9FG71_PHYCD_9755 and tr_A0A384AV53_A0A384AV53_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 77 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/4_raxmlng_ancestral/Q96P09.raxml.reduced.phy Alignment comprises 1 partitions and 236 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 236 Gaps: 27.02 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/4_raxmlng_ancestral/Q96P09.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/3_mltree/Q96P09.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 59 / 4720 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -121217.168885 [00:00:00 -121217.168885] Initial branch length optimization [00:00:00 -119564.302102] Model parameter optimization (eps = 0.100000) [00:00:32] Tree #1, final logLikelihood: -119106.276719 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.080251,0.363153) (0.087702,0.505570) (0.330349,0.704093) (0.501697,1.383146) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/4_raxmlng_ancestral/Q96P09.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/4_raxmlng_ancestral/Q96P09.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/4_raxmlng_ancestral/Q96P09.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96P09/4_raxmlng_ancestral/Q96P09.raxml.log Analysis started: 12-Jul-2021 18:18:46 / finished: 12-Jul-2021 18:19:20 Elapsed time: 34.869 seconds Consumed energy: 2.659 Wh