RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 12-Jul-2021 18:22:07 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/2_msa/Q96G42_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/3_mltree/Q96G42.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/4_raxmlng_ancestral/Q96G42 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626103327 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/2_msa/Q96G42_nogap_msa.fasta [00:00:00] Loaded alignment with 999 taxa and 594 sites WARNING: Sequences tr_A0A1D5PQZ9_A0A1D5PQZ9_CHICK_9031 and sp_Q5F3N5_KLH14_CHICK_9031 are exactly identical! WARNING: Sequences sp_Q69ZK5_KLH14_MOUSE_10090 and tr_D3ZYQ7_D3ZYQ7_RAT_10116 are exactly identical! WARNING: Sequences sp_Q69ZK5_KLH14_MOUSE_10090 and tr_I3MR83_I3MR83_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3Y6S8_M3Y6S8_MUSPF_9669 and tr_H0XCW7_H0XCW7_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3Y6S8_M3Y6S8_MUSPF_9669 and tr_F1SAK5_F1SAK5_PIG_9823 are exactly identical! WARNING: Sequences tr_M3Y6S8_M3Y6S8_MUSPF_9669 and tr_A0A2Y9IVD2_A0A2Y9IVD2_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YZT4_M3YZT4_MUSPF_9669 and tr_G1LBI8_G1LBI8_AILME_9646 are exactly identical! WARNING: Sequences tr_G1R3I3_G1R3I3_NOMLE_61853 and tr_H2R076_H2R076_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1R3I3_G1R3I3_NOMLE_61853 and sp_Q9P2G3_KLH14_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1R3I3_G1R3I3_NOMLE_61853 and tr_A0A2R8N2R8_A0A2R8N2R8_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1R3I3_G1R3I3_NOMLE_61853 and tr_A0A096MW19_A0A096MW19_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1R3I3_G1R3I3_NOMLE_61853 and tr_A0A0D9RZ61_A0A0D9RZ61_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1R3I3_G1R3I3_NOMLE_61853 and tr_A0A2K5KHE5_A0A2K5KHE5_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1R3I3_G1R3I3_NOMLE_61853 and tr_A0A2K6DH29_A0A2K6DH29_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I2YF66_A0A2I2YF66_GORGO_9595 and tr_H2NGV9_H2NGV9_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I2YF66_A0A2I2YF66_GORGO_9595 and tr_H2R7A4_H2R7A4_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2YF66_A0A2I2YF66_GORGO_9595 and sp_Q9P2K6_KLH42_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QM91_G3QM91_GORGO_9595 and tr_H2QMI0_H2QMI0_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QM91_G3QM91_GORGO_9595 and tr_A0A2R8ZX93_A0A2R8ZX93_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1SVG1_G1SVG1_RABIT_9986 and tr_A0A2U3WU86_A0A2U3WU86_ODORO_9708 are exactly identical! WARNING: Sequences tr_H2QBM6_H2QBM6_PANTR_9598 and tr_F6WWV1_F6WWV1_MACMU_9544 are exactly identical! WARNING: Sequences tr_H2QBM6_H2QBM6_PANTR_9598 and tr_A0A096NPH1_A0A096NPH1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H2QBM6_H2QBM6_PANTR_9598 and tr_A0A0D9S1X1_A0A0D9S1X1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H2QBM6_H2QBM6_PANTR_9598 and tr_A0A2K5M7F8_A0A2K5M7F8_CERAT_9531 are exactly identical! WARNING: Sequences tr_H2QBM6_H2QBM6_PANTR_9598 and tr_A0A2K6BF68_A0A2K6BF68_MACNE_9545 are exactly identical! WARNING: Sequences tr_H2QBM6_H2QBM6_PANTR_9598 and tr_A0A2K5YUL8_A0A2K5YUL8_MANLE_9568 are exactly identical! WARNING: Sequences tr_H2QBM6_H2QBM6_PANTR_9598 and tr_A0A2R9BDI1_A0A2R9BDI1_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QMW8_H2QMW8_PANTR_9598 and tr_A0A2R9C7L2_A0A2R9C7L2_PANPA_9597 are exactly identical! WARNING: Sequences tr_W5PLA2_W5PLA2_SHEEP_9940 and tr_F1N465_F1N465_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9H2C0_GAN_HUMAN_9606 and tr_F6V530_F6V530_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q9H2C0_GAN_HUMAN_9606 and tr_A0A0D9S122_A0A0D9S122_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q9H2C0_GAN_HUMAN_9606 and tr_A0A2K5MS02_A0A2K5MS02_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q9H2C0_GAN_HUMAN_9606 and tr_A0A2K6DU00_A0A2K6DU00_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9H2C0_GAN_HUMAN_9606 and tr_A0A2R9BYJ1_A0A2R9BYJ1_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A1D5Q3F5_A0A1D5Q3F5_MACMU_9544 and tr_A0A2K6CWD4_A0A2K6CWD4_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6QK71_F6QK71_MACMU_9544 and tr_G7Q2C7_G7Q2C7_MACFA_9541 are exactly identical! WARNING: Sequences tr_F6QK71_F6QK71_MACMU_9544 and tr_A0A096NB55_A0A096NB55_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6QK71_F6QK71_MACMU_9544 and tr_A0A2K5KTJ2_A0A2K5KTJ2_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7HDS8_F7HDS8_MACMU_9544 and tr_A0A096N212_A0A096N212_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7HDS8_F7HDS8_MACMU_9544 and tr_A0A2K5KKZ9_A0A2K5KKZ9_CERAT_9531 are exactly identical! WARNING: Sequences tr_F4W735_F4W735_ACREC_103372 and tr_A0A151X803_A0A151X803_9HYME_64791 are exactly identical! WARNING: Sequences tr_F4W735_F4W735_ACREC_103372 and tr_A0A195DB30_A0A195DB30_9HYME_471704 are exactly identical! WARNING: Sequences tr_G7NZ97_G7NZ97_MACFA_9541 and tr_A0A2K5P333_A0A2K5P333_CERAT_9531 are exactly identical! WARNING: Sequences tr_G7NZ97_G7NZ97_MACFA_9541 and tr_A0A2K6DS95_A0A2K6DS95_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7NZ97_G7NZ97_MACFA_9541 and tr_A0A2K6A1S4_A0A2K6A1S4_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A044U9N5_A0A044U9N5_ONCVO_6282 and tr_A0A182E4W6_A0A182E4W6_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A096NGJ6_A0A096NGJ6_PAPAN_9555 and tr_A0A2K5LTS0_A0A2K5LTS0_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096NGJ6_A0A096NGJ6_PAPAN_9555 and tr_A0A2K6DVI2_A0A2K6DVI2_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096NJA2_A0A096NJA2_PAPAN_9555 and tr_A0A2K6AIX6_A0A2K6AIX6_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I3LFM9_A0A2I3LFM9_PAPAN_9555 and tr_A0A2K5KZQ4_A0A2K5KZQ4_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3LFM9_A0A2I3LFM9_PAPAN_9555 and tr_A0A2K6CGX3_A0A2K6CGX3_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I3MDD5_A0A2I3MDD5_PAPAN_9555 and tr_A0A2K5KWQ1_A0A2K5KWQ1_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A091VIM6_A0A091VIM6_NIPNI_128390 and tr_A0A087RC02_A0A087RC02_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091VIM6_A0A091VIM6_NIPNI_128390 and tr_A0A0A0AC46_A0A0A0AC46_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A2I0M9L9_A0A2I0M9L9_COLLI_8932 and tr_A0A226NLJ7_A0A226NLJ7_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A226N789_A0A226N789_CALSU_9009 and tr_A0A226PAF2_A0A226PAF2_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2K5N368_A0A2K5N368_CERAT_9531 and tr_A0A2K6A8F6_A0A2K6A8F6_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2U3V4K5_A0A2U3V4K5_TURTR_9739 and tr_A0A2Y9EGF3_A0A2Y9EGF3_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4B5X7_A0A2U4B5X7_TURTR_9739 and tr_A0A2Y9M0V4_A0A2Y9M0V4_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4B5X7_A0A2U4B5X7_TURTR_9739 and tr_A0A383Z1K8_A0A383Z1K8_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2U4BR90_A0A2U4BR90_TURTR_9739 and tr_A0A2Y9NXH8_A0A2Y9NXH8_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U3VC78_A0A2U3VC78_ODORO_9708 and tr_A0A2U3Y807_A0A2U3Y807_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A2U3WVC9_A0A2U3WVC9_ODORO_9708 and tr_A0A2Y9J0F6_A0A2Y9J0F6_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2Y9PBJ7_A0A2Y9PBJ7_DELLE_9749 and tr_A0A2Y9SDY0_A0A2Y9SDY0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2Y9PBJ7_A0A2Y9PBJ7_DELLE_9749 and tr_A0A383YWQ7_A0A383YWQ7_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 65 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/4_raxmlng_ancestral/Q96G42.raxml.reduced.phy Alignment comprises 1 partitions and 594 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 594 Gaps: 37.94 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/4_raxmlng_ancestral/Q96G42.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/3_mltree/Q96G42.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 149 / 11920 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -241360.717745 [00:00:00 -241360.717745] Initial branch length optimization [00:00:01 -209323.178250] Model parameter optimization (eps = 0.100000) [00:00:49] Tree #1, final logLikelihood: -208688.271466 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.097902,0.479923) (0.153494,0.386786) (0.330473,0.712116) (0.418131,1.574411) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/4_raxmlng_ancestral/Q96G42.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/4_raxmlng_ancestral/Q96G42.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/4_raxmlng_ancestral/Q96G42.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q96G42/4_raxmlng_ancestral/Q96G42.raxml.log Analysis started: 12-Jul-2021 18:22:07 / finished: 12-Jul-2021 18:23:02 Elapsed time: 54.863 seconds Consumed energy: 3.627 Wh