RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 02-Jun-2021 22:46:49 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/2_msa/Q96C45_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/3_mltree/Q96C45.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/4_raxmlng_ancestral/Q96C45 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622663209 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/2_msa/Q96C45_nogap_msa.fasta [00:00:00] Loaded alignment with 992 taxa and 1275 sites WARNING: Sequences tr_Q27687_Q27687_LEIMA_5664 and tr_A4HXY2_A4HXY2_LEIIN_5671 are exactly identical! WARNING: Sequences sp_Q8C015_PAK5_MOUSE_10090 and sp_D4A280_PAK5_RAT_10116 are exactly identical! WARNING: Sequences sp_Q8C015_PAK5_MOUSE_10090 and tr_A0A1U8BX66_A0A1U8BX66_MESAU_10036 are exactly identical! WARNING: Sequences tr_W5JMH2_W5JMH2_ANODA_43151 and tr_Q7QGS5_Q7QGS5_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JMH2_W5JMH2_ANODA_43151 and tr_A0A084VSJ1_A0A084VSJ1_ANOSI_74873 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_G1SZY2_G1SZY2_RABIT_9986 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_E2R481_E2R481_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2J8MSR9_A0A2J8MSR9_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_F7FKL1_F7FKL1_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_F7DBS7_F7DBS7_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_G7PGY7_G7PGY7_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_L5K0F9_L5K0F9_PTEAL_9402 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2I2UF08_A0A2I2UF08_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A096NVH8_A0A096NVH8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A091DAA5_A0A091DAA5_FUKDA_885580 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A0D9RME3_A0A0D9RME3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A1S3EQL1_A0A1S3EQL1_DIPOR_10020 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2K5KLM9_A0A2K5KLM9_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2K6B4X2_A0A2K6B4X2_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2K5XKA4_A0A2K5XKA4_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2R8ZLQ7_A0A2R8ZLQ7_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2U3WYV8_A0A2U3WYV8_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A2Y9ISB7_A0A2Y9ISB7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y502_M3Y502_MUSPF_9669 and tr_A0A384D3B5_A0A384D3B5_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3Z221_M3Z221_MUSPF_9669 and tr_A0A2Y9L409_A0A2Y9L409_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G1RW86_G1RW86_NOMLE_61853 and tr_H0WW00_H0WW00_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G1RWR4_G1RWR4_NOMLE_61853 and sp_O96013_PAK4_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1RWR4_G1RWR4_NOMLE_61853 and tr_A0A0A0MW16_A0A0A0MW16_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1RWR4_G1RWR4_NOMLE_61853 and tr_A0A2K5NMW1_A0A2K5NMW1_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1PKR0_G1PKR0_MYOLU_59463 and tr_G3QQY0_G3QQY0_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1PKR0_G1PKR0_MYOLU_59463 and tr_F7DC48_F7DC48_HORSE_9796 are exactly identical! WARNING: Sequences tr_G1PKR0_G1PKR0_MYOLU_59463 and tr_D2HGF8_D2HGF8_AILME_9646 are exactly identical! WARNING: Sequences tr_G3HJC7_G3HJC7_CRIGR_10029 and tr_B5DF62_B5DF62_RAT_10116 are exactly identical! WARNING: Sequences tr_J3KDN2_J3KDN2_COCIM_246410 and tr_A0A0J6YA78_A0A0J6YA78_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6QR20_B6QR20_TALMQ_441960 and tr_A0A093VCG0_A0A093VCG0_TALMA_1077442 are exactly identical! WARNING: Sequences tr_E2RE16_E2RE16_CANLF_9615 and tr_I3LSG7_I3LSG7_PIG_9823 are exactly identical! WARNING: Sequences tr_E2RE16_E2RE16_CANLF_9615 and tr_G5E5G9_G5E5G9_BOVIN_9913 are exactly identical! WARNING: Sequences tr_E2RE16_E2RE16_CANLF_9615 and tr_M3WSV7_M3WSV7_FELCA_9685 are exactly identical! WARNING: Sequences tr_E2RE16_E2RE16_CANLF_9615 and tr_A0A2U3VNB6_A0A2U3VNB6_ODORO_9708 are exactly identical! WARNING: Sequences tr_E2RE16_E2RE16_CANLF_9615 and tr_A0A2U3Y6V8_A0A2U3Y6V8_LEPWE_9713 are exactly identical! WARNING: Sequences tr_E2RE16_E2RE16_CANLF_9615 and tr_A0A2Y9PFK0_A0A2Y9PFK0_DELLE_9749 are exactly identical! WARNING: Sequences tr_E2RE16_E2RE16_CANLF_9615 and tr_A0A383ZYB3_A0A383ZYB3_BALAS_310752 are exactly identical! WARNING: Sequences tr_B0WBF0_B0WBF0_CULQU_7176 and tr_Q170F5_Q170F5_AEDAE_7159 are exactly identical! WARNING: Sequences tr_A0A3B5RCW0_A0A3B5RCW0_XIPMA_8083 and tr_A0A087X8V8_A0A087X8V8_POEFO_48698 are exactly identical! WARNING: Sequences tr_G5AM93_G5AM93_HETGA_10181 and tr_A0A091DH81_A0A091DH81_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G3SVV4_G3SVV4_LOXAF_9785 and tr_A0A2Y9RU19_A0A2Y9RU19_TRIMA_127582 are exactly identical! WARNING: Sequences tr_H0Z721_H0Z721_TAEGU_59729 and tr_A0A218V884_A0A218V884_9PASE_299123 are exactly identical! WARNING: Sequences tr_F2SWB7_F2SWB7_TRIRC_559305 and tr_A0A178EYK0_A0A178EYK0_TRIRU_5551 are exactly identical! WARNING: Sequences tr_M4ELP4_M4ELP4_BRARP_51351 and tr_A0A078HDX5_A0A078HDX5_BRANA_3708 are exactly identical! WARNING: Sequences tr_M2R249_M2R249_COCSN_665912 and tr_M2UVF1_M2UVF1_COCH5_701091 are exactly identical! WARNING: Sequences tr_M2R249_M2R249_COCSN_665912 and tr_W6XRP0_W6XRP0_COCCA_930089 are exactly identical! WARNING: Sequences tr_M2R249_M2R249_COCSN_665912 and tr_W6Z4D2_W6Z4D2_COCMI_930090 are exactly identical! WARNING: Sequences tr_W2PK21_W2PK21_PHYPN_761204 and tr_A0A0W8CHP5_A0A0W8CHP5_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2PK21_W2PK21_PHYPN_761204 and tr_W2FWN5_W2FWN5_PHYPR_4792 are exactly identical! WARNING: Sequences tr_W2RJX7_W2RJX7_PHYPN_761204 and tr_A0A0W8D448_A0A0W8D448_PHYNI_4790 are exactly identical! WARNING: Sequences tr_A0A0D9RPB2_A0A0D9RPB2_CHLSB_60711 and tr_A0A2K6D6X3_A0A2K6D6X3_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A0A1MXU4_A0A0A1MXU4_9FUNG_58291 and tr_A0A367KEU3_A0A367KEU3_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A091F874_A0A091F874_CORBR_85066 and tr_A0A091JQY4_A0A091JQY4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A091F874_A0A091F874_CORBR_85066 and tr_A0A091UPR3_A0A091UPR3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091F874_A0A091F874_CORBR_85066 and tr_A0A087R896_A0A087R896_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091F874_A0A091F874_CORBR_85066 and tr_A0A091WAC3_A0A091WAC3_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091F874_A0A091F874_CORBR_85066 and tr_A0A091FUS6_A0A091FUS6_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091F874_A0A091F874_CORBR_85066 and tr_A0A0A0AI49_A0A0A0AI49_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091F874_A0A091F874_CORBR_85066 and tr_A0A091IBT6_A0A091IBT6_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1S4CBN6_A0A1S4CBN6_TOBAC_4097 and tr_A0A1U7YBW2_A0A1U7YBW2_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4DI99_A0A1S4DI99_TOBAC_4097 and tr_A0A1U7VQY5_A0A1U7VQY5_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S3MB70_A0A1S3MB70_SALSA_8030 and tr_A0A060XEW5_A0A060XEW5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A226MDP7_A0A226MDP7_CALSU_9009 and tr_A0A226NQ60_A0A226NQ60_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226NMH0_A0A226NMH0_CALSU_9009 and tr_A0A226PGU7_A0A226PGU7_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2U4BV27_A0A2U4BV27_TURTR_9739 and tr_A0A2Y9EUA5_A0A2Y9EUA5_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4BV27_A0A2U4BV27_TURTR_9739 and tr_A0A383YR87_A0A383YR87_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 71 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/4_raxmlng_ancestral/Q96C45.raxml.reduced.phy Alignment comprises 1 partitions and 1275 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 1275 Gaps: 53.81 % Invariant sites: 0.00 % NOTE: Binary MSA file already exists: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/4_raxmlng_ancestral/Q96C45.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/3_mltree/Q96C45.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 319 / 25520 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -429062.383622 [00:00:00 -429062.383622] Initial branch length optimization [00:00:03 -401296.415947] Model parameter optimization (eps = 0.100000) [00:02:03] Tree #1, final logLikelihood: -399847.122950 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.074537,0.348368) (0.118504,0.432801) (0.464256,0.842030) (0.342703,1.551861) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/4_raxmlng_ancestral/Q96C45.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/4_raxmlng_ancestral/Q96C45.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/4_raxmlng_ancestral/Q96C45.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q96C45/4_raxmlng_ancestral/Q96C45.raxml.log Analysis started: 02-Jun-2021 22:46:49 / finished: 02-Jun-2021 22:49:04 Elapsed time: 134.699 seconds