RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 02-Jun-2021 18:40:08 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/2_msa/Q8WWF5_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/3_mltree/Q8WWF5.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/4_raxmlng_ancestral/Q8WWF5 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622648408 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/2_msa/Q8WWF5_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 429 sites WARNING: Sequences tr_F1NRC6_F1NRC6_CHICK_9031 and tr_G1N2Q3_G1N2Q3_MELGA_9103 are exactly identical! WARNING: Sequences tr_M3XTY6_M3XTY6_MUSPF_9669 and tr_A0A2Y9JN45_A0A2Y9JN45_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3XTY6_M3XTY6_MUSPF_9669 and tr_A0A384DEL1_A0A384DEL1_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YHP5_M3YHP5_MUSPF_9669 and tr_A0A2Y9L2R8_A0A2Y9L2R8_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_G3QW07_G3QW07_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and sp_Q5RCV8_RNF13_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_H2QNK4_H2QNK4_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and sp_O43567_RNF13_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_H9ELX5_H9ELX5_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_G7NZM7_G7NZM7_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_A0A096MS08_A0A096MS08_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_A0A0D9RGK1_A0A0D9RGK1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_A0A2K6A6Z9_A0A2K6A6Z9_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QSD2_G1QSD2_NOMLE_61853 and tr_A0A2R9BEY4_A0A2R9BEY4_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QDA6_G3QDA6_GORGO_9595 and tr_H2QBZ2_H2QBZ2_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QDA6_G3QDA6_GORGO_9595 and tr_A0A2R9BN69_A0A2R9BN69_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QF09_G3QF09_GORGO_9595 and tr_A0A2J8UT34_A0A2J8UT34_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QF09_G3QF09_GORGO_9595 and sp_Q9NVW2_RNF12_HUMAN_9606 are exactly identical! WARNING: Sequences tr_E2RSZ0_E2RSZ0_CANLF_9615 and tr_A0A2U3XQM4_A0A2U3XQM4_LEPWE_9713 are exactly identical! WARNING: Sequences tr_H2QYT6_H2QYT6_PANTR_9598 and tr_A0A2R9A0I2_A0A2R9A0I2_PANPA_9597 are exactly identical! WARNING: Sequences tr_F6VTK5_F6VTK5_HORSE_9796 and tr_I3NDK7_I3NDK7_ICTTR_43179 are exactly identical! WARNING: Sequences tr_W5P3L5_W5P3L5_SHEEP_9940 and sp_Q0VD51_RNF13_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A0E0GE50_A0A0E0GE50_ORYNI_4536 and tr_B8AED6_B8AED6_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0GE50_A0A0E0GE50_ORYNI_4536 and tr_A0A0E0NM78_A0A0E0NM78_ORYRU_4529 are exactly identical! WARNING: Sequences tr_F7EU71_F7EU71_MACMU_9544 and tr_G7PT98_G7PT98_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7EU71_F7EU71_MACMU_9544 and tr_A0A2K5LHF8_A0A2K5LHF8_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7EU71_F7EU71_MACMU_9544 and tr_A0A2K5ZPG2_A0A2K5ZPG2_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7H8F3_F7H8F3_MACMU_9544 and tr_A0A2K5L5D6_A0A2K5L5D6_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7H8F3_F7H8F3_MACMU_9544 and tr_A0A2K6AUK3_A0A2K6AUK3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7H8F3_F7H8F3_MACMU_9544 and tr_A0A2K5ZMT5_A0A2K5ZMT5_MANLE_9568 are exactly identical! WARNING: Sequences tr_I1P575_I1P575_ORYGL_4538 and tr_A0A0D3FBM8_A0A0D3FBM8_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_I1P7Y3_I1P7Y3_ORYGL_4538 and sp_Q10R93_RMR1_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_H0ZMD8_H0ZMD8_TAEGU_59729 and tr_A0A218UCD3_A0A218UCD3_9PASE_299123 are exactly identical! WARNING: Sequences tr_F4WV10_F4WV10_ACREC_103372 and tr_A0A151J1N6_A0A151J1N6_9HYME_471704 are exactly identical! WARNING: Sequences tr_D2I1T1_D2I1T1_AILME_9646 and tr_M3VZS3_M3VZS3_FELCA_9685 are exactly identical! WARNING: Sequences tr_D2I1T1_D2I1T1_AILME_9646 and tr_A0A2Y9L145_A0A2Y9L145_ENHLU_391180 are exactly identical! WARNING: Sequences tr_D2I1T1_D2I1T1_AILME_9646 and tr_A0A384D3B3_A0A384D3B3_URSMA_29073 are exactly identical! WARNING: Sequences tr_B3RIX0_B3RIX0_TRIAD_10228 and tr_A0A369RVA2_A0A369RVA2_9METZ_287889 are exactly identical! WARNING: Sequences tr_C4V7L8_C4V7L8_NOSCE_578460 and tr_A0A0F9ZEW7_A0A0F9ZEW7_9MICR_40302 are exactly identical! WARNING: Sequences tr_M4E6X4_M4E6X4_BRARP_51351 and tr_A0A078G7J3_A0A078G7J3_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4FBC0_M4FBC0_BRARP_51351 and tr_A0A078IFZ6_A0A078IFZ6_BRANA_3708 are exactly identical! WARNING: Sequences tr_W2QWK6_W2QWK6_PHYPN_761204 and tr_W2FV22_W2FV22_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A015JK86_A0A015JK86_9GLOM_1432141 and tr_A0A2H5SMM8_A0A2H5SMM8_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A067DVQ6_A0A067DVQ6_CITSI_2711 and tr_A0A2H5NI87_A0A2H5NI87_CITUN_55188 are exactly identical! WARNING: Sequences tr_V4SMK0_V4SMK0_9ROSI_85681 and tr_A0A2H5NJV3_A0A2H5NJV3_CITUN_55188 are exactly identical! WARNING: Sequences tr_V4U279_V4U279_9ROSI_85681 and tr_A0A2H5PWE3_A0A2H5PWE3_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A0D2SV89_A0A0D2SV89_GOSRA_29730 and tr_A0A1U8MQU2_A0A1U8MQU2_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0Q3PWS1_A0A0Q3PWS1_AMAAE_12930 and tr_A0A091W2B7_A0A091W2B7_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091J7D6_A0A091J7D6_EGRGA_188379 and tr_A0A091VM94_A0A091VM94_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091J7D6_A0A091J7D6_EGRGA_188379 and tr_A0A087QQT5_A0A087QQT5_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091J7D6_A0A091J7D6_EGRGA_188379 and tr_A0A093GAW6_A0A093GAW6_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091J7D6_A0A091J7D6_EGRGA_188379 and tr_A0A091IDZ4_A0A091IDZ4_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A0V1D5B0_A0A0V1D5B0_TRIBR_45882 and tr_A0A0V0VN09_A0A0V0VN09_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1D5B0_A0A0V1D5B0_TRIBR_45882 and tr_A0A0V1LG91_A0A0V1LG91_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V1D5B0_A0A0V1D5B0_TRIBR_45882 and tr_A0A0V1NXW6_A0A0V1NXW6_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1NAI7_A0A0V1NAI7_9BILA_268474 and tr_A0A0V1I9K2_A0A0V1I9K2_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A1S4AH20_A0A1S4AH20_TOBAC_4097 and tr_A0A1U7VHE5_A0A1U7VHE5_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4ALK7_A0A1S4ALK7_TOBAC_4097 and tr_A0A1U7W6L4_A0A1U7W6L4_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4DDC3_A0A1S4DDC3_TOBAC_4097 and tr_A0A1U7W516_A0A1U7W516_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1U8M809_A0A1U8M809_GOSHI_3635 and tr_A0A1U8MUD2_A0A1U8MUD2_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A226NJX3_A0A226NJX3_CALSU_9009 and tr_A0A226P6T9_A0A226P6T9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2U4B3D3_A0A2U4B3D3_TURTR_9739 and tr_A0A2Y9FKJ6_A0A2Y9FKJ6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4B9L0_A0A2U4B9L0_TURTR_9739 and tr_A0A2Y9NTW9_A0A2Y9NTW9_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4B9L0_A0A2U4B9L0_TURTR_9739 and tr_A0A384ALH4_A0A384ALH4_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 64 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/4_raxmlng_ancestral/Q8WWF5.raxml.reduced.phy Alignment comprises 1 partitions and 429 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 429 Gaps: 49.07 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/4_raxmlng_ancestral/Q8WWF5.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/3_mltree/Q8WWF5.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 108 / 8640 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -176247.735165 [00:00:00 -176247.735165] Initial branch length optimization [00:00:02 -173894.238979] Model parameter optimization (eps = 0.100000) [00:01:08] Tree #1, final logLikelihood: -173350.428548 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.052774,0.214760) (0.085379,0.407516) (0.370961,0.780087) (0.490885,1.353658) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/4_raxmlng_ancestral/Q8WWF5.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/4_raxmlng_ancestral/Q8WWF5.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/4_raxmlng_ancestral/Q8WWF5.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q8WWF5/4_raxmlng_ancestral/Q8WWF5.raxml.log Analysis started: 02-Jun-2021 18:40:08 / finished: 02-Jun-2021 18:41:22 Elapsed time: 73.294 seconds Consumed energy: 3.856 Wh