RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 13:54:48 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/2_msa/Q8IWU2_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/3_mltree/Q8IWU2.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/4_raxmlng_ancestral/Q8IWU2 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622804088 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/2_msa/Q8IWU2_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 1503 sites WARNING: Sequences tr_A0A1D5P6T3_A0A1D5P6T3_CHICK_9031 and tr_G1N117_G1N117_MELGA_9103 are exactly identical! WARNING: Sequences tr_M3YAM5_M3YAM5_MUSPF_9669 and tr_A0A2Y9L836_A0A2Y9L836_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_H2PSJ2_H2PSJ2_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_A0A2J8MRU2_A0A2J8MRU2_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and sp_Q16620_NTRK2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_F7DGW1_F7DGW1_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_F6T4E4_F6T4E4_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_G7PSM1_G7PSM1_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_A0A2I3MH64_A0A2I3MH64_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_A0A2K5NCA1_A0A2K5NCA1_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_A0A2K6BIB6_A0A2K6BIB6_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1QU92_G1QU92_NOMLE_61853 and tr_A0A2R9BIL6_A0A2R9BIL6_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_H2PH70_H2PH70_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_H2QRW3_H2QRW3_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and sp_Q08881_ITK_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_F7GS57_F7GS57_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_G7P6R0_G7P6R0_MACFA_9541 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_A0A096MS14_A0A096MS14_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_A0A0D9RE75_A0A0D9RE75_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_A0A2K5LNC1_A0A2K5LNC1_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_A0A2K6AVK0_A0A2K6AVK0_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_A0A2K6A5N1_A0A2K6A5N1_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3QM29_G3QM29_GORGO_9595 and tr_A0A2R9AHL5_A0A2R9AHL5_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RAQ4_G3RAQ4_GORGO_9595 and sp_P08069_IGF1R_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2N5B2_H2N5B2_PONAB_9601 and tr_A0A2I3T3D1_A0A2I3T3D1_PANTR_9598 are exactly identical! WARNING: Sequences tr_H2N5B2_H2N5B2_PONAB_9601 and tr_A0A2R9B3Y6_A0A2R9B3Y6_PANPA_9597 are exactly identical! WARNING: Sequences tr_E2RKA1_E2RKA1_CANLF_9615 and tr_G1LBG1_G1LBG1_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A2I3RFV3_A0A2I3RFV3_PANTR_9598 and tr_G7PYV6_G7PYV6_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I3RFV3_A0A2I3RFV3_PANTR_9598 and tr_A0A0A0MW58_A0A0A0MW58_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H2QA49_H2QA49_PANTR_9598 and tr_A0A2R8ZYJ5_A0A2R8ZYJ5_PANPA_9597 are exactly identical! WARNING: Sequences tr_F7AH69_F7AH69_MACMU_9544 and tr_A0A096N4L2_A0A096N4L2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7AH69_F7AH69_MACMU_9544 and tr_A0A0D9RQZ5_A0A0D9RQZ5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7AH69_F7AH69_MACMU_9544 and tr_A0A2K5P2X2_A0A2K5P2X2_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7AH69_F7AH69_MACMU_9544 and tr_A0A2K5ZXQ4_A0A2K5ZXQ4_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7DJ75_F7DJ75_MACMU_9544 and tr_A0A096MRW3_A0A096MRW3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7DJ75_F7DJ75_MACMU_9544 and tr_A0A2K5NXD9_A0A2K5NXD9_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7DJ75_F7DJ75_MACMU_9544 and tr_A0A2K6E1K6_A0A2K6E1K6_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7DJ75_F7DJ75_MACMU_9544 and tr_A0A2K5ZMQ5_A0A2K5ZMQ5_MANLE_9568 are exactly identical! WARNING: Sequences tr_H0ZEE4_H0ZEE4_TAEGU_59729 and tr_A0A091E5W5_A0A091E5W5_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0ZEE4_H0ZEE4_TAEGU_59729 and tr_A0A218V095_A0A218V095_9PASE_299123 are exactly identical! WARNING: Sequences tr_G7P9I7_G7P9I7_MACFA_9541 and tr_A0A2I3MLM3_A0A2I3MLM3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7P9I7_G7P9I7_MACFA_9541 and tr_A0A2K5L870_A0A2K5L870_CERAT_9531 are exactly identical! WARNING: Sequences tr_G7P9I7_G7P9I7_MACFA_9541 and tr_A0A2K6D2L3_A0A2K6D2L3_MACNE_9545 are exactly identical! WARNING: Sequences tr_U3IM06_U3IM06_ANAPL_8839 and tr_A0A2I0MD56_A0A2I0MD56_COLLI_8932 are exactly identical! WARNING: Sequences tr_U3IM06_U3IM06_ANAPL_8839 and tr_A0A1V4JDQ0_A0A1V4JDQ0_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A151M921_A0A151M921_ALLMI_8496 and tr_A0A1U7RT92_A0A1U7RT92_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151NYQ1_A0A151NYQ1_ALLMI_8496 and tr_A0A3Q0H314_A0A3Q0H314_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091IVQ4_A0A091IVQ4_EGRGA_188379 and tr_A0A091VGU9_A0A091VGU9_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091IVQ4_A0A091IVQ4_EGRGA_188379 and tr_A0A087R5C7_A0A087R5C7_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091IVQ4_A0A091IVQ4_EGRGA_188379 and tr_A0A093K1W3_A0A093K1W3_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A091IVQ4_A0A091IVQ4_EGRGA_188379 and tr_A0A091VPT0_A0A091VPT0_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091IVQ4_A0A091IVQ4_EGRGA_188379 and tr_A0A099ZXY2_A0A099ZXY2_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091IVQ4_A0A091IVQ4_EGRGA_188379 and tr_A0A091IHS7_A0A091IHS7_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091J0U9_A0A091J0U9_EGRGA_188379 and tr_A0A087RB90_A0A087RB90_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091J0U9_A0A091J0U9_EGRGA_188379 and tr_A0A093GT55_A0A093GT55_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A091J0U9_A0A091J0U9_EGRGA_188379 and tr_A0A091V3R3_A0A091V3R3_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A087QHE2_A0A087QHE2_APTFO_9233 and tr_A0A091W9L5_A0A091W9L5_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A087QHE2_A0A087QHE2_APTFO_9233 and tr_A0A099ZDJ5_A0A099ZDJ5_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A2I0LPD9_A0A2I0LPD9_COLLI_8932 and tr_A0A1V4KQM4_A0A1V4KQM4_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0V1MY60_A0A0V1MY60_9BILA_268474 and tr_A0A0V1MYP3_A0A0V1MYP3_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A1I7UAE4_A0A1I7UAE4_9PELO_1561998 and tr_A0A1I7UAE5_A0A1I7UAE5_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A0A226NMH2_A0A226NMH2_CALSU_9009 and tr_A0A226NXN8_A0A226NXN8_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0PUJ9_A0A2D0PUJ9_ICTPU_7998 and tr_A0A2D0PVF9_A0A2D0PVF9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RYH1_A0A2D0RYH1_ICTPU_7998 and tr_W5UGS1_W5UGS1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U4BS11_A0A2U4BS11_TURTR_9739 and tr_A0A2Y9MAX3_A0A2Y9MAX3_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4BS11_A0A2U4BS11_TURTR_9739 and tr_A0A2Y9TCL8_A0A2Y9TCL8_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4BS11_A0A2U4BS11_TURTR_9739 and tr_A0A383ZPG7_A0A383ZPG7_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2U4C6X6_A0A2U4C6X6_TURTR_9739 and tr_A0A384AV05_A0A384AV05_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2Y9LZU1_A0A2Y9LZU1_DELLE_9749 and tr_A0A383Z9P6_A0A383Z9P6_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 69 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/4_raxmlng_ancestral/Q8IWU2.raxml.reduced.phy Alignment comprises 1 partitions and 1503 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 1503 Gaps: 59.79 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/4_raxmlng_ancestral/Q8IWU2.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/3_mltree/Q8IWU2.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 376 / 30080 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -356150.551579 [00:00:00 -356150.551579] Initial branch length optimization [00:00:03 -347358.319944] Model parameter optimization (eps = 0.100000) [00:01:16] Tree #1, final logLikelihood: -346301.931012 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.056984,0.165115) (0.059548,0.174485) (0.313624,0.575236) (0.569844,1.403530) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/4_raxmlng_ancestral/Q8IWU2.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/4_raxmlng_ancestral/Q8IWU2.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/4_raxmlng_ancestral/Q8IWU2.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q8IWU2/4_raxmlng_ancestral/Q8IWU2.raxml.log Analysis started: 04-Jun-2021 13:54:48 / finished: 04-Jun-2021 13:56:18 Elapsed time: 89.272 seconds