RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 12-Jul-2021 18:23:23 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/2_msa/Q86YA3_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/3_mltree/Q86YA3.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/4_raxmlng_ancestral/Q86YA3 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626103403 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/2_msa/Q86YA3_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 2104 sites WARNING: Sequences tr_E1C0J4_E1C0J4_CHICK_9031 and tr_A0A226NZ98_A0A226NZ98_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q9EPU0_RENT1_MOUSE_10090 and tr_A0A0U1RS25_A0A0U1RS25_RAT_10116 are exactly identical! WARNING: Sequences tr_M3YVP4_M3YVP4_MUSPF_9669 and tr_E2RL81_E2RL81_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3YVP4_M3YVP4_MUSPF_9669 and tr_A0A2Y9J0Z4_A0A2Y9J0Z4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_J3K905_J3K905_COCIM_246410 and tr_E9DI37_E9DI37_COCPS_443226 are exactly identical! WARNING: Sequences tr_J3K905_J3K905_COCIM_246410 and tr_A0A0J6Y8E4_A0A0J6Y8E4_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6QCK9_B6QCK9_TALMQ_441960 and tr_A0A093XID1_A0A093XID1_TALMA_1077442 are exactly identical! WARNING: Sequences tr_C0NNJ3_C0NNJ3_AJECG_447093 and tr_C6HFT1_C6HFT1_AJECH_544712 are exactly identical! WARNING: Sequences tr_C0NNJ3_C0NNJ3_AJECG_447093 and tr_F0UMG1_F0UMG1_AJEC8_544711 are exactly identical! WARNING: Sequences tr_B8N676_B8N676_ASPFN_332952 and tr_Q2UCH7_Q2UCH7_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8N676_B8N676_ASPFN_332952 and tr_A0A0F0IG97_A0A0F0IG97_ASPPU_1403190 are exactly identical! WARNING: Sequences tr_B8N676_B8N676_ASPFN_332952 and tr_A0A1S9DQD0_A0A1S9DQD0_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_B8N676_B8N676_ASPFN_332952 and tr_A0A2G7G7H9_A0A2G7G7H9_9EURO_656916 are exactly identical! WARNING: Sequences tr_A0A179U8M2_A0A179U8M2_BLAGS_559298 and tr_C5GIH5_C5GIH5_AJEDR_559297 are exactly identical! WARNING: Sequences tr_A0A2I3RWB5_A0A2I3RWB5_PANTR_9598 and tr_A0A287D9H5_A0A287D9H5_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A0A2I3RWB5_A0A2I3RWB5_PANTR_9598 and tr_H0X7W8_H0X7W8_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A0A2I3RWB5_A0A2I3RWB5_PANTR_9598 and sp_Q92900_RENT1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I3RWB5_A0A2I3RWB5_PANTR_9598 and tr_F7FFJ3_F7FFJ3_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I3RWB5_A0A2I3RWB5_PANTR_9598 and tr_F7HDF7_F7HDF7_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A2I3RWB5_A0A2I3RWB5_PANTR_9598 and tr_A0A2I3MB73_A0A2I3MB73_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I3RWB5_A0A2I3RWB5_PANTR_9598 and tr_A0A2K6ALR1_A0A2K6ALR1_MACNE_9545 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_W7LX99_W7LX99_GIBM7_334819 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_A0A0D2XNG4_A0A0D2XNG4_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_S0E1I0_S0E1I0_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_X0CIY9_X0CIY9_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_A0A2H3SW07_A0A2H3SW07_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_A0A2H3GY76_A0A2H3GY76_FUSOX_327505 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_A0A2K0WBG5_A0A2K0WBG5_GIBNY_42673 are exactly identical! WARNING: Sequences tr_F9FS40_F9FS40_FUSOF_660025 and tr_A0A365MXW4_A0A365MXW4_GIBIN_948311 are exactly identical! WARNING: Sequences tr_J4KN16_J4KN16_BEAB2_655819 and tr_A0A0A2VX51_A0A0A2VX51_BEABA_1245745 are exactly identical! WARNING: Sequences tr_A0A088A104_A0A088A104_APIME_7460 and tr_A0A2A3ELK0_A0A2A3ELK0_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NDR3_A0A158NDR3_ATTCE_12957 and tr_A0A151X4G6_A0A151X4G6_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NDR3_A0A158NDR3_ATTCE_12957 and tr_A0A195D7K7_A0A195D7K7_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NDR3_A0A158NDR3_ATTCE_12957 and tr_A0A195BQY4_A0A195BQY4_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NDR3_A0A158NDR3_ATTCE_12957 and tr_A0A195EZE6_A0A195EZE6_9HYME_34720 are exactly identical! WARNING: Sequences tr_A2QRH3_A2QRH3_ASPNC_425011 and tr_G3YHG6_G3YHG6_ASPNA_380704 are exactly identical! WARNING: Sequences tr_G7XNH3_G7XNH3_ASPKW_1033177 and tr_A0A146FTK0_A0A146FTK0_9EURO_1069201 are exactly identical! WARNING: Sequences tr_G2XUQ9_G2XUQ9_BOTF4_999810 and tr_M7TLN5_M7TLN5_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_A0A287BFP7_A0A287BFP7_PIG_9823 and tr_E1BEK9_E1BEK9_BOVIN_9913 are exactly identical! WARNING: Sequences tr_L0P928_L0P928_PNEJ8_1209962 and tr_A0A0W4ZCZ9_A0A0W4ZCZ9_PNEJ7_1408657 are exactly identical! WARNING: Sequences tr_U3INS3_U3INS3_ANAPL_8839 and tr_A0A091JFB2_A0A091JFB2_EGRGA_188379 are exactly identical! WARNING: Sequences tr_U3INS3_U3INS3_ANAPL_8839 and tr_A0A091V3N0_A0A091V3N0_NIPNI_128390 are exactly identical! WARNING: Sequences tr_U3INS3_U3INS3_ANAPL_8839 and tr_A0A087R321_A0A087R321_APTFO_9233 are exactly identical! WARNING: Sequences tr_U3INS3_U3INS3_ANAPL_8839 and tr_A0A093HN62_A0A093HN62_STRCA_441894 are exactly identical! WARNING: Sequences tr_U3INS3_U3INS3_ANAPL_8839 and tr_A0A091X2M4_A0A091X2M4_OPIHO_30419 are exactly identical! WARNING: Sequences tr_U3INS3_U3INS3_ANAPL_8839 and tr_A0A091H5T2_A0A091H5T2_9AVES_55661 are exactly identical! WARNING: Sequences tr_U3INS3_U3INS3_ANAPL_8839 and tr_A0A0A0APW8_A0A0A0APW8_CHAVO_50402 are exactly identical! WARNING: Sequences tr_W2Q3V4_W2Q3V4_PHYPN_761204 and tr_A0A0W8CKT1_A0A0W8CKT1_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2Q3V4_W2Q3V4_PHYPN_761204 and tr_W2L3E7_W2L3E7_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A010RJV5_A0A010RJV5_9PEZI_1445577 and tr_A0A135V3U3_A0A135V3U3_9PEZI_1209931 are exactly identical! WARNING: Sequences tr_A0A015KKB5_A0A015KKB5_9GLOM_1432141 and tr_A0A2H5RCW5_A0A2H5RCW5_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A044V7R3_A0A044V7R3_ONCVO_6282 and tr_A0A182DZI7_A0A182DZI7_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A084QEK0_A0A084QEK0_STAC4_1283841 and tr_A0A084REC0_A0A084REC0_STACH_1283842 are exactly identical! WARNING: Sequences tr_A0A0F9X6M0_A0A0F9X6M0_TRIHA_5544 and tr_A0A2T4AL40_A0A2T4AL40_TRIHA_983964 are exactly identical! WARNING: Sequences tr_A0A0K0F658_A0A0K0F658_STRVS_75913 and tr_A0A0N5CES7_A0A0N5CES7_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A091EFI7_A0A091EFI7_CORBR_85066 and tr_A0A093PXL0_A0A093PXL0_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A0V1DC80_A0A0V1DC80_TRIBR_45882 and tr_A0A0V0X664_A0A0V0X664_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V1DC80_A0A0V1DC80_TRIBR_45882 and tr_A0A0V0VJ50_A0A0V0VJ50_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1DC80_A0A0V1DC80_TRIBR_45882 and tr_A0A0V1L6U7_A0A0V1L6U7_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V1DC80_A0A0V1DC80_TRIBR_45882 and tr_A0A0V1P9P9_A0A0V1P9P9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1DC80_A0A0V1DC80_TRIBR_45882 and tr_A0A0V0TZC7_A0A0V0TZC7_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3QZL1_A0A1S3QZL1_SALSA_8030 and tr_A0A060X7M4_A0A060X7M4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1R1X811_A0A1R1X811_9FUNG_133412 and tr_A0A1R1XL96_A0A1R1XL96_9FUNG_133412 are exactly identical! WARNING: Sequences tr_A0A2U4AL74_A0A2U4AL74_TURTR_9739 and tr_A0A2Y9M426_A0A2Y9M426_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4AL74_A0A2U4AL74_TURTR_9739 and tr_A0A2Y9F7V0_A0A2Y9F7V0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4AL74_A0A2U4AL74_TURTR_9739 and tr_A0A384B783_A0A384B783_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 66 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/4_raxmlng_ancestral/Q86YA3.raxml.reduced.phy Alignment comprises 1 partitions and 2104 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 2104 Gaps: 64.90 % Invariant sites: 0.10 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/4_raxmlng_ancestral/Q86YA3.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/3_mltree/Q86YA3.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 526 / 42080 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -438113.918300 [00:00:00 -438113.918300] Initial branch length optimization [00:00:04 -424031.023195] Model parameter optimization (eps = 0.100000) [00:02:22] Tree #1, final logLikelihood: -422191.761104 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.081834,0.272979) (0.070071,0.245023) (0.345380,0.622328) (0.502715,1.483052) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/4_raxmlng_ancestral/Q86YA3.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/4_raxmlng_ancestral/Q86YA3.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/4_raxmlng_ancestral/Q86YA3.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q86YA3/4_raxmlng_ancestral/Q86YA3.raxml.log Analysis started: 12-Jul-2021 18:23:23 / finished: 12-Jul-2021 18:26:05 Elapsed time: 161.924 seconds Consumed energy: 8.880 Wh