RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 14:06:47 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/2_msa/Q86UE8_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/3_mltree/Q86UE8.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/4_raxmlng_ancestral/Q86UE8 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622804807 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/2_msa/Q86UE8_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 772 sites WARNING: Sequences tr_M3XP14_M3XP14_MUSPF_9669 and tr_A0A2Y9JQ03_A0A2Y9JQ03_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YUP6_M3YUP6_MUSPF_9669 and tr_F1P773_F1P773_CANLF_9615 are exactly identical! WARNING: Sequences tr_B7Z126_B7Z126_DROME_7227 and tr_B4I153_B4I153_DROSE_7238 are exactly identical! WARNING: Sequences tr_G1QZX5_G1QZX5_NOMLE_61853 and tr_A0A2I3TAK1_A0A2I3TAK1_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QZX5_G1QZX5_NOMLE_61853 and sp_Q9UKI8_TLK1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QZX5_G1QZX5_NOMLE_61853 and tr_A0A2K5ZHQ5_A0A2K5ZHQ5_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QZX5_G1QZX5_NOMLE_61853 and tr_A0A2R8ZLZ0_A0A2R8ZLZ0_PANPA_9597 are exactly identical! WARNING: Sequences tr_B6Q8T9_B6Q8T9_TALMQ_441960 and tr_A0A093VLK8_A0A093VLK8_TALMA_1077442 are exactly identical! WARNING: Sequences tr_B2WML2_B2WML2_PYRTR_426418 and tr_A0A2W1EBM7_A0A2W1EBM7_9PLEO_45151 are exactly identical! WARNING: Sequences tr_D8SCF4_D8SCF4_SELML_88036 and tr_D8SGN2_D8SGN2_SELML_88036 are exactly identical! WARNING: Sequences tr_G2X7N1_G2X7N1_VERDV_498257 and tr_A0A0G4MKB2_A0A0G4MKB2_9PEZI_100787 are exactly identical! WARNING: Sequences tr_C0NME1_C0NME1_AJECG_447093 and tr_F0U9F9_F0U9F9_AJEC8_544711 are exactly identical! WARNING: Sequences tr_B8NC05_B8NC05_ASPFN_332952 and tr_Q2TZA2_Q2TZA2_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8NC05_B8NC05_ASPFN_332952 and tr_A0A1S9DE53_A0A1S9DE53_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_F1PUB2_F1PUB2_CANLF_9615 and tr_G1LQ41_G1LQ41_AILME_9646 are exactly identical! WARNING: Sequences tr_F1PUB2_F1PUB2_CANLF_9615 and tr_A0A2U3WGB7_A0A2U3WGB7_ODORO_9708 are exactly identical! WARNING: Sequences tr_W5PRJ0_W5PRJ0_SHEEP_9940 and tr_E1BBU6_E1BBU6_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F9G0M1_F9G0M1_FUSOF_660025 and tr_A0A0D2XD81_A0A0D2XD81_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9G0M1_F9G0M1_FUSOF_660025 and tr_X0D138_X0D138_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9G0M1_F9G0M1_FUSOF_660025 and tr_A0A2H3TNX6_A0A2H3TNX6_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9G0M1_F9G0M1_FUSOF_660025 and tr_A0A2H3H4T8_A0A2H3H4T8_FUSOX_327505 are exactly identical! WARNING: Sequences tr_A0A096MK96_A0A096MK96_RAT_10116 and tr_A0A0G2K920_A0A0G2K920_RAT_10116 are exactly identical! WARNING: Sequences tr_A0A088AGM9_A0A088AGM9_APIME_7460 and tr_A0A2A3E8Q7_A0A2A3E8Q7_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NF33_A0A158NF33_ATTCE_12957 and tr_A0A151WHU7_A0A151WHU7_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NF33_A0A158NF33_ATTCE_12957 and tr_A0A195E8B0_A0A195E8B0_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NF33_A0A158NF33_ATTCE_12957 and tr_A0A195AV26_A0A195AV26_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NF33_A0A158NF33_ATTCE_12957 and tr_A0A195FLT3_A0A195FLT3_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A158NF33_A0A158NF33_ATTCE_12957 and tr_A0A195C628_A0A195C628_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A0E0GTT2_A0A0E0GTT2_ORYNI_4536 and tr_B8AJW4_B8AJW4_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0GTT2_A0A0E0GTT2_ORYNI_4536 and tr_I1PFI4_I1PFI4_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0GTT2_A0A0E0GTT2_ORYNI_4536 and tr_A0A0E0P1C6_A0A0E0P1C6_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0GTT2_A0A0E0GTT2_ORYNI_4536 and tr_A0A0D3FP43_A0A0D3FP43_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0GTT2_A0A0E0GTT2_ORYNI_4536 and tr_Q10CU2_Q10CU2_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A2QKG1_A2QKG1_ASPNC_425011 and tr_G3XV44_G3XV44_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2QKG1_A2QKG1_ASPNC_425011 and tr_A0A319A827_A0A319A827_9EURO_1450533 are exactly identical! WARNING: Sequences tr_A0A1D5Q2V1_A0A1D5Q2V1_MACMU_9544 and tr_U3FFG7_U3FFG7_CALJA_9483 are exactly identical! WARNING: Sequences tr_F6U958_F6U958_MACMU_9544 and tr_G7PV36_G7PV36_MACFA_9541 are exactly identical! WARNING: Sequences tr_G7XHD1_G7XHD1_ASPKW_1033177 and tr_A0A124BZ11_A0A124BZ11_ASPNG_5061 are exactly identical! WARNING: Sequences tr_G7XHD1_G7XHD1_ASPKW_1033177 and tr_A0A146FYK5_A0A146FYK5_9EURO_1069201 are exactly identical! WARNING: Sequences tr_G7XHD1_G7XHD1_ASPKW_1033177 and tr_A0A1L9MUK7_A0A1L9MUK7_ASPTU_767770 are exactly identical! WARNING: Sequences tr_G7XHD1_G7XHD1_ASPKW_1033177 and tr_A0A317UUV0_A0A317UUV0_9EURO_1448314 are exactly identical! WARNING: Sequences tr_F9XC02_F9XC02_ZYMTI_336722 and tr_A0A0F4GSJ7_A0A0F4GSJ7_9PEZI_1047168 are exactly identical! WARNING: Sequences tr_F9XC02_F9XC02_ZYMTI_336722 and tr_A0A1X7RTM8_A0A1X7RTM8_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_G2Y2K8_G2Y2K8_BOTF4_999810 and tr_M7URE1_M7URE1_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_A0A287AM68_A0A287AM68_PIG_9823 and tr_A0A2U4C3G7_A0A2U4C3G7_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A287AM68_A0A287AM68_PIG_9823 and tr_A0A2Y9T891_A0A2Y9T891_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M2T6D3_M2T6D3_COCSN_665912 and tr_W6YDI8_W6YDI8_COCCA_930089 are exactly identical! WARNING: Sequences tr_V2XJC5_V2XJC5_MONRO_1381753 and tr_A0A0W0FR19_A0A0W0FR19_9AGAR_221103 are exactly identical! WARNING: Sequences tr_A0A010QFG7_A0A010QFG7_9PEZI_1445577 and tr_A0A135V7G9_A0A135V7G9_9PEZI_1209931 are exactly identical! WARNING: Sequences tr_A0A067E2P1_A0A067E2P1_CITSI_2711 and tr_V4S9Z6_V4S9Z6_9ROSI_85681 are exactly identical! WARNING: Sequences tr_A0A074X2C6_A0A074X2C6_9PEZI_1043004 and tr_A0A074XCH8_A0A074XCH8_AURPU_1043002 are exactly identical! WARNING: Sequences tr_A0A096P6B3_A0A096P6B3_PAPAN_9555 and tr_A0A0D9QV25_A0A0D9QV25_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096P6B3_A0A096P6B3_PAPAN_9555 and tr_A0A2K5MYV5_A0A2K5MYV5_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096P6B3_A0A096P6B3_PAPAN_9555 and tr_A0A2K6D6M7_A0A2K6D6M7_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A094GP96_A0A094GP96_9PEZI_1420912 and tr_A0A1B8GDE2_A0A1B8GDE2_9PEZI_342668 are exactly identical! WARNING: Sequences tr_V4UD47_V4UD47_9ROSI_85681 and tr_A0A2H5Q7Q2_A0A2H5Q7Q2_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A0B4I4Q1_A0A0B4I4Q1_METMF_1276143 and tr_A0A0D9NUF2_A0A0D9NUF2_METAN_1291518 are exactly identical! WARNING: Sequences tr_A0A0D2QJM1_A0A0D2QJM1_GOSRA_29730 and tr_A0A1U8LUV2_A0A1U8LUV2_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0D2R5C7_A0A0D2R5C7_GOSRA_29730 and tr_A0A1U8IVT1_A0A1U8IVT1_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0A1P330_A0A0A1P330_9FUNG_58291 and tr_A0A367J7X0_A0A367J7X0_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A091K1B8_A0A091K1B8_EGRGA_188379 and tr_A0A091UW16_A0A091UW16_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091K1B8_A0A091K1B8_EGRGA_188379 and tr_A0A091W5Z0_A0A091W5Z0_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091K1B8_A0A091K1B8_EGRGA_188379 and tr_A0A091HLA5_A0A091HLA5_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A0V1CRK6_A0A0V1CRK6_TRIBR_45882 and tr_A0A0V1NX24_A0A0V1NX24_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1CRK6_A0A0V1CRK6_TRIBR_45882 and tr_A0A0V0U367_A0A0V0U367_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3IQC0_A0A1S3IQC0_LINUN_7574 and tr_A0A1S3IW67_A0A1S3IW67_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1B8ACL3_A0A1B8ACL3_FUSPO_36050 and tr_A0A2L2SZJ5_A0A2L2SZJ5_9HYPO_56646 are exactly identical! WARNING: Sequences tr_A0A2G2YH78_A0A2G2YH78_CAPAN_4072 and tr_A0A2G3BAE7_A0A2G3BAE7_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2K5LJ11_A0A2K5LJ11_CERAT_9531 and tr_A0A2K6AZP7_A0A2K6AZP7_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2U4ABI6_A0A2U4ABI6_TURTR_9739 and tr_A0A2Y9MXU2_A0A2Y9MXU2_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4ABI6_A0A2U4ABI6_TURTR_9739 and tr_A0A384A7J9_A0A384A7J9_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 71 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/4_raxmlng_ancestral/Q86UE8.raxml.reduced.phy Alignment comprises 1 partitions and 772 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 772 Gaps: 38.02 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/4_raxmlng_ancestral/Q86UE8.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/3_mltree/Q86UE8.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 193 / 15440 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -235758.635992 [00:00:00 -235758.635992] Initial branch length optimization [00:00:01 -231835.241844] Model parameter optimization (eps = 0.100000) [00:01:03] Tree #1, final logLikelihood: -230974.704362 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.092134,0.248897) (0.097307,0.260478) (0.340353,0.671563) (0.470206,1.537949) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/4_raxmlng_ancestral/Q86UE8.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/4_raxmlng_ancestral/Q86UE8.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/4_raxmlng_ancestral/Q86UE8.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q86UE8/4_raxmlng_ancestral/Q86UE8.raxml.log Analysis started: 04-Jun-2021 14:06:47 / finished: 04-Jun-2021 14:07:57 Elapsed time: 70.212 seconds