RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 14:13:53 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/2_msa/Q71U36_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/3_mltree/Q71U36.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/4_raxmlng_ancestral/Q71U36 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622805233 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/2_msa/Q71U36_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 451 sites WARNING: Sequences tr_B4QVZ6_B4QVZ6_DROSI_7240 and sp_P06604_TBA2_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QVZ6_B4QVZ6_DROSI_7240 and tr_B4HJU7_B4HJU7_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and sp_P06603_TBA1_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_B4JHW4_B4JHW4_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_B4I4N6_B4I4N6_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_Q294S5_Q294S5_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_B4NKL9_B4NKL9_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_B3LYC5_B3LYC5_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_B4LZC9_B4LZC9_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_B4KDS3_B4KDS3_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_A0A0L0BWD3_A0A0L0BWD3_LUCCU_7375 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_A0A0M4F580_A0A0M4F580_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4QYZ8_B4QYZ8_DROSI_7240 and tr_A0A1W4VLS5_A0A1W4VLS5_DROFC_30025 are exactly identical! WARNING: Sequences tr_B4QZP1_B4QZP1_DROSI_7240 and tr_B4I4V3_B4I4V3_DROSE_7238 are exactly identical! WARNING: Sequences tr_E9GAI9_E9GAI9_DAPPU_6669 and tr_A0A0P6I8S3_A0A0P6I8S3_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E2AGM0_E2AGM0_CAMFO_104421 and tr_A0A026W2C7_A0A026W2C7_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_B8A518_B8A518_DANRE_7955 and tr_A0A3B1IPQ6_A0A3B1IPQ6_ASTMX_7994 are exactly identical! WARNING: Sequences tr_B8A518_B8A518_DANRE_7955 and tr_A0A2D0PMB4_A0A2D0PMB4_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6NWK7_Q6NWK7_DANRE_7955 and tr_A0A2I4CDD9_A0A2I4CDD9_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q6NWK7_Q6NWK7_DANRE_7955 and tr_A0A2D0PIZ8_A0A2D0PIZ8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6NWK7_Q6NWK7_DANRE_7955 and tr_A0A2D0SIS1_A0A2D0SIS1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and sp_P68369_TBA1A_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_G3RQF7_G3RQF7_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_A0A2J8SYL4_A0A2J8SYL4_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_H9GMK9_H9GMK9_ANOCA_28377 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_G1U466_G1U466_RABIT_9986 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and sp_A5A6J1_TBA1A_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_F6ZSB4_F6ZSB4_HORSE_9796 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and sp_P68370_TBA1A_RAT_10116 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and sp_Q71U36_TBA1A_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_F6Y0X7_F6Y0X7_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_F6YT71_F6YT71_XENTR_8364 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_F2Z4C1_F2Z4C1_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_A0A0D9R1G1_A0A0D9R1G1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_A0A1S3FCQ1_A0A1S3FCQ1_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_A0A2Y9KUV7_A0A2Y9KUV7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A1D5NW27_A0A1D5NW27_CHICK_9031 and tr_A0A2Y9N9A2_A0A2Y9N9A2_DELLE_9749 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_G3RMA0_G3RMA0_GORGO_9595 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_H9H781_H9H781_MONDO_13616 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and sp_Q6P9V9_TBA1B_RAT_10116 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_H0VMS2_H0VMS2_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and sp_P68363_TBA1B_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A1D5Q9B4_A0A1D5Q9B4_MACMU_9544 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_K9J826_K9J826_XENTR_8364 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and sp_Q2XVP4_TBA1B_PIG_9823 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and sp_P81947_TBA1B_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A2I2U1Y7_A0A2I2U1Y7_FELCA_9685 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A1S3A312_A0A1S3A312_ERIEU_9365 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A1U7UT74_A0A1U7UT74_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A2K5MYJ3_A0A2K5MYJ3_CERAT_9531 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A2R9CC67_A0A2R9CC67_PANPA_9597 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A2U4BA44_A0A2U4BA44_TURTR_9739 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A2Y9KPQ1_A0A2Y9KPQ1_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P05213_TBA1B_MOUSE_10090 and tr_A0A384D7L1_A0A384D7L1_URSMA_29073 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_M3XX31_M3XX31_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_M3ZBN8_M3ZBN8_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_G3RBT2_G3RBT2_GORGO_9595 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2J8R7L3_A0A2J8R7L3_PONAB_9601 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_G1KAW4_G1KAW4_ANOCA_28377 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_G1U031_G1U031_RABIT_9986 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_J9NXT1_J9NXT1_CANLF_9615 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_G2HFQ0_G2HFQ0_PANTR_9598 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_F6V4Z9_F6V4Z9_MONDO_13616 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and sp_Q68FR8_TBA3_RAT_10116 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_H0VZ17_H0VZ17_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and sp_P0DPH7_TBA3C_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and sp_P0DPH8_TBA3D_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_F7H3X6_F7H3X6_MACMU_9544 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_F2Z4K0_F2Z4K0_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A0D9RWH9_A0A0D9RWH9_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2K5KPS1_A0A2K5KPS1_CERAT_9531 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2K6D2H7_A0A2K6D2H7_MACNE_9545 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2K5Z4G6_A0A2K5Z4G6_MANLE_9568 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2R9A341_A0A2R9A341_PANPA_9597 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2U3VYD5_A0A2U3VYD5_ODORO_9708 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2U3YLF9_A0A2U3YLF9_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2Y9IQW7_A0A2Y9IQW7_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A2Y9LNY1_A0A2Y9LNY1_DELLE_9749 are exactly identical! WARNING: Sequences sp_P05214_TBA3_MOUSE_10090 and tr_A0A384CMW3_A0A384CMW3_URSMA_29073 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_G1RDQ0_G1RDQ0_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2I2YM80_A0A2I2YM80_GORGO_9595 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_H2P8P0_H2P8P0_PONAB_9601 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_G1TR82_G1TR82_RABIT_9986 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_E2RBC3_E2RBC3_CANLF_9615 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_H2QJG6_H2QJG6_PANTR_9598 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_C5ISA2_C5ISA2_SHEEP_9940 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and sp_Q5XIF6_TBA4A_RAT_10116 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_I3NHW3_I3NHW3_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_H0V3I8_H0V3I8_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and sp_P68366_TBA4A_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_F6QRE8_F6QRE8_MACMU_9544 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A286ZNY1_A0A286ZNY1_PIG_9823 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and sp_P81948_TBA4A_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2I2UZ20_A0A2I2UZ20_FELCA_9685 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A0D9R6X5_A0A0D9R6X5_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A1S2ZI83_A0A1S2ZI83_ERIEU_9365 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A1S3GBQ2_A0A1S3GBQ2_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A1U7TVH0_A0A1U7TVH0_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A1U7Q653_A0A1U7Q653_MESAU_10036 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2K5M1H8_A0A2K5M1H8_CERAT_9531 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2K6D749_A0A2K6D749_MACNE_9545 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2K5Y6I3_A0A2K5Y6I3_MANLE_9568 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2R8ZC21_A0A2R8ZC21_PANPA_9597 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2U3W3Z0_A0A2U3W3Z0_ODORO_9708 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2U3YH71_A0A2U3YH71_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2Y9IV09_A0A2Y9IV09_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A2Y9N2F1_A0A2Y9N2F1_DELLE_9749 are exactly identical! WARNING: Sequences sp_P68368_TBA4A_MOUSE_10090 and tr_A0A384C1E6_A0A384C1E6_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YYU1_M3YYU1_MUSPF_9669 and tr_G3T302_G3T302_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M3YYU1_M3YYU1_MUSPF_9669 and tr_F7HZN1_F7HZN1_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YYU1_M3YYU1_MUSPF_9669 and tr_A0A2I3MGK2_A0A2I3MGK2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YYU1_M3YYU1_MUSPF_9669 and tr_A0A091DBI9_A0A091DBI9_FUKDA_885580 are exactly identical! WARNING: Sequences tr_M3YYU1_M3YYU1_MUSPF_9669 and tr_A0A384AKY5_A0A384AKY5_BALAS_310752 are exactly identical! WARNING: Sequences tr_M3Z343_M3Z343_MUSPF_9669 and tr_F6X9E9_F6X9E9_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Z343_M3Z343_MUSPF_9669 and tr_A0A2Y9KVE9_A0A2Y9KVE9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2I3GLJ1_A0A2I3GLJ1_NOMLE_61853 and tr_L7N1L0_L7N1L0_MYOLU_59463 are exactly identical! WARNING: Sequences tr_A0A2I3GLJ1_A0A2I3GLJ1_NOMLE_61853 and tr_A0A2I3M581_A0A2I3M581_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I3GLJ1_A0A2I3GLJ1_NOMLE_61853 and tr_A0A2I0LKI5_A0A2I0LKI5_COLLI_8932 are exactly identical! WARNING: Sequences tr_G1R8S4_G1R8S4_NOMLE_61853 and tr_H2QL76_H2QL76_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1R8S4_G1R8S4_NOMLE_61853 and tr_A0A2R9AU75_A0A2R9AU75_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_G1PRA0_G1PRA0_MYOLU_59463 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_A0A2I3RDC8_A0A2I3RDC8_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_G3T189_G3T189_LOXAF_9785 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_F1RK98_F1RK98_PIG_9823 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_I3LDR2_I3LDR2_PIG_9823 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_G1LX08_G1LX08_AILME_9646 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_G7PH99_G7PH99_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_A0A096NXX2_A0A096NXX2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1RHD8_G1RHD8_NOMLE_61853 and tr_A0A384CLU5_A0A384CLU5_URSMA_29073 are exactly identical! WARNING: Sequences tr_G3H3C6_G3H3C6_CRIGR_10029 and tr_G1TQR3_G1TQR3_RABIT_9986 are exactly identical! WARNING: Sequences tr_G3H3C6_G3H3C6_CRIGR_10029 and tr_A0A1S3WPP2_A0A1S3WPP2_ERIEU_9365 are exactly identical! WARNING: Sequences tr_G3H3C6_G3H3C6_CRIGR_10029 and tr_A0A1S3GFF2_A0A1S3GFF2_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G3H3C6_G3H3C6_CRIGR_10029 and tr_A0A1U7UPZ5_A0A1U7UPZ5_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G3H3C6_G3H3C6_CRIGR_10029 and tr_A0A2Y9LC24_A0A2Y9LC24_DELLE_9749 are exactly identical! WARNING: Sequences tr_G3H3C6_G3H3C6_CRIGR_10029 and tr_A0A384B9H7_A0A384B9H7_BALAS_310752 are exactly identical! WARNING: Sequences tr_G3HWE9_G3HWE9_CRIGR_10029 and tr_L5L1N0_L5L1N0_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G3I6I6_G3I6I6_CRIGR_10029 and tr_I3NCU1_I3NCU1_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G3I6I6_G3I6I6_CRIGR_10029 and tr_A0A3B1JST6_A0A3B1JST6_ASTMX_7994 are exactly identical! WARNING: Sequences tr_G3I6I6_G3I6I6_CRIGR_10029 and tr_A0A1L8HHZ8_A0A1L8HHZ8_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A2I2Y1Q4_A0A2I2Y1Q4_GORGO_9595 and sp_Q9NY65_TBA8_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2Y1Q4_A0A2I2Y1Q4_GORGO_9595 and tr_F7FMA3_F7FMA3_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3SHN3_G3SHN3_GORGO_9595 and tr_K7EUE0_K7EUE0_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3SHN3_G3SHN3_GORGO_9595 and tr_A0A2I3S4F7_A0A2I3S4F7_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3SHN3_G3SHN3_GORGO_9595 and tr_F7GY36_F7GY36_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3SHN3_G3SHN3_GORGO_9595 and tr_A0A2I3LDG7_A0A2I3LDG7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3SHN3_G3SHN3_GORGO_9595 and tr_A0A2K6AGC9_A0A2K6AGC9_MANLE_9568 are exactly identical! WARNING: Sequences tr_K7EUD2_K7EUD2_PONAB_9601 and tr_G7PH73_G7PH73_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1NFQ5_G1NFQ5_MELGA_9103 and tr_L7N0B2_L7N0B2_CANLF_9615 are exactly identical! WARNING: Sequences tr_G1NFQ5_G1NFQ5_MELGA_9103 and tr_F6UF81_F6UF81_ORNAN_9258 are exactly identical! WARNING: Sequences tr_G1NFQ5_G1NFQ5_MELGA_9103 and tr_G3UJK7_G3UJK7_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F6R810_F6R810_HORSE_9796 and tr_F6YDT3_F6YDT3_HORSE_9796 are exactly identical! WARNING: Sequences tr_F6R810_F6R810_HORSE_9796 and tr_F7CD56_F7CD56_HORSE_9796 are exactly identical! WARNING: Sequences tr_F6R810_F6R810_HORSE_9796 and tr_F6RP72_F6RP72_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F7ANC9_F7ANC9_HORSE_9796 and tr_U3JBR7_U3JBR7_FICAL_59894 are exactly identical! WARNING: Sequences tr_F7ANC9_F7ANC9_HORSE_9796 and tr_U3JBS1_U3JBS1_FICAL_59894 are exactly identical! WARNING: Sequences tr_B0XE76_B0XE76_CULQU_7176 and tr_Q16JS3_Q16JS3_AEDAE_7159 are exactly identical! WARNING: Sequences tr_W5QFL1_W5QFL1_SHEEP_9940 and sp_Q2HJ86_TBA1D_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A3B5QRF3_A0A3B5QRF3_XIPMA_8083 and tr_A0A2I4CDF9_A0A2I4CDF9_9TELE_52670 are exactly identical! WARNING: Sequences tr_H9IXX0_H9IXX0_BOMMO_7091 and tr_A0A194QUQ6_A0A194QUQ6_PAPMA_76193 are exactly identical! WARNING: Sequences tr_H9IXX0_H9IXX0_BOMMO_7091 and tr_A0A194PTK6_A0A194PTK6_PAPXU_66420 are exactly identical! WARNING: Sequences tr_H0X0K1_H0X0K1_OTOGA_30611 and tr_A0A2Y9S1A4_A0A2Y9S1A4_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q9BQE3_TBA1C_HUMAN_9606 and tr_A0A0D9R1G2_A0A0D9R1G2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A158PYK1_A0A158PYK1_BRUMA_6279 and tr_A0A1I7VFL7_A0A1I7VFL7_LOALO_7209 are exactly identical! WARNING: Sequences tr_Q7PUE2_Q7PUE2_ANOGA_7165 and tr_Q1HR53_Q1HR53_AEDAE_7159 are exactly identical! WARNING: Sequences tr_A0A212EQM6_A0A212EQM6_DANPL_278856 and tr_A0A0L7KUZ4_A0A0L7KUZ4_9NEOP_104452 are exactly identical! WARNING: Sequences tr_A0A212EQM6_A0A212EQM6_DANPL_278856 and tr_A0A2A4JJT9_A0A2A4JJT9_HELVI_7102 are exactly identical! WARNING: Sequences tr_F4NRM5_F4NRM5_BATDJ_684364 and tr_A0A075AMQ0_A0A075AMQ0_9FUNG_988480 are exactly identical! WARNING: Sequences tr_F4NRM5_F4NRM5_BATDJ_684364 and tr_A0A0L0SZ31_A0A0L0SZ31_ALLMA_578462 are exactly identical! WARNING: Sequences tr_F4NRM5_F4NRM5_BATDJ_684364 and tr_A0A177W7X1_A0A177W7X1_BATDE_403673 are exactly identical! WARNING: Sequences tr_F4NRM5_F4NRM5_BATDJ_684364 and tr_A0A1S8W2W1_A0A1S8W2W1_9FUNG_1357716 are exactly identical! WARNING: Sequences tr_F4NRM5_F4NRM5_BATDJ_684364 and tr_A0A1Y2D1R7_A0A1Y2D1R7_9FUNG_329046 are exactly identical! WARNING: Sequences tr_K7F4P6_K7F4P6_PELSI_13735 and tr_A0A1U7SGG9_A0A1U7SGG9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_H0Z6A3_H0Z6A3_TAEGU_59729 and tr_A0A091FRD3_A0A091FRD3_9AVES_55661 are exactly identical! WARNING: Sequences tr_H0Z6A3_H0Z6A3_TAEGU_59729 and tr_A0A093G9E1_A0A093G9E1_DRYPU_118200 are exactly identical! WARNING: Sequences tr_F4WDI4_F4WDI4_ACREC_103372 and tr_A0A151I0Y5_A0A151I0Y5_9HYME_520822 are exactly identical! WARNING: Sequences tr_B3MX71_B3MX71_DROAN_7217 and tr_A0A1W4VN05_A0A1W4VN05_DROFC_30025 are exactly identical! WARNING: Sequences tr_Q6P8G7_Q6P8G7_XENTR_8364 and tr_Q7ZWQ5_Q7ZWQ5_XENLA_8355 are exactly identical! WARNING: Sequences tr_H3BI79_H3BI79_LATCH_7897 and tr_G7PHS2_G7PHS2_MACFA_9541 are exactly identical! WARNING: Sequences tr_U3JS44_U3JS44_FICAL_59894 and tr_A0A218UC18_A0A218UC18_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A015LEX6_A0A015LEX6_9GLOM_1432141 and tr_A0A2I1EKX1_A0A2I1EKX1_9GLOM_588596 are exactly identical! WARNING: Sequences tr_A0A015LEX6_A0A015LEX6_9GLOM_1432141 and tr_U9TA24_U9TA24_RHIID_747089 are exactly identical! WARNING: Sequences tr_Q1I1D5_Q1I1D5_ONCVO_6282 and tr_A0A182DZD9_A0A182DZD9_ONCOC_42157 are exactly identical! WARNING: Sequences tr_Q1I1D5_Q1I1D5_ONCVO_6282 and tr_A0A182E6E6_A0A182E6E6_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A2I3M908_A0A2I3M908_PAPAN_9555 and tr_A0A2K6AFI5_A0A2K6AFI5_MANLE_9568 are exactly identical! WARNING: Sequences tr_V3ZPL2_V3ZPL2_LOTGI_225164 and tr_V4CBA1_V4CBA1_LOTGI_225164 are exactly identical! WARNING: Sequences tr_V4B157_V4B157_LOTGI_225164 and tr_V4B9L4_V4B9L4_LOTGI_225164 are exactly identical! WARNING: Sequences tr_A0A0K0FUG8_A0A0K0FUG8_STRVS_75913 and tr_A0A0N5BAF3_A0A0N5BAF3_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0L7LGW1_A0A0L7LGW1_9NEOP_104452 and tr_A0A0N1IP51_A0A0N1IP51_PAPMA_76193 are exactly identical! WARNING: Sequences tr_A0A0R3X8R5_A0A0R3X8R5_HYDTA_6205 and tr_A0A0R3W6N5_A0A0R3W6N5_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A0V0RTY2_A0A0V0RTY2_9BILA_6336 and tr_A0A0V1D7Y4_A0A0V1D7Y4_TRIBR_45882 are exactly identical! WARNING: Sequences tr_A0A0V0RTY2_A0A0V0RTY2_9BILA_6336 and tr_A0A0V0VSH7_A0A0V0VSH7_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RTY2_A0A0V0RTY2_9BILA_6336 and tr_A0A0V1ADC9_A0A0V1ADC9_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0WD53_A0A0V0WD53_9BILA_92179 and tr_A0A0V1LRI7_A0A0V1LRI7_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0Z9E5_A0A0V0Z9E5_9BILA_990121 and tr_A0A0V1PEV9_A0A0V1PEV9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0Z9E5_A0A0V0Z9E5_9BILA_990121 and tr_A0A0V0TP77_A0A0V0TP77_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V1ML08_A0A0V1ML08_9BILA_268474 and tr_A0A0V1I7L8_A0A0V1I7L8_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V1MMB6_A0A0V1MMB6_9BILA_268474 and tr_A0A0V1HQ93_A0A0V1HQ93_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A195B9P0_A0A195B9P0_9HYME_520822 and tr_A0A195FCX0_A0A195FCX0_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A195B9P0_A0A195B9P0_9HYME_520822 and tr_A0A151IGX0_A0A151IGX0_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A1Y1V630_A0A1Y1V630_9FUNG_1754191 and tr_A0A1Y1XB88_A0A1Y1XB88_9FUNG_1754192 are exactly identical! WARNING: Sequences tr_A0A226NJ65_A0A226NJ65_CALSU_9009 and tr_A0A226NXQ1_A0A226NXQ1_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226NPD8_A0A226NPD8_CALSU_9009 and tr_A0A226PB04_A0A226PB04_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0PUJ4_A0A2D0PUJ4_ICTPU_7998 and tr_A0A2D0PW74_A0A2D0PW74_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2K5XSL7_A0A2K5XSL7_MANLE_9568 and tr_A0A2U3VZ97_A0A2U3VZ97_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A2J7QX75_A0A2J7QX75_9NEOP_105785 and tr_A0A1B2AS19_A0A1B2AS19_BLAGE_6973 are exactly identical! WARNING: Sequences tr_A0A2U3WEF5_A0A2U3WEF5_ODORO_9708 and tr_A0A2U3YEJ6_A0A2U3YEJ6_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A2Y9RT56_A0A2Y9RT56_TRIMA_127582 and tr_A0A2Y9KPX1_A0A2Y9KPX1_ENHLU_391180 are exactly identical! WARNING: Duplicate sequences found: 207 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/4_raxmlng_ancestral/Q71U36.raxml.reduced.phy Alignment comprises 1 partitions and 451 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 451 Gaps: 0.76 % Invariant sites: 11.09 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/4_raxmlng_ancestral/Q71U36.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/3_mltree/Q71U36.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 113 / 9040 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -44469.362926 [00:00:00 -44469.362926] Initial branch length optimization [00:00:01 -38053.523845] Model parameter optimization (eps = 0.100000) [00:00:39] Tree #1, final logLikelihood: -37682.532058 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.400209,0.282970) (0.418705,0.703129) (0.138921,1.795760) (0.042165,8.131904) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/4_raxmlng_ancestral/Q71U36.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/4_raxmlng_ancestral/Q71U36.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/4_raxmlng_ancestral/Q71U36.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q71U36/4_raxmlng_ancestral/Q71U36.raxml.log Analysis started: 04-Jun-2021 14:13:53 / finished: 04-Jun-2021 14:14:36 Elapsed time: 43.023 seconds