RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 12-Jul-2021 17:40:40 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/2_msa/Q6XUX3_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/3_mltree/Q6XUX3.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/4_raxmlng_ancestral/Q6XUX3 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626100840 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/2_msa/Q6XUX3_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 929 sites WARNING: Sequences tr_D8S3C7_D8S3C7_SELML_88036 and tr_D8S7W1_D8S7W1_SELML_88036 are exactly identical! WARNING: Sequences tr_K4BKS3_K4BKS3_SOLLC_4081 and tr_M1CAB1_M1CAB1_SOLTU_4113 are exactly identical! WARNING: Sequences tr_A0A0E0GQW9_A0A0E0GQW9_ORYNI_4536 and tr_A2XJY2_A2XJY2_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0GQW9_A0A0E0GQW9_ORYNI_4536 and tr_I1PDS2_I1PDS2_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0GQW9_A0A0E0GQW9_ORYNI_4536 and tr_A0A0E0D3Z8_A0A0E0D3Z8_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_A0A0E0GQW9_A0A0E0GQW9_ORYNI_4536 and tr_A0A0D3FLL4_A0A0D3FLL4_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0GTK8_A0A0E0GTK8_ORYNI_4536 and tr_I1PFE7_I1PFE7_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0HIX4_A0A0E0HIX4_ORYNI_4536 and tr_A2Y7U2_A2Y7U2_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0HIX4_A0A0E0HIX4_ORYNI_4536 and tr_I1PY82_I1PY82_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0HIX4_A0A0E0HIX4_ORYNI_4536 and tr_A0A0D3GB69_A0A0D3GB69_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0HIX4_A0A0E0HIX4_ORYNI_4536 and tr_Q6L5F3_Q6L5F3_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_F7BH26_F7BH26_MACMU_9544 and tr_G7NVD5_G7NVD5_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7BH26_F7BH26_MACMU_9544 and tr_A0A2K6DRZ1_A0A2K6DRZ1_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7BH26_F7BH26_MACMU_9544 and tr_A0A2K5Z4A5_A0A2K5Z4A5_MANLE_9568 are exactly identical! WARNING: Sequences tr_A2WT32_A2WT32_ORYSI_39946 and tr_A0A0E0MZU9_A0A0E0MZU9_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A2WT32_A2WT32_ORYSI_39946 and tr_Q8LQ53_Q8LQ53_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_I1NQ10_I1NQ10_ORYGL_4538 and tr_A0A0D9YC79_A0A0D9YC79_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0NYN0_A0A0E0NYN0_ORYRU_4529 and tr_Q75J49_Q75J49_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A0A0E0PRM9_A0A0E0PRM9_ORYRU_4529 and tr_A0A0E0A366_A0A0E0A366_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_M4C8S7_M4C8S7_BRARP_51351 and tr_W8RGQ3_W8RGQ3_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4CU44_M4CU44_BRARP_51351 and tr_A0A078IX70_A0A078IX70_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4E4V7_M4E4V7_BRARP_51351 and tr_A0A078J0M8_A0A078J0M8_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4E4V7_M4E4V7_BRARP_51351 and tr_A0A0D3ABI1_A0A0D3ABI1_BRAOL_109376 are exactly identical! WARNING: Sequences tr_M4EYM9_M4EYM9_BRARP_51351 and tr_V9LY60_V9LY60_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4EYM9_M4EYM9_BRARP_51351 and tr_A0A0D3CH42_A0A0D3CH42_BRAOL_109376 are exactly identical! WARNING: Sequences tr_M4F7K6_M4F7K6_BRARP_51351 and tr_A0A078F958_A0A078F958_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4F7U1_M4F7U1_BRARP_51351 and tr_A0A078J1L3_A0A078J1L3_BRANA_3708 are exactly identical! WARNING: Sequences tr_W2PW01_W2PW01_PHYPN_761204 and tr_W2KRX8_W2KRX8_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A015ICU0_A0A015ICU0_9GLOM_1432141 and tr_A0A2H5RIX2_A0A2H5RIX2_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015IFM8_A0A015IFM8_9GLOM_1432141 and tr_A0A2H5TXF6_A0A2H5TXF6_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015IL66_A0A015IL66_9GLOM_1432141 and tr_A0A2H5RGP3_A0A2H5RGP3_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015IRF2_A0A015IRF2_9GLOM_1432141 and tr_A0A2H5SKZ0_A0A2H5SKZ0_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015J3R3_A0A015J3R3_9GLOM_1432141 and tr_A0A2H5R2R8_A0A2H5R2R8_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015JCS0_A0A015JCS0_9GLOM_1432141 and tr_A0A2H5TX81_A0A2H5TX81_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015JEG5_A0A015JEG5_9GLOM_1432141 and tr_A0A2H5R2Z1_A0A2H5R2Z1_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015JS95_A0A015JS95_9GLOM_1432141 and tr_A0A2H5RGR6_A0A2H5RGR6_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015JTA5_A0A015JTA5_9GLOM_1432141 and tr_A0A2H5RQV9_A0A2H5RQV9_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015K0W5_A0A015K0W5_9GLOM_1432141 and tr_A0A2H5TF15_A0A2H5TF15_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015K8N5_A0A015K8N5_9GLOM_1432141 and tr_A0A2H5U175_A0A2H5U175_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015KBU3_A0A015KBU3_9GLOM_1432141 and tr_A0A2H5U5G8_A0A2H5U5G8_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015KQL9_A0A015KQL9_9GLOM_1432141 and tr_A0A2H5SFW8_A0A2H5SFW8_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015L4X5_A0A015L4X5_9GLOM_1432141 and tr_A0A2H5S6A0_A0A2H5S6A0_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015L7T6_A0A015L7T6_9GLOM_1432141 and tr_U9SQU7_U9SQU7_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015LEK6_A0A015LEK6_9GLOM_1432141 and tr_A0A2H5TAA0_A0A2H5TAA0_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015LF03_A0A015LF03_9GLOM_1432141 and tr_A0A2H5QZE9_A0A2H5QZE9_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015LFU7_A0A015LFU7_9GLOM_1432141 and tr_A0A2H5TCH8_A0A2H5TCH8_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015LLN3_A0A015LLN3_9GLOM_1432141 and tr_A0A2H5R906_A0A2H5R906_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015LMQ0_A0A015LMQ0_9GLOM_1432141 and tr_A0A2H5RDM9_A0A2H5RDM9_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015LZ87_A0A015LZ87_9GLOM_1432141 and tr_A0A2H5R2U8_A0A2H5R2U8_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015M1L6_A0A015M1L6_9GLOM_1432141 and tr_A0A2H5TB01_A0A2H5TB01_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015MDB2_A0A015MDB2_9GLOM_1432141 and tr_A0A2H5SQH6_A0A2H5SQH6_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015N4G0_A0A015N4G0_9GLOM_1432141 and tr_A0A2H5R2D0_A0A2H5R2D0_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015N738_A0A015N738_9GLOM_1432141 and tr_A0A2H5T601_A0A2H5T601_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A067G7A6_A0A067G7A6_CITSI_2711 and tr_A0A2H5Q133_A0A2H5Q133_CITUN_55188 are exactly identical! WARNING: Sequences tr_V4U6L8_V4U6L8_9ROSI_85681 and tr_A0A2H5P2Y6_A0A2H5P2Y6_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A0D2P4R3_A0A0D2P4R3_GOSRA_29730 and tr_A0A1U8JY54_A0A1U8JY54_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0D2QSC7_A0A0D2QSC7_GOSRA_29730 and tr_A0A1U8L2W6_A0A1U8L2W6_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0L9VNY1_A0A0L9VNY1_PHAAN_3914 and tr_A0A1S3VB44_A0A1S3VB44_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A1S3YCC6_A0A1S3YCC6_TOBAC_4097 and tr_A0A1U7YH29_A0A1U7YH29_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S3ZGY5_A0A1S3ZGY5_TOBAC_4097 and tr_A0A1U7YPC1_A0A1U7YPC1_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4A4B3_A0A1S4A4B3_TOBAC_4097 and tr_A0A1U7YIU1_A0A1U7YIU1_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4ATC7_A0A1S4ATC7_TOBAC_4097 and tr_A0A1J6ICX3_A0A1J6ICX3_NICAT_49451 are exactly identical! WARNING: Sequences tr_A0A1U8H4L3_A0A1U8H4L3_CAPAN_4072 and tr_A0A2G3C9N3_A0A2G3C9N3_CAPCH_80379 are exactly identical! WARNING: Duplicate sequences found: 63 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/4_raxmlng_ancestral/Q6XUX3.raxml.reduced.phy Alignment comprises 1 partitions and 929 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 929 Gaps: 57.16 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/4_raxmlng_ancestral/Q6XUX3.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/3_mltree/Q6XUX3.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 233 / 18640 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -228732.413563 [00:00:00 -228732.413563] Initial branch length optimization [00:00:02 -221753.693389] Model parameter optimization (eps = 0.100000) [00:01:23] Tree #1, final logLikelihood: -221001.305511 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.112926,0.367367) (0.086853,0.301190) (0.428287,0.674161) (0.371935,1.730469) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/4_raxmlng_ancestral/Q6XUX3.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/4_raxmlng_ancestral/Q6XUX3.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/4_raxmlng_ancestral/Q6XUX3.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q6XUX3/4_raxmlng_ancestral/Q6XUX3.raxml.log Analysis started: 12-Jul-2021 17:40:40 / finished: 12-Jul-2021 17:42:13 Elapsed time: 92.843 seconds Consumed energy: 5.878 Wh