RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 03-Jul-2021 18:46:05 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/2_msa/Q16650_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/3_mltree/Q16650 --seed 2 --threads 4 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/2_msa/Q16650_trimmed_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 179 sites WARNING: Sequences tr_B4QQQ1_B4QQQ1_DROSI_7240 and sp_P55965_BYN_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QQQ1_B4QQQ1_DROSI_7240 and tr_B4HF18_B4HF18_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QQQ1_B4QQQ1_DROSI_7240 and tr_A0A1W4W6F5_A0A1W4W6F5_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9FYB6_E9FYB6_DAPPU_6669 and tr_A0A162CNP9_A0A162CNP9_9CRUS_35525 are exactly identical! WARNING: Sequences tr_B5DE34_B5DE34_DANRE_7955 and tr_W5KRQ4_W5KRQ4_ASTMX_7994 are exactly identical! WARNING: Sequences tr_B8JKS6_B8JKS6_DANRE_7955 and tr_G3PX20_G3PX20_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q98TU2_Q98TU2_DANRE_7955 and tr_H2LAG9_H2LAG9_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q98TU2_Q98TU2_DANRE_7955 and tr_M3ZE93_M3ZE93_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q98TU2_Q98TU2_DANRE_7955 and tr_A0A087XKX4_A0A087XKX4_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and sp_O73718_TBX3_CHICK_9031 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_H9H1Q8_H9H1Q8_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_G3VNU1_G3VNU1_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_U3JZC9_U3JZC9_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A151N4S6_A0A151N4S6_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A0Q3TRC3_A0A0Q3TRC3_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A091F9X8_A0A091F9X8_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A091W2A3_A0A091W2A3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A093H4B3_A0A093H4B3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A3Q0FQS0_A0A3Q0FQS0_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A1V4JRL7_A0A1V4JRL7_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A218V2P6_A0A218V2P6_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A226MNG5_A0A226MNG5_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A226P9A9_A0A226P9A9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and sp_Q64336_TBR1_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_M3XN95_M3XN95_MUSPF_9669 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_G3RS35_G3RS35_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_H2P7N0_H2P7N0_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_G1SPV6_G1SPV6_RABIT_9986 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_E2RL09_E2RL09_CANLF_9615 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_H2R3Y6_H2R3Y6_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_F6YLI5_F6YLI5_MONDO_13616 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_W5P9I1_W5P9I1_SHEEP_9940 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_I3NBE7_I3NBE7_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_H0WQZ0_H0WQZ0_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and sp_Q16650_TBR1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_K7F9G7_K7F9G7_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_G3T7P5_G3T7P5_LOXAF_9785 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_G3WVW3_G3WVW3_SARHA_9305 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_F6UNF8_F6UNF8_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_F1RPQ4_F1RPQ4_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_G1M109_G1M109_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_G7PKN8_G7PKN8_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_E1BK81_E1BK81_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_L5JZ86_L5JZ86_PTEAL_9402 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A337SM91_A0A337SM91_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_U3JPF3_U3JPF3_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A096MY32_A0A096MY32_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A091CWA0_A0A091CWA0_FUKDA_885580 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A0D9RT01_A0A0D9RT01_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A151M098_A0A151M098_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2I0MIS6_A0A2I0MIS6_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A1S2ZSF1_A0A1S2ZSF1_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A1S3G5C7_A0A1S3G5C7_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A3Q0DP43_A0A3Q0DP43_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A1U7RI06_A0A1U7RI06_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A1U8BWV8_A0A1U8BWV8_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A1V4K695_A0A1V4K695_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A218VAX7_A0A218VAX7_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A226NPL5_A0A226NPL5_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A226PBE1_A0A226PBE1_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2K5LMC7_A0A2K5LMC7_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2K6BDW0_A0A2K6BDW0_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2U4AAP3_A0A2U4AAP3_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2U3WMK7_A0A2U3WMK7_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2U3XX11_A0A2U3XX11_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2Y9DJA9_A0A2Y9DJA9_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2Y9J853_A0A2Y9J853_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2Y9N8K5_A0A2Y9N8K5_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A2Y9SP41_A0A2Y9SP41_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A384BU77_A0A384BU77_URSMA_29073 are exactly identical! WARNING: Sequences tr_A0A1D5P6N0_A0A1D5P6N0_CHICK_9031 and tr_A0A384A7Y6_A0A384A7Y6_BALAS_310752 are exactly identical! WARNING: Sequences tr_F1NR88_F1NR88_CHICK_9031 and sp_P79778_TBX19_CHICK_9031 are exactly identical! WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_G1N6N4_G1N6N4_MELGA_9103 are exactly identical! WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_U3JSE6_U3JSE6_FICAL_59894 are exactly identical! WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_U3IMS3_U3IMS3_ANAPL_8839 are exactly identical! WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A151N615_A0A151N615_ALLMI_8496 are exactly identical! WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A218UUH3_A0A218UUH3_9PASE_299123 are exactly identical! WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A226NBM1_A0A226NBM1_CALSU_9009 are exactly identical! WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A226PG36_A0A226PG36_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and sp_P70326_TBX5_MOUSE_10090 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_M3XUD7_M3XUD7_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G1PUU2_G1PUU2_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G3GU42_G3GU42_CRIGR_10029 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G3RD44_G3RD44_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2J8XKH3_A0A2J8XKH3_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G1NCF9_G1NCF9_MELGA_9103 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G1T3X5_G1T3X5_RABIT_9986 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_E2RC42_E2RC42_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H2Q6Y5_H2Q6Y5_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F6Z6Q0_F6Z6Q0_HORSE_9796 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_W5P9H4_W5P9H4_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_I3M1W0_I3M1W0_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H0XEW0_H0XEW0_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H0VRB3_H0VRB3_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and sp_Q99593_TBX5_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F7FPV2_F7FPV2_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G5AKX8_G5AKX8_HETGA_10181 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G3T515_G3T515_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F7I9Q2_F7I9Q2_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F1RKD2_F1RKD2_PIG_9823 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H2ZYZ3_H2ZYZ3_LATCH_7897 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_D2HSK1_D2HSK1_AILME_9646 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F1MP50_F1MP50_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_L5KWD8_L5KWD8_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_M3W4A8_M3W4A8_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_U3JZB8_U3JZB8_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2I3M7F5_A0A2I3M7F5_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A091CVW1_A0A091CVW1_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A0D9S4A3_A0A0D9S4A3_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A151N4K8_A0A151N4K8_ALLMI_8496 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2I0LZ12_A0A2I0LZ12_COLLI_8932 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1S3EZH1_A0A1S3EZH1_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1U7UBD8_A0A1U7UBD8_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A3Q0FNC3_A0A3Q0FNC3_ALLSI_38654 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1U8C6V5_A0A1U8C6V5_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1V4JR48_A0A1V4JR48_PATFA_372326 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A218V2M9_A0A218V2M9_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A226MP22_A0A226MP22_CALSU_9009 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A226P8X2_A0A226P8X2_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2K5LIE8_A0A2K5LIE8_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2K6C115_A0A2K6C115_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2K5YAB5_A0A2K5YAB5_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2R9A5H2_A0A2R9A5H2_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2U3X4Q4_A0A2U3X4Q4_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9DR84_A0A2Y9DR84_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9KP97_A0A2Y9KP97_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9LAN0_A0A2Y9LAN0_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9ELR5_A0A2Y9ELR5_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A384BX27_A0A384BX27_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A383Z6Y0_A0A383Z6Y0_BALAS_310752 are exactly identical! WARNING: Sequences tr_R4GH67_R4GH67_CHICK_9031 and tr_U3K3H0_U3K3H0_FICAL_59894 are exactly identical! WARNING: Sequences tr_R4GH67_R4GH67_CHICK_9031 and tr_A0A218UJY5_A0A218UJY5_9PASE_299123 are exactly identical! WARNING: Sequences tr_R4GH67_R4GH67_CHICK_9031 and tr_A0A226NL89_A0A226NL89_CALSU_9009 are exactly identical! WARNING: Sequences tr_R4GH67_R4GH67_CHICK_9031 and tr_A0A226PDF8_A0A226PDF8_COLVI_9014 are exactly identical! WARNING: Sequences sp_A2AWL7_MGAP_MOUSE_10090 and tr_D3ZP58_D3ZP58_RAT_10116 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_M3YKN2_M3YKN2_MUSPF_9669 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_G1QVE0_G1QVE0_NOMLE_61853 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_G3GV98_G3GV98_CRIGR_10029 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_H2PBA9_H2PBA9_PONAB_9601 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_G1SDB7_G1SDB7_RABIT_9986 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_H2QM79_H2QM79_PANTR_9598 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_W5PYI9_W5PYI9_SHEEP_9940 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_I3N3R1_I3N3R1_ICTTR_43179 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_H0Y1T6_H0Y1T6_OTOGA_30611 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_H0V311_H0V311_CAVPO_10141 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and sp_O95936_EOMES_HUMAN_9606 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_G5BNZ7_G5BNZ7_HETGA_10181 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_F7IJC9_F7IJC9_CALJA_9483 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A286ZX47_A0A286ZX47_PIG_9823 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_F1MF18_F1MF18_BOVIN_9913 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_M3W0M2_M3W0M2_FELCA_9685 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A096NDV4_A0A096NDV4_PAPAN_9555 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A1S2ZC09_A0A1S2ZC09_ERIEU_9365 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A1S3G560_A0A1S3G560_DIPOR_10020 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A1U8CGQ5_A0A1U8CGQ5_MESAU_10036 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A2K5L7W9_A0A2K5L7W9_CERAT_9531 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A2K6C7V6_A0A2K6C7V6_MACNE_9545 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A2K5Z7F2_A0A2K5Z7F2_MANLE_9568 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A2R9B3P8_A0A2R9B3P8_PANPA_9597 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A2U3ZS59_A0A2U3ZS59_ODORO_9708 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A2U3YA50_A0A2U3YA50_LEPWE_9713 are exactly identical! WARNING: Sequences sp_O54839_EOMES_MOUSE_10090 and tr_A0A2Y9KNM8_A0A2Y9KNM8_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_M3YUP7_M3YUP7_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1QHV7_G1QHV7_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1PIU7_G1PIU7_MYOLU_59463 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G3H9F0_G3H9F0_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_H2NV87_H2NV87_PONAB_9601 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1T025_G1T025_RABIT_9986 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_E2RHN2_E2RHN2_CANLF_9615 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and sp_Q861Q9_TBX4_CANLF_9615 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_H2QDL4_H2QDL4_PANTR_9598 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_F6WIB7_F6WIB7_HORSE_9796 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_D4A0A2_D4A0A2_RAT_10116 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_I3MDG3_I3MDG3_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_H0WWD4_H0WWD4_OTOGA_30611 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and sp_P57082_TBX4_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_F6ZEH2_F6ZEH2_MACMU_9544 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G5BAX4_G5BAX4_HETGA_10181 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G3SYH1_G3SYH1_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1LQE0_G1LQE0_AILME_9646 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G7PUI0_G7PUI0_MACFA_9541 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_F1MTT6_F1MTT6_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_M3XF21_M3XF21_FELCA_9685 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A096P4Y5_A0A096P4Y5_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A091DJ77_A0A091DJ77_FUKDA_885580 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A1S3WLT2_A0A1S3WLT2_ERIEU_9365 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A1S3EWA4_A0A1S3EWA4_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A3Q0EK02_A0A3Q0EK02_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A3Q0D1Z8_A0A3Q0D1Z8_MESAU_10036 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2K5MRJ4_A0A2K5MRJ4_CERAT_9531 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2K6BSZ7_A0A2K6BSZ7_MACNE_9545 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2K5ZXI5_A0A2K5ZXI5_MANLE_9568 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2R9BRB8_A0A2R9BRB8_PANPA_9597 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2U3ZD31_A0A2U3ZD31_ODORO_9708 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2Y9FXA8_A0A2Y9FXA8_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2Y9JX87_A0A2Y9JX87_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2Y9LHZ8_A0A2Y9LHZ8_DELLE_9749 are exactly identical! WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A384ASQ0_A0A384ASQ0_BALAS_310752 are exactly identical! WARNING: Sequences sp_P70327_TBX6_MOUSE_10090 and tr_G3I4H4_G3I4H4_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P70327_TBX6_MOUSE_10090 and sp_D3ZJK7_TBX6_RAT_10116 are exactly identical! WARNING: Sequences sp_P70327_TBX6_MOUSE_10090 and tr_A0A1U7Q6S9_A0A1U7Q6S9_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_M3YUJ8_M3YUJ8_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G1PIT1_G1PIT1_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and sp_Q863A2_TBX2_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_H2QDL3_H2QDL3_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_F6TQY6_F6TQY6_MONDO_13616 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_I3MDE1_I3MDE1_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_H0XC02_H0XC02_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A286XLX3_A0A286XLX3_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and sp_Q13207_TBX2_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G3SYG4_G3SYG4_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G3WG33_G3WG33_SARHA_9305 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and sp_Q3SA48_TBX2_XENTR_8364 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_F7HXP4_F7HXP4_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_F8SIP4_F8SIP4_PIG_9823 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G1LQG2_G1LQG2_AILME_9646 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_E1BLY0_E1BLY0_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_M3WAL5_M3WAL5_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_U3JSE1_U3JSE1_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A151N6R3_A0A151N6R3_ALLMI_8496 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2I0LYP3_A0A2I0LYP3_COLLI_8932 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A093FYF0_A0A093FYF0_DRYPU_118200 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A1S3EYM0_A0A1S3EYM0_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A3Q0H3P3_A0A3Q0H3P3_ALLSI_38654 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A1U7QXR2_A0A1U7QXR2_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A1V4K216_A0A1V4K216_PATFA_372326 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A218UUQ7_A0A218UUQ7_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A226PHM2_A0A226PHM2_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2R9AHR8_A0A2R9AHR8_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2U3VR80_A0A2U3VR80_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2Y9JWF8_A0A2Y9JWF8_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2Y9LMU1_A0A2Y9LMU1_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2Y9SZP6_A0A2Y9SZP6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3YMD5_M3YMD5_MUSPF_9669 and tr_A0A287B554_A0A287B554_PIG_9823 are exactly identical! WARNING: Sequences tr_M3YMD5_M3YMD5_MUSPF_9669 and tr_A0A2Y9LFN4_A0A2Y9LFN4_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B4I0Z1_B4I0Z1_DROSE_7238 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B5DKZ7_B5DKZ7_DROPS_46245 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B4NP80_B4NP80_DROWI_7260 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_A0A0P8XS48_A0A0P8XS48_DROAN_7217 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B4GTB9_B4GTB9_DROPE_7234 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_A0A0Q9W8M4_A0A0Q9W8M4_DROVI_7244 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B4L5S0_B4L5S0_DROMO_7230 are exactly identical! WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_A0A1W4UPQ3_A0A1W4UPQ3_DROFC_30025 are exactly identical! WARNING: Sequences tr_Q9U8L5_Q9U8L5_DROME_7227 and tr_B4HKK3_B4HKK3_DROSE_7238 are exactly identical! WARNING: Sequences tr_Q9U8L5_Q9U8L5_DROME_7227 and tr_A0A1W4UZH4_A0A1W4UZH4_DROFC_30025 are exactly identical! WARNING: Sequences tr_A0A3B3HTH8_A0A3B3HTH8_ORYLA_8090 and tr_A0A2I4CVW0_A0A2I4CVW0_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_M3ZT55_M3ZT55_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_I3IUF2_I3IUF2_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_H2UNP5_H2UNP5_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_H3CUF7_H3CUF7_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_A0A096LXJ4_A0A096LXJ4_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_A0A2I4D3I5_A0A2I4D3I5_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_A0A3B5Q2X4_A0A3B5Q2X4_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_I3JW95_I3JW95_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_G3PK23_G3PK23_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_A0A087YEN3_A0A087YEN3_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2MQN1_H2MQN1_ORYLA_8090 and tr_I3JQT4_I3JQT4_ORENI_8128 are exactly identical! WARNING: Sequences tr_B4J3A8_B4J3A8_DROGR_7222 and tr_Q2M0Z5_Q2M0Z5_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4J3A8_B4J3A8_DROGR_7222 and tr_B4GQW4_B4GQW4_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4J3A8_B4J3A8_DROGR_7222 and tr_A0A0M4EEW4_A0A0M4EEW4_DROBS_30019 are exactly identical! WARNING: Sequences tr_A0A2I3H9L2_A0A2I3H9L2_NOMLE_61853 and tr_H9GI78_H9GI78_ANOCA_28377 are exactly identical! WARNING: Sequences tr_A0A2I3H9L2_A0A2I3H9L2_NOMLE_61853 and tr_H0Z8I8_H0Z8I8_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A2I3H9L2_A0A2I3H9L2_NOMLE_61853 and tr_A0A2K5ZCU7_A0A2K5ZCU7_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QNB4_G1QNB4_NOMLE_61853 and tr_G3I178_G3I178_CRIGR_10029 are exactly identical! WARNING: Sequences tr_G1QNB4_G1QNB4_NOMLE_61853 and tr_F6T3P8_F6T3P8_HORSE_9796 are exactly identical! WARNING: Sequences tr_G1QNB4_G1QNB4_NOMLE_61853 and tr_H0V6I7_H0V6I7_CAVPO_10141 are exactly identical! WARNING: Sequences tr_G1QNB4_G1QNB4_NOMLE_61853 and tr_A0A0Q3R5R4_A0A0Q3R5R4_AMAAE_12930 are exactly identical! WARNING: Sequences tr_G1QNB4_G1QNB4_NOMLE_61853 and tr_A0A2K5XTN2_A0A2K5XTN2_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QNB4_G1QNB4_NOMLE_61853 and tr_A0A2R8ZNR7_A0A2R8ZNR7_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_G7Q0W1_G7Q0W1_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A096NHQ7_A0A096NHQ7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A0D9R1I0_A0A0D9R1I0_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A1U7UWT1_A0A1U7UWT1_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A2K5KIE3_A0A2K5KIE3_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A2K6ECW9_A0A2K6ECW9_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A2K5YX76_A0A2K5YX76_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_G3QXI2_G3QXI2_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_H2PKU3_H2PKU3_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_H2QU10_H2QU10_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_W5P465_W5P465_SHEEP_9940 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_D4A4W8_D4A4W8_RAT_10116 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_I3N2Z1_I3N2Z1_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_H0WX81_H0WX81_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_H0UW13_H0UW13_CAVPO_10141 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and sp_O15178_TBXT_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_F7ARP2_F7ARP2_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_G5BDY6_G5BDY6_HETGA_10181 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_F7IFD6_F7IFD6_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A287AXH9_A0A287AXH9_PIG_9823 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_G7P486_G7P486_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_F1MR49_F1MR49_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A096NQC3_A0A096NQC3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A091CP56_A0A091CP56_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A0D9RIE3_A0A0D9RIE3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A1U8CFL8_A0A1U8CFL8_MESAU_10036 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A2K5N1Q1_A0A2K5N1Q1_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A2K6DC73_A0A2K6DC73_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A2K5XXF9_A0A2K5XXF9_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A2R9A9Z3_A0A2R9A9Z3_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A2Y9M4D0_A0A2Y9M4D0_DELLE_9749 are exactly identical! WARNING: Sequences tr_G1RLD3_G1RLD3_NOMLE_61853 and tr_A0A2Y9SJ28_A0A2Y9SJ28_PHYCD_9755 are exactly identical! WARNING: Sequences tr_G1RY22_G1RY22_NOMLE_61853 and tr_G3QG71_G3QG71_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RY22_G1RY22_NOMLE_61853 and tr_A0A2I3RJU5_A0A2I3RJU5_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1RY22_G1RY22_NOMLE_61853 and sp_O60806_TBX19_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1RY22_G1RY22_NOMLE_61853 and tr_G8F353_G8F353_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1RY22_G1RY22_NOMLE_61853 and tr_A0A0D9RF87_A0A0D9RF87_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1RY22_G1RY22_NOMLE_61853 and tr_A0A2K6B221_A0A2K6B221_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1RY22_G1RY22_NOMLE_61853 and tr_A0A2R9AKY2_A0A2R9AKY2_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1NVN6_G1NVN6_MYOLU_59463 and tr_A0A091DWV8_A0A091DWV8_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_G3GU43_G3GU43_CRIGR_10029 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_E2RB25_E2RB25_CANLF_9615 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_F6ZHS6_F6ZHS6_HORSE_9796 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_G5AKX9_G5AKX9_HETGA_10181 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_G1L2P7_G1L2P7_AILME_9646 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_E1BK57_E1BK57_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_A0A0D9S4A5_A0A0D9S4A5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1P9L1_G1P9L1_MYOLU_59463 and tr_A0A1S3F1V1_A0A1S3F1V1_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G3H0Z4_G3H0Z4_CRIGR_10029 and tr_G1SR52_G1SR52_RABIT_9986 are exactly identical! WARNING: Sequences tr_G3H0Z4_G3H0Z4_CRIGR_10029 and tr_I3LX46_I3LX46_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G3H0Z4_G3H0Z4_CRIGR_10029 and tr_A0A091DRQ3_A0A091DRQ3_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_H0VLH3_H0VLH3_CAVPO_10141 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_M3WLU5_M3WLU5_FELCA_9685 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_A0A1U7QD66_A0A1U7QD66_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_A0A2U3V108_A0A2U3V108_TURTR_9739 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_A0A2Y9M1D0_A0A2Y9M1D0_DELLE_9749 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_A0A2Y9F446_A0A2Y9F446_PHYCD_9755 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_A0A384CHX9_A0A384CHX9_URSMA_29073 are exactly identical! WARNING: Sequences tr_G3HE57_G3HE57_CRIGR_10029 and tr_A0A383ZBW7_A0A383ZBW7_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2K5TIZ6_A0A2K5TIZ6_GORGO_9595 and sp_A1YF56_TBX6_GORGO_9595 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_H2NVF6_H2NVF6_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_E2R1K9_E2R1K9_CANLF_9615 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_H2QDA5_H2QDA5_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_I3LYX8_I3LYX8_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_H0WTL3_H0WTL3_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and sp_Q9UL17_TBX21_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_F1RWJ2_F1RWJ2_PIG_9823 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_D2H548_D2H548_AILME_9646 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_G7PU59_G7PU59_MACFA_9541 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A096P533_A0A096P533_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A0D9S3M3_A0A0D9S3M3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A1S3GRM1_A0A1S3GRM1_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A2K5KNZ5_A0A2K5KNZ5_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A2K6CRT5_A0A2K6CRT5_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A2K5YRR8_A0A2K5YRR8_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A2R9B265_A0A2R9B265_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A2U3VJR5_A0A2U3VJR5_ODORO_9708 are exactly identical! WARNING: Sequences tr_G3QIG3_G3QIG3_GORGO_9595 and tr_A0A2U3YMK5_A0A2U3YMK5_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q29F60_Q29F60_DROPS_46245 and tr_B4HB12_B4HB12_DROPE_7234 are exactly identical! WARNING: Sequences tr_F6S8U7_F6S8U7_ORNAN_9258 and tr_G3WH98_G3WH98_SARHA_9305 are exactly identical! WARNING: Sequences tr_F7B4E7_F7B4E7_MONDO_13616 and tr_G3X3T0_G3X3T0_SARHA_9305 are exactly identical! WARNING: Sequences tr_W5PSU0_W5PSU0_SHEEP_9940 and tr_Q0V8E2_Q0V8E2_BOVIN_9913 are exactly identical! WARNING: Sequences tr_D3ZCM2_D3ZCM2_RAT_10116 and tr_A0A1U7QYW2_A0A1U7QYW2_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A3B5R1U4_A0A3B5R1U4_XIPMA_8083 and tr_A0A096M5V8_A0A096M5V8_POEFO_48698 are exactly identical! WARNING: Sequences tr_M3ZT30_M3ZT30_XIPMA_8083 and tr_A0A087YPJ8_A0A087YPJ8_POEFO_48698 are exactly identical! WARNING: Sequences tr_M3ZUW0_M3ZUW0_XIPMA_8083 and tr_A0A087YDH1_A0A087YDH1_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AAG0_M4AAG0_XIPMA_8083 and tr_A0A087YHN9_A0A087YHN9_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AAG0_M4AAG0_XIPMA_8083 and tr_A0A2I4BWK3_A0A2I4BWK3_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A158NZS4_A0A158NZS4_ATTCE_12957 are exactly identical! WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A151IXY8_A0A151IXY8_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A195F3M1_A0A195F3M1_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A195CM35_A0A195CM35_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A2A3EAU5_A0A2A3EAU5_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A088AHN1_A0A088AHN1_APIME_7460 and tr_A0A2A3E6F3_A0A2A3E6F3_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NFL4_A0A158NFL4_ATTCE_12957 and tr_F4X0D4_F4X0D4_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NFL4_A0A158NFL4_ATTCE_12957 and tr_A0A026WSZ6_A0A026WSZ6_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_A0A158NFL4_A0A158NFL4_ATTCE_12957 and tr_A0A151J7I2_A0A151J7I2_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NFL4_A0A158NFL4_ATTCE_12957 and tr_A0A195AXV9_A0A195AXV9_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NFL4_A0A158NFL4_ATTCE_12957 and tr_A0A151JY50_A0A151JY50_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A158NFL4_A0A158NFL4_ATTCE_12957 and tr_A0A195D704_A0A195D704_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A287DG54_A0A287DG54_ICTTR_43179 and tr_A0A1S3ETF4_A0A1S3ETF4_DIPOR_10020 are exactly identical! WARNING: Sequences tr_H2SKD4_H2SKD4_TAKRU_31033 and tr_H3DJN2_H3DJN2_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2UNE2_H2UNE2_TAKRU_31033 and tr_H3CUF8_H3CUF8_TETNG_99883 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0S2J6_A0A0V0S2J6_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1D342_A0A0V1D342_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0WIN9_A0A0V0WIN9_9BILA_92179 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0VGY9_A0A0V0VGY9_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1L6A2_A0A0V1L6A2_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1A6P1_A0A0V1A6P1_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0YA78_A0A0V0YA78_TRIPS_6337 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1M7L7_A0A0V1M7L7_9BILA_268474 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1NSI6_A0A0V1NSI6_9BILA_92180 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1H9W2_A0A0V1H9W2_9BILA_268475 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0TYX1_A0A0V0TYX1_9BILA_144512 are exactly identical! WARNING: Sequences tr_Q7Q6E6_Q7Q6E6_ANOGA_7165 and tr_A0A084W2P8_A0A084W2P8_ANOSI_74873 are exactly identical! WARNING: Sequences tr_K7EX20_K7EX20_PELSI_13735 and tr_K7F9V2_K7F9V2_PELSI_13735 are exactly identical! WARNING: Sequences tr_K7GHK4_K7GHK4_PELSI_13735 and tr_W5MCK5_W5MCK5_LEPOC_7918 are exactly identical! WARNING: Sequences tr_G3NQ54_G3NQ54_GASAC_69293 and tr_A0A2U9C9B5_A0A2U9C9B5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H0ZGM8_H0ZGM8_TAEGU_59729 and tr_A0A218V5K0_A0A218V5K0_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0ZT86_H0ZT86_TAEGU_59729 and tr_A0A093QFY2_A0A093QFY2_9PASS_328815 are exactly identical! WARNING: Sequences tr_B4N3Y6_B4N3Y6_DROWI_7260 and tr_B3M4M1_B3M4M1_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4N3Y6_B4N3Y6_DROWI_7260 and tr_B4LF67_B4LF67_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4N3Y6_B4N3Y6_DROWI_7260 and tr_B4KVJ2_B4KVJ2_DROMO_7230 are exactly identical! WARNING: Sequences tr_F6ULJ0_F6ULJ0_XENTR_8364 and tr_A0A1L8H810_A0A1L8H810_XENLA_8355 are exactly identical! WARNING: Sequences tr_F6ULJ0_F6ULJ0_XENTR_8364 and tr_A0A1L8HFV2_A0A1L8HFV2_XENLA_8355 are exactly identical! WARNING: Sequences tr_B3RXS4_B3RXS4_TRIAD_10228 and tr_A0A369SL39_A0A369SL39_9METZ_287889 are exactly identical! WARNING: Sequences tr_B3S6C1_B3S6C1_TRIAD_10228 and tr_A0A369SLS1_A0A369SLS1_9METZ_287889 are exactly identical! WARNING: Sequences tr_B3S6C2_B3S6C2_TRIAD_10228 and tr_A0A369SLL9_A0A369SLL9_9METZ_287889 are exactly identical! WARNING: Sequences sp_E1BEA8_TBX6_BOVIN_9913 and tr_A0A2U3VPZ5_A0A2U3VPZ5_ODORO_9708 are exactly identical! WARNING: Sequences sp_E1BEA8_TBX6_BOVIN_9913 and tr_A0A2U3XRF6_A0A2U3XRF6_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3VVD8_M3VVD8_FELCA_9685 and tr_A0A2U3W100_A0A2U3W100_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3VVD8_M3VVD8_FELCA_9685 and tr_A0A2U3XGU5_A0A2U3XGU5_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3VVD8_M3VVD8_FELCA_9685 and tr_A0A2Y9KRN7_A0A2Y9KRN7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_U3JT50_U3JT50_FICAL_59894 and tr_A0A087QLA0_A0A087QLA0_APTFO_9233 are exactly identical! WARNING: Sequences tr_U3JT50_U3JT50_FICAL_59894 and tr_A0A093HIB1_A0A093HIB1_STRCA_441894 are exactly identical! WARNING: Sequences tr_U3JT50_U3JT50_FICAL_59894 and tr_A0A0A0AYG5_A0A0A0AYG5_CHAVO_50402 are exactly identical! WARNING: Sequences tr_U3JT50_U3JT50_FICAL_59894 and tr_A0A093G610_A0A093G610_DRYPU_118200 are exactly identical! WARNING: Sequences tr_U3JT50_U3JT50_FICAL_59894 and tr_A0A1V4J389_A0A1V4J389_PATFA_372326 are exactly identical! WARNING: Sequences tr_U3JT50_U3JT50_FICAL_59894 and tr_A0A226PVA2_A0A226PVA2_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A3B1IUP9_A0A3B1IUP9_ASTMX_7994 and tr_W5UFJ3_W5UFJ3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A3B1JY53_A0A3B1JY53_ASTMX_7994 and tr_A0A2D0QC04_A0A2D0QC04_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A096N9R7_A0A096N9R7_PAPAN_9555 and tr_A0A2K5M6C3_A0A2K5M6C3_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096N9R7_A0A096N9R7_PAPAN_9555 and tr_A0A2K6AL50_A0A2K6AL50_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0D9RBE1_A0A0D9RBE1_CHLSB_60711 and tr_A0A1U7UFJ8_A0A1U7UFJ8_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A0P7UHK7_A0A0P7UHK7_9TELE_113540 and tr_Q9IBC7_Q9IBC7_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A0K0G2Z8_A0A0K0G2Z8_STRVS_75913 and tr_A0A0K0DZP2_A0A0K0DZP2_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0G2Z8_A0A0K0G2Z8_STRVS_75913 and tr_A0A090LD63_A0A090LD63_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0K0G2Z8_A0A0K0G2Z8_STRVS_75913 and tr_A0A0N5CGR6_A0A0N5CGR6_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A151M2G8_A0A151M2G8_ALLMI_8496 and tr_A0A3Q0FTM4_A0A3Q0FTM4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151MQY6_A0A151MQY6_ALLMI_8496 and tr_A0A1U7S0E3_A0A1U7S0E3_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091EMI4_A0A091EMI4_CORBR_85066 and tr_A0A091FMH6_A0A091FMH6_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091EMI4_A0A091EMI4_CORBR_85066 and tr_A0A093G932_A0A093G932_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091IZM1_A0A091IZM1_EGRGA_188379 and tr_A0A091W8S2_A0A091W8S2_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091IZM1_A0A091IZM1_EGRGA_188379 and tr_A0A087RK10_A0A087RK10_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A194R1I8_A0A194R1I8_PAPMA_76193 and tr_A0A194PX15_A0A194PX15_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A091GAR1_A0A091GAR1_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A0A0AN11_A0A0A0AN11_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A091I0I4_A0A091I0I4_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1S3L083_A0A1S3L083_SALSA_8030 and tr_A0A1S3LJM5_A0A1S3LJM5_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3L083_A0A1S3L083_SALSA_8030 and tr_A0A060W6V2_A0A060W6V2_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3M1C1_A0A1S3M1C1_SALSA_8030 and tr_E8Z504_E8Z504_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3M427_A0A1S3M427_SALSA_8030 and tr_A0A1S3Q036_A0A1S3Q036_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3M427_A0A1S3M427_SALSA_8030 and tr_A0A060WI60_A0A060WI60_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3M427_A0A1S3M427_SALSA_8030 and tr_A0A060XI72_A0A060XI72_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NS74_A0A1S3NS74_SALSA_8030 and tr_A0A1S3T011_A0A1S3T011_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3NS74_A0A1S3NS74_SALSA_8030 and tr_A0A060XMU9_A0A060XMU9_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NS74_A0A1S3NS74_SALSA_8030 and tr_A0A060XX08_A0A060XX08_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NW55_A0A1S3NW55_SALSA_8030 and tr_A0A060VQW8_A0A060VQW8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NW55_A0A1S3NW55_SALSA_8030 and tr_A0A060VSD8_A0A060VSD8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3PYZ9_A0A1S3PYZ9_SALSA_8030 and tr_A0A060W575_A0A060W575_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3PYZ9_A0A1S3PYZ9_SALSA_8030 and tr_J9Q9A0_J9Q9A0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3RK27_A0A1S3RK27_SALSA_8030 and tr_A0A060WTP7_A0A060WTP7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A226MQ93_A0A226MQ93_CALSU_9009 and tr_A0A226NPX4_A0A226NPX4_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226MZZ4_A0A226MZZ4_CALSU_9009 and tr_A0A226PAT9_A0A226PAT9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226M804_A0A226M804_COLVI_9014 and tr_A0A226NS42_A0A226NS42_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2G8JJV7_A0A2G8JJV7_STIJA_307972 and tr_A0A2G8JXT3_A0A2G8JXT3_STIJA_307972 are exactly identical! WARNING: Sequences tr_A0A2U4C9U3_A0A2U4C9U3_TURTR_9739 and tr_A0A2Y9MEE4_A0A2Y9MEE4_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4C9U3_A0A2U4C9U3_TURTR_9739 and tr_A0A2Y9EPC1_A0A2Y9EPC1_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 447 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/3_mltree/Q16650.raxml.reduced.phy Alignment comprises 1 partitions and 179 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 179 / 179 Gaps: 2.21 % Invariant sites: 1.68 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/3_mltree/Q16650.raxml.rba Parallelization scheme autoconfig: 4 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 1001 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 179 / 14320 [00:00:00] Data distribution: max. searches per worker: 5 Starting ML tree search with 20 distinct starting trees [00:00:00 -232099.494962] Initial branch length optimization [00:00:05 -189992.966493] Model parameter optimization (eps = 10.000000) [00:00:43 -189892.014103] AUTODETECT spr round 1 (radius: 5) [00:03:54 -95539.499886] AUTODETECT spr round 2 (radius: 10) [00:07:04 -59796.056920] AUTODETECT spr round 3 (radius: 15) [00:10:06 -43949.902733] AUTODETECT spr round 4 (radius: 20) [00:13:43 -40694.540809] AUTODETECT spr round 5 (radius: 25) [00:17:58 -35640.588202] SPR radius for FAST iterations: 25 (autodetect) [00:17:58 -35640.588202] Model parameter optimization (eps = 3.000000) [00:18:39 -35602.227408] FAST spr round 1 (radius: 25) [00:21:45 -26462.112556] FAST spr round 2 (radius: 25) [00:24:21 -25924.198578] FAST spr round 3 (radius: 25) [00:26:45 -25883.379749] FAST spr round 4 (radius: 25) [00:28:42 -25883.378984] Model parameter optimization (eps = 1.000000) [00:29:03 -25868.794471] SLOW spr round 1 (radius: 5) [00:31:18 -25860.107038] SLOW spr round 2 (radius: 5) [00:33:33 -25859.322750] SLOW spr round 3 (radius: 5) [00:35:41 -25859.319496] SLOW spr round 4 (radius: 10) [00:38:03 -25859.145665] SLOW spr round 5 (radius: 5) [00:40:43 -25851.766063] SLOW spr round 6 (radius: 5) [00:43:04 -25851.765456] SLOW spr round 7 (radius: 10) [00:45:24 -25851.516440] SLOW spr round 8 (radius: 5) [00:47:56 -25851.515851] SLOW spr round 9 (radius: 10) [00:50:23 -25851.515771] SLOW spr round 10 (radius: 15) [00:53:22 -25721.128179] SLOW spr round 11 (radius: 5) [00:56:12 -25666.764229] SLOW spr round 12 (radius: 5) [00:58:44 -25644.239131] SLOW spr round 13 (radius: 5) [01:01:00 -25644.237573] SLOW spr round 14 (radius: 10) [01:03:20 -25644.237368] SLOW spr round 15 (radius: 15) [01:06:17 -25644.237326] SLOW spr round 16 (radius: 20) [01:10:02 -25644.237316] SLOW spr round 17 (radius: 25) [01:14:44 -25644.237313] Model parameter optimization (eps = 0.100000) [01:14:57] [worker #0] ML tree search #1, logLikelihood: -25643.850076 [01:14:58 -230779.991540] Initial branch length optimization [01:15:03 -188585.657570] Model parameter optimization (eps = 10.000000) [01:15:46 -188487.535702] AUTODETECT spr round 1 (radius: 5) [01:16:32] [worker #3] ML tree search #4, logLikelihood: -25658.779358 [01:18:46 -91463.687065] AUTODETECT spr round 2 (radius: 10) [01:21:44 -58751.027507] AUTODETECT spr round 3 (radius: 15) [01:24:48 -46291.634452] AUTODETECT spr round 4 (radius: 20) [01:26:35] [worker #2] ML tree search #3, logLikelihood: -25653.291383 [01:28:18 -35700.510880] AUTODETECT spr round 5 (radius: 25) [01:29:32] [worker #1] ML tree search #2, logLikelihood: -25662.250843 [01:32:12 -31979.290567] SPR radius for FAST iterations: 25 (autodetect) [01:32:12 -31979.290567] Model parameter optimization (eps = 3.000000) [01:32:48 -31930.664426] FAST spr round 1 (radius: 25) [01:35:29 -26301.191157] FAST spr round 2 (radius: 25) [01:37:42 -25798.653484] FAST spr round 3 (radius: 25) [01:39:47 -25718.138199] FAST spr round 4 (radius: 25) [01:41:48 -25704.595225] FAST spr round 5 (radius: 25) [01:43:43 -25703.893877] FAST spr round 6 (radius: 25) [01:45:36 -25703.893354] Model parameter optimization (eps = 1.000000) [01:45:53 -25699.843011] SLOW spr round 1 (radius: 5) [01:48:05 -25691.105384] SLOW spr round 2 (radius: 5) [01:50:17 -25685.532918] SLOW spr round 3 (radius: 5) [01:52:26 -25684.182870] SLOW spr round 4 (radius: 5) [01:54:32 -25684.182570] SLOW spr round 5 (radius: 10) [01:56:52 -25668.548258] SLOW spr round 6 (radius: 5) [01:59:27 -25666.046558] SLOW spr round 7 (radius: 5) [02:01:43 -25666.046358] SLOW spr round 8 (radius: 10) [02:04:01 -25665.572472] SLOW spr round 9 (radius: 5) [02:06:32 -25665.571901] SLOW spr round 10 (radius: 10) [02:08:58 -25665.093148] SLOW spr round 11 (radius: 5) [02:11:28 -25665.091458] SLOW spr round 12 (radius: 10) [02:13:53 -25665.090745] SLOW spr round 13 (radius: 15) [02:16:51 -25664.656074] SLOW spr round 14 (radius: 5) [02:19:31 -25664.655813] SLOW spr round 15 (radius: 10) [02:22:02 -25664.655807] SLOW spr round 16 (radius: 15) [02:24:59 -25664.655804] SLOW spr round 17 (radius: 20) [02:27:21] [worker #2] ML tree search #7, logLikelihood: -25655.276027 [02:29:16 -25664.324892] SLOW spr round 18 (radius: 5) [02:31:53] [worker #3] ML tree search #8, logLikelihood: -25657.502835 [02:32:06 -25662.692083] SLOW spr round 19 (radius: 5) [02:34:35 -25661.267916] SLOW spr round 20 (radius: 5) [02:36:49 -25661.267399] SLOW spr round 21 (radius: 10) [02:39:05 -25661.267329] SLOW spr round 22 (radius: 15) [02:42:10 -25661.267315] SLOW spr round 23 (radius: 20) [02:46:37 -25661.267310] SLOW spr round 24 (radius: 25) [02:52:21 -25651.860256] SLOW spr round 25 (radius: 5) [02:55:10 -25650.318021] SLOW spr round 26 (radius: 5) [02:57:37 -25650.318002] SLOW spr round 27 (radius: 10) [03:00:02 -25650.317999] SLOW spr round 28 (radius: 15) [03:02:59 -25650.317997] SLOW spr round 29 (radius: 20) [03:07:05 -25650.033476] SLOW spr round 30 (radius: 5) [03:09:50 -25650.032739] SLOW spr round 31 (radius: 10) [03:10:08] [worker #1] ML tree search #6, logLikelihood: -25644.971477 [03:12:30 -25648.699327] SLOW spr round 32 (radius: 5) [03:14:59 -25648.697524] SLOW spr round 33 (radius: 10) [03:17:23 -25648.697475] SLOW spr round 34 (radius: 15) [03:20:20 -25648.697469] SLOW spr round 35 (radius: 20) [03:24:31 -25648.697451] SLOW spr round 36 (radius: 25) [03:29:49 -25648.697448] Model parameter optimization (eps = 0.100000) [03:30:02] [worker #0] ML tree search #5, logLikelihood: -25647.227550 [03:30:03 -231688.975546] Initial branch length optimization [03:30:11 -188889.089506] Model parameter optimization (eps = 10.000000) [03:30:57 -188818.031697] AUTODETECT spr round 1 (radius: 5) [03:33:58 -96206.997651] AUTODETECT spr round 2 (radius: 10) [03:36:57 -63734.630686] AUTODETECT spr round 3 (radius: 15) [03:39:56 -49879.510489] AUTODETECT spr round 4 (radius: 20) [03:43:29 -38828.889013] AUTODETECT spr round 5 (radius: 25) [03:46:26] [worker #3] ML tree search #12, logLikelihood: -25658.101782 [03:47:14 -35027.070433] SPR radius for FAST iterations: 25 (autodetect) [03:47:14 -35027.070433] Model parameter optimization (eps = 3.000000) [03:47:40 -34992.500192] FAST spr round 1 (radius: 25) [03:50:28 -27430.063564] FAST spr round 2 (radius: 25) [03:52:44 -25828.601353] FAST spr round 3 (radius: 25) [03:54:50 -25669.727129] FAST spr round 4 (radius: 25) [03:56:51 -25665.977070] FAST spr round 5 (radius: 25) [03:58:51 -25665.976555] Model parameter optimization (eps = 1.000000) [03:59:11 -25657.161845] SLOW spr round 1 (radius: 5) [04:01:25 -25653.166863] SLOW spr round 2 (radius: 5) [04:03:38 -25649.321732] SLOW spr round 3 (radius: 5) [04:05:49 -25649.321645] SLOW spr round 4 (radius: 10) [04:08:12 -25648.715531] SLOW spr round 5 (radius: 5) [04:10:12] [worker #2] ML tree search #11, logLikelihood: -25658.263338 [04:10:46 -25647.324928] SLOW spr round 6 (radius: 5) [04:13:04 -25647.324553] SLOW spr round 7 (radius: 10) [04:15:25 -25647.324461] SLOW spr round 8 (radius: 15) [04:18:21 -25646.285838] SLOW spr round 9 (radius: 5) [04:21:03 -25646.285808] SLOW spr round 10 (radius: 10) [04:21:08] [worker #1] ML tree search #10, logLikelihood: -25652.904367 [04:23:38 -25646.285800] SLOW spr round 11 (radius: 15) [04:26:30 -25646.285798] SLOW spr round 12 (radius: 20) [04:30:14 -25646.285796] SLOW spr round 13 (radius: 25) [04:34:55 -25646.285794] Model parameter optimization (eps = 0.100000) [04:35:05] [worker #0] ML tree search #9, logLikelihood: -25646.108762 [04:35:05 -228594.309992] Initial branch length optimization [04:35:11 -186129.332190] Model parameter optimization (eps = 10.000000) [04:36:02 -186035.901910] AUTODETECT spr round 1 (radius: 5) [04:39:05 -93803.078804] AUTODETECT spr round 2 (radius: 10) [04:42:04 -60773.334073] AUTODETECT spr round 3 (radius: 15) [04:45:08 -43974.024140] AUTODETECT spr round 4 (radius: 20) [04:48:27 -37662.787800] AUTODETECT spr round 5 (radius: 25) [04:52:33 -32973.290229] SPR radius for FAST iterations: 25 (autodetect) [04:52:33 -32973.290229] Model parameter optimization (eps = 3.000000) [04:53:02 -32916.534664] FAST spr round 1 (radius: 25) [04:55:47 -26345.261992] FAST spr round 2 (radius: 25) [04:58:04 -25711.159813] FAST spr round 3 (radius: 25) [05:00:08 -25677.362264] FAST spr round 4 (radius: 25) [05:02:05 -25676.597556] FAST spr round 5 (radius: 25) [05:04:00 -25676.597452] Model parameter optimization (eps = 1.000000) [05:04:10 -25675.992374] SLOW spr round 1 (radius: 5) [05:06:20 -25669.720027] SLOW spr round 2 (radius: 5) [05:08:30 -25668.304395] SLOW spr round 3 (radius: 5) [05:10:43 -25661.909913] SLOW spr round 4 (radius: 5) [05:12:49 -25661.909793] SLOW spr round 5 (radius: 10) [05:15:08 -25661.909716] SLOW spr round 6 (radius: 15) [05:18:10 -25661.909707] SLOW spr round 7 (radius: 20) [05:22:20 -25661.909703] SLOW spr round 8 (radius: 25) [05:27:37 -25661.909700] Model parameter optimization (eps = 0.100000) [05:27:43] [worker #0] ML tree search #13, logLikelihood: -25661.893808 [05:27:43 -232409.980629] Initial branch length optimization [05:27:48 -190996.731565] Model parameter optimization (eps = 10.000000) [05:28:35 -190933.749777] AUTODETECT spr round 1 (radius: 5) [05:29:10] [worker #1] ML tree search #14, logLikelihood: -25660.122340 [05:31:39 -90726.040239] AUTODETECT spr round 2 (radius: 10) [05:33:04] [worker #3] ML tree search #16, logLikelihood: -25681.116284 [05:34:38 -60051.897384] AUTODETECT spr round 3 (radius: 15) [05:37:32 -44168.346323] AUTODETECT spr round 4 (radius: 20) [05:37:36] [worker #2] ML tree search #15, logLikelihood: -25687.654117 [05:40:40 -36511.710290] AUTODETECT spr round 5 (radius: 25) [05:44:06 -33881.746907] SPR radius for FAST iterations: 25 (autodetect) [05:44:06 -33881.746907] Model parameter optimization (eps = 3.000000) [05:44:28 -33827.233301] FAST spr round 1 (radius: 25) [05:47:05 -28947.672916] FAST spr round 2 (radius: 25) [05:49:29 -26246.828762] FAST spr round 3 (radius: 25) [05:51:33 -25726.186478] FAST spr round 4 (radius: 25) [05:53:36 -25672.747842] FAST spr round 5 (radius: 25) [05:55:32 -25669.130330] FAST spr round 6 (radius: 25) [05:57:25 -25669.130277] Model parameter optimization (eps = 1.000000) [05:57:44 -25667.542409] SLOW spr round 1 (radius: 5) [05:59:57 -25660.725294] SLOW spr round 2 (radius: 5) [06:02:08 -25660.346437] SLOW spr round 3 (radius: 5) [06:04:13 -25660.346204] SLOW spr round 4 (radius: 10) [06:06:33 -25659.868343] SLOW spr round 5 (radius: 5) [06:09:06 -25659.867207] SLOW spr round 6 (radius: 10) [06:11:30 -25659.867157] SLOW spr round 7 (radius: 15) [06:14:22 -25659.867141] SLOW spr round 8 (radius: 20) [06:18:09 -25658.827168] SLOW spr round 9 (radius: 5) [06:20:53 -25658.826870] SLOW spr round 10 (radius: 10) [06:23:31 -25656.824004] SLOW spr round 11 (radius: 5) [06:26:07 -25654.652247] SLOW spr round 12 (radius: 5) [06:28:21 -25654.652145] SLOW spr round 13 (radius: 10) [06:30:36 -25654.652020] SLOW spr round 14 (radius: 15) [06:33:27 -25654.652019] SLOW spr round 15 (radius: 20) [06:37:08 -25654.651686] SLOW spr round 16 (radius: 25) [06:39:16] [worker #1] ML tree search #18, logLikelihood: -25646.339283 [06:41:51 -25654.651684] Model parameter optimization (eps = 0.100000) [06:42:00] [worker #0] ML tree search #17, logLikelihood: -25654.260390 [06:53:31] [worker #2] ML tree search #19, logLikelihood: -25659.813034 [07:00:49] [worker #3] ML tree search #20, logLikelihood: -25659.397994 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.248781,0.259961) (0.320107,0.762859) (0.294286,1.071226) (0.136825,2.747176) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -25643.850076 AIC score: 55297.700153 / AICc score: 8099357.700153 / BIC score: 61688.408694 Free parameters (model + branch lengths): 2005 WARNING: Number of free parameters (K=2005) is larger than alignment size (n=179). This might lead to overfitting and compromise tree inference results! Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/3_mltree/Q16650.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/3_mltree/Q16650.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/3_mltree/Q16650.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q16650/3_mltree/Q16650.raxml.log Analysis started: 03-Jul-2021 18:46:05 / finished: 04-Jul-2021 01:46:55 Elapsed time: 25250.141 seconds Consumed energy: 1458.155 Wh (= 7 km in an electric car, or 36 km with an e-scooter!)