RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 02-Jun-2021 18:29:28 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/2_msa/Q15848_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/3_mltree/Q15848.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/4_raxmlng_ancestral/Q15848 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622647768 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/2_msa/Q15848_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 244 sites WARNING: Sequences tr_G3HMN0_G3HMN0_CRIGR_10029 and tr_A0A1U7QM18_A0A1U7QM18_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3IID2_G3IID2_CRIGR_10029 and tr_A0A1U8BXJ7_A0A1U8BXJ7_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3QMG5_G3QMG5_GORGO_9595 and tr_H2N802_H2N802_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QMG5_G3QMG5_GORGO_9595 and tr_H2PZI4_H2PZI4_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QMG5_G3QMG5_GORGO_9595 and sp_P25067_CO8A2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QMG5_G3QMG5_GORGO_9595 and tr_A0A2R9AIY2_A0A2R9AIY2_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QSG2_G3QSG2_GORGO_9595 and tr_H2QRX8_H2QRX8_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R3H0_G3R3H0_GORGO_9595 and sp_P02747_C1QC_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3R3H6_G3R3H6_GORGO_9595 and tr_A0A2I3SM96_A0A2I3SM96_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R3H6_G3R3H6_GORGO_9595 and sp_P02746_C1QB_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_H2RD92_H2RD92_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_F7H1M7_F7H1M7_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_G7NZ83_G7NZ83_MACFA_9541 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_A0A0D9R128_A0A0D9R128_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_A0A2K5NJX4_A0A2K5NJX4_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_A0A2K6BGQ3_A0A2K6BGQ3_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_A0A2K5ZG48_A0A2K5ZG48_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3RE09_G3RE09_GORGO_9595 and tr_A0A2R9C581_A0A2R9C581_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3S3J2_G3S3J2_GORGO_9595 and tr_A0A096NA96_A0A096NA96_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3S3J2_G3S3J2_GORGO_9595 and tr_A0A0D9RT46_A0A0D9RT46_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3S3J2_G3S3J2_GORGO_9595 and tr_A0A2K5L075_A0A2K5L075_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3S3J2_G3S3J2_GORGO_9595 and tr_A0A2K5ZF69_A0A2K5ZF69_MANLE_9568 are exactly identical! WARNING: Sequences tr_H2PCY3_H2PCY3_PONAB_9601 and tr_A0A0D9RV09_A0A0D9RV09_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H2PCY3_H2PCY3_PONAB_9601 and tr_A0A2K5Z2B1_A0A2K5Z2B1_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1U2Q7_G1U2Q7_RABIT_9986 and sp_P14282_CO8A1_RABIT_9986 are exactly identical! WARNING: Sequences tr_A0A2I3S1X9_A0A2I3S1X9_PANTR_9598 and sp_A6NHN0_OTOL1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I3S1X9_A0A2I3S1X9_PANTR_9598 and tr_A0A2R9AGT0_A0A2R9AGT0_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I3SKI3_A0A2I3SKI3_PANTR_9598 and tr_A0A2R8Z6A0_A0A2R8Z6A0_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2J8K450_A0A2J8K450_PANTR_9598 and tr_A0A2R9A2B8_A0A2R9A2B8_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2J8M5Y7_A0A2J8M5Y7_PANTR_9598 and tr_A0A2R9CM19_A0A2R9CM19_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QTL5_H2QTL5_PANTR_9598 and tr_A0A2R9A6P1_A0A2R9A6P1_PANPA_9597 are exactly identical! WARNING: Sequences tr_F6WEY6_F6WEY6_HORSE_9796 and tr_A0A2U4ATA9_A0A2U4ATA9_TURTR_9739 are exactly identical! WARNING: Sequences tr_F6VWB8_F6VWB8_MACMU_9544 and tr_G7P6S9_G7P6S9_MACFA_9541 are exactly identical! WARNING: Sequences tr_F6VWB8_F6VWB8_MACMU_9544 and tr_A0A096MVD2_A0A096MVD2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6VWB8_F6VWB8_MACMU_9544 and tr_A0A2K5LUF6_A0A2K5LUF6_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6VWB8_F6VWB8_MACMU_9544 and tr_A0A2K6BMA7_A0A2K6BMA7_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6VWB8_F6VWB8_MACMU_9544 and tr_A0A2K5ZRM9_A0A2K5ZRM9_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7FPW3_F7FPW3_MACMU_9544 and tr_A0A096MV21_A0A096MV21_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7FPW3_F7FPW3_MACMU_9544 and tr_A0A0D9RIU4_A0A0D9RIU4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7FPW3_F7FPW3_MACMU_9544 and tr_A0A2K5MIM6_A0A2K5MIM6_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7FPW3_F7FPW3_MACMU_9544 and tr_A0A2K5YA30_A0A2K5YA30_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7HEL0_F7HEL0_MACMU_9544 and tr_G7NVT9_G7NVT9_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7HEL0_F7HEL0_MACMU_9544 and tr_A0A2I3NGK8_A0A2I3NGK8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7HEL0_F7HEL0_MACMU_9544 and tr_A0A2K6AVT3_A0A2K6AVT3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HEL0_F7HEL0_MACMU_9544 and tr_A0A2K5XR64_A0A2K5XR64_MANLE_9568 are exactly identical! WARNING: Sequences tr_H0ZHQ9_H0ZHQ9_TAEGU_59729 and tr_A0A093QBJ6_A0A093QBJ6_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0ZHQ9_H0ZHQ9_TAEGU_59729 and tr_A0A091W0M3_A0A091W0M3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_B8XTR5_B8XTR5_PIG_9823 and tr_A0A2U4AST3_A0A2U4AST3_TURTR_9739 are exactly identical! WARNING: Sequences tr_B8XTR5_B8XTR5_PIG_9823 and tr_A0A2U4ASU4_A0A2U4ASU4_TURTR_9739 are exactly identical! WARNING: Sequences tr_G7NVU0_G7NVU0_MACFA_9541 and tr_A0A096MXN9_A0A096MXN9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7NVU0_G7NVU0_MACFA_9541 and tr_A0A0D9S8A3_A0A0D9S8A3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G7NVU0_G7NVU0_MACFA_9541 and tr_A0A2K5LZ48_A0A2K5LZ48_CERAT_9531 are exactly identical! WARNING: Sequences tr_G7NVU0_G7NVU0_MACFA_9541 and tr_A0A2K6D0R9_A0A2K6D0R9_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7NVU0_G7NVU0_MACFA_9541 and tr_A0A2K5XW31_A0A2K5XW31_MANLE_9568 are exactly identical! WARNING: Sequences tr_G7NYN2_G7NYN2_MACFA_9541 and tr_A0A2K5YSV0_A0A2K5YSV0_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A096MPN1_A0A096MPN1_PAPAN_9555 and tr_A0A2K5KRK7_A0A2K5KRK7_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096MPN1_A0A096MPN1_PAPAN_9555 and tr_A0A2K6B4J0_A0A2K6B4J0_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096MYV1_A0A096MYV1_PAPAN_9555 and tr_A0A0D9S7S9_A0A0D9S7S9_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096MYV1_A0A096MYV1_PAPAN_9555 and tr_A0A2K5LV71_A0A2K5LV71_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096MYV1_A0A096MYV1_PAPAN_9555 and tr_A0A2K6DXS5_A0A2K6DXS5_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096MYV1_A0A096MYV1_PAPAN_9555 and tr_A0A2K6AK27_A0A2K6AK27_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I3LW74_A0A2I3LW74_PAPAN_9555 and tr_A0A0D9RA24_A0A0D9RA24_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I3MS05_A0A2I3MS05_PAPAN_9555 and tr_A0A2K5KTZ0_A0A2K5KTZ0_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3N198_A0A2I3N198_PAPAN_9555 and tr_A0A0D9RZL4_A0A0D9RZL4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I3N198_A0A2I3N198_PAPAN_9555 and tr_A0A2K5M607_A0A2K5M607_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A151MD73_A0A151MD73_ALLMI_8496 and tr_A0A1U7S1E2_A0A1U7S1E2_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A2I0LW41_A0A2I0LW41_COLLI_8932 and tr_A0A1V4K457_A0A1V4K457_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A2I0MCV2_A0A2I0MCV2_COLLI_8932 and tr_A0A1V4K9I8_A0A1V4K9I8_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A226MZW5_A0A226MZW5_CALSU_9009 and tr_A0A226PCA0_A0A226PCA0_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226NDX7_A0A226NDX7_CALSU_9009 and tr_A0A226PP75_A0A226PP75_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226NFS0_A0A226NFS0_CALSU_9009 and tr_A0A226PEG9_A0A226PEG9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0S3Y3_A0A2D0S3Y3_ICTPU_7998 and tr_A0A2D0S4V2_A0A2D0S4V2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U3UZW0_A0A2U3UZW0_TURTR_9739 and tr_A0A2Y9F9U8_A0A2Y9F9U8_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U3UZW0_A0A2U3UZW0_TURTR_9739 and tr_A0A384A5E0_A0A384A5E0_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2U4ACY9_A0A2U4ACY9_TURTR_9739 and tr_A0A2Y9PBC0_A0A2Y9PBC0_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2Y9Q643_A0A2Y9Q643_DELLE_9749 and tr_A0A383Z8I6_A0A383Z8I6_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 76 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/4_raxmlng_ancestral/Q15848.raxml.reduced.phy Alignment comprises 1 partitions and 244 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 244 Gaps: 12.66 % Invariant sites: 0.41 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/4_raxmlng_ancestral/Q15848.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/3_mltree/Q15848.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 61 / 4880 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -82671.773704 [00:00:00 -82671.773704] Initial branch length optimization [00:00:00 -82127.149799] Model parameter optimization (eps = 0.100000) [00:00:35] Tree #1, final logLikelihood: -81999.530453 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.121421,0.249771) (0.224222,0.325423) (0.253404,0.752553) (0.400953,1.760819) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/4_raxmlng_ancestral/Q15848.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/4_raxmlng_ancestral/Q15848.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/4_raxmlng_ancestral/Q15848.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q15848/4_raxmlng_ancestral/Q15848.raxml.log Analysis started: 02-Jun-2021 18:29:28 / finished: 02-Jun-2021 18:30:06 Elapsed time: 38.054 seconds Consumed energy: 2.735 Wh