RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 18-Jun-2021 16:43:04 as follows: raxml-ng --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/2_msa/Q15475_trimmed_msa.fasta --data-type AA --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/3_mltree/Q15475 --seed 2 --threads 2 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (2 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/2_msa/Q15475_trimmed_msa.fasta [00:00:00] Loaded alignment with 998 taxa and 79 sites WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and sp_Q95RW8_OPTIX_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_B4J832_B4J832_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_B4HRI2_B4HRI2_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_Q290X5_Q290X5_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_B4NMK5_B4NMK5_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_B3MGD1_B3MGD1_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_B4GB30_B4GB30_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_B4LJL1_B4LJL1_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_B4KMU0_B4KMU0_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_A0A0L0CRI7_A0A0L0CRI7_LUCCU_7375 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_A0A0M4EDG8_A0A0M4EDG8_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4QF90_B4QF90_DROSI_7240 and tr_A0A1W4WA96_A0A1W4WA96_DROFC_30025 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_Q9Y1P6_Q9Y1P6_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_B4J3N0_B4J3N0_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_Q29D99_Q29D99_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_B4N4K3_B4N4K3_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_B3M9T2_B3M9T2_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_B4KYG9_B4KYG9_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_A0A0M5J448_A0A0M5J448_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4QJ70_B4QJ70_DROSI_7240 and tr_A0A1W4VBC8_A0A1W4VBC8_DROFC_30025 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and sp_P40427_EXD_DROME_7227 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_B4JX43_B4JX43_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_B4IMG8_B4IMG8_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and sp_Q29CT2_EXD_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_B4MT87_B4MT87_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_B3MPX5_B3MPX5_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_B4HCU0_B4HCU0_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_B4MA61_B4MA61_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_B4MAH8_B4MAH8_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_A0A0M4ESN1_A0A0M4ESN1_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4R5K9_B4R5K9_DROSI_7240 and tr_A0A1W4VFS7_A0A1W4VFS7_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9GWZ5_E9GWZ5_DAPPU_6669 and tr_A0A162QP78_A0A162QP78_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E9HU51_E9HU51_DAPPU_6669 and tr_A0A164TPQ4_A0A164TPQ4_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_K7ITH1_K7ITH1_NASVI_7425 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A088AE68_A0A088AE68_APIME_7460 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A158NBK1_A0A158NBK1_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_F4X8M2_F4X8M2_ACREC_103372 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A026W708_A0A026W708_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A0M8ZYZ3_A0A0M8ZYZ3_9HYME_166423 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A0L7QRN6_A0A0L7QRN6_9HYME_597456 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A151WFD1_A0A151WFD1_9HYME_64791 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A154P8H8_A0A154P8H8_9HYME_178035 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A195DRB2_A0A195DRB2_9HYME_471704 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A195B9R7_A0A195B9R7_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A195FE13_A0A195FE13_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2A1J0_E2A1J0_CAMFO_104421 and tr_A0A195C720_A0A195C720_9HYME_456900 are exactly identical! WARNING: Sequences tr_E2A405_E2A405_CAMFO_104421 and tr_A0A158NJ62_A0A158NJ62_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2A405_E2A405_CAMFO_104421 and tr_F4W758_F4W758_ACREC_103372 are exactly identical! WARNING: Sequences tr_E2A405_E2A405_CAMFO_104421 and tr_E2BK35_E2BK35_HARSA_610380 are exactly identical! WARNING: Sequences tr_E2A405_E2A405_CAMFO_104421 and tr_A0A151X130_A0A151X130_9HYME_64791 are exactly identical! WARNING: Sequences tr_E2A405_E2A405_CAMFO_104421 and tr_A0A151JRN5_A0A151JRN5_9HYME_471704 are exactly identical! WARNING: Sequences tr_E2A405_E2A405_CAMFO_104421 and tr_A0A195BKY2_A0A195BKY2_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2A405_E2A405_CAMFO_104421 and tr_A0A195EXJ0_A0A195EXJ0_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2A9D7_E2A9D7_CAMFO_104421 and tr_A0A158NDU2_A0A158NDU2_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2A9D7_E2A9D7_CAMFO_104421 and tr_F4W7Y8_F4W7Y8_ACREC_103372 are exactly identical! WARNING: Sequences tr_E2A9D7_E2A9D7_CAMFO_104421 and tr_E2BKS7_E2BKS7_HARSA_610380 are exactly identical! WARNING: Sequences tr_E2A9D7_E2A9D7_CAMFO_104421 and tr_A0A195BR54_A0A195BR54_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2A9D7_E2A9D7_CAMFO_104421 and tr_A0A195EYL4_A0A195EYL4_9HYME_34720 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_H2LV74_H2LV74_ORYLA_8090 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_A0A3B5QGS7_A0A3B5QGS7_XIPMA_8083 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_I3K5I3_I3K5I3_ORENI_8128 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_G3Q5K9_G3Q5K9_GASAC_69293 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_A0A087X6G7_A0A087X6G7_POEFO_48698 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_A0A1S3N8K5_A0A1S3N8K5_SALSA_8030 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_A0A1S3SDY7_A0A1S3SDY7_SALSA_8030 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_A0A2I4CNE0_A0A2I4CNE0_9TELE_52670 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_A0A060WXQ0_A0A060WXQ0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_O93282_O93282_DANRE_7955 and tr_A0A2U9B0W6_A0A2U9B0W6_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q5TYZ2_Q5TYZ2_DANRE_7955 and tr_A0A3B1INR8_A0A3B1INR8_ASTMX_7994 are exactly identical! WARNING: Sequences sp_Q6NZ04_SIX1B_DANRE_7955 and tr_W5LJB6_W5LJB6_ASTMX_7994 are exactly identical! WARNING: Sequences sp_Q6NZ04_SIX1B_DANRE_7955 and tr_W5U7J8_W5U7J8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_A0A3B3IIV2_A0A3B3IIV2_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_M4AYU4_M4AYU4_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_I3IX46_I3IX46_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_H3B598_H3B598_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_W5K9W8_W5K9W8_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_W5NHV5_W5NHV5_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_A0A087XYP1_A0A087XYP1_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_A0A0P7X0C2_A0A0P7X0C2_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_A0A1L8G1B0_A0A1L8G1B0_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_A0A2I4CZC7_A0A2I4CZC7_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_A0A2D0QLT8_A0A2D0QLT8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6PCA5_Q6PCA5_DANRE_7955 and tr_A0A2U9CFY3_A0A2U9CFY3_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q7T3G8_Q7T3G8_DANRE_7955 and tr_K7G822_K7G822_PELSI_13735 are exactly identical! WARNING: Sequences tr_Q7T3G8_Q7T3G8_DANRE_7955 and tr_F6Y0D4_F6Y0D4_XENTR_8364 are exactly identical! WARNING: Sequences tr_Q7T3G8_Q7T3G8_DANRE_7955 and tr_Q9PWD9_Q9PWD9_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q7T3G8_Q7T3G8_DANRE_7955 and tr_A0A2Y9DAH5_A0A2Y9DAH5_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and sp_Q62232_SIX2_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_M3YKQ6_M3YKQ6_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H2LHU6_H2LHU6_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_G1S4P9_G1S4P9_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_G3GV57_G3GV57_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_G3QZU3_G3QZU3_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H2P6C6_H2P6C6_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_G1TWB1_G1TWB1_RABIT_9986 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_E2R181_E2R181_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H2QHU8_H2QHU8_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_F6ST81_F6ST81_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_F6SPS0_F6SPS0_HORSE_9796 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_W5P7Q5_W5P7Q5_SHEEP_9940 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A0G2JVB1_A0A0G2JVB1_RAT_10116 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A3B5Q8N9_A0A3B5Q8N9_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_I3IX50_I3IX50_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_I3N8E1_I3N8E1_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H0Y1T2_H0Y1T2_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H2RYD1_H2RYD1_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H2SZU2_H2SZU2_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H0VTL6_H0VTL6_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and sp_Q9NPC8_SIX2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_F7HAN3_F7HAN3_MACMU_9544 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_G5C9U0_G5C9U0_HETGA_10181 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_H3CPU0_H3CPU0_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_G3P9K7_G3P9K7_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_G3WYW6_G3WYW6_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_F6Z031_F6Z031_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_F1S5K5_F1S5K5_PIG_9823 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_D2GUA0_D2GUA0_AILME_9646 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_E1BJ27_E1BJ27_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_L5KTI8_L5KTI8_PTEAL_9402 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2I2U1U5_A0A2I2U1U5_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A3B1JGZ8_A0A3B1JGZ8_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_W5NHV4_W5NHV4_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A087XYM7_A0A087XYM7_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A096NWW4_A0A096NWW4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A091CL14_A0A091CL14_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A0D9RLL8_A0A0D9RLL8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A0P7UJ50_A0A0P7UJ50_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A1S2ZRF9_A0A1S2ZRF9_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A1S3F9Q3_A0A1S3F9Q3_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A3Q0E030_A0A3Q0E030_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A1U7QQW0_A0A1U7QQW0_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2I4CYZ5_A0A2I4CYZ5_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2D0QK21_A0A2D0QK21_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2K5KNN8_A0A2K5KNN8_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2K6B329_A0A2K6B329_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2K6AKG2_A0A2K6AKG2_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2R9BZP5_A0A2R9BZP5_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2U4BXT7_A0A2U4BXT7_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2U3W5J3_A0A2U3W5J3_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2U3XZ28_A0A2U3XZ28_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2U9CC63_A0A2U9CC63_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2Y9D7X8_A0A2Y9D7X8_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2Y9KSF8_A0A2Y9KSF8_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2Y9N9E2_A0A2Y9N9E2_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A2Y9SFT3_A0A2Y9SFT3_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A384CV58_A0A384CV58_URSMA_29073 are exactly identical! WARNING: Sequences tr_Q98TH1_Q98TH1_DANRE_7955 and tr_A0A384ASN5_A0A384ASN5_BALAS_310752 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_G1NLF1_G1NLF1_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_U3JLD3_U3JLD3_FICAL_59894 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_U3IKH2_U3IKH2_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A0Q3MHT4_A0A0Q3MHT4_AMAAE_12930 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A091JJI0_A0A091JJI0_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A091UWP1_A0A091UWP1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A087QGS1_A0A087QGS1_APTFO_9233 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A091WCG1_A0A091WCG1_OPIHO_30419 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A091GBQ0_A0A091GBQ0_9AVES_55661 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A218UZG3_A0A218UZG3_9PASE_299123 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A226MIS7_A0A226MIS7_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1NHV5_F1NHV5_CHICK_9031 and tr_A0A226NYL3_A0A226NYL3_COLVI_9014 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and sp_Q62233_SIX3_MOUSE_10090 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_M3YKP5_M3YKP5_MUSPF_9669 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H2P6C7_H2P6C7_PONAB_9601 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H9G823_H9G823_ANOCA_28377 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_E2R195_E2R195_CANLF_9615 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H2QHU7_H2QHU7_PANTR_9598 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_F6T8J6_F6T8J6_MONDO_13616 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A0G2K2C0_A0A0G2K2C0_RAT_10116 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_I3N7F8_I3N7F8_ICTTR_43179 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H0XUM1_H0XUM1_OTOGA_30611 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H2T103_H2T103_TAKRU_31033 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H0W0A6_H0W0A6_CAVPO_10141 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and sp_O95343_SIX3_HUMAN_9606 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_F6VQQ1_F6VQQ1_MACMU_9544 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_G5C9U1_G5C9U1_HETGA_10181 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_K7FLU8_K7FLU8_PELSI_13735 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H3CPU1_H3CPU1_TETNG_99883 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_H0Z084_H0Z084_TAEGU_59729 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_F7D0D8_F7D0D8_XENTR_8364 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_F6YI63_F6YI63_CALJA_9483 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A286ZW96_A0A286ZW96_PIG_9823 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_G1LHA4_G1LHA4_AILME_9646 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_E1BMT1_E1BMT1_BOVIN_9913 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_L5KTE3_L5KTE3_PTEAL_9402 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2I2U101_A0A2I2U101_FELCA_9685 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_U3KEU7_U3KEU7_FICAL_59894 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2I3LMC5_A0A2I3LMC5_PAPAN_9555 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A0D9RLK6_A0A0D9RLK6_CHLSB_60711 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A151NXT6_A0A151NXT6_ALLMI_8496 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A0Q3PGF8_A0A0Q3PGF8_AMAAE_12930 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A091F8P7_A0A091F8P7_CORBR_85066 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A093HJU3_A0A093HJU3_STRCA_441894 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A099ZM04_A0A099ZM04_TINGU_94827 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A0A0A6J6_A0A0A0A6J6_CHAVO_50402 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A1S3WK63_A0A1S3WK63_ERIEU_9365 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A1S3FA15_A0A1S3FA15_DIPOR_10020 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_Q9IAK3_Q9IAK3_XENLA_8355 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A1U7RB36_A0A1U7RB36_ALLSI_38654 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A1U7R137_A0A1U7R137_MESAU_10036 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A1V4JJK3_A0A1V4JJK3_PATFA_372326 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A218UTF1_A0A218UTF1_9PASE_299123 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A226ND17_A0A226ND17_CALSU_9009 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A226PD20_A0A226PD20_COLVI_9014 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2K5M5S4_A0A2K5M5S4_CERAT_9531 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2K6E1A0_A0A2K6E1A0_MACNE_9545 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2K5ZD96_A0A2K5ZD96_MANLE_9568 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2R9A339_A0A2R9A339_PANPA_9597 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2U3W5M8_A0A2U3W5M8_ODORO_9708 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2U3YCA6_A0A2U3YCA6_LEPWE_9713 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2Y9KL34_A0A2Y9KL34_ENHLU_391180 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2Y9NDM0_A0A2Y9NDM0_DELLE_9749 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A2Y9FL85_A0A2Y9FL85_PHYCD_9755 are exactly identical! WARNING: Sequences sp_O42406_SIX3_CHICK_9031 and tr_A0A384ARX8_A0A384ARX8_BALAS_310752 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and sp_Q9QZ28_SIX6_MOUSE_10090 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_M3Y4U9_M3Y4U9_MUSPF_9669 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_H2MM07_H2MM07_ORYLA_8090 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G1RTW5_G1RTW5_NOMLE_61853 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G1PMB8_G1PMB8_MYOLU_59463 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G3IBN3_G3IBN3_CRIGR_10029 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G3RXM7_G3RXM7_GORGO_9595 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G1NLF3_G1NLF3_MELGA_9103 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G1SMF9_G1SMF9_RABIT_9986 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_F1PN35_F1PN35_CANLF_9615 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_H2Q8E7_H2Q8E7_PANTR_9598 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_F6PGM1_F6PGM1_MONDO_13616 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_F6UQT2_F6UQT2_HORSE_9796 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_W5QJ06_W5QJ06_SHEEP_9940 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_D3ZCC7_D3ZCC7_RAT_10116 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A3B5QLM1_A0A3B5QLM1_XIPMA_8083 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_I3KW48_I3KW48_ORENI_8128 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_I3N9B8_I3N9B8_ICTTR_43179 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_H0Y0M8_H0Y0M8_OTOGA_30611 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_H2TPS1_H2TPS1_TAKRU_31033 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and sp_O95475_SIX6_HUMAN_9606 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G5C5H7_G5C5H7_HETGA_10181 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_H3DIZ1_H3DIZ1_TETNG_99883 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G3P0L5_G3P0L5_GASAC_69293 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G3SRP8_G3SRP8_LOXAF_9785 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G3WRH9_G3WRH9_SARHA_9305 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_H0ZRY7_H0ZRY7_TAEGU_59729 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_F7IFQ4_F7IFQ4_CALJA_9483 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_F1SSH9_F1SSH9_PIG_9823 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_H3BGX2_H3BGX2_LATCH_7897 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G1L892_G1L892_AILME_9646 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_G7PAF4_G7PAF4_MACFA_9541 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_L5KES7_L5KES7_PTEAL_9402 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A337SGY4_A0A337SGY4_FELCA_9685 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_U3JLE1_U3JLE1_FICAL_59894 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_U3IAM2_U3IAM2_ANAPL_8839 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_W5MVB7_W5MVB7_LEPOC_7918 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A087XDK6_A0A087XDK6_POEFO_48698 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2I3NCR1_A0A2I3NCR1_PAPAN_9555 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A091DJH6_A0A091DJH6_FUKDA_885580 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A0D9RNX9_A0A0D9RNX9_CHLSB_60711 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A091IR80_A0A091IR80_EGRGA_188379 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A099ZAM9_A0A099ZAM9_TINGU_94827 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A0A0AWE1_A0A0A0AWE1_CHAVO_50402 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2I0MNN7_A0A2I0MNN7_COLLI_8932 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A1S2ZH54_A0A1S2ZH54_ERIEU_9365 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A1S3F280_A0A1S3F280_DIPOR_10020 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A1S3R083_A0A1S3R083_SALSA_8030 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A1S3SPD4_A0A1S3SPD4_SALSA_8030 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A1U7UH43_A0A1U7UH43_TARSY_1868482 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A1U7QFI1_A0A1U7QFI1_MESAU_10036 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A1V4KA27_A0A1V4KA27_PATFA_372326 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2I4BNM3_A0A2I4BNM3_9TELE_52670 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A060VUY4_A0A060VUY4_ONCMY_8022 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A060WPX9_A0A060WPX9_ONCMY_8022 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A218UYD0_A0A218UYD0_9PASE_299123 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A226M622_A0A226M622_CALSU_9009 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A226MJ54_A0A226MJ54_CALSU_9009 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A226NXE9_A0A226NXE9_COLVI_9014 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2K5MTE1_A0A2K5MTE1_CERAT_9531 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2K6CPY7_A0A2K6CPY7_MACNE_9545 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2K5YDH8_A0A2K5YDH8_MANLE_9568 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2R9CLP7_A0A2R9CLP7_PANPA_9597 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2U3V6D8_A0A2U3V6D8_TURTR_9739 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2U3X147_A0A2U3X147_ODORO_9708 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2U3XF82_A0A2U3XF82_LEPWE_9713 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2U9CL27_A0A2U9CL27_SCOMX_52904 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2Y9IIV5_A0A2Y9IIV5_ENHLU_391180 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2Y9N4X9_A0A2Y9N4X9_DELLE_9749 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A2Y9FGA5_A0A2Y9FGA5_PHYCD_9755 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A384CYH4_A0A384CYH4_URSMA_29073 are exactly identical! WARNING: Sequences sp_O93307_SIX6_CHICK_9031 and tr_A0A384B0C2_A0A384B0C2_BALAS_310752 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and sp_Q62231_SIX1_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_M3Y4V5_M3Y4V5_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_H2MM02_H2MM02_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G1RTX3_G1RTX3_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G1NXL5_G1NXL5_MYOLU_59463 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G3IE65_G3IE65_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2I2ZDT5_A0A2I2ZDT5_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and sp_A1YER0_SIX1_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_H2NLF2_H2NLF2_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G1T717_G1T717_RABIT_9986 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_J9P3S7_J9P3S7_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_H2Q8E8_H2Q8E8_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_F6PGL1_F6PGL1_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_F6W7Q8_F6W7Q8_HORSE_9796 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_W5QJ07_W5QJ07_SHEEP_9940 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G3V970_G3V970_RAT_10116 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A3B5QH22_A0A3B5QH22_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_I3KW47_I3KW47_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_I3N0V4_I3N0V4_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_H0X817_H0X817_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_H2TQH5_H2TQH5_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A286XP18_A0A286XP18_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and sp_Q15475_SIX1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G5C5H8_G5C5H8_HETGA_10181 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_Q4RM36_Q4RM36_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G3P0M4_G3P0M4_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G3TCC7_G3TCC7_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_G3WSV0_G3WSV0_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_F6Y0S9_F6Y0S9_XENTR_8364 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_F7I8P1_F7I8P1_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_E5DCJ4_E5DCJ4_PIG_9823 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_H3BGT3_H3BGT3_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_D2GVS4_D2GVS4_AILME_9646 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_Q08DI4_Q08DI4_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_L5KH47_L5KH47_PTEAL_9402 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_M3XF50_M3XF50_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_W5MVC7_W5MVC7_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A087XDP3_A0A087XDP3_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2I3MLG5_A0A2I3MLG5_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A091CTZ9_A0A091CTZ9_FUKDA_885580 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A0D9RNX4_A0A0D9RNX4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A0P7TKC3_A0A0P7TKC3_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A091G8Q9_A0A091G8Q9_9AVES_55661 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A0A0AW81_A0A0A0AW81_CHAVO_50402 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A093G527_A0A093G527_DRYPU_118200 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A091IDY6_A0A091IDY6_CALAN_9244 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1S2ZH65_A0A1S2ZH65_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1S3F1X7_A0A1S3F1X7_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1S3R0G7_A0A1S3R0G7_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_B5DG16_B5DG16_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1L8EZU7_A0A1L8EZU7_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1L8FA73_A0A1L8FA73_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1U7TPY5_A0A1U7TPY5_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1U7Q8H1_A0A1U7Q8H1_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A1V4KAF9_A0A1V4KAF9_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2I4D9S0_A0A2I4D9S0_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A060VT83_A0A060VT83_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A060WWJ5_A0A060WWJ5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A218UYL3_A0A218UYL3_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A226MIE1_A0A226MIE1_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A226NXY9_A0A226NXY9_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2K5NJ34_A0A2K5NJ34_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2K6D3Z2_A0A2K6D3Z2_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2K5ZMB9_A0A2K5ZMB9_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2R9C4R6_A0A2R9C4R6_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2U3V4B6_A0A2U3V4B6_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2U3WRL1_A0A2U3WRL1_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2U3XF53_A0A2U3XF53_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2U9CP71_A0A2U9CP71_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2Y9DAX2_A0A2Y9DAX2_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2Y9LAD3_A0A2Y9LAD3_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2Y9MZZ4_A0A2Y9MZZ4_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A2Y9F9G2_A0A2Y9F9G2_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A384CXM1_A0A384CXM1_URSMA_29073 are exactly identical! WARNING: Sequences tr_Q3C2H5_Q3C2H5_CHICK_9031 and tr_A0A384B157_A0A384B157_BALAS_310752 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_M3Y2W7_M3Y2W7_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_G1NVB8_G1NVB8_MYOLU_59463 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_H2NZ95_H2NZ95_PONAB_9601 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_F1PSK1_F1PSK1_CANLF_9615 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_H2R5Z8_H2R5Z8_PANTR_9598 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_F6VMC5_F6VMC5_HORSE_9796 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A0G2K7K3_A0A0G2K7K3_RAT_10116 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_H0VQN9_H0VQN9_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and sp_Q8N196_SIX5_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_G5AUX8_G5AUX8_HETGA_10181 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_G3U0B0_G3U0B0_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2R8MCB6_A0A2R8MCB6_CALJA_9483 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A287ANB9_A0A287ANB9_PIG_9823 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_E1BAD7_E1BAD7_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_M3X906_M3X906_FELCA_9685 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A0A0MXG2_A0A0A0MXG2_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A0D9S202_A0A0D9S202_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A1U7R2V9_A0A1U7R2V9_MESAU_10036 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2K5M9C0_A0A2K5M9C0_CERAT_9531 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2K6BYS5_A0A2K6BYS5_MACNE_9545 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2U3VZJ5_A0A2U3VZJ5_ODORO_9708 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2U3Y4M9_A0A2U3Y4M9_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2Y9DV70_A0A2Y9DV70_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2Y9L8F1_A0A2Y9L8F1_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2Y9P4H5_A0A2Y9P4H5_DELLE_9749 are exactly identical! WARNING: Sequences sp_P70178_SIX5_MOUSE_10090 and tr_A0A2Y9EIR6_A0A2Y9EIR6_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_H2NLF4_H2NLF4_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_F6XRS2_F6XRS2_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_K7A7J5_K7A7J5_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_F6UJE4_F6UJE4_HORSE_9796 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_D3ZAJ7_D3ZAJ7_RAT_10116 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_I3N3Q8_I3N3Q8_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_H0XEL6_H0XEL6_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A286XAC1_A0A286XAC1_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and sp_Q9UIU6_SIX4_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_G3TMW0_G3TMW0_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_F7I6A7_F7I6A7_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A286ZV22_A0A286ZV22_PIG_9823 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_G1L899_G1L899_AILME_9646 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_M3WSX2_M3WSX2_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2I3MIH4_A0A2I3MIH4_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A0D9RNW7_A0A0D9RNW7_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A1S2ZH59_A0A1S2ZH59_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A1S3F399_A0A1S3F399_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A1U7TW27_A0A1U7TW27_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A1U7QIA3_A0A1U7QIA3_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2K5NCV1_A0A2K5NCV1_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2K6AN64_A0A2K6AN64_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2K5Y037_A0A2K5Y037_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2R9AGF8_A0A2R9AGF8_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2U3WRK7_A0A2U3WRK7_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2U3XFK2_A0A2U3XFK2_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2Y9DBI0_A0A2Y9DBI0_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2Y9IRA1_A0A2Y9IRA1_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2Y9MVP0_A0A2Y9MVP0_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A2Y9S5Y3_A0A2Y9S5Y3_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A384D455_A0A384D455_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q61321_SIX4_MOUSE_10090 and tr_A0A384B0H5_A0A384B0H5_BALAS_310752 are exactly identical! WARNING: Sequences tr_W5JRT7_W5JRT7_ANODA_43151 and tr_B0WN28_B0WN28_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JRT7_W5JRT7_ANODA_43151 and sp_Q7PMT1_EXD_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JRT7_W5JRT7_ANODA_43151 and tr_A0A084W198_A0A084W198_ANOSI_74873 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_B4J6N7_B4J6N7_DROGR_7222 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_B4HQU1_B4HQU1_DROSE_7238 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_B4MR72_B4MR72_DROWI_7260 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_B3MDP8_B3MDP8_DROAN_7217 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_B4GCP8_B4GCP8_DROPE_7234 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_B4LMA3_B4LMA3_DROVI_7244 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_B4KND7_B4KND7_DROMO_7230 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_A0A0M4E858_A0A0M4E858_DROBS_30019 are exactly identical! WARNING: Sequences sp_Q27350_SO_DROME_7227 and tr_A0A1W4VDH2_A0A1W4VDH2_DROFC_30025 are exactly identical! WARNING: Sequences tr_H2LQZ2_H2LQZ2_ORYLA_8090 and tr_A0A2I4CE86_A0A2I4CE86_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2LQZ2_H2LQZ2_ORYLA_8090 and tr_A0A2U9B5B5_A0A2U9B5B5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2M3C2_H2M3C2_ORYLA_8090 and sp_O73916_SIX3_ORYLA_8090 are exactly identical! WARNING: Sequences tr_H2M3C2_H2M3C2_ORYLA_8090 and tr_I3KFW8_I3KFW8_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2M3C2_H2M3C2_ORYLA_8090 and tr_A0A2I4B460_A0A2I4B460_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2M3C2_H2M3C2_ORYLA_8090 and tr_A0A2U9CMY9_A0A2U9CMY9_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2MLZ5_H2MLZ5_ORYLA_8090 and tr_I3KW46_I3KW46_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2MLZ5_H2MLZ5_ORYLA_8090 and tr_H2TQP6_H2TQP6_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2MLZ5_H2MLZ5_ORYLA_8090 and tr_H3C1I8_H3C1I8_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2MLZ5_H2MLZ5_ORYLA_8090 and tr_G3P0M9_G3P0M9_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2MLZ5_H2MLZ5_ORYLA_8090 and tr_A0A2U9CIT3_A0A2U9CIT3_SCOMX_52904 are exactly identical! WARNING: Sequences tr_G3SHG8_G3SHG8_GORGO_9595 and tr_A0A2J8IMI8_A0A2J8IMI8_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3SHG8_G3SHG8_GORGO_9595 and sp_E9PGG2_ANHX_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3SHG8_G3SHG8_GORGO_9595 and tr_A0A2R8ZT65_A0A2R8ZT65_PANPA_9597 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_K7FN86_K7FN86_PELSI_13735 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_H0Z093_H0Z093_TAEGU_59729 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_U3KET7_U3KET7_FICAL_59894 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A151NWG0_A0A151NWG0_ALLMI_8496 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A0Q3TP67_A0A0Q3TP67_AMAAE_12930 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A091I431_A0A091I431_CALAN_9244 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A1U7QZP6_A0A1U7QZP6_ALLSI_38654 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A218UT68_A0A218UT68_9PASE_299123 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A226ND16_A0A226ND16_CALSU_9009 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A226M7I2_A0A226M7I2_COLVI_9014 are exactly identical! WARNING: Sequences tr_H9G831_H9G831_ANOCA_28377 and tr_A0A226PDZ7_A0A226PDZ7_COLVI_9014 are exactly identical! WARNING: Sequences tr_H9GNL3_H9GNL3_ANOCA_28377 and tr_H3AXH0_H3AXH0_LATCH_7897 are exactly identical! WARNING: Sequences tr_F6PGG3_F6PGG3_MONDO_13616 and tr_G3WTY1_G3WTY1_SARHA_9305 are exactly identical! WARNING: Sequences tr_B0WMH7_B0WMH7_CULQU_7176 and tr_Q0IEI2_Q0IEI2_AEDAE_7159 are exactly identical! WARNING: Sequences tr_B0XGC9_B0XGC9_CULQU_7176 and tr_Q17PA2_Q17PA2_AEDAE_7159 are exactly identical! WARNING: Sequences tr_A0A3B5Q517_A0A3B5Q517_XIPMA_8083 and tr_A0A087XVG1_A0A087XVG1_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AGB4_M4AGB4_XIPMA_8083 and tr_A0A096LSL7_A0A096LSL7_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4B0X7_M4B0X7_XIPMA_8083 and tr_G3NEB2_G3NEB2_GASAC_69293 are exactly identical! WARNING: Sequences tr_M4B0X7_M4B0X7_XIPMA_8083 and tr_A0A087XWV5_A0A087XWV5_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A087ZT82_A0A087ZT82_APIME_7460 and tr_A0A0N0U6H7_A0A0N0U6H7_9HYME_166423 are exactly identical! WARNING: Sequences tr_A0A087ZT82_A0A087ZT82_APIME_7460 and tr_A0A2A3ECA6_A0A2A3ECA6_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A088AU94_A0A088AU94_APIME_7460 and tr_A0A2A3ENV5_A0A2A3ENV5_APICC_94128 are exactly identical! WARNING: Sequences tr_H9JP31_H9JP31_BOMMO_7091 and tr_A0A212FD33_A0A212FD33_DANPL_278856 are exactly identical! WARNING: Sequences tr_H9JP31_H9JP31_BOMMO_7091 and tr_A0A0L7KZJ0_A0A0L7KZJ0_9NEOP_104452 are exactly identical! WARNING: Sequences tr_H9JP31_H9JP31_BOMMO_7091 and tr_A0A194RF32_A0A194RF32_PAPMA_76193 are exactly identical! WARNING: Sequences tr_H9JP31_H9JP31_BOMMO_7091 and tr_A0A194QHW1_A0A194QHW1_PAPXU_66420 are exactly identical! WARNING: Sequences tr_H9JP31_H9JP31_BOMMO_7091 and tr_A0A2A4K3V4_A0A2A4K3V4_HELVI_7102 are exactly identical! WARNING: Sequences tr_A0A0H5S8F3_A0A0H5S8F3_BRUMA_6279 and tr_A0A044TYQ1_A0A044TYQ1_ONCVO_6282 are exactly identical! WARNING: Sequences tr_A0A158PU62_A0A158PU62_BRUMA_6279 and tr_A0A0N4TSW4_A0A0N4TSW4_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A1P6C825_A0A1P6C825_BRUMA_6279 and tr_A0A044RK73_A0A044RK73_ONCVO_6282 are exactly identical! WARNING: Sequences tr_A0A1P6C825_A0A1P6C825_BRUMA_6279 and tr_A0A0N4TKJ2_A0A0N4TKJ2_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A1P6C825_A0A1P6C825_BRUMA_6279 and tr_A0A0R3RHG2_A0A0R3RHG2_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A1P6C825_A0A1P6C825_BRUMA_6279 and tr_A0A183H6U2_A0A183H6U2_9BILA_387005 are exactly identical! WARNING: Sequences tr_A0A1P6C825_A0A1P6C825_BRUMA_6279 and tr_A0A182E4X4_A0A182E4X4_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A1P6C825_A0A1P6C825_BRUMA_6279 and tr_A0A1I7VAI9_A0A1I7VAI9_LOALO_7209 are exactly identical! WARNING: Sequences tr_F7D2Q7_F7D2Q7_MACMU_9544 and tr_G7PJJ0_G7PJJ0_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7D2Q7_F7D2Q7_MACMU_9544 and tr_A0A096MM68_A0A096MM68_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7D2Q7_F7D2Q7_MACMU_9544 and tr_A0A0D9S5T4_A0A0D9S5T4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7D2Q7_F7D2Q7_MACMU_9544 and tr_A0A2K5NQU8_A0A2K5NQU8_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7D2Q7_F7D2Q7_MACMU_9544 and tr_A0A2K6BS97_A0A2K6BS97_MACNE_9545 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V0RWZ8_A0A0V0RWZ8_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V1CY51_A0A0V1CY51_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V0V934_A0A0V0V934_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V1KXZ7_A0A0V1KXZ7_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V0ZVF6_A0A0V0ZVF6_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V0YI03_A0A0V0YI03_TRIPS_6337 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V1MRZ3_A0A0V1MRZ3_9BILA_268474 are exactly identical! WARNING: Sequences tr_E5S7I0_E5S7I0_TRISP_6334 and tr_A0A0V1H2C8_A0A0V1H2C8_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0NBT5_A0NBT5_ANOGA_7165 and tr_Q7QH81_Q7QH81_ANOGA_7165 are exactly identical! WARNING: Sequences tr_A0NBT5_A0NBT5_ANOGA_7165 and tr_A0A084WLW1_A0A084WLW1_ANOSI_74873 are exactly identical! WARNING: Sequences tr_Q7PZ30_Q7PZ30_ANOGA_7165 and tr_Q16WN4_Q16WN4_AEDAE_7159 are exactly identical! WARNING: Sequences tr_Q7PZ30_Q7PZ30_ANOGA_7165 and tr_A0A084WBG8_A0A084WBG8_ANOSI_74873 are exactly identical! WARNING: Sequences tr_Q7PZ30_Q7PZ30_ANOGA_7165 and tr_A0A0L0BVY0_A0A0L0BVY0_LUCCU_7375 are exactly identical! WARNING: Sequences tr_D6X3W6_D6X3W6_TRICA_7070 and tr_N6TV45_N6TV45_DENPD_77166 are exactly identical! WARNING: Sequences tr_H2YGF9_H2YGF9_CIOSA_51511 and tr_H2XLH4_H2XLH4_CIOIN_7719 are exactly identical! WARNING: Sequences tr_G0MSB1_G0MSB1_CAEBE_135651 and tr_G0MSB4_G0MSB4_CAEBE_135651 are exactly identical! WARNING: Sequences tr_G0NH25_G0NH25_CAEBE_135651 and tr_G0NH27_G0NH27_CAEBE_135651 are exactly identical! WARNING: Sequences tr_F6Y0Z9_F6Y0Z9_XENTR_8364 and tr_A0A1L8FAD4_A0A1L8FAD4_XENLA_8355 are exactly identical! WARNING: Sequences tr_E3LP57_E3LP57_CAERE_31234 and tr_A0A261CII1_A0A261CII1_9PELO_1503980 are exactly identical! WARNING: Sequences tr_A8WY36_A8WY36_CAEBR_6238 and tr_A0A2G5TN77_A0A2G5TN77_9PELO_1611254 are exactly identical! WARNING: Sequences tr_A8X311_A8X311_CAEBR_6238 and tr_A0A2G5TF51_A0A2G5TF51_9PELO_1611254 are exactly identical! WARNING: Sequences tr_A8X312_A8X312_CAEBR_6238 and tr_A0A2G5TEQ6_A0A2G5TEQ6_9PELO_1611254 are exactly identical! WARNING: Sequences tr_B3SAU7_B3SAU7_TRIAD_10228 and tr_A0A369S9E1_A0A369S9E1_9METZ_287889 are exactly identical! WARNING: Sequences tr_B3SAU8_B3SAU8_TRIAD_10228 and tr_A0A369SAT1_A0A369SAT1_9METZ_287889 are exactly identical! WARNING: Sequences tr_E0VNN9_E0VNN9_PEDHC_121224 and tr_T1H925_T1H925_RHOPR_13249 are exactly identical! WARNING: Sequences tr_E0VYJ9_E0VYJ9_PEDHC_121224 and tr_T1HAS1_T1HAS1_RHOPR_13249 are exactly identical! WARNING: Sequences tr_E0VYJ9_E0VYJ9_PEDHC_121224 and tr_A0A3Q0J4S2_A0A3Q0J4S2_DIACI_121845 are exactly identical! WARNING: Sequences tr_A0A044UL77_A0A044UL77_ONCVO_6282 and tr_A0A182ECQ5_A0A182ECQ5_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A016UBX8_A0A016UBX8_9BILA_53326 and tr_A0A0K0CU74_A0A0K0CU74_ANGCA_6313 are exactly identical! WARNING: Sequences tr_A0A016VW18_A0A016VW18_9BILA_53326 and tr_A0A0K0DDZ4_A0A0K0DDZ4_ANGCA_6313 are exactly identical! WARNING: Sequences tr_A0A067R1Q9_A0A067R1Q9_ZOONE_136037 and tr_A0A2P8XVC4_A0A2P8XVC4_BLAGE_6973 are exactly identical! WARNING: Sequences tr_V3Z5W5_V3Z5W5_LOTGI_225164 and tr_A0A210Q479_A0A210Q479_MIZYE_6573 are exactly identical! WARNING: Sequences tr_A0A0K0FJY8_A0A0K0FJY8_STRVS_75913 and tr_A0A0K0E8E6_A0A0K0E8E6_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0FJY8_A0A0K0FJY8_STRVS_75913 and tr_A0A090L2E8_A0A090L2E8_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0K0FJY8_A0A0K0FJY8_STRVS_75913 and tr_A0A0N5BL33_A0A0N5BL33_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0FU19_A0A0K0FU19_STRVS_75913 and tr_A0A0K0DU57_A0A0K0DU57_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0FU19_A0A0K0FU19_STRVS_75913 and tr_A0A090LQF9_A0A090LQF9_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0K0FU19_A0A0K0FU19_STRVS_75913 and tr_A0A0N5BAV6_A0A0N5BAV6_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0FVR0_A0A0K0FVR0_STRVS_75913 and tr_A0A0N5BE00_A0A0N5BE00_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0ED66_A0A0K0ED66_STRER_6248 and tr_A0A090LHL3_A0A090LHL3_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0N4TUR0_A0A0N4TUR0_BRUPA_6280 and tr_A0A0R3S514_A0A0R3S514_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A0R3WIL8_A0A0R3WIL8_HYDTA_6205 and tr_A0A0R3W8E2_A0A0R3W8E2_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A0R3WQT7_A0A0R3WQT7_HYDTA_6205 and tr_A0A0R3W1K0_A0A0R3W1K0_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A158REZ5_A0A158REZ5_HYDTA_6205 and tr_A0A0R3W9A4_A0A0R3W9A4_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A151N3L0_A0A151N3L0_ALLMI_8496 and tr_A0A1U7SVW6_A0A1U7SVW6_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0R3RPK1_A0A0R3RPK1_9BILA_1147741 and tr_A0A1I7W4J1_A0A1I7W4J1_LOALO_7209 are exactly identical! WARNING: Sequences tr_A0A091EZY3_A0A091EZY3_CORBR_85066 and tr_A0A091UTS8_A0A091UTS8_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091EZY3_A0A091EZY3_CORBR_85066 and tr_A0A087QGS2_A0A087QGS2_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091EZY3_A0A091EZY3_CORBR_85066 and tr_A0A091WAF5_A0A091WAF5_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091EZY3_A0A091EZY3_CORBR_85066 and tr_A0A091J3U6_A0A091J3U6_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A0N0PDI6_A0A0N0PDI6_PAPMA_76193 and tr_A0A0N1IN86_A0A0N1IN86_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V1CZB9_A0A0V1CZB9_TRIBR_45882 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V0WF88_A0A0V0WF88_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V0UZ88_A0A0V0UZ88_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V1KX02_A0A0V1KX02_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V0ZJ03_A0A0V0ZJ03_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V0YEX1_A0A0V0YEX1_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V1MG11_A0A0V1MG11_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V1NK04_A0A0V1NK04_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V1HK95_A0A0V1HK95_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0RTL1_A0A0V0RTL1_9BILA_6336 and tr_A0A0V0TJS1_A0A0V0TJS1_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V1CUN5_A0A0V1CUN5_TRIBR_45882 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V0WZ72_A0A0V0WZ72_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V0V254_A0A0V0V254_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V1L9P7_A0A0V1L9P7_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V1A4X6_A0A0V1A4X6_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V0YH62_A0A0V0YH62_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V1MV78_A0A0V1MV78_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V1PAE3_A0A0V1PAE3_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V1I4G1_A0A0V1I4G1_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0RUE3_A0A0V0RUE3_9BILA_6336 and tr_A0A0V0U6G6_A0A0V0U6G6_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0WPH4_A0A0V0WPH4_9BILA_92179 and tr_A0A0V1PAL9_A0A0V1PAL9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0WPH4_A0A0V0WPH4_9BILA_92179 and tr_A0A0V0TM46_A0A0V0TM46_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3AB67_A0A1S3AB67_ERIEU_9365 and tr_A0A1S3GJN6_A0A1S3GJN6_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A0A1S3NDY9_A0A1S3NDY9_SALSA_8030 and tr_A0A060XWT8_A0A060XWT8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3Q650_A0A1S3Q650_SALSA_8030 and tr_A0A1S3SPD9_A0A1S3SPD9_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3Q650_A0A1S3Q650_SALSA_8030 and tr_A0A060VX27_A0A060VX27_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3Q650_A0A1S3Q650_SALSA_8030 and tr_A0A060XLZ0_A0A060XLZ0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3Q7T6_A0A1S3Q7T6_SALSA_8030 and tr_A0A060VX95_A0A060VX95_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3QYW5_A0A1S3QYW5_SALSA_8030 and tr_A0A060VMN3_A0A060VMN3_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3SP95_A0A1S3SP95_SALSA_8030 and tr_A0A060XFD2_A0A060XFD2_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3SXU6_A0A1S3SXU6_SALSA_8030 and tr_A0A060XUW6_A0A060XUW6_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1I7UVY8_A0A1I7UVY8_9PELO_1561998 and tr_A0A1I7UVY9_A0A1I7UVY9_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A0A2D0Q063_A0A2D0Q063_ICTPU_7998 and tr_A0A2D0Q1H0_A0A2D0Q1H0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2J7Q4B4_A0A2J7Q4B4_9NEOP_105785 and tr_A0A2P8YNY1_A0A2P8YNY1_BLAGE_6973 are exactly identical! WARNING: Sequences tr_A0A2G4T7J8_A0A2G4T7J8_9FUNG_1340429 and tr_A0A367JEA2_A0A367JEA2_9FUNG_86630 are exactly identical! WARNING: Duplicate sequences found: 569 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/3_mltree/Q15475.raxml.reduced.phy Alignment comprises 1 partitions and 79 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 79 / 79 Gaps: 3.00 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/3_mltree/Q15475.raxml.rba Parallelization scheme autoconfig: 2 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 998 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 79 / 6320 [00:00:00] Data distribution: max. searches per worker: 10 Starting ML tree search with 20 distinct starting trees [00:00:00 -78986.964545] Initial branch length optimization [00:00:02 -60251.992016] Model parameter optimization (eps = 10.000000) [00:00:26 -60075.524145] AUTODETECT spr round 1 (radius: 5) [00:02:02 -40295.478199] AUTODETECT spr round 2 (radius: 10) [00:03:52 -30469.945459] AUTODETECT spr round 3 (radius: 15) [00:05:43 -23495.559648] AUTODETECT spr round 4 (radius: 20) [00:07:42 -19492.955015] AUTODETECT spr round 5 (radius: 25) [00:09:55 -17879.969163] SPR radius for FAST iterations: 25 (autodetect) [00:09:55 -17879.969163] Model parameter optimization (eps = 3.000000) [00:10:20 -17774.271179] FAST spr round 1 (radius: 25) [00:12:17 -15143.744292] FAST spr round 2 (radius: 25) [00:13:53 -14782.484094] FAST spr round 3 (radius: 25) [00:15:24 -14755.491273] FAST spr round 4 (radius: 25) [00:16:53 -14750.664480] FAST spr round 5 (radius: 25) [00:18:22 -14750.663024] Model parameter optimization (eps = 1.000000) [00:18:43 -14730.653999] SLOW spr round 1 (radius: 5) [00:20:11 -14722.063255] SLOW spr round 2 (radius: 5) [00:21:39 -14720.469268] SLOW spr round 3 (radius: 5) [00:23:08 -14720.116404] SLOW spr round 4 (radius: 5) [00:24:36 -14719.554329] SLOW spr round 5 (radius: 5) [00:26:04 -14719.554087] SLOW spr round 6 (radius: 10) [00:27:40 -14719.027019] SLOW spr round 7 (radius: 5) [00:29:17 -14715.586163] SLOW spr round 8 (radius: 5) [00:30:48 -14714.848094] SLOW spr round 9 (radius: 5) [00:32:18 -14714.847823] SLOW spr round 10 (radius: 10) [00:33:53 -14714.847620] SLOW spr round 11 (radius: 15) [00:35:44 -14713.651578] SLOW spr round 12 (radius: 5) [00:37:26 -14713.651130] SLOW spr round 13 (radius: 10) [00:39:05 -14711.078393] SLOW spr round 14 (radius: 5) [00:40:43 -14710.735247] SLOW spr round 15 (radius: 5) [00:42:14 -14710.734649] SLOW spr round 16 (radius: 10) [00:43:51 -14710.734287] SLOW spr round 17 (radius: 15) [00:45:45 -14706.416128] SLOW spr round 18 (radius: 5) [00:47:26 -14705.690978] SLOW spr round 19 (radius: 5) [00:48:58 -14705.690521] SLOW spr round 20 (radius: 10) [00:50:34 -14703.597544] SLOW spr round 21 (radius: 5) [00:52:09 -14703.597258] SLOW spr round 22 (radius: 10) [00:53:44 -14702.965595] SLOW spr round 23 (radius: 5) [00:55:18 -14702.964215] SLOW spr round 24 (radius: 10) [00:56:52 -14702.963976] SLOW spr round 25 (radius: 15) [00:58:42 -14702.963830] SLOW spr round 26 (radius: 20) [01:00:59 -14701.972002] SLOW spr round 27 (radius: 5) [01:02:42 -14701.774516] SLOW spr round 28 (radius: 5) [01:04:14 -14701.774203] SLOW spr round 29 (radius: 10) [01:05:49 -14701.392460] SLOW spr round 30 (radius: 5) [01:07:24 -14701.392295] SLOW spr round 31 (radius: 10) [01:08:58 -14701.392154] SLOW spr round 32 (radius: 15) [01:10:49 -14701.392004] SLOW spr round 33 (radius: 20) [01:13:05 -14701.391913] SLOW spr round 34 (radius: 25) [01:15:32 -14701.332480] Model parameter optimization (eps = 0.100000) [01:15:42] [worker #0] ML tree search #1, logLikelihood: -14700.932938 [01:15:42 -78925.899283] Initial branch length optimization [01:15:44 -60825.776435] Model parameter optimization (eps = 10.000000) [01:16:10 -60559.514003] AUTODETECT spr round 1 (radius: 5) [01:17:46 -41287.483842] AUTODETECT spr round 2 (radius: 10) [01:19:34 -30501.437158] AUTODETECT spr round 3 (radius: 15) [01:21:33 -23825.648662] AUTODETECT spr round 4 (radius: 20) [01:23:34 -18099.526978] AUTODETECT spr round 5 (radius: 25) [01:25:40 -16390.901865] SPR radius for FAST iterations: 25 (autodetect) [01:25:40 -16390.901865] Model parameter optimization (eps = 3.000000) [01:26:08 -16265.589446] FAST spr round 1 (radius: 25) [01:28:03 -14325.138814] FAST spr round 2 (radius: 25) [01:29:38 -13939.463671] FAST spr round 3 (radius: 25) [01:31:09 -13917.655457] FAST spr round 4 (radius: 25) [01:32:39 -13916.255696] FAST spr round 5 (radius: 25) [01:34:09 -13916.254243] Model parameter optimization (eps = 1.000000) [01:34:22 -13907.972202] SLOW spr round 1 (radius: 5) [01:35:51 -13905.514086] SLOW spr round 2 (radius: 5) [01:37:19 -13905.511418] SLOW spr round 3 (radius: 10) [01:38:19] [worker #1] ML tree search #2, logLikelihood: -13383.899078 [01:38:55 -13860.172091] SLOW spr round 4 (radius: 5) [01:40:32 -13849.864406] SLOW spr round 5 (radius: 5) [01:42:03 -13849.864275] SLOW spr round 6 (radius: 10) [01:43:41 -13849.864129] SLOW spr round 7 (radius: 15) [01:45:36 -13627.510644] SLOW spr round 8 (radius: 5) [01:47:18 -13442.996663] SLOW spr round 9 (radius: 5) [01:48:52 -13435.426787] SLOW spr round 10 (radius: 5) [01:50:24 -13435.426684] SLOW spr round 11 (radius: 10) [01:52:01 -13435.426641] SLOW spr round 12 (radius: 15) [01:53:54 -13429.615572] SLOW spr round 13 (radius: 5) [01:55:35 -13427.079070] SLOW spr round 14 (radius: 5) [01:57:07 -13426.604031] SLOW spr round 15 (radius: 5) [01:58:36 -13426.603913] SLOW spr round 16 (radius: 10) [02:00:12 -13426.603867] SLOW spr round 17 (radius: 15) [02:02:01 -13426.224259] SLOW spr round 18 (radius: 5) [02:03:40 -13426.224037] SLOW spr round 19 (radius: 10) [02:05:16 -13426.224033] SLOW spr round 20 (radius: 15) [02:07:04 -13426.223993] SLOW spr round 21 (radius: 20) [02:09:12 -13425.750053] SLOW spr round 22 (radius: 5) [02:10:53 -13425.749998] SLOW spr round 23 (radius: 10) [02:12:31 -13423.675628] SLOW spr round 24 (radius: 5) [02:14:05 -13423.675624] SLOW spr round 25 (radius: 10) [02:15:40 -13423.675622] SLOW spr round 26 (radius: 15) [02:17:26 -13423.675622] SLOW spr round 27 (radius: 20) [02:19:33 -13423.675622] SLOW spr round 28 (radius: 25) [02:22:05 -13374.139408] SLOW spr round 29 (radius: 5) [02:23:50 -13348.821983] SLOW spr round 30 (radius: 5) [02:25:26 -13331.649069] SLOW spr round 31 (radius: 5) [02:26:55 -13331.441357] SLOW spr round 32 (radius: 5) [02:28:22 -13331.441218] SLOW spr round 33 (radius: 10) [02:29:57 -13330.633919] SLOW spr round 34 (radius: 5) [02:31:32 -13329.624960] SLOW spr round 35 (radius: 5) [02:33:02 -13329.366573] SLOW spr round 36 (radius: 5) [02:34:30 -13329.363826] SLOW spr round 37 (radius: 10) [02:36:04 -13329.363714] SLOW spr round 38 (radius: 15) [02:37:52 -13327.836150] SLOW spr round 39 (radius: 5) [02:39:30 -13327.803573] SLOW spr round 40 (radius: 10) [02:41:07 -13327.803556] SLOW spr round 41 (radius: 15) [02:42:55 -13327.803552] SLOW spr round 42 (radius: 20) [02:45:09 -13327.287305] SLOW spr round 43 (radius: 5) [02:46:50 -13325.419815] SLOW spr round 44 (radius: 5) [02:48:21 -13325.277161] SLOW spr round 45 (radius: 5) [02:49:48 -13325.277161] SLOW spr round 46 (radius: 10) [02:51:23 -13325.277161] SLOW spr round 47 (radius: 15) [02:53:10 -13325.277161] SLOW spr round 48 (radius: 20) [02:55:23 -13325.277161] SLOW spr round 49 (radius: 25) [02:57:53 -13324.371796] SLOW spr round 50 (radius: 5) [02:59:34 -13323.256543] SLOW spr round 51 (radius: 5) [03:01:06 -13323.256536] SLOW spr round 52 (radius: 10) [03:02:40 -13323.256536] SLOW spr round 53 (radius: 15) [03:03:41] [worker #1] ML tree search #4, logLikelihood: -14525.210052 [03:04:27 -13323.256536] SLOW spr round 54 (radius: 20) [03:06:39 -13323.256536] SLOW spr round 55 (radius: 25) [03:09:09 -13323.256536] Model parameter optimization (eps = 0.100000) [03:09:21] [worker #0] ML tree search #3, logLikelihood: -13322.427045 [03:09:21 -79208.274709] Initial branch length optimization [03:09:23 -60771.240705] Model parameter optimization (eps = 10.000000) [03:09:53 -60529.342214] AUTODETECT spr round 1 (radius: 5) [03:11:30 -40291.609245] AUTODETECT spr round 2 (radius: 10) [03:13:18 -29869.135574] AUTODETECT spr round 3 (radius: 15) [03:15:18 -21775.238680] AUTODETECT spr round 4 (radius: 20) [03:17:30 -18209.675014] AUTODETECT spr round 5 (radius: 25) [03:19:55 -16251.917091] SPR radius for FAST iterations: 25 (autodetect) [03:19:55 -16251.917091] Model parameter optimization (eps = 3.000000) [03:20:15 -16189.396008] FAST spr round 1 (radius: 25) [03:22:07 -14297.815069] FAST spr round 2 (radius: 25) [03:23:46 -14099.737156] FAST spr round 3 (radius: 25) [03:25:21 -14081.434699] FAST spr round 4 (radius: 25) [03:26:50 -14081.432323] Model parameter optimization (eps = 1.000000) [03:27:21 -14030.598707] SLOW spr round 1 (radius: 5) [03:28:52 -14022.834833] SLOW spr round 2 (radius: 5) [03:30:24 -14020.828561] SLOW spr round 3 (radius: 5) [03:31:53 -14020.017672] SLOW spr round 4 (radius: 5) [03:33:23 -14020.017468] SLOW spr round 5 (radius: 10) [03:34:58 -14020.017460] SLOW spr round 6 (radius: 15) [03:36:52 -14020.017459] SLOW spr round 7 (radius: 20) [03:39:16 -14018.709634] SLOW spr round 8 (radius: 5) [03:40:59 -14017.982228] SLOW spr round 9 (radius: 5) [03:42:34 -14017.982210] SLOW spr round 10 (radius: 10) [03:44:09 -14013.674283] SLOW spr round 11 (radius: 5) [03:45:48 -14012.142843] SLOW spr round 12 (radius: 5) [03:47:18 -14012.142843] SLOW spr round 13 (radius: 10) [03:48:43] [worker #1] ML tree search #6, logLikelihood: -13295.944196 [03:48:53 -14012.142842] SLOW spr round 14 (radius: 15) [03:50:48 -14012.142842] SLOW spr round 15 (radius: 20) [03:53:12 -14012.142842] SLOW spr round 16 (radius: 25) [03:55:50 -13971.711794] SLOW spr round 17 (radius: 5) [03:57:37 -13965.391998] SLOW spr round 18 (radius: 5) [03:59:13 -13965.390836] SLOW spr round 19 (radius: 10) [04:00:48 -13965.390348] SLOW spr round 20 (radius: 15) [04:02:43 -13965.389920] SLOW spr round 21 (radius: 20) [04:05:05 -13962.582774] SLOW spr round 22 (radius: 5) [04:06:49 -13962.582754] SLOW spr round 23 (radius: 10) [04:08:30 -13962.582754] SLOW spr round 24 (radius: 15) [04:10:24 -13962.582754] SLOW spr round 25 (radius: 20) [04:12:47 -13962.582754] SLOW spr round 26 (radius: 25) [04:15:23 -13962.582754] Model parameter optimization (eps = 0.100000) [04:15:33] [worker #0] ML tree search #5, logLikelihood: -13962.474542 [04:15:33 -78918.764592] Initial branch length optimization [04:15:35 -60969.992478] Model parameter optimization (eps = 10.000000) [04:15:53 -60711.384679] AUTODETECT spr round 1 (radius: 5) [04:17:30 -41004.517374] AUTODETECT spr round 2 (radius: 10) [04:19:19 -29870.514932] AUTODETECT spr round 3 (radius: 15) [04:21:13 -22323.859565] AUTODETECT spr round 4 (radius: 20) [04:23:16 -18477.503001] AUTODETECT spr round 5 (radius: 25) [04:25:26 -16930.887501] SPR radius for FAST iterations: 25 (autodetect) [04:25:26 -16930.887501] Model parameter optimization (eps = 3.000000) [04:26:02 -16814.004411] FAST spr round 1 (radius: 25) [04:27:51 -14049.105723] FAST spr round 2 (radius: 25) [04:29:28 -13717.396382] FAST spr round 3 (radius: 25) [04:30:58 -13671.647555] FAST spr round 4 (radius: 25) [04:32:28 -13670.540646] FAST spr round 5 (radius: 25) [04:33:54 -13670.540192] Model parameter optimization (eps = 1.000000) [04:34:09 -13660.778316] SLOW spr round 1 (radius: 5) [04:35:38 -13659.431548] SLOW spr round 2 (radius: 5) [04:37:06 -13659.429197] SLOW spr round 3 (radius: 10) [04:38:42 -13659.428192] SLOW spr round 4 (radius: 15) [04:40:40 -13650.131018] SLOW spr round 5 (radius: 5) [04:42:22 -13644.847845] SLOW spr round 6 (radius: 5) [04:43:57 -13644.847511] SLOW spr round 7 (radius: 10) [04:45:35 -13644.680248] SLOW spr round 8 (radius: 5) [04:47:12 -13644.679945] SLOW spr round 9 (radius: 10) [04:48:49 -13643.718078] SLOW spr round 10 (radius: 5) [04:50:26 -13643.718020] SLOW spr round 11 (radius: 10) [04:52:02 -13643.717963] SLOW spr round 12 (radius: 15) [04:53:56 -13643.717876] SLOW spr round 13 (radius: 20) [04:56:27 -13643.717703] SLOW spr round 14 (radius: 25) [04:59:16 -13449.247146] SLOW spr round 15 (radius: 5) [05:01:02 -13363.797400] SLOW spr round 16 (radius: 5) [05:02:39 -13344.727994] SLOW spr round 17 (radius: 5) [05:04:11 -13343.645643] SLOW spr round 18 (radius: 5) [05:05:40 -13343.645396] SLOW spr round 19 (radius: 10) [05:07:16 -13331.602881] SLOW spr round 20 (radius: 5) [05:08:54 -13320.071285] SLOW spr round 21 (radius: 5) [05:10:23 -13320.071272] SLOW spr round 22 (radius: 10) [05:11:58 -13320.071267] SLOW spr round 23 (radius: 15) [05:13:51 -13320.071247] SLOW spr round 24 (radius: 20) [05:16:12 -13320.071246] SLOW spr round 25 (radius: 25) [05:19:00 -13320.071246] Model parameter optimization (eps = 0.100000) [05:19:12] [worker #0] ML tree search #7, logLikelihood: -13319.502042 [05:19:12 -78793.592598] Initial branch length optimization [05:19:14 -60690.340273] Model parameter optimization (eps = 10.000000) [05:19:37 -60443.488426] AUTODETECT spr round 1 (radius: 5) [05:21:14 -40377.777477] AUTODETECT spr round 2 (radius: 10) [05:23:01 -29079.631601] AUTODETECT spr round 3 (radius: 15) [05:24:24] [worker #1] ML tree search #8, logLikelihood: -13492.683879 [05:24:51 -22785.099653] AUTODETECT spr round 4 (radius: 20) [05:26:52 -19543.406732] AUTODETECT spr round 5 (radius: 25) [05:28:59 -18074.864338] SPR radius for FAST iterations: 25 (autodetect) [05:28:59 -18074.864338] Model parameter optimization (eps = 3.000000) [05:29:28 -17942.809250] FAST spr round 1 (radius: 25) [05:31:23 -14105.768457] FAST spr round 2 (radius: 25) [05:32:54 -13432.532826] FAST spr round 3 (radius: 25) [05:34:22 -13370.964903] FAST spr round 4 (radius: 25) [05:35:49 -13366.266473] FAST spr round 5 (radius: 25) [05:37:15 -13366.266200] Model parameter optimization (eps = 1.000000) [05:37:33 -13343.440917] SLOW spr round 1 (radius: 5) [05:39:00 -13338.585211] SLOW spr round 2 (radius: 5) [05:40:28 -13337.693293] SLOW spr round 3 (radius: 5) [05:41:54 -13337.334126] SLOW spr round 4 (radius: 5) [05:43:18 -13337.333927] SLOW spr round 5 (radius: 10) [05:44:51 -13333.660845] SLOW spr round 6 (radius: 5) [05:46:27 -13328.623299] SLOW spr round 7 (radius: 5) [05:47:55 -13326.394734] SLOW spr round 8 (radius: 5) [05:49:20 -13326.394635] SLOW spr round 9 (radius: 10) [05:50:53 -13324.403876] SLOW spr round 10 (radius: 5) [05:52:24 -13324.403174] SLOW spr round 11 (radius: 10) [05:53:57 -13324.403095] SLOW spr round 12 (radius: 15) [05:55:49 -13322.391975] SLOW spr round 13 (radius: 5) [05:57:26 -13322.391972] SLOW spr round 14 (radius: 10) [05:59:00 -13320.356606] SLOW spr round 15 (radius: 5) [06:00:32 -13320.356553] SLOW spr round 16 (radius: 10) [06:02:04 -13320.356553] SLOW spr round 17 (radius: 15) [06:03:54 -13320.356553] SLOW spr round 18 (radius: 20) [06:06:22 -13318.691585] SLOW spr round 19 (radius: 5) [06:08:03 -13318.663463] SLOW spr round 20 (radius: 10) [06:09:41 -13318.663204] SLOW spr round 21 (radius: 15) [06:11:32 -13318.663163] SLOW spr round 22 (radius: 20) [06:13:58 -13318.663156] SLOW spr round 23 (radius: 25) [06:16:59 -13314.832825] SLOW spr round 24 (radius: 5) [06:18:43 -13314.706293] SLOW spr round 25 (radius: 5) [06:20:15 -13314.706153] SLOW spr round 26 (radius: 10) [06:21:50 -13314.706128] SLOW spr round 27 (radius: 15) [06:23:42 -13314.688765] SLOW spr round 28 (radius: 20) [06:26:04 -13314.688764] SLOW spr round 29 (radius: 25) [06:28:48 -13314.688763] Model parameter optimization (eps = 0.100000) [06:29:03] [worker #0] ML tree search #9, logLikelihood: -13314.266866 [06:29:03 -78808.377302] Initial branch length optimization [06:29:05 -60436.698959] Model parameter optimization (eps = 10.000000) [06:29:36 -60178.522181] AUTODETECT spr round 1 (radius: 5) [06:31:14 -40517.476219] AUTODETECT spr round 2 (radius: 10) [06:33:02 -28695.795893] AUTODETECT spr round 3 (radius: 15) [06:35:02 -21957.591655] AUTODETECT spr round 4 (radius: 20) [06:37:05 -18940.983779] AUTODETECT spr round 5 (radius: 25) [06:39:06 -17533.463960] SPR radius for FAST iterations: 25 (autodetect) [06:39:06 -17533.463960] Model parameter optimization (eps = 3.000000) [06:39:46 -17373.628257] FAST spr round 1 (radius: 25) [06:41:39 -15018.595227] FAST spr round 2 (radius: 25) [06:43:17 -14670.796474] FAST spr round 3 (radius: 25) [06:44:42] [worker #1] ML tree search #10, logLikelihood: -13292.164021 [06:44:49 -14453.791139] FAST spr round 4 (radius: 25) [06:46:22 -14035.583448] FAST spr round 5 (radius: 25) [06:47:52 -14016.810479] FAST spr round 6 (radius: 25) [06:49:20 -14011.323918] FAST spr round 7 (radius: 25) [06:50:47 -14011.122454] FAST spr round 8 (radius: 25) [06:52:14 -14011.122391] Model parameter optimization (eps = 1.000000) [06:52:36 -14001.676209] SLOW spr round 1 (radius: 5) [06:54:06 -13999.071286] SLOW spr round 2 (radius: 5) [06:55:36 -13997.590866] SLOW spr round 3 (radius: 5) [06:57:03 -13997.590689] SLOW spr round 4 (radius: 10) [06:58:40 -13982.997071] SLOW spr round 5 (radius: 5) [07:00:17 -13980.119822] SLOW spr round 6 (radius: 5) [07:01:46 -13980.119634] SLOW spr round 7 (radius: 10) [07:03:21 -13980.119567] SLOW spr round 8 (radius: 15) [07:05:17 -13973.125369] SLOW spr round 9 (radius: 5) [07:07:01 -13970.811391] SLOW spr round 10 (radius: 5) [07:08:37 -13969.668629] SLOW spr round 11 (radius: 5) [07:10:05 -13969.668527] SLOW spr round 12 (radius: 10) [07:11:41 -13968.811789] SLOW spr round 13 (radius: 5) [07:13:17 -13968.811788] SLOW spr round 14 (radius: 10) [07:14:54 -13935.576104] SLOW spr round 15 (radius: 5) [07:16:33 -13935.307504] SLOW spr round 16 (radius: 5) [07:18:04 -13935.306165] SLOW spr round 17 (radius: 10) [07:19:39 -13935.305912] SLOW spr round 18 (radius: 15) [07:21:34 -13930.809314] SLOW spr round 19 (radius: 5) [07:23:17 -13930.230910] SLOW spr round 20 (radius: 5) [07:24:51 -13930.230904] SLOW spr round 21 (radius: 10) [07:26:28 -13930.230901] SLOW spr round 22 (radius: 15) [07:28:22 -13930.230900] SLOW spr round 23 (radius: 20) [07:30:46 -13930.230900] SLOW spr round 24 (radius: 25) [07:33:25 -13895.728132] SLOW spr round 25 (radius: 5) [07:35:08 -13895.575606] SLOW spr round 26 (radius: 5) [07:36:42 -13895.575554] SLOW spr round 27 (radius: 10) [07:38:18 -13895.575553] SLOW spr round 28 (radius: 15) [07:40:10 -13885.549922] SLOW spr round 29 (radius: 5) [07:41:52 -13832.503096] SLOW spr round 30 (radius: 5) [07:43:24 -13832.503083] SLOW spr round 31 (radius: 10) [07:44:59 -13832.503081] SLOW spr round 32 (radius: 15) [07:45:24] [worker #1] ML tree search #12, logLikelihood: -13985.523500 [07:46:50 -13832.503081] SLOW spr round 33 (radius: 20) [07:49:14 -13832.503080] SLOW spr round 34 (radius: 25) [07:51:52 -13830.622112] SLOW spr round 35 (radius: 5) [07:53:36 -13830.386945] SLOW spr round 36 (radius: 5) [07:55:10 -13830.386923] SLOW spr round 37 (radius: 10) [07:56:46 -13830.386923] SLOW spr round 38 (radius: 15) [07:58:37 -13830.386922] SLOW spr round 39 (radius: 20) [08:01:01 -13830.386922] SLOW spr round 40 (radius: 25) [08:03:39 -13830.386921] Model parameter optimization (eps = 0.100000) [08:03:47] [worker #0] ML tree search #11, logLikelihood: -13830.186835 [08:03:47 -79064.481261] Initial branch length optimization [08:03:49 -60512.526338] Model parameter optimization (eps = 10.000000) [08:04:14 -60258.258463] AUTODETECT spr round 1 (radius: 5) [08:05:54 -41462.376170] AUTODETECT spr round 2 (radius: 10) [08:07:43 -30460.152244] AUTODETECT spr round 3 (radius: 15) [08:09:40 -23964.920246] AUTODETECT spr round 4 (radius: 20) [08:11:43 -20106.302112] AUTODETECT spr round 5 (radius: 25) [08:14:00 -17865.701356] SPR radius for FAST iterations: 25 (autodetect) [08:14:00 -17865.701356] Model parameter optimization (eps = 3.000000) [08:14:38 -17742.585024] FAST spr round 1 (radius: 25) [08:16:33 -14777.757480] FAST spr round 2 (radius: 25) [08:18:12 -13946.055220] FAST spr round 3 (radius: 25) [08:19:47 -13844.510670] FAST spr round 4 (radius: 25) [08:21:19 -13834.278579] FAST spr round 5 (radius: 25) [08:22:49 -13834.276583] Model parameter optimization (eps = 1.000000) [08:23:04 -13809.325675] SLOW spr round 1 (radius: 5) [08:24:35 -13800.197250] SLOW spr round 2 (radius: 5) [08:26:06 -13797.014971] SLOW spr round 3 (radius: 5) [08:27:38 -13797.013618] SLOW spr round 4 (radius: 10) [08:29:14 -13796.695082] SLOW spr round 5 (radius: 5) [08:30:54 -13792.368693] SLOW spr round 6 (radius: 5) [08:32:26 -13792.368555] SLOW spr round 7 (radius: 10) [08:34:03 -13792.064594] SLOW spr round 8 (radius: 5) [08:35:42 -13792.064376] SLOW spr round 9 (radius: 10) [08:37:20 -13790.470142] SLOW spr round 10 (radius: 5) [08:38:59 -13790.469899] SLOW spr round 11 (radius: 10) [08:40:36 -13790.469744] SLOW spr round 12 (radius: 15) [08:42:32 -13679.292351] SLOW spr round 13 (radius: 5) [08:44:15 -13676.687565] SLOW spr round 14 (radius: 5) [08:45:51 -13675.675057] SLOW spr round 15 (radius: 5) [08:47:21 -13675.675015] SLOW spr round 16 (radius: 10) [08:48:58 -13675.674974] SLOW spr round 17 (radius: 15) [08:50:51 -13675.674967] SLOW spr round 18 (radius: 20) [08:53:19 -13662.096201] SLOW spr round 19 (radius: 5) [08:55:05 -13641.314156] SLOW spr round 20 (radius: 5) [08:56:39 -13641.143764] SLOW spr round 21 (radius: 5) [08:58:08 -13641.143760] SLOW spr round 22 (radius: 10) [08:59:44 -13638.716442] SLOW spr round 23 (radius: 5) [09:01:19 -13638.716434] SLOW spr round 24 (radius: 10) [09:02:55 -13638.352849] SLOW spr round 25 (radius: 5) [09:04:31 -13637.649927] SLOW spr round 26 (radius: 5) [09:06:00 -13637.649921] SLOW spr round 27 (radius: 10) [09:07:35 -13637.649920] SLOW spr round 28 (radius: 15) [09:09:30 -13636.498917] SLOW spr round 29 (radius: 5) [09:11:10 -13636.498875] SLOW spr round 30 (radius: 10) [09:12:49 -13633.957594] SLOW spr round 31 (radius: 5) [09:14:26 -13626.539014] SLOW spr round 32 (radius: 5) [09:15:54 -13626.538206] SLOW spr round 33 (radius: 10) [09:17:04] [worker #1] ML tree search #14, logLikelihood: -13678.886127 [09:17:32 -13626.538167] SLOW spr round 34 (radius: 15) [09:19:25 -13626.538165] SLOW spr round 35 (radius: 20) [09:21:50 -13626.538163] SLOW spr round 36 (radius: 25) [09:24:36 -13626.538162] Model parameter optimization (eps = 0.100000) [09:24:47] [worker #0] ML tree search #13, logLikelihood: -13626.432236 [09:24:47 -78613.902986] Initial branch length optimization [09:24:49 -60721.462682] Model parameter optimization (eps = 10.000000) [09:25:25 -60290.239545] AUTODETECT spr round 1 (radius: 5) [09:27:04 -40910.121278] AUTODETECT spr round 2 (radius: 10) [09:29:02 -29455.581822] AUTODETECT spr round 3 (radius: 15) [09:31:06 -22301.402517] AUTODETECT spr round 4 (radius: 20) [09:33:07 -20224.577941] AUTODETECT spr round 5 (radius: 25) [09:35:16 -19324.227262] SPR radius for FAST iterations: 25 (autodetect) [09:35:16 -19324.227262] Model parameter optimization (eps = 3.000000) [09:35:46 -19161.064243] FAST spr round 1 (radius: 25) [09:37:47 -15494.260942] FAST spr round 2 (radius: 25) [09:39:26 -14804.201133] FAST spr round 3 (radius: 25) [09:40:59 -14540.643908] FAST spr round 4 (radius: 25) [09:42:27 -14539.221597] FAST spr round 5 (radius: 25) [09:43:54 -14539.220621] Model parameter optimization (eps = 1.000000) [09:44:11 -14517.119388] SLOW spr round 1 (radius: 5) [09:45:39 -14514.794970] SLOW spr round 2 (radius: 5) [09:47:07 -14514.551768] SLOW spr round 3 (radius: 5) [09:48:32 -14514.551081] SLOW spr round 4 (radius: 10) [09:50:06 -14512.202906] SLOW spr round 5 (radius: 5) [09:51:42 -14510.649794] SLOW spr round 6 (radius: 5) [09:53:09 -14510.649192] SLOW spr round 7 (radius: 10) [09:54:41 -14510.649073] SLOW spr round 8 (radius: 15) [09:56:44 -14492.550130] SLOW spr round 9 (radius: 5) [09:58:26 -14472.213594] SLOW spr round 10 (radius: 5) [09:59:59 -14471.638950] SLOW spr round 11 (radius: 5) [10:01:27 -14470.140381] SLOW spr round 12 (radius: 5) [10:02:52 -14470.140351] SLOW spr round 13 (radius: 10) [10:04:25 -14467.960946] SLOW spr round 14 (radius: 5) [10:06:01 -14467.601972] SLOW spr round 15 (radius: 5) [10:07:28 -14467.601874] SLOW spr round 16 (radius: 10) [10:09:00 -14467.601874] SLOW spr round 17 (radius: 15) [10:11:02 -14465.229462] SLOW spr round 18 (radius: 5) [10:12:42 -14464.827726] SLOW spr round 19 (radius: 5) [10:14:13 -14464.804759] SLOW spr round 20 (radius: 10) [10:15:46 -14464.804656] SLOW spr round 21 (radius: 15) [10:17:47 -14464.804653] SLOW spr round 22 (radius: 20) [10:20:40 -14397.268495] SLOW spr round 23 (radius: 5) [10:22:22 -14397.267855] SLOW spr round 24 (radius: 10) [10:24:02 -14397.267841] SLOW spr round 25 (radius: 15) [10:26:02 -14397.166090] SLOW spr round 26 (radius: 5) [10:27:42 -14397.164553] SLOW spr round 27 (radius: 10) [10:29:21 -14397.164499] SLOW spr round 28 (radius: 15) [10:31:20 -14397.164497] SLOW spr round 29 (radius: 20) [10:34:10 -14397.164496] SLOW spr round 30 (radius: 25) [10:37:28 -14337.197143] SLOW spr round 31 (radius: 5) [10:39:11 -14336.655839] SLOW spr round 32 (radius: 5) [10:40:44 -14336.655838] SLOW spr round 33 (radius: 10) [10:42:18 -14335.374872] SLOW spr round 34 (radius: 5) [10:43:54 -14335.094042] SLOW spr round 35 (radius: 5) [10:45:22 -14335.093878] SLOW spr round 36 (radius: 10) [10:46:55 -14335.093870] SLOW spr round 37 (radius: 15) [10:49:04 -13896.807411] SLOW spr round 38 (radius: 5) [10:50:46 -13462.234540] SLOW spr round 39 (radius: 5) [10:52:19 -13425.336632] SLOW spr round 40 (radius: 5) [10:53:47 -13424.201786] SLOW spr round 41 (radius: 5) [10:55:12 -13423.352967] SLOW spr round 42 (radius: 5) [10:56:36 -13422.686658] SLOW spr round 43 (radius: 5) [10:56:52] [worker #1] ML tree search #16, logLikelihood: -13302.408833 [10:58:00 -13422.686636] SLOW spr round 44 (radius: 10) [10:59:33 -13413.677754] SLOW spr round 45 (radius: 5) [11:01:07 -13413.677721] SLOW spr round 46 (radius: 10) [11:02:42 -13413.677717] SLOW spr round 47 (radius: 15) [11:04:39 -13411.402501] SLOW spr round 48 (radius: 5) [11:06:17 -13411.402477] SLOW spr round 49 (radius: 10) [11:07:55 -13410.842634] SLOW spr round 50 (radius: 5) [11:09:29 -13410.842632] SLOW spr round 51 (radius: 10) [11:11:03 -13410.842632] SLOW spr round 52 (radius: 15) [11:12:58 -13410.842632] SLOW spr round 53 (radius: 20) [11:15:29 -13410.842632] SLOW spr round 54 (radius: 25) [11:18:21 -13410.842632] Model parameter optimization (eps = 0.100000) [11:18:39] [worker #0] ML tree search #15, logLikelihood: -13406.287595 [11:18:39 -78521.618970] Initial branch length optimization [11:18:41 -60038.231392] Model parameter optimization (eps = 10.000000) [11:19:20 -59688.435346] AUTODETECT spr round 1 (radius: 5) [11:20:58 -41015.493476] AUTODETECT spr round 2 (radius: 10) [11:22:55 -30897.138963] AUTODETECT spr round 3 (radius: 15) [11:25:00 -22877.313128] AUTODETECT spr round 4 (radius: 20) [11:27:12 -19003.793470] AUTODETECT spr round 5 (radius: 25) [11:29:57 -16204.952465] SPR radius for FAST iterations: 25 (autodetect) [11:29:57 -16204.952465] Model parameter optimization (eps = 3.000000) [11:30:29 -15950.590969] FAST spr round 1 (radius: 25) [11:32:24 -13860.123547] FAST spr round 2 (radius: 25) [11:33:58 -13466.291923] FAST spr round 3 (radius: 25) [11:35:28 -13454.231581] FAST spr round 4 (radius: 25) [11:36:55 -13453.566156] FAST spr round 5 (radius: 25) [11:38:22 -13453.566067] Model parameter optimization (eps = 1.000000) [11:38:36 -13445.067177] SLOW spr round 1 (radius: 5) [11:40:04 -13442.746677] SLOW spr round 2 (radius: 5) [11:41:32 -13442.746187] SLOW spr round 3 (radius: 10) [11:43:07 -13431.662188] SLOW spr round 4 (radius: 5) [11:44:44 -13429.548970] SLOW spr round 5 (radius: 5) [11:46:14 -13429.244218] SLOW spr round 6 (radius: 5) [11:47:42 -13429.244147] SLOW spr round 7 (radius: 10) [11:49:16 -13429.243736] SLOW spr round 8 (radius: 15) [11:51:12 -13424.530594] SLOW spr round 9 (radius: 5) [11:52:53 -13424.489429] SLOW spr round 10 (radius: 10) [11:54:31 -13424.489270] SLOW spr round 11 (radius: 15) [11:56:24 -13424.489250] SLOW spr round 12 (radius: 20) [11:59:00 -13424.352581] SLOW spr round 13 (radius: 5) [12:00:43 -13424.352454] SLOW spr round 14 (radius: 10) [12:02:25 -13424.352342] SLOW spr round 15 (radius: 15) [12:04:18 -13424.352333] SLOW spr round 16 (radius: 20) [12:06:52 -13424.352312] SLOW spr round 17 (radius: 25) [12:10:01 -13415.558946] SLOW spr round 18 (radius: 5) [12:11:47 -13409.303591] SLOW spr round 19 (radius: 5) [12:13:21 -13408.368946] SLOW spr round 20 (radius: 5) [12:14:50 -13408.368838] SLOW spr round 21 (radius: 10) [12:16:25 -13408.368801] SLOW spr round 22 (radius: 15) [12:18:19 -13405.710930] SLOW spr round 23 (radius: 5) [12:19:58 -13405.710471] SLOW spr round 24 (radius: 10) [12:21:35 -13405.710463] SLOW spr round 25 (radius: 15) [12:23:28 -13405.710462] SLOW spr round 26 (radius: 20) [12:26:02 -13405.710462] SLOW spr round 27 (radius: 25) [12:29:09 -13405.710462] Model parameter optimization (eps = 0.100000) [12:29:31] [worker #0] ML tree search #17, logLikelihood: -13404.307335 [12:29:31 -78266.771400] Initial branch length optimization [12:29:33 -60094.384315] Model parameter optimization (eps = 10.000000) [12:29:56 -59862.815506] AUTODETECT spr round 1 (radius: 5) [12:31:39 -40723.649735] AUTODETECT spr round 2 (radius: 10) [12:33:27 -30820.392534] AUTODETECT spr round 3 (radius: 15) [12:35:19 -24294.629734] AUTODETECT spr round 4 (radius: 20) [12:37:20 -20325.868163] AUTODETECT spr round 5 (radius: 25) [12:39:40 -18580.888653] SPR radius for FAST iterations: 25 (autodetect) [12:39:40 -18580.888653] Model parameter optimization (eps = 3.000000) [12:40:00 -18528.609239] FAST spr round 1 (radius: 25) [12:40:24] [worker #1] ML tree search #18, logLikelihood: -13641.330988 [12:41:57 -14378.409932] FAST spr round 2 (radius: 25) [12:43:34 -13593.912873] FAST spr round 3 (radius: 25) [12:45:07 -13555.319171] FAST spr round 4 (radius: 25) [12:46:35 -13554.271072] FAST spr round 5 (radius: 25) [12:48:02 -13554.270093] Model parameter optimization (eps = 1.000000) [12:48:24 -13505.849819] SLOW spr round 1 (radius: 5) [12:49:55 -13497.068490] SLOW spr round 2 (radius: 5) [12:51:25 -13490.258624] SLOW spr round 3 (radius: 5) [12:52:55 -13489.228407] SLOW spr round 4 (radius: 5) [12:54:24 -13489.224873] SLOW spr round 5 (radius: 10) [12:56:02 -13487.387734] SLOW spr round 6 (radius: 5) [12:57:42 -13485.191696] SLOW spr round 7 (radius: 5) [12:59:15 -13483.391783] SLOW spr round 8 (radius: 5) [13:00:45 -13483.391485] SLOW spr round 9 (radius: 10) [13:02:22 -13482.397406] SLOW spr round 10 (radius: 5) [13:03:59 -13482.397374] SLOW spr round 11 (radius: 10) [13:05:36 -13482.397365] SLOW spr round 12 (radius: 15) [13:07:27 -13482.242084] SLOW spr round 13 (radius: 5) [13:09:09 -13482.241919] SLOW spr round 14 (radius: 10) [13:10:48 -13481.205205] SLOW spr round 15 (radius: 5) [13:12:24 -13481.205100] SLOW spr round 16 (radius: 10) [13:14:00 -13481.205085] SLOW spr round 17 (radius: 15) [13:15:50 -13481.205083] SLOW spr round 18 (radius: 20) [13:18:11 -13481.205082] SLOW spr round 19 (radius: 25) [13:20:50 -13481.205082] Model parameter optimization (eps = 0.100000) [13:21:05] [worker #0] ML tree search #19, logLikelihood: -13478.381214 [14:14:25] [worker #1] ML tree search #20, logLikelihood: -13348.620156 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.291338,0.416236) (0.225278,1.128425) (0.292586,0.751999) (0.190799,2.120046) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -13292.164021 AIC score: 30582.328042 / AICc score: 8026582.328042 / BIC score: 35318.854299 Free parameters (model + branch lengths): 1999 WARNING: Number of free parameters (K=1999) is larger than alignment size (n=79). This might lead to overfitting and compromise tree inference results! Best ML tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/3_mltree/Q15475.raxml.bestTree All ML trees saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/3_mltree/Q15475.raxml.mlTrees Optimized model saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/3_mltree/Q15475.raxml.bestModel Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/Q15475/3_mltree/Q15475.raxml.log Analysis started: 18-Jun-2021 16:43:04 / finished: 19-Jun-2021 06:57:30 Elapsed time: 51266.316 seconds