RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 02-Jun-2021 15:07:37 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/2_msa/Q15437_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/3_mltree/Q15437.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/4_raxmlng_ancestral/Q15437 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622635657 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/2_msa/Q15437_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 767 sites WARNING: Sequences sp_Q01405_SC23A_MOUSE_10090 and tr_B5DFC3_B5DFC3_RAT_10116 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_A0A287D571_A0A287D571_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_F1SHL3_F1SHL3_PIG_9823 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_D2H485_D2H485_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_M3WPR4_M3WPR4_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_A0A1U7TYZ4_A0A1U7TYZ4_TARSY_1868482 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_A0A2U4AF04_A0A2U4AF04_TURTR_9739 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_A0A2U3ZF31_A0A2U3ZF31_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_A0A2Y9L2L5_A0A2Y9L2L5_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_A0A2Y9F930_A0A2Y9F930_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3YXT0_M3YXT0_MUSPF_9669 and tr_A0A384CBA4_A0A384CBA4_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_G3QFP7_G3QFP7_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_H2Q876_H2Q876_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_F7EJF0_F7EJF0_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_G7PA49_G7PA49_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_A0A096NUP0_A0A096NUP0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_A0A0D9RSB5_A0A0D9RSB5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_A0A2K5MMD3_A0A2K5MMD3_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QV74_G1QV74_NOMLE_61853 and tr_A0A2K6CG64_A0A2K6CG64_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q1DY01_SEC23_COCIM_246410 and tr_E9DDP3_E9DDP3_COCPS_443226 are exactly identical! WARNING: Sequences sp_Q1DY01_SEC23_COCIM_246410 and tr_A0A0J6Y8H0_A0A0J6Y8H0_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6QNP1_B6QNP1_TALMQ_441960 and tr_A0A093UT54_A0A093UT54_TALMA_1077442 are exactly identical! WARNING: Sequences tr_G3SI15_G3SI15_GORGO_9595 and tr_A0A2J8VDE3_A0A2J8VDE3_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3SI15_G3SI15_GORGO_9595 and sp_Q15437_SC23B_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9C284_SEC23_NEUCR_367110 and tr_G4UFZ6_G4UFZ6_NEUT9_510952 are exactly identical! WARNING: Sequences tr_B8MY76_B8MY76_ASPFN_332952 and sp_Q2URM9_SEC23_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8MY76_B8MY76_ASPFN_332952 and tr_A0A1S9DVG3_A0A1S9DVG3_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_F6V2R0_F6V2R0_CANLF_9615 and sp_A2VDL8_SC23A_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F6V2R0_F6V2R0_CANLF_9615 and tr_F1MVW5_F1MVW5_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G2HFR5_G2HFR5_PANTR_9598 and tr_A0A2R8ZQH3_A0A2R8ZQH3_PANPA_9597 are exactly identical! WARNING: Sequences tr_J5JDA2_J5JDA2_BEAB2_655819 and tr_A0A0A2VI82_A0A0A2VI82_BEABA_1245745 are exactly identical! WARNING: Sequences tr_A0A158NAM2_A0A158NAM2_ATTCE_12957 and tr_F4W6V1_F4W6V1_ACREC_103372 are exactly identical! WARNING: Sequences tr_G7XP74_G7XP74_ASPKW_1033177 and tr_G3XS53_G3XS53_ASPNA_380704 are exactly identical! WARNING: Sequences tr_G7XP74_G7XP74_ASPKW_1033177 and tr_A0A100I2T0_A0A100I2T0_ASPNG_5061 are exactly identical! WARNING: Sequences tr_G7XP74_G7XP74_ASPKW_1033177 and tr_A0A146FQH4_A0A146FQH4_9EURO_1069201 are exactly identical! WARNING: Sequences tr_G7XP74_G7XP74_ASPKW_1033177 and tr_A0A1L9NCI9_A0A1L9NCI9_ASPTU_767770 are exactly identical! WARNING: Sequences tr_G7XP74_G7XP74_ASPKW_1033177 and tr_A0A318ZW40_A0A318ZW40_9EURO_1450533 are exactly identical! WARNING: Sequences tr_A2ZDV4_A2ZDV4_ORYSI_39946 and tr_I1QZR8_I1QZR8_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A2ZDV4_A2ZDV4_ORYSI_39946 and tr_A0A0E0BIK6_A0A0E0BIK6_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_F4NRQ0_F4NRQ0_BATDJ_684364 and tr_A0A177WAM9_A0A177WAM9_BATDE_403673 are exactly identical! WARNING: Sequences tr_F9XNV8_F9XNV8_ZYMTI_336722 and tr_A0A1X7S7X7_A0A1X7S7X7_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_F7E2V1_F7E2V1_XENTR_8364 and sp_Q05AS9_SC23A_XENTR_8364 are exactly identical! WARNING: Sequences tr_G0RV87_G0RV87_HYPJQ_431241 and tr_A0A2T4CE73_A0A2T4CE73_TRILO_983965 are exactly identical! WARNING: Sequences tr_A0A0D2XJV0_A0A0D2XJV0_FUSO4_426428 and tr_N4TI31_N4TI31_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_A0A0D2XJV0_A0A0D2XJV0_FUSO4_426428 and tr_X0CL95_X0CL95_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_A0A0D2XJV0_A0A0D2XJV0_FUSO4_426428 and tr_A0A2H3SYI4_A0A2H3SYI4_FUSOX_5507 are exactly identical! WARNING: Sequences tr_A0A0D2XJV0_A0A0D2XJV0_FUSO4_426428 and tr_A0A2H3HHW3_A0A2H3HHW3_FUSOX_327505 are exactly identical! WARNING: Sequences tr_A0A0D2XJV0_A0A0D2XJV0_FUSO4_426428 and tr_A0A2K0UT39_A0A2K0UT39_GIBNY_42673 are exactly identical! WARNING: Sequences tr_A0A0D2XJV0_A0A0D2XJV0_FUSO4_426428 and tr_A0A365MZL0_A0A365MZL0_GIBIN_948311 are exactly identical! WARNING: Sequences tr_Q9BE95_Q9BE95_MACFA_9541 and tr_A0A096NVP4_A0A096NVP4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q9BE95_Q9BE95_MACFA_9541 and tr_A0A2K6BPK6_A0A2K6BPK6_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q9BE95_Q9BE95_MACFA_9541 and tr_A0A2K5YKD6_A0A2K5YKD6_MANLE_9568 are exactly identical! WARNING: Sequences tr_U3JUH5_U3JUH5_FICAL_59894 and tr_A0A091F586_A0A091F586_CORBR_85066 are exactly identical! WARNING: Sequences tr_V2X6T3_V2X6T3_MONRO_1381753 and tr_A0A0W0FSC1_A0A0W0FSC1_9AGAR_221103 are exactly identical! WARNING: Sequences tr_W2Q187_W2Q187_PHYPN_761204 and tr_W2KXP2_W2KXP2_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A094ELV6_A0A094ELV6_9PEZI_1420912 and tr_A0A2P2SVZ9_A0A2P2SVZ9_9PEZI_342668 are exactly identical! WARNING: Sequences tr_V4U4Z9_V4U4Z9_9ROSI_85681 and tr_A0A2H5PMI9_A0A2H5PMI9_CITUN_55188 are exactly identical! WARNING: Sequences tr_J3JX23_J3JX23_DENPD_77166 and tr_U4TRT6_U4TRT6_DENPD_77166 are exactly identical! WARNING: Sequences tr_A0A0F0I2W5_A0A0F0I2W5_ASPPU_1403190 and tr_A0A2G7GAY8_A0A2G7GAY8_9EURO_656916 are exactly identical! WARNING: Sequences tr_A0A0A1NI69_A0A0A1NI69_9FUNG_58291 and tr_A0A2G4T3L9_A0A2G4T3L9_9FUNG_1340429 are exactly identical! WARNING: Sequences tr_A0A091JR90_A0A091JR90_EGRGA_188379 and tr_A0A099YVW0_A0A099YVW0_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A091JR90_A0A091JR90_EGRGA_188379 and tr_A0A0A0APC8_A0A0A0APC8_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091JR90_A0A091JR90_EGRGA_188379 and tr_A0A2I0MNK0_A0A2I0MNK0_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A0G4PGA7_A0A0G4PGA7_PENCA_1429867 and tr_A0A1V6QT23_A0A1V6QT23_9EURO_60172 are exactly identical! WARNING: Sequences tr_A0A0V1LSV2_A0A0V1LSV2_9BILA_6335 and tr_A0A0V1PGJ9_A0A0V1PGJ9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A1S3ZN00_A0A1S3ZN00_TOBAC_4097 and tr_A0A1U7YII8_A0A1U7YII8_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1Y2H4M7_A0A1Y2H4M7_9FUNG_765915 and tr_A0A1Y2H7Q4_A0A1Y2H7Q4_9FUNG_765915 are exactly identical! WARNING: Sequences tr_A0A2H3CGP1_A0A2H3CGP1_9AGAR_1076256 and tr_A0A284RMD0_A0A284RMD0_9AGAR_47428 are exactly identical! WARNING: Sequences tr_A0A2D0RMS2_A0A2D0RMS2_ICTPU_7998 and tr_W5ULA6_W5ULA6_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2I1ENY4_A0A2I1ENY4_9GLOM_588596 and tr_A0A2H5TI30_A0A2H5TI30_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A2V5HZ36_A0A2V5HZ36_9EURO_1450541 and tr_A0A2V5GWM5_A0A2V5GWM5_9EURO_1450538 are exactly identical! WARNING: Duplicate sequences found: 71 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/4_raxmlng_ancestral/Q15437.raxml.reduced.phy Alignment comprises 1 partitions and 767 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 767 Gaps: 3.24 % Invariant sites: 1.83 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/4_raxmlng_ancestral/Q15437.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/3_mltree/Q15437.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 192 / 15360 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -195133.900457 [00:00:00 -195133.900457] Initial branch length optimization [00:00:01 -195003.072532] Model parameter optimization (eps = 0.100000) [00:00:38] Tree #1, final logLikelihood: -193977.164249 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.299051,0.515919) (0.305556,0.740671) (0.253046,1.016909) (0.142346,2.543601) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/4_raxmlng_ancestral/Q15437.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/4_raxmlng_ancestral/Q15437.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/4_raxmlng_ancestral/Q15437.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q15437/4_raxmlng_ancestral/Q15437.raxml.log Analysis started: 02-Jun-2021 15:07:37 / finished: 02-Jun-2021 15:08:22 Elapsed time: 45.227 seconds