RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 13:36:49 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/2_msa/Q14721_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/3_mltree/Q14721.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/4_raxmlng_ancestral/Q14721 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622803009 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/2_msa/Q14721_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 858 sites WARNING: Sequences tr_M3Y2V0_M3Y2V0_MUSPF_9669 and tr_A0A2Y9JK49_A0A2Y9JK49_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Z1H2_M3Z1H2_MUSPF_9669 and tr_A0A2Y9IPH8_A0A2Y9IPH8_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Z7R2_M3Z7R2_MUSPF_9669 and tr_G1MN46_G1MN46_AILME_9646 are exactly identical! WARNING: Sequences tr_M3Z7R2_M3Z7R2_MUSPF_9669 and tr_A0A2Y9JF10_A0A2Y9JF10_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Z7R2_M3Z7R2_MUSPF_9669 and tr_A0A384BXW5_A0A384BXW5_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_G3QEX6_G3QEX6_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_H2P2B0_H2P2B0_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_H2R2Y3_H2R2Y3_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and sp_Q9UIX4_KCNG1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_F6Z0A7_F6Z0A7_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_A0A096NNN4_A0A096NNN4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_A0A0D9RRT0_A0A0D9RRT0_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_A0A2K5NDH0_A0A2K5NDH0_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_A0A2K6BD18_A0A2K6BD18_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1R5R7_G1R5R7_NOMLE_61853 and tr_A0A2R9AKC5_A0A2R9AKC5_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and tr_G3R265_G3R265_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and tr_H2P6Y6_H2P6Y6_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and tr_H2R8Z5_H2R8Z5_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and sp_Q9H3M0_KCNF1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and tr_F7H076_F7H076_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and tr_A0A0D9S9T6_A0A0D9S9T6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and tr_A0A2K5KW49_A0A2K5KW49_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1SCD5_G1SCD5_NOMLE_61853 and tr_A0A2K6DB08_A0A2K6DB08_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_A0A2J8UF77_A0A2J8UF77_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_A0A2J8PMB3_A0A2J8PMB3_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_F6PWB2_F6PWB2_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_G7PCA8_G7PCA8_MACFA_9541 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_A0A096MPK3_A0A096MPK3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_A0A0D9SB95_A0A0D9SB95_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_A0A2K5KXJ8_A0A2K5KXJ8_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_A0A2K6B157_A0A2K6B157_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QJZ2_G3QJZ2_GORGO_9595 and tr_A0A2K5XFX9_A0A2K5XFX9_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and sp_Q5RC10_KCNV1_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and sp_Q6PIU1_KCNV1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and tr_F6YIN0_F6YIN0_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and tr_G7PCI9_G7PCI9_MACFA_9541 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and tr_A0A096N5E8_A0A096N5E8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and tr_A0A2K5LU17_A0A2K5LU17_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and tr_A0A2K6BAS7_A0A2K6BAS7_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QZG7_G3QZG7_GORGO_9595 and tr_A0A2K5ZTG9_A0A2K5ZTG9_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2J8V4D9_A0A2J8V4D9_PONAB_9601 and tr_A0A2J8NLN6_A0A2J8NLN6_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2J8V4D9_A0A2J8V4D9_PONAB_9601 and tr_A0A2R8Z5X2_A0A2R8Z5X2_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2J8MJF2_A0A2J8MJF2_PANTR_9598 and sp_Q14721_KCNB1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2J8MJF2_A0A2J8MJF2_PANTR_9598 and tr_A0A2R9ADU2_A0A2R9ADU2_PANPA_9597 are exactly identical! WARNING: Sequences sp_A4K2N8_KCNS1_PANTR_9598 and tr_A0A2R9BES1_A0A2R9BES1_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QWA6_H2QWA6_PANTR_9598 and tr_A0A2R9C703_A0A2R9C703_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QWL3_H2QWL3_PANTR_9598 and tr_A0A2R9C7X9_A0A2R9C7X9_PANPA_9597 are exactly identical! WARNING: Sequences sp_A4K2T1_KCNS1_MACMU_9544 and tr_A0A2K6DHP6_A0A2K6DHP6_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HGM9_F7HGM9_MACMU_9544 and tr_G8F573_G8F573_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7HGM9_F7HGM9_MACMU_9544 and tr_A0A096NP34_A0A096NP34_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7HGM9_F7HGM9_MACMU_9544 and tr_A0A0D9S9T2_A0A0D9S9T2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7HGM9_F7HGM9_MACMU_9544 and tr_A0A2K5KZC2_A0A2K5KZC2_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7HGM9_F7HGM9_MACMU_9544 and tr_A0A2K6AT51_A0A2K6AT51_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HGM9_F7HGM9_MACMU_9544 and tr_A0A2K5XQM3_A0A2K5XQM3_MANLE_9568 are exactly identical! WARNING: Sequences tr_F1MXZ4_F1MXZ4_BOVIN_9913 and sp_Q0P583_KCNV1_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G3X8A0_G3X8A0_BOVIN_9913 and sp_Q4ZHA6_KCNB2_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A096MKX7_A0A096MKX7_PAPAN_9555 and tr_A0A2K5KVE4_A0A2K5KVE4_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096MKX7_A0A096MKX7_PAPAN_9555 and tr_A0A2K5ZDL1_A0A2K5ZDL1_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A096P1N4_A0A096P1N4_PAPAN_9555 and tr_A0A2K5MTV6_A0A2K5MTV6_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096P1N4_A0A096P1N4_PAPAN_9555 and tr_A0A2K5YL77_A0A2K5YL77_MANLE_9568 are exactly identical! WARNING: Sequences sp_A4K2M4_KCNS1_PAPAN_9555 and tr_A0A2K5MH63_A0A2K5MH63_CERAT_9531 are exactly identical! WARNING: Sequences sp_A4K2M4_KCNS1_PAPAN_9555 and tr_A0A2K5ZW50_A0A2K5ZW50_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A151MY06_A0A151MY06_ALLMI_8496 and tr_A0A1U7S2G1_A0A1U7S2G1_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091EKC0_A0A091EKC0_CORBR_85066 and tr_A0A091J4K8_A0A091J4K8_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A091EKC0_A0A091EKC0_CORBR_85066 and tr_A0A091VGY4_A0A091VGY4_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091EKC0_A0A091EKC0_CORBR_85066 and tr_A0A087QUR8_A0A087QUR8_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091JNU3_A0A091JNU3_EGRGA_188379 and tr_A0A091V3G1_A0A091V3G1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091JNU3_A0A091JNU3_EGRGA_188379 and tr_A0A0A0B192_A0A0A0B192_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A0V1D0E8_A0A0V1D0E8_TRIBR_45882 and tr_A0A0V0VRT5_A0A0V0VRT5_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1D0E8_A0A0V1D0E8_TRIBR_45882 and tr_A0A0V1NWA0_A0A0V1NWA0_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1D0E8_A0A0V1D0E8_TRIBR_45882 and tr_A0A0V0TNT7_A0A0V0TNT7_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3NNP3_A0A1S3NNP3_SALSA_8030 and tr_A0A060Y170_A0A060Y170_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1U8C538_A0A1U8C538_MESAU_10036 and sp_Q60565_KCNV1_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A226MLK8_A0A226MLK8_CALSU_9009 and tr_A0A226PMU7_A0A226PMU7_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226N3F0_A0A226N3F0_CALSU_9009 and tr_A0A226PHR7_A0A226PHR7_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226N481_A0A226N481_CALSU_9009 and tr_A0A226NPM6_A0A226NPM6_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2U4AJ18_A0A2U4AJ18_TURTR_9739 and tr_A0A2Y9NZG4_A0A2Y9NZG4_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4C1P4_A0A2U4C1P4_TURTR_9739 and tr_A0A2Y9QD31_A0A2Y9QD31_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4C1P4_A0A2U4C1P4_TURTR_9739 and tr_A0A384ADA9_A0A384ADA9_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2U3ZIS8_A0A2U3ZIS8_ODORO_9708 and tr_A0A2U3XFN7_A0A2U3XFN7_LEPWE_9713 are exactly identical! WARNING: Duplicate sequences found: 80 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/4_raxmlng_ancestral/Q14721.raxml.reduced.phy Alignment comprises 1 partitions and 858 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 858 Gaps: 41.19 % Invariant sites: 1.75 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/4_raxmlng_ancestral/Q14721.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/3_mltree/Q14721.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 215 / 17200 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -225744.990135 [00:00:00 -225744.990135] Initial branch length optimization [00:00:02 -180068.389462] Model parameter optimization (eps = 0.100000) [00:02:05] Tree #1, final logLikelihood: -179401.536331 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.147372,0.099443) (0.158476,0.173495) (0.297473,0.564045) (0.396679,1.991693) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/4_raxmlng_ancestral/Q14721.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/4_raxmlng_ancestral/Q14721.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/4_raxmlng_ancestral/Q14721.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14721/4_raxmlng_ancestral/Q14721.raxml.log Analysis started: 04-Jun-2021 13:36:49 / finished: 04-Jun-2021 13:39:02 Elapsed time: 133.189 seconds