RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 02-Jun-2021 22:48:58 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/2_msa/Q14376_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/3_mltree/Q14376.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/4_raxmlng_ancestral/Q14376 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622663338 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/2_msa/Q14376_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 348 sites WARNING: Sequences tr_A0A0E1RYE4_A0A0E1RYE4_COCIM_246410 and tr_A0A0J6Y0S1_A0A0J6Y0S1_COCIT_404692 are exactly identical! WARNING: Sequences tr_B2WGA4_B2WGA4_PYRTR_426418 and tr_A0A2W1EX16_A0A2W1EX16_9PLEO_45151 are exactly identical! WARNING: Sequences tr_D8QXF9_D8QXF9_SELML_88036 and tr_D8SE25_D8SE25_SELML_88036 are exactly identical! WARNING: Sequences tr_G3QNX4_G3QNX4_GORGO_9595 and tr_H2PYB2_H2PYB2_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QNX4_G3QNX4_GORGO_9595 and tr_A0A2R8ZDL9_A0A2R8ZDL9_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q29DV7_Q29DV7_DROPS_46245 and tr_B4H4C0_B4H4C0_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A179V2W2_A0A179V2W2_BLAGS_559298 and tr_C5G6Q8_C5G6Q8_AJEDR_559297 are exactly identical! WARNING: Sequences tr_Q4WV46_Q4WV46_ASPFU_330879 and tr_A0A0S7DVV3_A0A0S7DVV3_9EURO_293939 are exactly identical! WARNING: Sequences tr_J5J6L8_J5J6L8_BEAB2_655819 and tr_A0A0A2VFZ3_A0A0A2VFZ3_BEABA_1245745 are exactly identical! WARNING: Sequences tr_Q2TWQ7_Q2TWQ7_ASPOR_510516 and tr_A0A1S9DEX4_A0A1S9DEX4_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_A0A0E0HJC2_A0A0E0HJC2_ORYNI_4536 and tr_A2Y861_A2Y861_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0HJC2_A0A0E0HJC2_ORYNI_4536 and tr_A0A0E0PS58_A0A0E0PS58_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0HJC2_A0A0E0HJC2_ORYNI_4536 and sp_Q8LNZ3_UGE1_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A0A0E0IB30_A0A0E0IB30_ORYNI_4536 and tr_A2YUN4_A2YUN4_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0IB30_A0A0E0IB30_ORYNI_4536 and tr_I1QI66_I1QI66_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0IB30_A0A0E0IB30_ORYNI_4536 and tr_A0A0E0EL04_A0A0E0EL04_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_A0A0E0IB30_A0A0E0IB30_ORYNI_4536 and tr_A0A0E0QI95_A0A0E0QI95_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0IB30_A0A0E0IB30_ORYNI_4536 and tr_A0A0D3GZM4_A0A0D3GZM4_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0IB30_A0A0E0IB30_ORYNI_4536 and tr_A0A0E0AUU1_A0A0E0AUU1_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0IB30_A0A0E0IB30_ORYNI_4536 and sp_Q6ZDJ7_UGE2_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A0A0K0J7J5_A0A0K0J7J5_BRUMA_6279 and tr_A0A0R3Q4X5_A0A0R3Q4X5_9BILA_42155 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_G7XUS1_G7XUS1_ASPKW_1033177 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_G3XN08_G3XN08_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_A0A100IKY6_A0A100IKY6_ASPNG_5061 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_A0A146F0L4_A0A146F0L4_9EURO_1069201 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_A0A1L9NK53_A0A1L9NK53_ASPTU_767770 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_A0A1L9UZN8_A0A1L9UZN8_9EURO_767769 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_A0A317VTH5_A0A317VTH5_9EURO_1448314 are exactly identical! WARNING: Sequences tr_A2R3C7_A2R3C7_ASPNC_425011 and tr_A0A319AEQ4_A0A319AEQ4_9EURO_1450533 are exactly identical! WARNING: Sequences tr_E5SKP0_E5SKP0_TRISP_6334 and tr_A0A0V1DDI7_A0A0V1DDI7_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5SKP0_E5SKP0_TRISP_6334 and tr_A0A0V0VS56_A0A0V0VS56_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5SKP0_E5SKP0_TRISP_6334 and tr_A0A0V1PMC8_A0A0V1PMC8_9BILA_92180 are exactly identical! WARNING: Sequences tr_E5SKP0_E5SKP0_TRISP_6334 and tr_A0A0V0U680_A0A0V0U680_9BILA_144512 are exactly identical! WARNING: Sequences tr_B8BDM3_B8BDM3_ORYSI_39946 and sp_Q652A8_UGE3_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_B8BEF8_B8BEF8_ORYSI_39946 and tr_I1QMW4_I1QMW4_ORYGL_4538 are exactly identical! WARNING: Sequences tr_B8BEF8_B8BEF8_ORYSI_39946 and tr_A0A0E0EQS1_A0A0E0EQS1_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_B8BEF8_B8BEF8_ORYSI_39946 and tr_A0A0E0QPQ6_A0A0E0QPQ6_ORYRU_4529 are exactly identical! WARNING: Sequences tr_B8BEF8_B8BEF8_ORYSI_39946 and sp_Q6K2E1_UGE4_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_I1PYK0_I1PYK0_ORYGL_4538 and tr_A0A0D3GBN1_A0A0D3GBN1_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_F2SQY7_F2SQY7_TRIRC_559305 and tr_A0A178EZH9_A0A178EZH9_TRIRU_5551 are exactly identical! WARNING: Sequences tr_B3S253_B3S253_TRIAD_10228 and tr_A0A369SGY7_A0A369SGY7_9METZ_287889 are exactly identical! WARNING: Sequences tr_A0A0D2XYW6_A0A0D2XYW6_FUSO4_426428 and tr_X0CVS0_X0CVS0_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_A0A0D2XYW6_A0A0D2XYW6_FUSO4_426428 and tr_A0A2H3GV26_A0A2H3GV26_FUSOX_327505 are exactly identical! WARNING: Sequences tr_F2PK30_F2PK30_TRIEC_559882 and tr_A0A059JCK8_A0A059JCK8_9EURO_1215338 are exactly identical! WARNING: Sequences tr_M4EG19_M4EG19_BRARP_51351 and tr_A0A078ID75_A0A078ID75_BRANA_3708 are exactly identical! WARNING: Sequences tr_S2JKB1_S2JKB1_MUCC1_1220926 and tr_A0A0C9N3V7_A0A0C9N3V7_9FUNG_91626 are exactly identical! WARNING: Sequences tr_A0A3B6KHK5_A0A3B6KHK5_WHEAT_4565 and tr_A0A3B6LLH4_A0A3B6LLH4_WHEAT_4565 are exactly identical! WARNING: Sequences tr_A0A3B6KHK5_A0A3B6KHK5_WHEAT_4565 and tr_A0A3B6MS11_A0A3B6MS11_WHEAT_4565 are exactly identical! WARNING: Sequences tr_A0A084QLP8_A0A084QLP8_STAC4_1283841 and tr_A0A084RRB7_A0A084RRB7_STACH_1283842 are exactly identical! WARNING: Sequences tr_A0A078F9C5_A0A078F9C5_BRANA_3708 and tr_A0A0D3E497_A0A0D3E497_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A078HSN7_A0A078HSN7_BRANA_3708 and tr_A0A0D3E936_A0A0D3E936_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A078IBY2_A0A078IBY2_BRANA_3708 and tr_A0A078IJE5_A0A078IJE5_BRANA_3708 are exactly identical! WARNING: Sequences tr_A0A078IBY2_A0A078IBY2_BRANA_3708 and tr_A0A0D3E3U5_A0A0D3E3U5_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A078J6S7_A0A078J6S7_BRANA_3708 and tr_A0A0D3C9K1_A0A0D3C9K1_BRAOL_109376 are exactly identical! WARNING: Sequences tr_V4SBE3_V4SBE3_9ROSI_85681 and tr_A0A2H5QBP9_A0A2H5QBP9_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A0D2QIF8_A0A0D2QIF8_GOSRA_29730 and tr_A0A1U8JAZ0_A0A1U8JAZ0_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0A1N3A0_A0A0A1N3A0_9FUNG_58291 and tr_A0A2G4SYC9_A0A2G4SYC9_9FUNG_1340429 are exactly identical! WARNING: Sequences tr_A0A0A1N3A0_A0A0A1N3A0_9FUNG_58291 and tr_A0A367JIU7_A0A367JIU7_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A1S3Z206_A0A1S3Z206_TOBAC_4097 and tr_A0A1U7W998_A0A1U7W998_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4BCP5_A0A1S4BCP5_TOBAC_4097 and tr_A0A1U7XE04_A0A1U7XE04_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1I7TXG1_A0A1I7TXG1_9PELO_1561998 and tr_A0A1I7TXG2_A0A1I7TXG2_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A0A1U8G7H2_A0A1U8G7H2_CAPAN_4072 and tr_A0A2G3DB92_A0A2G3DB92_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A319BUI2_A0A319BUI2_9EURO_1448315 and tr_A0A2V5IKQ5_A0A2V5IKQ5_9EURO_1450541 are exactly identical! WARNING: Duplicate sequences found: 63 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/4_raxmlng_ancestral/Q14376.raxml.reduced.phy Alignment comprises 1 partitions and 348 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 348 Gaps: 3.19 % Invariant sites: 2.59 % NOTE: Binary MSA file already exists: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/4_raxmlng_ancestral/Q14376.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/3_mltree/Q14376.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 87 / 6960 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -134334.507144 [00:00:00 -134334.507144] Initial branch length optimization [00:00:00 -134221.410943] Model parameter optimization (eps = 0.100000) [00:00:26] Tree #1, final logLikelihood: -133931.770251 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.217688,0.327246) (0.345415,0.412790) (0.241424,1.125657) (0.195473,2.631657) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/4_raxmlng_ancestral/Q14376.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/4_raxmlng_ancestral/Q14376.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/4_raxmlng_ancestral/Q14376.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/Q14376/4_raxmlng_ancestral/Q14376.raxml.log Analysis started: 02-Jun-2021 22:48:58 / finished: 02-Jun-2021 22:49:28 Elapsed time: 29.415 seconds