RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 17:25:23 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/2_msa/Q13422_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/3_mltree/Q13422.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/4_raxmlng_ancestral/Q13422 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626099923 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/2_msa/Q13422_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 519 sites WARNING: Sequences tr_M3XPF8_M3XPF8_MUSPF_9669 and tr_A0A2Y9KXL4_A0A2Y9KXL4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2I3FZF9_A0A2I3FZF9_NOMLE_61853 and tr_G3R6P8_G3R6P8_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A2I3FZF9_A0A2I3FZF9_NOMLE_61853 and tr_A0A0D9RAL2_A0A0D9RAL2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I3HWF0_A0A2I3HWF0_NOMLE_61853 and tr_D2I506_D2I506_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A2I3HWF0_A0A2I3HWF0_NOMLE_61853 and tr_A0A2U3XZL8_A0A2U3XZL8_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G1QDM6_G1QDM6_MYOLU_59463 and tr_A0A287A3P0_A0A287A3P0_PIG_9823 are exactly identical! WARNING: Sequences tr_G1QDM6_G1QDM6_MYOLU_59463 and tr_F1N670_F1N670_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A2I2Y4B6_A0A2I2Y4B6_GORGO_9595 and sp_A2T736_ZKSC8_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2Y4B6_A0A2I2Y4B6_GORGO_9595 and sp_A1YG60_ZKSC8_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3R7D9_G3R7D9_GORGO_9595 and tr_A0A2J8Q1G0_A0A2J8Q1G0_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R7D9_G3R7D9_GORGO_9595 and sp_Q9H2S9_IKZF4_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3R7D9_G3R7D9_GORGO_9595 and tr_A0A2R9CIJ3_A0A2R9CIJ3_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and tr_H2QUK7_H2QUK7_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and sp_Q13422_IKZF1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and tr_F6YC72_F6YC72_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and tr_A0A096NWV9_A0A096NWV9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and tr_A0A0D9RTY8_A0A0D9RTY8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and tr_A0A2K5NH61_A0A2K5NH61_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and tr_A0A2K6C676_A0A2K6C676_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3RPP3_G3RPP3_GORGO_9595 and tr_A0A2K5ZPN0_A0A2K5ZPN0_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3RTC3_G3RTC3_GORGO_9595 and tr_A0A2I3TFL6_A0A2I3TFL6_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RTC3_G3RTC3_GORGO_9595 and sp_Q96GC6_ZN274_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RTC3_G3RTC3_GORGO_9595 and tr_A0A2R9AMB7_A0A2R9AMB7_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2J8U2Z8_A0A2J8U2Z8_PONAB_9601 and sp_Q5REN4_ZN248_PONAB_9601 are exactly identical! WARNING: Sequences tr_H2P8H4_H2P8H4_PONAB_9601 and tr_K7AFV7_K7AFV7_PANTR_9598 are exactly identical! WARNING: Sequences tr_H2P8H4_H2P8H4_PONAB_9601 and tr_F7B8A3_F7B8A3_MACMU_9544 are exactly identical! WARNING: Sequences tr_H2P8H4_H2P8H4_PONAB_9601 and tr_A0A096MW48_A0A096MW48_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H2P8H4_H2P8H4_PONAB_9601 and tr_A0A2K5LBV8_A0A2K5LBV8_CERAT_9531 are exactly identical! WARNING: Sequences tr_H2P8H4_H2P8H4_PONAB_9601 and tr_A0A2K6BT04_A0A2K6BT04_MACNE_9545 are exactly identical! WARNING: Sequences tr_H2P8H4_H2P8H4_PONAB_9601 and tr_A0A2K5YC92_A0A2K5YC92_MANLE_9568 are exactly identical! WARNING: Sequences tr_H2P8H4_H2P8H4_PONAB_9601 and tr_A0A2R9C8Y7_A0A2R9C8Y7_PANPA_9597 are exactly identical! WARNING: Sequences tr_J9NTQ0_J9NTQ0_CANLF_9615 and tr_M3WSR9_M3WSR9_FELCA_9685 are exactly identical! WARNING: Sequences tr_J9NTQ0_J9NTQ0_CANLF_9615 and tr_A0A2U3W197_A0A2U3W197_ODORO_9708 are exactly identical! WARNING: Sequences tr_J9NTQ0_J9NTQ0_CANLF_9615 and tr_A0A2U3XBG7_A0A2U3XBG7_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A2I3SJP3_A0A2I3SJP3_PANTR_9598 and tr_H2QUL5_H2QUL5_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I3SJP3_A0A2I3SJP3_PANTR_9598 and tr_A0A2R8ZYY6_A0A2R8ZYY6_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I3TIE9_A0A2I3TIE9_PANTR_9598 and sp_Q86XU0_ZN677_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I3TIE9_A0A2I3TIE9_PANTR_9598 and tr_A0A2R9CGM5_A0A2R9CGM5_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QBZ7_H2QBZ7_PANTR_9598 and tr_A0A2R9BW24_A0A2R9BW24_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QP57_H2QP57_PANTR_9598 and sp_Q6ZSB9_ZBT49_HUMAN_9606 are exactly identical! WARNING: Sequences tr_W5Q9D1_W5Q9D1_SHEEP_9940 and tr_F1S1S4_F1S1S4_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A158NPF2_A0A158NPF2_ATTCE_12957 and tr_A0A195B9A9_A0A195B9A9_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NPF2_A0A158NPF2_ATTCE_12957 and tr_A0A195ETV9_A0A195ETV9_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A1D5QG38_A0A1D5QG38_MACMU_9544 and tr_G7PYQ6_G7PYQ6_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5QTF3_A0A1D5QTF3_MACMU_9544 and tr_G7P1R1_G7P1R1_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5QTF3_A0A1D5QTF3_MACMU_9544 and tr_A0A0D9RU92_A0A0D9RU92_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A1D5QTF3_A0A1D5QTF3_MACMU_9544 and tr_A0A2K5M1I9_A0A2K5M1I9_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5QTF3_A0A1D5QTF3_MACMU_9544 and tr_A0A2K6C4T3_A0A2K6C4T3_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5RD30_A0A1D5RD30_MACMU_9544 and tr_G8F4A0_G8F4A0_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5RD30_A0A1D5RD30_MACMU_9544 and tr_A0A096P470_A0A096P470_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A1D5RD30_A0A1D5RD30_MACMU_9544 and tr_A0A2K5KU41_A0A2K5KU41_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5RD30_A0A1D5RD30_MACMU_9544 and tr_A0A2K6C701_A0A2K6C701_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6SLB4_F6SLB4_MACMU_9544 and tr_G7PTA6_G7PTA6_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_G7P3S3_G7P3S3_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A096NLJ7_A0A096NLJ7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A2K5M129_A0A2K5M129_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A2K6DJK3_A0A2K6DJK3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7EH74_F7EH74_MACMU_9544 and tr_A0A2K6A186_A0A2K6A186_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7HGH1_F7HGH1_MACMU_9544 and tr_A0A0D9S376_A0A0D9S376_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7HGH1_F7HGH1_MACMU_9544 and tr_A0A2K5LW35_A0A2K5LW35_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7HGH1_F7HGH1_MACMU_9544 and tr_A0A2K5YZH0_A0A2K5YZH0_MANLE_9568 are exactly identical! WARNING: Sequences tr_G7N7B0_G7N7B0_MACMU_9544 and tr_G7PIG3_G7PIG3_MACFA_9541 are exactly identical! WARNING: Sequences tr_G7N7B0_G7N7B0_MACMU_9544 and tr_A0A0D9QYY9_A0A0D9QYY9_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G7N7B0_G7N7B0_MACMU_9544 and tr_A0A2K5LTX4_A0A2K5LTX4_CERAT_9531 are exactly identical! WARNING: Sequences tr_G7N7B0_G7N7B0_MACMU_9544 and tr_A0A2K6AQT5_A0A2K6AQT5_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7N7B0_G7N7B0_MACMU_9544 and tr_A0A2K5YE94_A0A2K5YE94_MANLE_9568 are exactly identical! WARNING: Sequences tr_H0YXE2_H0YXE2_TAEGU_59729 and tr_A0A218UI62_A0A218UI62_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A0D9S5F3_A0A0D9S5F3_CHLSB_60711 and tr_A0A2K5KTC8_A0A2K5KTC8_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1S3WK44_A0A1S3WK44_ERIEU_9365 and tr_A0A1S3WKE3_A0A1S3WKE3_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A0A2U3V7A3_A0A2U3V7A3_TURTR_9739 and tr_A0A2U4A8G4_A0A2U4A8G4_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A2U4BN70_A0A2U4BN70_TURTR_9739 and tr_A0A2Y9MW95_A0A2Y9MW95_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4BN70_A0A2U4BN70_TURTR_9739 and tr_A0A384AKR0_A0A384AKR0_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 72 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/4_raxmlng_ancestral/Q13422.raxml.reduced.phy Alignment comprises 1 partitions and 519 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 519 Gaps: 36.49 % Invariant sites: 0.19 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/4_raxmlng_ancestral/Q13422.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/3_mltree/Q13422.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 130 / 10400 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -166696.179037 [00:00:00 -166696.179037] Initial branch length optimization [00:00:01 -164797.882348] Model parameter optimization (eps = 0.100000) [00:00:47] Tree #1, final logLikelihood: -164058.946738 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.087313,0.238991) (0.095106,0.764520) (0.351653,0.729239) (0.465928,1.395030) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/4_raxmlng_ancestral/Q13422.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/4_raxmlng_ancestral/Q13422.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/4_raxmlng_ancestral/Q13422.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q13422/4_raxmlng_ancestral/Q13422.raxml.log Analysis started: 12-Jul-2021 17:25:23 / finished: 12-Jul-2021 17:26:16 Elapsed time: 52.727 seconds Consumed energy: 4.383 Wh