RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 07-Jul-2021 01:39:40 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/2_msa/Q06413_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/3_mltree/Q06413 --seed 2 --threads 2 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (2 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/2_msa/Q06413_trimmed_msa.fasta [00:00:00] Loaded alignment with 989 taxa and 83 sites WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and sp_P40791_MEF2_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_B4J5M9_B4J5M9_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_B4HMA3_B4HMA3_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_A0A0R3NTW6_A0A0R3NTW6_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_B4MRI7_B4MRI7_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_B3MF35_B3MF35_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_B4GIF6_B4GIF6_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_B4LP45_B4LP45_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_B4KLR1_B4KLR1_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_A0A0M4ETH6_A0A0M4ETH6_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4QHU0_B4QHU0_DROSI_7240 and tr_A0A1W4V0M3_A0A1W4V0M3_DROFC_30025 are exactly identical! WARNING: Sequences tr_E2AVU7_E2AVU7_CAMFO_104421 and tr_E2B9H5_E2B9H5_HARSA_610380 are exactly identical! WARNING: Sequences tr_E2AVU7_E2AVU7_CAMFO_104421 and tr_A0A154PL87_A0A154PL87_9HYME_178035 are exactly identical! WARNING: Sequences tr_E2AVU7_E2AVU7_CAMFO_104421 and tr_A0A2P8ZDN1_A0A2P8ZDN1_BLAGE_6973 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1D5PGR7_A0A1D5PGR7_CHICK_9031 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and sp_Q8CFN5_MEF2C_MOUSE_10090 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_M3Y999_M3Y999_MUSPF_9669 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A3B3IE71_A0A3B3IE71_ORYLA_8090 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2I3GSV9_A0A2I3GSV9_NOMLE_61853 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_G3HAW1_G3HAW1_CRIGR_10029 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2I2Y8L6_A0A2I2Y8L6_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2J8UX19_A0A2J8UX19_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and sp_Q5R444_MEF2C_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_F1PAY8_F1PAY8_CANLF_9615 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2I3TMM0_A0A2I3TMM0_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_F7FK48_F7FK48_ORNAN_9258 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_F7FXI4_F7FXI4_MONDO_13616 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_F6RMR8_F6RMR8_HORSE_9796 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and sp_A0A096MJY4_MEF2C_RAT_10116 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A3B5QCA4_A0A3B5QCA4_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_I3KG34_I3KG34_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A287DB87_A0A287DB87_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_H2RPN6_H2RPN6_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A286XA65_A0A286XA65_CAVPO_10141 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and sp_Q06413_MEF2C_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1D5RIU2_A0A1D5RIU2_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_G5BQZ1_G5BQZ1_HETGA_10181 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_K7G0E8_K7G0E8_PELSI_13735 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_H3DDB7_H3DDB7_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_H0YQY4_H0YQY4_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_U3EHP9_U3EHP9_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A287ALL3_A0A287ALL3_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_G1M3S0_G1M3S0_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_G7P7X2_G7P7X2_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_G3MW05_G3MW05_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and sp_Q2KIA0_MEF2C_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2I2U1F3_A0A2I2U1F3_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_U3K6P0_U3K6P0_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_U3IUM9_U3IUM9_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A3B1IZV7_A0A3B1IZV7_ASTMX_7994 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_W5M184_W5M184_LEPOC_7918 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A096ME88_A0A096ME88_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2I3NEM1_A0A2I3NEM1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2I0LZE4_A0A2I0LZE4_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A093I4C5_A0A093I4C5_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1S2ZGH7_A0A1S2ZGH7_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1S3F5K1_A0A1S3F5K1_DIPOR_10020 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1S3NM89_A0A1S3NM89_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1S3PJM7_A0A1S3PJM7_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1L8HR85_A0A1L8HR85_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1L8I1W6_A0A1L8I1W6_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A3Q0ELI2_A0A3Q0ELI2_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1U7RPZ7_A0A1U7RPZ7_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A1U8D254_A0A1U8D254_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2I4B7Z3_A0A2I4B7Z3_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A218V692_A0A218V692_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2D0PRG4_A0A2D0PRG4_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2K5NHU5_A0A2K5NHU5_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2K6CP52_A0A2K6CP52_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2K5Z352_A0A2K5Z352_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2U4AWF1_A0A2U4AWF1_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2U3W5I5_A0A2U3W5I5_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2U3YMD2_A0A2U3YMD2_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2U9BSN9_A0A2U9BSN9_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2Y9QX61_A0A2Y9QX61_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2Y9JM62_A0A2Y9JM62_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2Y9PPS1_A0A2Y9PPS1_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A2Y9EGD3_A0A2Y9EGD3_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A384CW75_A0A384CW75_URSMA_29073 are exactly identical! WARNING: Sequences tr_A0A0R4ITE5_A0A0R4ITE5_DANRE_7955 and tr_A0A384B0J5_A0A384B0J5_BALAS_310752 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1D5NYL4_A0A1D5NYL4_CHICK_9031 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and sp_Q63943_MEF2D_MOUSE_10090 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_M3XYQ0_M3XYQ0_MUSPF_9669 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A3B3HJS7_A0A3B3HJS7_ORYLA_8090 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2I3H0G6_A0A2I3H0G6_NOMLE_61853 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G1PP07_G1PP07_MYOLU_59463 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G3HG80_G3HG80_CRIGR_10029 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G3SH47_G3SH47_GORGO_9595 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_H2N5D1_H2N5D1_PONAB_9601 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G1T2R8_G1T2R8_RABIT_9986 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_F1PDZ9_F1PDZ9_CANLF_9615 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2I3SAX9_A0A2I3SAX9_PANTR_9598 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_F7AJL0_F7AJL0_MONDO_13616 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_F6VSV5_F6VSV5_HORSE_9796 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_W5P7J5_W5P7J5_SHEEP_9940 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and sp_O89038_MEF2D_RAT_10116 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A3B5PQ75_A0A3B5PQ75_XIPMA_8083 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A287DC54_A0A287DC54_ICTTR_43179 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_H0X4D2_H0X4D2_OTOGA_30611 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_H0V682_H0V682_CAVPO_10141 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and sp_Q14814_MEF2D_HUMAN_9606 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_F6VKY1_F6VKY1_MACMU_9544 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G5AR89_G5AR89_HETGA_10181 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_K7FTW9_K7FTW9_PELSI_13735 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G3TFE5_G3TFE5_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G3WQ68_G3WQ68_SARHA_9305 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_H0YZ64_H0YZ64_TAEGU_59729 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_U3D4G6_U3D4G6_CALJA_9483 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A287AG61_A0A287AG61_PIG_9823 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_H3AGH7_H3AGH7_LATCH_7897 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G1M7X9_G1M7X9_AILME_9646 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_G7NV90_G7NV90_MACFA_9541 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_F1CYZ1_F1CYZ1_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_L5JUL6_L5JUL6_PTEAL_9402 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A337SSU1_A0A337SSU1_FELCA_9685 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_U3KGP2_U3KGP2_FICAL_59894 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_U3II61_U3II61_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A3B1K759_A0A3B1K759_ASTMX_7994 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A087YK57_A0A087YK57_POEFO_48698 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A096MQL4_A0A096MQL4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A091CYJ8_A0A091CYJ8_FUKDA_885580 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A0D9S4V5_A0A0D9S4V5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A151NYT0_A0A151NYT0_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A099ZG58_A0A099ZG58_TINGU_94827 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1S3AIK0_A0A1S3AIK0_ERIEU_9365 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1S3GB89_A0A1S3GB89_DIPOR_10020 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1S3M1J4_A0A1S3M1J4_SALSA_8030 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1S3PY40_A0A1S3PY40_SALSA_8030 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1L8FCC1_A0A1L8FCC1_XENLA_8355 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_B7ZQS1_B7ZQS1_XENLA_8355 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A3Q0DJR8_A0A3Q0DJR8_TARSY_1868482 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1U7SBF2_A0A1U7SBF2_ALLSI_38654 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A1U8C9D6_A0A1U8C9D6_MESAU_10036 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A060VWI7_A0A060VWI7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A060X5R0_A0A060X5R0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A218UNU7_A0A218UNU7_9PASE_299123 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A226MGG3_A0A226MGG3_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A226NR03_A0A226NR03_COLVI_9014 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0RCE9_A0A2D0RCE9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0RCH8_A0A2D0RCH8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0RDI5_A0A2D0RDI5_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0RDL8_A0A2D0RDL8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0RDP2_A0A2D0RDP2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0RE88_A0A2D0RE88_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0RE98_A0A2D0RE98_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2D0REC2_A0A2D0REC2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2K5NZJ7_A0A2K5NZJ7_CERAT_9531 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2K6BFU7_A0A2K6BFU7_MACNE_9545 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2K6AE23_A0A2K6AE23_MANLE_9568 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2R9BY21_A0A2R9BY21_PANPA_9597 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2U3W4I2_A0A2U3W4I2_ODORO_9708 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2U3XZB3_A0A2U3XZB3_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2U9CJ02_A0A2U9CJ02_SCOMX_52904 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2Y9E8T5_A0A2Y9E8T5_TRIMA_127582 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2Y9IKB8_A0A2Y9IKB8_ENHLU_391180 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2Y9LZU5_A0A2Y9LZU5_DELLE_9749 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A2Y9EX36_A0A2Y9EX36_PHYCD_9755 are exactly identical! WARNING: Sequences tr_F1Q910_F1Q910_DANRE_7955 and tr_A0A383Z9R8_A0A383Z9R8_BALAS_310752 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_A0A3B5Q5A0_A0A3B5Q5A0_XIPMA_8083 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_I3J2J6_I3J2J6_ORENI_8128 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_H2VB70_H2VB70_TAKRU_31033 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_G3PI86_G3PI86_GASAC_69293 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_A0A3B1IZ80_A0A3B1IZ80_ASTMX_7994 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_A0A087X7W5_A0A087X7W5_POEFO_48698 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_A0A1S3T590_A0A1S3T590_SALSA_8030 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_A0A060Y2J1_A0A060Y2J1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_J7HE56_J7HE56_DANRE_7955 and tr_A0A2U9C3G9_A0A2U9C3G9_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1D5PBY4_A0A1D5PBY4_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and sp_Q9W6U8_MEF2A_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and sp_Q60929_MEF2A_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A3B3HJW7_A0A3B3HJW7_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2I3FW04_A0A2I3FW04_NOMLE_61853 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_G1PUK8_G1PUK8_MYOLU_59463 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_G3H592_G3H592_CRIGR_10029 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_G3SD93_G3SD93_GORGO_9595 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2J8VXV8_A0A2J8VXV8_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and sp_Q5REW7_MEF2A_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_G1NAN9_G1NAN9_MELGA_9103 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_H9GFV1_H9GFV1_ANOCA_28377 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_F6XZU9_F6XZU9_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2I3S0F9_A0A2I3S0F9_PANTR_9598 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_F6VD47_F6VD47_ORNAN_9258 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_F6THZ2_F6THZ2_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_F6ZQ70_F6ZQ70_HORSE_9796 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_W5PJH2_W5PJH2_SHEEP_9940 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and sp_Q2MJT0_MEF2A_RAT_10116 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A3B5PRQ5_A0A3B5PRQ5_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_I3KD40_I3KD40_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A287CUU1_A0A287CUU1_ICTTR_43179 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_H0WZ38_H0WZ38_OTOGA_30611 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A3B5KM28_A0A3B5KM28_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A286Y288_A0A286Y288_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and sp_Q02078_MEF2A_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1D5R1Y7_A0A1D5R1Y7_MACMU_9544 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_K7G986_K7G986_PELSI_13735 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_H3DPI1_H3DPI1_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_G3PIN7_G3PIN7_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_G3SUN6_G3SUN6_LOXAF_9785 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_G3WX77_G3WX77_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_H0ZEK2_H0ZEK2_TAEGU_59729 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2R8MKC4_A0A2R8MKC4_CALJA_9483 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_I3LQ39_I3LQ39_PIG_9823 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_H2ZVU5_H2ZVU5_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and sp_A2VDZ3_MEF2A_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_M3X8U4_M3X8U4_FELCA_9685 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_U3K6U1_U3K6U1_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_U3IIF1_U3IIF1_ANAPL_8839 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A3B1JUB9_A0A3B1JUB9_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_W5NAT5_W5NAT5_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A087YMR0_A0A087YMR0_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A096NNE1_A0A096NNE1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A0D9RWI6_A0A0D9RWI6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A0N8K363_A0A0N8K363_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A0Q3URS6_A0A0Q3URS6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A091EV31_A0A091EV31_CORBR_85066 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A091IZA9_A0A091IZA9_EGRGA_188379 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A091VHI3_A0A091VHI3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A093HSE2_A0A093HSE2_STRCA_441894 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A099ZCU1_A0A099ZCU1_TINGU_94827 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A091GA78_A0A091GA78_9AVES_55661 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2I0MD52_A0A2I0MD52_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A091HVT3_A0A091HVT3_CALAN_9244 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1S3WJJ2_A0A1S3WJJ2_ERIEU_9365 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1S3ET28_A0A1S3ET28_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1S3KLH7_A0A1S3KLH7_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1S3MMX1_A0A1S3MMX1_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1L8H120_A0A1L8H120_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1U7TQ45_A0A1U7TQ45_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A3Q0G6N0_A0A3Q0G6N0_ALLSI_38654 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1U8CHJ2_A0A1U8CHJ2_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A3Q0CHX1_A0A3Q0CHX1_MESAU_10036 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A1V4JDZ1_A0A1V4JDZ1_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A060VT04_A0A060VT04_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A060WSJ1_A0A060WSJ1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A218V0F5_A0A218V0F5_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2D0QSJ9_A0A2D0QSJ9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2D0QSN6_A0A2D0QSN6_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2D0QSP1_A0A2D0QSP1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2K5KTE9_A0A2K5KTE9_CERAT_9531 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2K6BKN0_A0A2K6BKN0_MACNE_9545 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2K6A0V2_A0A2K6A0V2_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2R9B3G6_A0A2R9B3G6_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2U4C774_A0A2U4C774_TURTR_9739 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2U3WB23_A0A2U3WB23_ODORO_9708 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2U3YQ65_A0A2U3YQ65_LEPWE_9713 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2U9BW48_A0A2U9BW48_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2Y9DDP9_A0A2Y9DDP9_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2Y9K009_A0A2Y9K009_ENHLU_391180 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2Y9QAK1_A0A2Y9QAK1_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A2Y9RVY3_A0A2Y9RVY3_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A384BTG0_A0A384BTG0_URSMA_29073 are exactly identical! WARNING: Sequences tr_Q1LXH4_Q1LXH4_DANRE_7955 and tr_A0A384AV86_A0A384AV86_BALAS_310752 are exactly identical! WARNING: Sequences tr_Q6PCS3_Q6PCS3_DANRE_7955 and tr_A0A3B1IKT0_A0A3B1IKT0_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q6PCS3_Q6PCS3_DANRE_7955 and tr_A0A1S3KZQ6_A0A1S3KZQ6_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q6PCS3_Q6PCS3_DANRE_7955 and tr_A0A1S3LTA7_A0A1S3LTA7_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_G1MYT4_G1MYT4_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_U3KCU1_U3KCU1_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_A0A151NTI8_A0A151NTI8_ALLMI_8496 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_A0A091W7Y6_A0A091W7Y6_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_A0A2I0LPW9_A0A2I0LPW9_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_A0A1U7RTA9_A0A1U7RTA9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_A0A226MH10_A0A226MH10_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5P1A2_A0A1D5P1A2_CHICK_9031 and tr_A0A226NQY6_A0A226NQY6_COLVI_9014 are exactly identical! WARNING: Sequences sp_O55087_MEF2B_MOUSE_10090 and tr_G3H475_G3H475_CRIGR_10029 are exactly identical! WARNING: Sequences sp_O55087_MEF2B_MOUSE_10090 and tr_Q6AXR7_Q6AXR7_RAT_10116 are exactly identical! WARNING: Sequences sp_O55087_MEF2B_MOUSE_10090 and tr_A0A3Q0CEX5_A0A3Q0CEX5_MESAU_10036 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_B0VZE2_B0VZE2_CULQU_7176 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_K7ISC4_K7ISC4_NASVI_7425 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_A0A087ZQU1_A0A087ZQU1_APIME_7460 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_Q5TX24_Q5TX24_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_D6W7M3_D6W7M3_TRICA_7070 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_J9KBY2_J9KBY2_ACYPI_7029 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_E0VQ52_E0VQ52_PEDHC_121224 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_A0A084VWY8_A0A084VWY8_ANOSI_74873 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_A0A0L0BU03_A0A0L0BU03_LUCCU_7375 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_A0A1D2NHJ7_A0A1D2NHJ7_ORCCI_48709 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_A0A1W4WPY5_A0A1W4WPY5_AGRPL_224129 are exactly identical! WARNING: Sequences tr_W5JRG2_W5JRG2_ANODA_43151 and tr_A0A2A3EK79_A0A2A3EK79_APICC_94128 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_G1NZU3_G1NZU3_MYOLU_59463 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_G3SEK6_G3SEK6_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_H2NY53_H2NY53_PONAB_9601 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_E2RB46_E2RB46_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_H2QFU7_H2QFU7_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_F6VEY3_F6VEY3_MONDO_13616 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_F7BRX5_F7BRX5_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A287CV01_A0A287CV01_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and sp_Q02080_MEF2B_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_F7H1J8_F7H1J8_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_G3UL76_G3UL76_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_G3WH90_G3WH90_SARHA_9305 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_F6QVZ3_F6QVZ3_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A287AN34_A0A287AN34_PIG_9823 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_G1LYY4_G1LYY4_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_L5L6E8_L5L6E8_PTEAL_9402 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_M3WC35_M3WC35_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2I3MFP6_A0A2I3MFP6_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A0D9QYU6_A0A0D9QYU6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2K5LMS4_A0A2K5LMS4_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2K6DJ63_A0A2K6DJ63_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2K5XC22_A0A2K5XC22_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2R9A8C6_A0A2R9A8C6_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2U4AL45_A0A2U4AL45_TURTR_9739 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2U3W8Y0_A0A2U3W8Y0_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2U3YLP5_A0A2U3YLP5_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2Y9E135_A0A2Y9E135_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2Y9J1B0_A0A2Y9J1B0_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A2Y9TKV5_A0A2Y9TKV5_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A384D504_A0A384D504_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YVK2_M3YVK2_MUSPF_9669 and tr_A0A384B888_A0A384B888_BALAS_310752 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_K9GB39_K9GB39_PEND2_1170229 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A0A2L857_A0A0A2L857_PENIT_40296 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A0A2IYI8_A0A0A2IYI8_PENEN_27334 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A0M9WHG0_A0A0M9WHG0_9EURO_229535 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A0G4P2P6_A0A0G4P2P6_PENCA_1429867 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A117NP47_A0A117NP47_9EURO_48697 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A135LAV1_A0A135LAV1_PENPA_5078 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A1F5LMC2_A0A1F5LMC2_9EURO_1835702 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A1V6NXF9_A0A1V6NXF9_9EURO_60169 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A1V6R621_A0A1V6R621_9EURO_60172 are exactly identical! WARNING: Sequences tr_B6HFQ8_B6HFQ8_PENRW_500485 and tr_A0A1V6YUE7_A0A1V6YUE7_PENNA_60175 are exactly identical! WARNING: Sequences tr_A0A3B3H6V1_A0A3B3H6V1_ORYLA_8090 and tr_A0A3B5RFJ6_A0A3B5RFJ6_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A3B3H6V1_A0A3B3H6V1_ORYLA_8090 and tr_I3KUT6_I3KUT6_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B3H6V1_A0A3B3H6V1_ORYLA_8090 and tr_H2UE51_H2UE51_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A3B3H6V1_A0A3B3H6V1_ORYLA_8090 and tr_H3DJH5_H3DJH5_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A3B3H6V1_A0A3B3H6V1_ORYLA_8090 and tr_G3NJP7_G3NJP7_GASAC_69293 are exactly identical! WARNING: Sequences tr_A0A3B3H6V1_A0A3B3H6V1_ORYLA_8090 and tr_A0A087XQA9_A0A087XQA9_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B3H6V1_A0A3B3H6V1_ORYLA_8090 and tr_A0A2I4BAE7_A0A2I4BAE7_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B3HFV7_A0A3B3HFV7_ORYLA_8090 and tr_A0A3B5PX45_A0A3B5PX45_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A3B3HFV7_A0A3B3HFV7_ORYLA_8090 and tr_I3JZM6_I3JZM6_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B3HFV7_A0A3B3HFV7_ORYLA_8090 and tr_A0A3B5JY89_A0A3B5JY89_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A3B3HFV7_A0A3B3HFV7_ORYLA_8090 and tr_A0A087YGS4_A0A087YGS4_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B3HFV7_A0A3B3HFV7_ORYLA_8090 and tr_A0A2U9BA48_A0A2U9BA48_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2MJC1_H2MJC1_ORYLA_8090 and tr_I3J4R3_I3J4R3_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2MJC1_H2MJC1_ORYLA_8090 and tr_H2T5V9_H2T5V9_TAKRU_31033 are exactly identical! WARNING: Sequences tr_E3S153_E3S153_PYRTT_861557 and tr_W6ZIV5_W6ZIV5_COCMI_930090 are exactly identical! WARNING: Sequences tr_E3S153_E3S153_PYRTT_861557 and tr_A0A177BU41_A0A177BU41_9PLEO_1460663 are exactly identical! WARNING: Sequences tr_E3S153_E3S153_PYRTT_861557 and tr_A0A2T2N626_A0A2T2N626_CORCC_1448308 are exactly identical! WARNING: Sequences tr_E3S153_E3S153_PYRTT_861557 and tr_A0A2V1DK46_A0A2V1DK46_9PLEO_97972 are exactly identical! WARNING: Sequences tr_E3S153_E3S153_PYRTT_861557 and tr_A0A370JWS6_A0A370JWS6_VENIN_5025 are exactly identical! WARNING: Sequences tr_B6QVP2_B6QVP2_TALMQ_441960 and tr_A0A093VJ74_A0A093VJ74_TALMA_1077442 are exactly identical! WARNING: Sequences tr_D8S2X7_D8S2X7_SELML_88036 and tr_D8S8B2_D8S8B2_SELML_88036 are exactly identical! WARNING: Sequences tr_B7P4S6_B7P4S6_IXOSC_6945 and tr_T1KCI5_T1KCI5_TETUR_32264 are exactly identical! WARNING: Sequences tr_B7P4S6_B7P4S6_IXOSC_6945 and tr_A0A087UPT2_A0A087UPT2_9ARAC_407821 are exactly identical! WARNING: Sequences tr_G2WT16_G2WT16_VERDV_498257 and tr_A0A0G4KRG1_A0A0G4KRG1_9PEZI_100787 are exactly identical! WARNING: Sequences tr_C1GAA0_C1GAA0_PARBD_502780 and tr_C1GQ50_C1GQ50_PARBA_502779 are exactly identical! WARNING: Sequences tr_C0NAQ8_C0NAQ8_AJECG_447093 and tr_C6H4A2_C6H4A2_AJECH_544712 are exactly identical! WARNING: Sequences tr_C0NAQ8_C0NAQ8_AJECG_447093 and tr_F0UJB6_F0UJB6_AJEC8_544711 are exactly identical! WARNING: Sequences tr_C0NAQ8_C0NAQ8_AJECG_447093 and tr_A0A1J9PC81_A0A1J9PC81_9EURO_1447872 are exactly identical! WARNING: Sequences tr_G1K8K0_G1K8K0_ANOCA_28377 and tr_U3KM28_U3KM28_RABIT_9986 are exactly identical! WARNING: Sequences tr_G1K8K0_G1K8K0_ANOCA_28377 and sp_A4UTP7_MEF2C_PIG_9823 are exactly identical! WARNING: Sequences tr_Q7SHQ7_Q7SHQ7_NEUCR_367110 and tr_F7VTA2_F7VTA2_SORMK_771870 are exactly identical! WARNING: Sequences tr_Q7SHQ7_Q7SHQ7_NEUCR_367110 and tr_G4UBZ2_G4UBZ2_NEUT9_510952 are exactly identical! WARNING: Sequences tr_B8N019_B8N019_ASPFN_332952 and tr_Q2UQ16_Q2UQ16_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8N019_B8N019_ASPFN_332952 and tr_A0A0L1JDZ2_A0A0L1JDZ2_ASPNO_1509407 are exactly identical! WARNING: Sequences tr_B8N019_B8N019_ASPFN_332952 and tr_A0A1F7ZWV9_A0A1F7ZWV9_9EURO_109264 are exactly identical! WARNING: Sequences tr_B8N019_B8N019_ASPFN_332952 and tr_A0A1S9DU98_A0A1S9DU98_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_B8N019_B8N019_ASPFN_332952 and tr_A0A2G7FVZ4_A0A2G7FVZ4_9EURO_656916 are exactly identical! WARNING: Sequences tr_B8N019_B8N019_ASPFN_332952 and tr_A0A395H9K0_A0A395H9K0_9EURO_1448316 are exactly identical! WARNING: Sequences tr_Q9U325_Q9U325_CAEEL_6239 and tr_E3LVV0_E3LVV0_CAERE_31234 are exactly identical! WARNING: Sequences tr_C5FQK7_C5FQK7_ARTOC_554155 and tr_E4V4H6_E4V4H6_ARTGP_535722 are exactly identical! WARNING: Sequences tr_C5FQK7_C5FQK7_ARTOC_554155 and tr_F2SLV8_F2SLV8_TRIRC_559305 are exactly identical! WARNING: Sequences tr_C5FQK7_C5FQK7_ARTOC_554155 and tr_D4ALX4_D4ALX4_ARTBC_663331 are exactly identical! WARNING: Sequences tr_C5FQK7_C5FQK7_ARTOC_554155 and tr_F2PPA6_F2PPA6_TRIEC_559882 are exactly identical! WARNING: Sequences tr_C5FQK7_C5FQK7_ARTOC_554155 and tr_A0A059J119_A0A059J119_9EURO_1215338 are exactly identical! WARNING: Sequences tr_C5FQK7_C5FQK7_ARTOC_554155 and tr_A0A178EPH0_A0A178EPH0_TRIRU_5551 are exactly identical! WARNING: Sequences tr_A0A179UC07_A0A179UC07_BLAGS_559298 and tr_A0A2B7X3G9_A0A2B7X3G9_9EURO_2060905 are exactly identical! WARNING: Sequences tr_A0A179UC07_A0A179UC07_BLAGS_559298 and tr_A0A1J9QE77_A0A1J9QE77_9EURO_1658174 are exactly identical! WARNING: Sequences tr_W5Q3K1_W5Q3K1_SHEEP_9940 and tr_H0XM47_H0XM47_OTOGA_30611 are exactly identical! WARNING: Sequences tr_W5Q3K1_W5Q3K1_SHEEP_9940 and tr_F6WS85_F6WS85_XENTR_8364 are exactly identical! WARNING: Sequences tr_W5Q3K1_W5Q3K1_SHEEP_9940 and tr_A0A151PIM6_A0A151PIM6_ALLMI_8496 are exactly identical! WARNING: Sequences tr_W5Q3K1_W5Q3K1_SHEEP_9940 and tr_A0A1V4JU76_A0A1V4JU76_PATFA_372326 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_W7M2E5_W7M2E5_GIBM7_334819 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_A0A0D2XPJ9_A0A0D2XPJ9_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_S0DW33_S0DW33_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_N4UDW5_N4UDW5_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_X0C9P8_X0C9P8_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_A0A2H3TAK0_A0A2H3TAK0_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_A0A2H3I1I1_A0A2H3I1I1_FUSOX_327505 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_A0A2K0WUG2_A0A2K0WUG2_GIBNY_42673 are exactly identical! WARNING: Sequences tr_F9FSQ8_F9FSQ8_FUSOF_660025 and tr_A0A365NE44_A0A365NE44_GIBIN_948311 are exactly identical! WARNING: Sequences tr_E9F798_E9F798_METRA_655844 and tr_A0A0D9NJT3_A0A0D9NJT3_METAN_1291518 are exactly identical! WARNING: Sequences tr_E9ECQ5_E9ECQ5_METAQ_655827 and tr_A0A0B4HRW1_A0A0B4HRW1_METMF_1276143 are exactly identical! WARNING: Sequences tr_Q4WX78_Q4WX78_ASPFU_330879 and tr_A1D7J7_A1D7J7_NEOFI_331117 are exactly identical! WARNING: Sequences tr_Q4WX78_Q4WX78_ASPFU_330879 and tr_A0A0K8LBU9_A0A0K8LBU9_9EURO_91492 are exactly identical! WARNING: Sequences tr_Q4WX78_Q4WX78_ASPFU_330879 and tr_A0A0S7DL26_A0A0S7DL26_9EURO_293939 are exactly identical! WARNING: Sequences tr_Q4WX78_Q4WX78_ASPFU_330879 and tr_A0A229XPP2_A0A229XPP2_9EURO_1245748 are exactly identical! WARNING: Sequences tr_Q4WX78_Q4WX78_ASPFU_330879 and tr_A0A2I1C2P9_A0A2I1C2P9_9EURO_1392255 are exactly identical! WARNING: Sequences tr_A0A3B5PYR1_A0A3B5PYR1_XIPMA_8083 and tr_A0A096M7P6_A0A096M7P6_POEFO_48698 are exactly identical! WARNING: Sequences tr_H9IZA5_H9IZA5_BOMMO_7091 and tr_A0A194PL18_A0A194PL18_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A3B5KIJ9_A0A3B5KIJ9_TAKRU_31033 and tr_H3D623_H3D623_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A3B5KIJ9_A0A3B5KIJ9_TAKRU_31033 and tr_A0A0P7XY45_A0A0P7XY45_9TELE_113540 are exactly identical! WARNING: Sequences tr_G9PBM6_G9PBM6_HYPAI_452589 and tr_A0A0W7VYY6_A0A0W7VYY6_9HYPO_398673 are exactly identical! WARNING: Sequences tr_G9PBM6_G9PBM6_HYPAI_452589 and tr_A0A2T3Z7M7_A0A2T3Z7M7_9HYPO_1042311 are exactly identical! WARNING: Sequences tr_D0N758_D0N758_PHYIT_403677 and tr_W2R2G7_W2R2G7_PHYPN_761204 are exactly identical! WARNING: Sequences tr_D0N758_D0N758_PHYIT_403677 and tr_A0A0W8CN09_A0A0W8CN09_PHYNI_4790 are exactly identical! WARNING: Sequences tr_D0N758_D0N758_PHYIT_403677 and tr_W2KBR1_W2KBR1_PHYPR_4792 are exactly identical! WARNING: Sequences tr_D0N758_D0N758_PHYIT_403677 and tr_A0A329S834_A0A329S834_9STRA_29920 are exactly identical! WARNING: Sequences tr_A0A0K0JMG3_A0A0K0JMG3_BRUMA_6279 and tr_A0A2K6WLZ8_A0A2K6WLZ8_ONCVO_6282 are exactly identical! WARNING: Sequences tr_A0A0K0JMG3_A0A0K0JMG3_BRUMA_6279 and tr_A0A0N4TUF6_A0A0N4TUF6_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0K0JMG3_A0A0K0JMG3_BRUMA_6279 and tr_A0A0R3Q5I5_A0A0R3Q5I5_9BILA_42155 are exactly identical! WARNING: Sequences tr_A0A0K0JMG3_A0A0K0JMG3_BRUMA_6279 and tr_A0A0R3S059_A0A0R3S059_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A0K0JMG3_A0A0K0JMG3_BRUMA_6279 and tr_A0A182E742_A0A182E742_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A0K0JMG3_A0A0K0JMG3_BRUMA_6279 and tr_A0A1I7VY33_A0A1I7VY33_LOALO_7209 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_G7XC35_G7XC35_ASPKW_1033177 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_G3Y229_G3Y229_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_A0A100IUB9_A0A100IUB9_ASPNG_5061 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_A0A146FCX9_A0A146FCX9_9EURO_1069201 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_A0A1L9N8L7_A0A1L9N8L7_ASPTU_767770 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_A0A1L9UVD4_A0A1L9UVD4_9EURO_767769 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_A0A317V4L9_A0A317V4L9_9EURO_1448314 are exactly identical! WARNING: Sequences tr_A2QET8_A2QET8_ASPNC_425011 and tr_A0A319BAD3_A0A319BAD3_9EURO_1450533 are exactly identical! WARNING: Sequences tr_B8AJY2_B8AJY2_ORYSI_39946 and tr_I1PFK3_I1PFK3_ORYGL_4538 are exactly identical! WARNING: Sequences tr_B8AJY2_B8AJY2_ORYSI_39946 and tr_A0A0D3FP75_A0A0D3FP75_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_B8AJY2_B8AJY2_ORYSI_39946 and sp_Q10CQ1_MAD14_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_G9MIV6_G9MIV6_HYPVG_413071 and tr_A0A2T4ACT1_A0A2T4ACT1_TRIHA_983964 are exactly identical! WARNING: Sequences tr_K2RY92_K2RY92_MACPH_1126212 and tr_A0A163JCJ3_A0A163JCJ3_DIDRA_5454 are exactly identical! WARNING: Sequences tr_K2RY92_K2RY92_MACPH_1126212 and tr_A0A1J9S2F8_A0A1J9S2F8_9PEZI_236234 are exactly identical! WARNING: Sequences tr_K2RY92_K2RY92_MACPH_1126212 and tr_A0A1Y1ZGS5_A0A1Y1ZGS5_9PLEO_1231657 are exactly identical! WARNING: Sequences tr_K2RY92_K2RY92_MACPH_1126212 and tr_A0A1Y2M363_A0A1Y2M363_EPING_105696 are exactly identical! WARNING: Sequences tr_A0A212FCK7_A0A212FCK7_DANPL_278856 and tr_A0A0L7LVI2_A0A0L7LVI2_9NEOP_104452 are exactly identical! WARNING: Sequences tr_A0A212FCK7_A0A212FCK7_DANPL_278856 and tr_A0A194R0N3_A0A194R0N3_PAPMA_76193 are exactly identical! WARNING: Sequences tr_A0A212FCK7_A0A212FCK7_DANPL_278856 and tr_A0A2A4IYR6_A0A2A4IYR6_HELVI_7102 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_E3Q3A1_E3Q3A1_COLGM_645133 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_T0KFM3_T0KFM3_COLGC_1237896 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_A0A010R8U8_A0A010R8U8_9PEZI_1445577 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_A0A135UMP5_A0A135UMP5_9PEZI_1209931 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_A0A166RT75_A0A166RT75_9PEZI_708197 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_A0A167D0B7_A0A167D0B7_9PEZI_1573173 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_A0A1G4AX67_A0A1G4AX67_9PEZI_1209926 are exactly identical! WARNING: Sequences tr_H1VQI4_H1VQI4_COLHI_759273 and tr_A0A1Q8REW8_A0A1Q8REW8_9PEZI_708187 are exactly identical! WARNING: Sequences tr_G3PPT2_G3PPT2_GASAC_69293 and tr_A0A2U9BDW5_A0A2U9BDW5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_F9X8N2_F9X8N2_ZYMTI_336722 and tr_A0A0F4G556_A0A0F4G556_9PEZI_1047168 are exactly identical! WARNING: Sequences tr_F9X8N2_F9X8N2_ZYMTI_336722 and tr_A0A1X7RSD4_A0A1X7RSD4_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_G0NXP2_G0NXP2_CAEBE_135651 and tr_A8XFG0_A8XFG0_CAEBR_6238 are exactly identical! WARNING: Sequences tr_G2Y1C3_G2Y1C3_BOTF4_999810 and tr_M7TLH2_M7TLH2_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_G0RTI8_G0RTI8_HYPJQ_431241 and tr_A0A2T4BZ22_A0A2T4BZ22_TRILO_983965 are exactly identical! WARNING: Sequences tr_G0RTI8_G0RTI8_HYPJQ_431241 and tr_A0A2T4BHF0_A0A2T4BHF0_9HYPO_58853 are exactly identical! WARNING: Sequences tr_B3RSU3_B3RSU3_TRIAD_10228 and tr_A0A369SHA7_A0A369SHA7_9METZ_287889 are exactly identical! WARNING: Sequences tr_L5JVD7_L5JVD7_PTEAL_9402 and tr_A0A091CU79_A0A091CU79_FUKDA_885580 are exactly identical! WARNING: Sequences tr_S2J045_S2J045_MUCC1_1220926 and tr_A0A0C9MHU3_A0A0C9MHU3_9FUNG_91626 are exactly identical! WARNING: Sequences tr_S2JNB2_S2JNB2_MUCC1_1220926 and tr_A0A0C9MFK0_A0A0C9MFK0_9FUNG_91626 are exactly identical! WARNING: Sequences tr_T1KCI8_T1KCI8_TETUR_32264 and tr_T1KVB1_T1KVB1_TETUR_32264 are exactly identical! WARNING: Sequences tr_M3D639_M3D639_SPHMS_692275 and tr_A0A2G5HM03_A0A2G5HM03_CERBT_122368 are exactly identical! WARNING: Sequences tr_M3D639_M3D639_SPHMS_692275 and tr_A0A2S6CGJ2_A0A2S6CGJ2_9PEZI_357750 are exactly identical! WARNING: Sequences tr_U5H5Q3_U5H5Q3_USTV1_683840 and tr_A0A2X0PN76_A0A2X0PN76_9BASI_796604 are exactly identical! WARNING: Sequences tr_W5LQ03_W5LQ03_ASTMX_7994 and tr_A0A2I4AU27_A0A2I4AU27_9TELE_52670 are exactly identical! WARNING: Sequences tr_W5LQ03_W5LQ03_ASTMX_7994 and tr_A0A2D0RTU1_A0A2D0RTU1_ICTPU_7998 are exactly identical! WARNING: Sequences tr_W5LQ03_W5LQ03_ASTMX_7994 and tr_A0A2D0RVC9_A0A2D0RVC9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_W4H5D0_W4H5D0_9STRA_112090 and tr_A0A024UFS3_A0A024UFS3_9STRA_157072 are exactly identical! WARNING: Sequences tr_W4H5D0_W4H5D0_9STRA_112090 and tr_A0A067CYN7_A0A067CYN7_SAPPC_695850 are exactly identical! WARNING: Sequences tr_W9X0P0_W9X0P0_9EURO_1182543 and tr_A0A0D2BXK9_A0A0D2BXK9_9EURO_569365 are exactly identical! WARNING: Sequences tr_W9XDX1_W9XDX1_9EURO_1182542 and tr_A0A0D2FED4_A0A0D2FED4_9EURO_5601 are exactly identical! WARNING: Sequences tr_W9XDX1_W9XDX1_9EURO_1182542 and tr_A0A1C1CK58_A0A1C1CK58_9EURO_86049 are exactly identical! WARNING: Sequences tr_W9Y703_W9Y703_9EURO_1182541 and tr_A0A072PJI4_A0A072PJI4_9EURO_1182545 are exactly identical! WARNING: Sequences tr_W9Y703_W9Y703_9EURO_1182541 and tr_A0A0D2DYJ7_A0A0D2DYJ7_9EURO_215243 are exactly identical! WARNING: Sequences tr_A0A017SQL3_A0A017SQL3_9EURO_1388766 and tr_A0A1E3B159_A0A1E3B159_9EURO_573508 are exactly identical! WARNING: Sequences tr_A0A017SQL3_A0A017SQL3_9EURO_1388766 and tr_A0A1L9V7S4_A0A1L9V7S4_ASPGL_1160497 are exactly identical! WARNING: Sequences tr_A0A015I5M7_A0A015I5M7_9GLOM_1432141 and tr_A0A2H5S4N3_A0A2H5S4N3_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015I5M7_A0A015I5M7_9GLOM_1432141 and tr_A0A2Z6RD48_A0A2Z6RD48_9GLOM_94130 are exactly identical! WARNING: Sequences tr_A0A094EK64_A0A094EK64_9PEZI_1420912 and tr_A0A1B8EEX3_A0A1B8EEX3_9PEZI_1524831 are exactly identical! WARNING: Sequences tr_A0A094EK64_A0A094EK64_9PEZI_1420912 and tr_A0A1B8GAB6_A0A1B8GAB6_9PEZI_342668 are exactly identical! WARNING: Sequences tr_A0A094EK64_A0A094EK64_9PEZI_1420912 and tr_A0A1B8C8Z9_A0A1B8C8Z9_9PEZI_1622147 are exactly identical! WARNING: Sequences tr_A0A094EK64_A0A094EK64_9PEZI_1420912 and tr_A0A1B8F0U4_A0A1B8F0U4_9PEZI_1622149 are exactly identical! WARNING: Sequences tr_A0A0B2V3N3_A0A0B2V3N3_TOXCA_6265 and tr_A0A0B2V964_A0A0B2V964_TOXCA_6265 are exactly identical! WARNING: Sequences tr_A0A0B2V3N3_A0A0B2V3N3_TOXCA_6265 and tr_A0A183HE13_A0A183HE13_9BILA_387005 are exactly identical! WARNING: Sequences tr_A0A0D2LZP9_A0A0D2LZP9_GOSRA_29730 and tr_A0A1U8P395_A0A1U8P395_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0D2QLE2_A0A0D2QLE2_GOSRA_29730 and tr_A0A1U8JZF1_A0A1U8JZF1_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0F8UJK1_A0A0F8UJK1_9EURO_308745 and tr_A0A2T5LML4_A0A2T5LML4_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A0K0G106_A0A0K0G106_STRVS_75913 and tr_A0A0K0EKY2_A0A0K0EKY2_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0G106_A0A0K0G106_STRVS_75913 and tr_A0A090L911_A0A090L911_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A0K0G106_A0A0K0G106_STRVS_75913 and tr_A0A0N5A1D8_A0A0N5A1D8_PARTI_131310 are exactly identical! WARNING: Sequences tr_A0A0K0G106_A0A0K0G106_STRVS_75913 and tr_A0A0N5BPN4_A0A0N5BPN4_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0A1ND93_A0A0A1ND93_9FUNG_58291 and tr_A0A2G4T3V0_A0A2G4T3V0_9FUNG_1340429 are exactly identical! WARNING: Sequences tr_A0A0A1ND93_A0A0A1ND93_9FUNG_58291 and tr_A0A367JXE8_A0A367JXE8_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A0A1NHD9_A0A0A1NHD9_9FUNG_58291 and tr_A0A0A1PEP0_A0A0A1PEP0_9FUNG_58291 are exactly identical! WARNING: Sequences tr_A0A0A1NHD9_A0A0A1NHD9_9FUNG_58291 and tr_A0A2G4T5P7_A0A2G4T5P7_9FUNG_1340429 are exactly identical! WARNING: Sequences tr_A0A0A1NHD9_A0A0A1NHD9_9FUNG_58291 and tr_A0A367JG02_A0A367JG02_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A0R3WNN7_A0A0R3WNN7_HYDTA_6205 and tr_A0A0R3W945_A0A0R3W945_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A091JBL0_A0A091JBL0_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A093PPU9_A0A093PPU9_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A091W4U7_A0A091W4U7_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A087RJA8_A0A087RJA8_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A091W8W1_A0A091W8W1_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A091G5P4_A0A091G5P4_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A0A0AML7_A0A0A0AML7_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091EIE2_A0A091EIE2_CORBR_85066 and tr_A0A091IIP7_A0A091IIP7_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091F0D3_A0A091F0D3_CORBR_85066 and tr_A0A091UK71_A0A091UK71_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091F0D3_A0A091F0D3_CORBR_85066 and tr_A0A087RA04_A0A087RA04_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091F0D3_A0A091F0D3_CORBR_85066 and tr_A0A091GDE1_A0A091GDE1_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091F0D3_A0A091F0D3_CORBR_85066 and tr_A0A0A0AY95_A0A0A0AY95_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091F0D3_A0A091F0D3_CORBR_85066 and tr_A0A091INN8_A0A091INN8_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A0L9VIN7_A0A0L9VIN7_PHAAN_3914 and tr_A0A1S3UU87_A0A1S3UU87_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A0L9VIN7_A0A0L9VIN7_PHAAN_3914 and tr_A0A3Q0EUK6_A0A3Q0EUK6_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A0L9VIN7_A0A0L9VIN7_PHAAN_3914 and tr_A0A3Q0EUL2_A0A3Q0EUL2_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A0L9VIN7_A0A0L9VIN7_PHAAN_3914 and tr_A0A3Q0EVF7_A0A3Q0EVF7_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A093PRA2_A0A093PRA2_9PASS_328815 and tr_A0A087QKR1_A0A087QKR1_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A093PRA2_A0A093PRA2_9PASS_328815 and tr_A0A093GHD9_A0A093GHD9_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A0L8GCM9_A0A0L8GCM9_OCTBM_37653 and tr_A0A1S3HF45_A0A1S3HF45_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A0L8GCM9_A0A0L8GCM9_OCTBM_37653 and tr_A0A210R4Y8_A0A210R4Y8_MIZYE_6573 are exactly identical! WARNING: Sequences tr_A0A0L0RWR0_A0A0L0RWR0_ALLMA_578462 and tr_A0A0L0S1D1_A0A0L0S1D1_ALLMA_578462 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V1CX26_A0A0V1CX26_TRIBR_45882 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V0VAS7_A0A0V0VAS7_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V1A196_A0A0V1A196_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V0Y4R8_A0A0V0Y4R8_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V1ME16_A0A0V1ME16_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V1NR94_A0A0V1NR94_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V1HVY2_A0A0V1HVY2_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0RX89_A0A0V0RX89_9BILA_6336 and tr_A0A0V0U4D5_A0A0V0U4D5_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A194XXT8_A0A194XXT8_9HELO_149040 and tr_A0A1L7WS61_A0A1L7WS61_9HELO_576137 are exactly identical! WARNING: Sequences tr_A0A194W4E9_A0A194W4E9_9PEZI_105487 and tr_A0A194V489_A0A194V489_9PEZI_694573 are exactly identical! WARNING: Sequences tr_A0A194W4E9_A0A194W4E9_9PEZI_105487 and tr_A0A2T3A5X2_A0A2T3A5X2_9PEZI_2025994 are exactly identical! WARNING: Sequences tr_A0A1S3NQP1_A0A1S3NQP1_SALSA_8030 and tr_A0A1S3RVF5_A0A1S3RVF5_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3NQP1_A0A1S3NQP1_SALSA_8030 and tr_A0A060WYV0_A0A060WYV0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NQP1_A0A1S3NQP1_SALSA_8030 and tr_A0A060YZU0_A0A060YZU0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3V4F3_A0A1S3V4F3_VIGRR_3916 and tr_A0A3Q0FFF3_A0A3Q0FFF3_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A1L9WT97_A0A1L9WT97_ASPAC_690307 and tr_A0A317VBD6_A0A317VBD6_9EURO_1450535 are exactly identical! WARNING: Sequences tr_A0A1L9WT97_A0A1L9WT97_ASPAC_690307 and tr_A0A319D6B6_A0A319D6B6_9EURO_1448320 are exactly identical! WARNING: Sequences tr_A0A1L9WT97_A0A1L9WT97_ASPAC_690307 and tr_A0A319CVY7_A0A319CVY7_9EURO_1448315 are exactly identical! WARNING: Sequences tr_A0A1L9WT97_A0A1L9WT97_ASPAC_690307 and tr_A0A319DXV4_A0A319DXV4_9EURO_1448318 are exactly identical! WARNING: Sequences tr_A0A1L9WT97_A0A1L9WT97_ASPAC_690307 and tr_A0A2V5II08_A0A2V5II08_9EURO_1450541 are exactly identical! WARNING: Sequences tr_A0A1V8UM89_A0A1V8UM89_9PEZI_1974281 and tr_A0A1V8SJU4_A0A1V8SJU4_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A1V8UM89_A0A1V8UM89_9PEZI_1974281 and tr_A0A1V8SMI6_A0A1V8SMI6_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A1Y1V4Z5_A0A1Y1V4Z5_9FUNG_1754191 and tr_A0A1Y2AAR4_A0A1Y2AAR4_9FUNG_1754190 are exactly identical! WARNING: Sequences tr_A0A1Y1V4Z5_A0A1Y1V4Z5_9FUNG_1754191 and tr_A0A1Y2CWF2_A0A1Y2CWF2_9FUNG_1754190 are exactly identical! WARNING: Sequences tr_A0A1Y1V4Z5_A0A1Y1V4Z5_9FUNG_1754191 and tr_A0A1Y1WSC8_A0A1Y1WSC8_9FUNG_1754192 are exactly identical! WARNING: Sequences tr_A0A2H3IK28_A0A2H3IK28_9EURO_290292 and tr_A0A364L948_A0A364L948_9EURO_1196081 are exactly identical! WARNING: Sequences tr_A0A2I2FCN5_A0A2I2FCN5_9EURO_41067 and tr_A0A2J5HXZ2_A0A2J5HXZ2_9EURO_482145 are exactly identical! WARNING: Sequences tr_A0A2J6PQR2_A0A2J6PQR2_9HELO_1745343 and tr_A0A2J6QUC1_A0A2J6QUC1_9HELO_1149755 are exactly identical! WARNING: Sequences tr_A0A2G4SSD4_A0A2G4SSD4_9FUNG_1340429 and tr_A0A367JZ40_A0A367JZ40_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A318ZK40_A0A318ZK40_9EURO_1450539 and tr_A0A395HWK0_A0A395HWK0_9EURO_1450537 are exactly identical! WARNING: Duplicate sequences found: 530 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/3_mltree/Q06413.raxml.reduced.phy Alignment comprises 1 partitions and 83 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 83 / 83 Gaps: 2.72 % Invariant sites: 1.20 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/3_mltree/Q06413.raxml.rba Parallelization scheme autoconfig: 2 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 989 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 83 / 6640 [00:00:00] Data distribution: max. searches per worker: 10 Starting ML tree search with 20 distinct starting trees [00:00:00 -83612.498677] Initial branch length optimization [00:00:01 -60710.567429] Model parameter optimization (eps = 10.000000) [00:00:20 -60517.129237] AUTODETECT spr round 1 (radius: 5) [00:01:38 -40559.023683] AUTODETECT spr round 2 (radius: 10) [00:02:59 -30833.886394] AUTODETECT spr round 3 (radius: 15) [00:04:24 -26629.585046] AUTODETECT spr round 4 (radius: 20) [00:05:57 -24095.852921] AUTODETECT spr round 5 (radius: 25) [00:07:42 -22405.963477] SPR radius for FAST iterations: 25 (autodetect) [00:07:42 -22405.963477] Model parameter optimization (eps = 3.000000) [00:08:03 -22352.414301] FAST spr round 1 (radius: 25) [00:09:40 -16499.504989] FAST spr round 2 (radius: 25) [00:11:04 -15059.418160] FAST spr round 3 (radius: 25) [00:12:23 -14834.869586] FAST spr round 4 (radius: 25) [00:13:38 -14793.982835] FAST spr round 5 (radius: 25) [00:14:48 -14793.981899] Model parameter optimization (eps = 1.000000) [00:15:01 -14791.049731] SLOW spr round 1 (radius: 5) [00:16:11 -14788.993116] SLOW spr round 2 (radius: 5) [00:17:21 -14783.859750] SLOW spr round 3 (radius: 5) [00:18:29 -14783.859696] SLOW spr round 4 (radius: 10) [00:19:49 -14595.139968] SLOW spr round 5 (radius: 5) [00:21:08 -14521.641111] SLOW spr round 6 (radius: 5) [00:22:21 -14514.798197] SLOW spr round 7 (radius: 5) [00:23:28 -14514.798081] SLOW spr round 8 (radius: 10) [00:24:44 -14456.920321] SLOW spr round 9 (radius: 5) [00:26:01 -14450.986573] SLOW spr round 10 (radius: 5) [00:27:10 -14450.986571] SLOW spr round 11 (radius: 10) [00:28:27 -14376.197681] SLOW spr round 12 (radius: 5) [00:29:46 -14344.272207] SLOW spr round 13 (radius: 5) [00:30:57 -14338.650025] SLOW spr round 14 (radius: 5) [00:32:04 -14338.650018] SLOW spr round 15 (radius: 10) [00:33:18 -14331.475425] SLOW spr round 16 (radius: 5) [00:34:33 -14331.475425] SLOW spr round 17 (radius: 10) [00:35:47 -14331.123866] SLOW spr round 18 (radius: 5) [00:37:03 -14331.123866] SLOW spr round 19 (radius: 10) [00:38:17 -14331.123866] SLOW spr round 20 (radius: 15) [00:39:48 -14329.759015] SLOW spr round 21 (radius: 5) [00:41:07 -14329.555722] SLOW spr round 22 (radius: 5) [00:42:18 -14329.555714] SLOW spr round 23 (radius: 10) [00:43:33 -14328.913318] SLOW spr round 24 (radius: 5) [00:44:49 -14328.541564] SLOW spr round 25 (radius: 5) [00:45:59 -14328.541540] SLOW spr round 26 (radius: 10) [00:47:13 -14328.541540] SLOW spr round 27 (radius: 15) [00:48:43 -14328.541540] SLOW spr round 28 (radius: 20) [00:50:35 -14286.022332] SLOW spr round 29 (radius: 5) [00:51:58 -14285.721034] SLOW spr round 30 (radius: 5) [00:53:13 -14285.720343] SLOW spr round 31 (radius: 10) [00:54:29 -14279.744663] SLOW spr round 32 (radius: 5) [00:55:50 -14270.855696] SLOW spr round 33 (radius: 5) [00:57:02 -14270.282692] SLOW spr round 34 (radius: 5) [00:58:10 -14270.282643] SLOW spr round 35 (radius: 10) [00:59:24 -14270.282643] SLOW spr round 36 (radius: 15) [01:00:57 -14270.282485] SLOW spr round 37 (radius: 20) [01:01:19] [worker #1] ML tree search #2, logLikelihood: -15565.986696 [01:02:54 -14267.577276] SLOW spr round 38 (radius: 5) [01:04:17 -14264.657777] SLOW spr round 39 (radius: 5) [01:05:30 -14264.657482] SLOW spr round 40 (radius: 10) [01:06:45 -14264.657390] SLOW spr round 41 (radius: 15) [01:08:19 -14264.657364] SLOW spr round 42 (radius: 20) [01:10:15 -14264.657357] SLOW spr round 43 (radius: 25) [01:12:35 -14264.657355] Model parameter optimization (eps = 0.100000) [01:12:43] [worker #0] ML tree search #1, logLikelihood: -14264.537004 [01:12:43 -82943.035282] Initial branch length optimization [01:12:44 -60111.337756] Model parameter optimization (eps = 10.000000) [01:13:07 -59952.925243] AUTODETECT spr round 1 (radius: 5) [01:14:27 -41304.674703] AUTODETECT spr round 2 (radius: 10) [01:15:51 -32310.497952] AUTODETECT spr round 3 (radius: 15) [01:17:19 -26668.215955] AUTODETECT spr round 4 (radius: 20) [01:19:05 -21619.969974] AUTODETECT spr round 5 (radius: 25) [01:20:50 -19604.053098] SPR radius for FAST iterations: 25 (autodetect) [01:20:50 -19604.053098] Model parameter optimization (eps = 3.000000) [01:21:06 -19533.989231] FAST spr round 1 (radius: 25) [01:22:39 -16364.243179] FAST spr round 2 (radius: 25) [01:23:56 -16059.797580] FAST spr round 3 (radius: 25) [01:25:09 -16037.883379] FAST spr round 4 (radius: 25) [01:26:19 -16035.787574] FAST spr round 5 (radius: 25) [01:27:27 -16035.786315] Model parameter optimization (eps = 1.000000) [01:27:35 -16034.574087] SLOW spr round 1 (radius: 5) [01:28:47 -16032.426408] SLOW spr round 2 (radius: 5) [01:29:59 -16030.873063] SLOW spr round 3 (radius: 5) [01:31:10 -16030.872273] SLOW spr round 4 (radius: 10) [01:32:26 -16030.872162] SLOW spr round 5 (radius: 15) [01:34:00 -16000.145327] SLOW spr round 6 (radius: 5) [01:35:26 -15996.712603] SLOW spr round 7 (radius: 5) [01:36:43 -15996.425746] SLOW spr round 8 (radius: 5) [01:37:54 -15996.425573] SLOW spr round 9 (radius: 10) [01:39:09 -15993.711548] SLOW spr round 10 (radius: 5) [01:40:27 -15993.711451] SLOW spr round 11 (radius: 10) [01:41:44 -15993.711394] SLOW spr round 12 (radius: 15) [01:43:16 -15993.711348] SLOW spr round 13 (radius: 20) [01:45:10 -15979.429922] SLOW spr round 14 (radius: 5) [01:46:37 -15969.182966] SLOW spr round 15 (radius: 5) [01:47:53 -15969.182867] SLOW spr round 16 (radius: 10) [01:49:08 -15969.182829] SLOW spr round 17 (radius: 15) [01:50:42 -15969.182808] SLOW spr round 18 (radius: 20) [01:52:37 -15969.182793] SLOW spr round 19 (radius: 25) [01:54:47 -15963.086850] SLOW spr round 20 (radius: 5) [01:56:12 -15963.085151] SLOW spr round 21 (radius: 10) [01:57:06] [worker #1] ML tree search #4, logLikelihood: -14569.620085 [01:57:33 -15963.084178] SLOW spr round 22 (radius: 15) [01:59:06 -15963.083616] SLOW spr round 23 (radius: 20) [02:01:01 -15963.083290] SLOW spr round 24 (radius: 25) [02:03:13 -15963.083098] Model parameter optimization (eps = 0.100000) [02:03:19] [worker #0] ML tree search #3, logLikelihood: -15963.004898 [02:03:19 -84836.614552] Initial branch length optimization [02:03:21 -61336.406834] Model parameter optimization (eps = 10.000000) [02:03:37 -61155.514215] AUTODETECT spr round 1 (radius: 5) [02:04:58 -40719.403369] AUTODETECT spr round 2 (radius: 10) [02:06:22 -31128.772066] AUTODETECT spr round 3 (radius: 15) [02:07:48 -26785.892391] AUTODETECT spr round 4 (radius: 20) [02:09:23 -22350.732156] AUTODETECT spr round 5 (radius: 25) [02:11:03 -21725.071099] SPR radius for FAST iterations: 25 (autodetect) [02:11:03 -21725.071099] Model parameter optimization (eps = 3.000000) [02:11:20 -21661.052950] FAST spr round 1 (radius: 25) [02:12:53 -17383.899228] FAST spr round 2 (radius: 25) [02:14:14 -16454.073590] FAST spr round 3 (radius: 25) [02:15:30 -16344.621270] FAST spr round 4 (radius: 25) [02:16:44 -16333.623420] FAST spr round 5 (radius: 25) [02:17:55 -16332.772161] FAST spr round 6 (radius: 25) [02:19:07 -16332.771534] Model parameter optimization (eps = 1.000000) [02:19:17 -16331.173974] SLOW spr round 1 (radius: 5) [02:20:29 -16327.948087] SLOW spr round 2 (radius: 5) [02:21:39 -16325.743774] SLOW spr round 3 (radius: 5) [02:22:48 -16325.743711] SLOW spr round 4 (radius: 10) [02:24:10 -15543.516113] SLOW spr round 5 (radius: 5) [02:25:29 -15220.788824] SLOW spr round 6 (radius: 5) [02:26:43 -14935.552855] SLOW spr round 7 (radius: 5) [02:27:56 -14823.171425] SLOW spr round 8 (radius: 5) [02:29:08 -14807.663187] SLOW spr round 9 (radius: 5) [02:30:18 -14807.663031] SLOW spr round 10 (radius: 10) [02:31:37 -14655.314651] SLOW spr round 11 (radius: 5) [02:32:56 -14551.599616] SLOW spr round 12 (radius: 5) [02:34:10 -14538.685200] SLOW spr round 13 (radius: 5) [02:35:19 -14538.685166] SLOW spr round 14 (radius: 10) [02:36:36 -14537.742563] SLOW spr round 15 (radius: 5) [02:37:52 -14537.742553] SLOW spr round 16 (radius: 10) [02:39:10 -14533.541919] SLOW spr round 17 (radius: 5) [02:40:26 -14533.475948] SLOW spr round 18 (radius: 10) [02:41:45 -14507.471854] SLOW spr round 19 (radius: 5) [02:43:02 -14507.316036] SLOW spr round 20 (radius: 5) [02:44:11 -14507.315881] SLOW spr round 21 (radius: 10) [02:45:28 -14507.225956] SLOW spr round 22 (radius: 15) [02:47:02 -14506.937926] SLOW spr round 23 (radius: 5) [02:48:23 -14506.936344] SLOW spr round 24 (radius: 10) [02:49:42 -14506.583398] SLOW spr round 25 (radius: 5) [02:50:57 -14506.582210] SLOW spr round 26 (radius: 10) [02:52:13 -14506.581391] SLOW spr round 27 (radius: 15) [02:53:50 -14506.581389] SLOW spr round 28 (radius: 20) [02:55:58 -14505.458409] SLOW spr round 29 (radius: 5) [02:57:29 -14497.989260] SLOW spr round 30 (radius: 5) [02:58:48 -14495.886375] SLOW spr round 31 (radius: 5) [03:00:01 -14495.886371] SLOW spr round 32 (radius: 10) [03:01:20 -14495.886369] SLOW spr round 33 (radius: 15) [03:02:58 -14495.886368] SLOW spr round 34 (radius: 20) [03:05:04 -14495.886367] SLOW spr round 35 (radius: 25) [03:07:37 -14431.473394] SLOW spr round 36 (radius: 5) [03:09:06 -14421.351333] SLOW spr round 37 (radius: 5) [03:10:28 -14420.235027] SLOW spr round 38 (radius: 5) [03:11:05] [worker #1] ML tree search #6, logLikelihood: -14835.342000 [03:11:42 -14420.228580] SLOW spr round 39 (radius: 10) [03:13:02 -14420.227956] SLOW spr round 40 (radius: 15) [03:14:41 -14420.227439] SLOW spr round 41 (radius: 20) [03:16:47 -14415.074328] SLOW spr round 42 (radius: 5) [03:18:17 -14412.997498] SLOW spr round 43 (radius: 5) [03:19:39 -14378.440928] SLOW spr round 44 (radius: 5) [03:20:56 -14375.269436] SLOW spr round 45 (radius: 5) [03:22:10 -14375.267963] SLOW spr round 46 (radius: 10) [03:23:31 -14375.264730] SLOW spr round 47 (radius: 15) [03:25:10 -14375.264728] SLOW spr round 48 (radius: 20) [03:27:15 -14375.264718] SLOW spr round 49 (radius: 25) [03:29:40 -14374.665078] SLOW spr round 50 (radius: 5) [03:31:09 -14374.662309] SLOW spr round 51 (radius: 10) [03:32:35 -14374.168329] SLOW spr round 52 (radius: 5) [03:33:56 -14374.168328] SLOW spr round 53 (radius: 10) [03:35:17 -14374.168325] SLOW spr round 54 (radius: 15) [03:36:56 -14373.910044] SLOW spr round 55 (radius: 5) [03:38:23 -14373.902753] SLOW spr round 56 (radius: 10) [03:39:48 -14373.902751] SLOW spr round 57 (radius: 15) [03:41:26 -14373.887023] SLOW spr round 58 (radius: 20) [03:43:30 -14373.887022] SLOW spr round 59 (radius: 25) [03:45:52 -14373.832451] Model parameter optimization (eps = 0.100000) [03:46:04] [worker #0] ML tree search #5, logLikelihood: -14370.542839 [03:46:04 -84139.193927] Initial branch length optimization [03:46:06 -61002.446156] Model parameter optimization (eps = 10.000000) [03:46:24 -60830.389536] AUTODETECT spr round 1 (radius: 5) [03:47:48 -40285.889357] AUTODETECT spr round 2 (radius: 10) [03:49:14 -30517.655366] AUTODETECT spr round 3 (radius: 15) [03:50:42 -26756.791633] AUTODETECT spr round 4 (radius: 20) [03:52:20 -24063.522014] AUTODETECT spr round 5 (radius: 25) [03:54:04 -23226.955419] SPR radius for FAST iterations: 25 (autodetect) [03:54:04 -23226.955419] Model parameter optimization (eps = 3.000000) [03:54:20 -23169.133942] FAST spr round 1 (radius: 25) [03:56:06 -18898.008837] FAST spr round 2 (radius: 25) [03:57:34 -18266.710517] FAST spr round 3 (radius: 25) [03:58:56 -18169.178019] FAST spr round 4 (radius: 25) [04:00:16 -18163.323849] FAST spr round 5 (radius: 25) [04:01:33 -18162.407168] FAST spr round 6 (radius: 25) [04:02:50 -18159.446851] FAST spr round 7 (radius: 25) [04:04:07 -18159.442444] Model parameter optimization (eps = 1.000000) [04:04:20 -18155.509473] SLOW spr round 1 (radius: 5) [04:05:37 -18152.679306] SLOW spr round 2 (radius: 5) [04:06:54 -18151.961417] SLOW spr round 3 (radius: 5) [04:08:09 -18151.960431] SLOW spr round 4 (radius: 10) [04:09:30 -18144.826361] SLOW spr round 5 (radius: 5) [04:10:55 -18140.840460] SLOW spr round 6 (radius: 5) [04:12:13 -18140.787566] SLOW spr round 7 (radius: 10) [04:13:34 -18140.138317] SLOW spr round 8 (radius: 5) [04:14:57 -18138.170062] SLOW spr round 9 (radius: 5) [04:16:15 -18138.044930] SLOW spr round 10 (radius: 5) [04:16:42] [worker #1] ML tree search #8, logLikelihood: -14653.111815 [04:17:31 -18138.044838] SLOW spr round 11 (radius: 10) [04:18:51 -18138.044809] SLOW spr round 12 (radius: 15) [04:20:24 -18133.853336] SLOW spr round 13 (radius: 5) [04:21:50 -18133.853293] SLOW spr round 14 (radius: 10) [04:23:14 -18130.995802] SLOW spr round 15 (radius: 5) [04:24:36 -18130.995774] SLOW spr round 16 (radius: 10) [04:25:58 -18130.995749] SLOW spr round 17 (radius: 15) [04:27:29 -18130.995727] SLOW spr round 18 (radius: 20) [04:29:13 -18128.147644] SLOW spr round 19 (radius: 5) [04:30:44 -18126.155385] SLOW spr round 20 (radius: 5) [04:32:07 -18125.472554] SLOW spr round 21 (radius: 5) [04:33:23 -18125.472484] SLOW spr round 22 (radius: 10) [04:34:44 -18125.472469] SLOW spr round 23 (radius: 15) [04:36:16 -18125.472461] SLOW spr round 24 (radius: 20) [04:37:59 -18125.472455] SLOW spr round 25 (radius: 25) [04:39:53 -18125.472449] Model parameter optimization (eps = 0.100000) [04:40:04] [worker #0] ML tree search #7, logLikelihood: -18125.203550 [04:40:04 -84547.222177] Initial branch length optimization [04:40:05 -61198.910857] Model parameter optimization (eps = 10.000000) [04:40:30 -61025.904851] AUTODETECT spr round 1 (radius: 5) [04:41:54 -41247.111486] AUTODETECT spr round 2 (radius: 10) [04:43:23 -29792.571368] AUTODETECT spr round 3 (radius: 15) [04:44:54 -23779.315096] AUTODETECT spr round 4 (radius: 20) [04:46:30 -21207.352880] AUTODETECT spr round 5 (radius: 25) [04:48:16 -18809.168694] SPR radius for FAST iterations: 25 (autodetect) [04:48:16 -18809.168694] Model parameter optimization (eps = 3.000000) [04:48:34 -18748.614187] FAST spr round 1 (radius: 25) [04:50:13 -15486.334291] FAST spr round 2 (radius: 25) [04:51:34 -14955.338294] FAST spr round 3 (radius: 25) [04:52:51 -14818.752815] FAST spr round 4 (radius: 25) [04:54:07 -14815.933490] FAST spr round 5 (radius: 25) [04:55:24 -14810.034801] FAST spr round 6 (radius: 25) [04:56:41 -14809.169649] FAST spr round 7 (radius: 25) [04:57:59 -14807.448346] FAST spr round 8 (radius: 25) [04:59:16 -14807.446553] Model parameter optimization (eps = 1.000000) [04:59:24 -14806.058264] SLOW spr round 1 (radius: 5) [05:00:38 -14797.909023] SLOW spr round 2 (radius: 5) [05:01:52 -14791.691990] SLOW spr round 3 (radius: 5) [05:03:06 -14791.537919] SLOW spr round 4 (radius: 5) [05:04:19 -14791.537827] SLOW spr round 5 (radius: 10) [05:05:39 -14789.364536] SLOW spr round 6 (radius: 5) [05:07:00 -14787.819620] SLOW spr round 7 (radius: 5) [05:08:14 -14787.819572] SLOW spr round 8 (radius: 10) [05:09:33 -14787.121562] SLOW spr round 9 (radius: 5) [05:10:53 -14787.121557] SLOW spr round 10 (radius: 10) [05:12:11 -14785.634701] SLOW spr round 11 (radius: 5) [05:13:32 -14785.634692] SLOW spr round 12 (radius: 10) [05:14:50 -14785.634688] SLOW spr round 13 (radius: 15) [05:16:24 -14785.634668] SLOW spr round 14 (radius: 20) [05:18:13 -14773.570086] SLOW spr round 15 (radius: 5) [05:19:43 -14769.743960] SLOW spr round 16 (radius: 5) [05:21:04 -14761.771334] SLOW spr round 17 (radius: 5) [05:22:19 -14760.138870] SLOW spr round 18 (radius: 5) [05:23:32 -14760.138708] SLOW spr round 19 (radius: 10) [05:24:50 -14760.138593] SLOW spr round 20 (radius: 15) [05:26:23 -14760.138503] SLOW spr round 21 (radius: 20) [05:28:09 -14760.138432] SLOW spr round 22 (radius: 25) [05:30:08 -14760.138385] Model parameter optimization (eps = 0.100000) [05:30:17] [worker #0] ML tree search #9, logLikelihood: -14759.559545 [05:30:17 -84012.142382] Initial branch length optimization [05:30:18 -60889.136677] Model parameter optimization (eps = 10.000000) [05:30:40 -60716.362607] AUTODETECT spr round 1 (radius: 5) [05:32:05 -40851.239592] AUTODETECT spr round 2 (radius: 10) [05:33:32 -30854.115235] AUTODETECT spr round 3 (radius: 15) [05:35:06 -26344.575672] AUTODETECT spr round 4 (radius: 20) [05:36:46 -22085.760847] AUTODETECT spr round 5 (radius: 25) [05:38:27 -19894.884483] SPR radius for FAST iterations: 25 (autodetect) [05:38:27 -19894.884483] Model parameter optimization (eps = 3.000000) [05:38:43 -19859.046233] FAST spr round 1 (radius: 25) [05:40:22 -16030.874551] FAST spr round 2 (radius: 25) [05:41:51 -15282.841982] FAST spr round 3 (radius: 25) [05:43:13 -15151.827248] FAST spr round 4 (radius: 25) [05:44:30 -15015.864865] FAST spr round 5 (radius: 25) [05:45:46 -14967.525451] FAST spr round 6 (radius: 25) [05:46:59 -14967.523103] Model parameter optimization (eps = 1.000000) [05:47:12 -14955.077315] SLOW spr round 1 (radius: 5) [05:48:25 -14945.639397] SLOW spr round 2 (radius: 5) [05:49:37 -14943.929896] SLOW spr round 3 (radius: 5) [05:50:48 -14943.927850] SLOW spr round 4 (radius: 10) [05:52:08 -14856.376304] SLOW spr round 5 (radius: 5) [05:53:32 -14759.719769] SLOW spr round 6 (radius: 5) [05:54:48 -14734.262420] SLOW spr round 7 (radius: 5) [05:56:01 -14707.105255] SLOW spr round 8 (radius: 5) [05:57:11 -14707.105065] SLOW spr round 9 (radius: 10) [05:58:29 -14669.632757] SLOW spr round 10 (radius: 5) [05:59:50 -14656.101065] SLOW spr round 11 (radius: 5) [06:01:03 -14656.100980] SLOW spr round 12 (radius: 10) [06:02:20 -14656.100943] SLOW spr round 13 (radius: 15) [06:04:00 -14578.398276] SLOW spr round 14 (radius: 5) [06:05:26 -14554.117764] SLOW spr round 15 (radius: 5) [06:06:43 -14554.112506] SLOW spr round 16 (radius: 10) [06:08:01 -14554.111873] SLOW spr round 17 (radius: 15) [06:09:11] [worker #1] ML tree search #10, logLikelihood: -14122.705021 [06:09:39 -14553.732328] SLOW spr round 18 (radius: 5) [06:11:02 -14553.732138] SLOW spr round 19 (radius: 10) [06:12:25 -14553.732124] SLOW spr round 20 (radius: 15) [06:14:00 -14553.380521] SLOW spr round 21 (radius: 5) [06:15:24 -14553.380514] SLOW spr round 22 (radius: 10) [06:16:47 -14553.380508] SLOW spr round 23 (radius: 15) [06:18:22 -14553.380504] SLOW spr round 24 (radius: 20) [06:20:19 -14490.501822] SLOW spr round 25 (radius: 5) [06:21:45 -14490.447830] SLOW spr round 26 (radius: 10) [06:23:10 -14490.447643] SLOW spr round 27 (radius: 15) [06:24:48 -14490.271852] SLOW spr round 28 (radius: 5) [06:26:13 -14490.271778] SLOW spr round 29 (radius: 10) [06:27:36 -14490.271776] SLOW spr round 30 (radius: 15) [06:29:12 -14490.271776] SLOW spr round 31 (radius: 20) [06:31:08 -14490.271766] SLOW spr round 32 (radius: 25) [06:33:17 -14487.661906] SLOW spr round 33 (radius: 5) [06:34:45 -14483.534920] SLOW spr round 34 (radius: 5) [06:36:02 -14483.534892] SLOW spr round 35 (radius: 10) [06:37:21 -14483.534891] SLOW spr round 36 (radius: 15) [06:38:57 -14483.534889] SLOW spr round 37 (radius: 20) [06:40:54 -14483.330648] SLOW spr round 38 (radius: 5) [06:42:19 -14483.330642] SLOW spr round 39 (radius: 10) [06:43:43 -14483.330640] SLOW spr round 40 (radius: 15) [06:45:19 -14483.330638] SLOW spr round 41 (radius: 20) [06:47:15 -14483.330637] SLOW spr round 42 (radius: 25) [06:49:22 -14483.330635] Model parameter optimization (eps = 0.100000) [06:49:29] [worker #0] ML tree search #11, logLikelihood: -14482.988028 [06:49:29 -83863.843433] Initial branch length optimization [06:49:31 -60830.260511] Model parameter optimization (eps = 10.000000) [06:49:49 -60665.302218] AUTODETECT spr round 1 (radius: 5) [06:51:13 -40840.824177] AUTODETECT spr round 2 (radius: 10) [06:52:41 -31048.192961] AUTODETECT spr round 3 (radius: 15) [06:54:10 -26306.183399] AUTODETECT spr round 4 (radius: 20) [06:55:49 -22567.755401] AUTODETECT spr round 5 (radius: 25) [06:57:35 -20881.074777] SPR radius for FAST iterations: 25 (autodetect) [06:57:35 -20881.074777] Model parameter optimization (eps = 3.000000) [06:57:48 -20847.021616] FAST spr round 1 (radius: 25) [06:59:24 -16153.714743] FAST spr round 2 (radius: 25) [07:00:45 -15719.000952] FAST spr round 3 (radius: 25) [07:02:01 -15579.402184] FAST spr round 4 (radius: 25) [07:02:25] [worker #1] ML tree search #12, logLikelihood: -14355.331117 [07:03:17 -15508.628729] FAST spr round 5 (radius: 25) [07:04:32 -15489.298861] FAST spr round 6 (radius: 25) [07:05:44 -15489.298257] Model parameter optimization (eps = 1.000000) [07:06:02 -15484.221420] SLOW spr round 1 (radius: 5) [07:07:14 -15478.051276] SLOW spr round 2 (radius: 5) [07:08:26 -15432.680647] SLOW spr round 3 (radius: 5) [07:09:38 -15415.168833] SLOW spr round 4 (radius: 5) [07:10:50 -15414.946471] SLOW spr round 5 (radius: 5) [07:12:03 -15414.943893] SLOW spr round 6 (radius: 10) [07:13:25 -15374.011300] SLOW spr round 7 (radius: 5) [07:14:46 -15370.876608] SLOW spr round 8 (radius: 5) [07:16:00 -15370.876511] SLOW spr round 9 (radius: 10) [07:17:20 -15370.876462] SLOW spr round 10 (radius: 15) [07:18:57 -15361.172046] SLOW spr round 11 (radius: 5) [07:20:24 -15318.906385] SLOW spr round 12 (radius: 5) [07:21:44 -15318.839910] SLOW spr round 13 (radius: 10) [07:23:07 -15318.826748] SLOW spr round 14 (radius: 15) [07:24:42 -15318.483547] SLOW spr round 15 (radius: 5) [07:26:09 -15318.483511] SLOW spr round 16 (radius: 10) [07:27:36 -15318.483447] SLOW spr round 17 (radius: 15) [07:29:12 -15318.483433] SLOW spr round 18 (radius: 20) [07:31:04 -15318.131838] SLOW spr round 19 (radius: 5) [07:32:31 -15318.131833] SLOW spr round 20 (radius: 10) [07:33:56 -15318.131820] SLOW spr round 21 (radius: 15) [07:35:33 -15318.131815] SLOW spr round 22 (radius: 20) [07:37:28 -15318.131811] SLOW spr round 23 (radius: 25) [07:39:48 -15318.082624] Model parameter optimization (eps = 0.100000) [07:39:55] [worker #0] ML tree search #13, logLikelihood: -15317.879312 [07:39:55 -83738.930487] Initial branch length optimization [07:39:56 -60687.492020] Model parameter optimization (eps = 10.000000) [07:40:23 -60512.992326] AUTODETECT spr round 1 (radius: 5) [07:41:47 -40011.719189] AUTODETECT spr round 2 (radius: 10) [07:43:13 -30550.835114] AUTODETECT spr round 3 (radius: 15) [07:44:43 -24807.775700] AUTODETECT spr round 4 (radius: 20) [07:46:23 -20819.376262] AUTODETECT spr round 5 (radius: 25) [07:48:03 -19129.494291] SPR radius for FAST iterations: 25 (autodetect) [07:48:03 -19129.494291] Model parameter optimization (eps = 3.000000) [07:48:21 -19074.903824] FAST spr round 1 (radius: 25) [07:50:05 -15756.089869] FAST spr round 2 (radius: 25) [07:51:31 -15368.279448] FAST spr round 3 (radius: 25) [07:52:52 -15311.306769] FAST spr round 4 (radius: 25) [07:54:11 -15259.038199] FAST spr round 5 (radius: 25) [07:55:29 -15235.875946] FAST spr round 6 (radius: 25) [07:56:46 -15234.448871] FAST spr round 7 (radius: 25) [07:58:01 -15234.448736] Model parameter optimization (eps = 1.000000) [07:58:14 -15232.969841] SLOW spr round 1 (radius: 5) [07:59:29 -15229.292499] SLOW spr round 2 (radius: 5) [08:00:43 -15229.054706] SLOW spr round 3 (radius: 5) [08:01:57 -15213.886236] SLOW spr round 4 (radius: 5) [08:03:11 -15201.104747] SLOW spr round 5 (radius: 5) [08:04:24 -15201.104741] SLOW spr round 6 (radius: 10) [08:05:45 -15065.159232] SLOW spr round 7 (radius: 5) [08:07:10 -14990.422447] SLOW spr round 8 (radius: 5) [08:08:27 -14929.172188] SLOW spr round 9 (radius: 5) [08:09:40 -14929.171596] SLOW spr round 10 (radius: 10) [08:11:01 -14888.185609] SLOW spr round 11 (radius: 5) [08:12:23 -14866.805730] SLOW spr round 12 (radius: 5) [08:13:39 -14866.788598] SLOW spr round 13 (radius: 10) [08:14:59 -14860.129836] SLOW spr round 14 (radius: 5) [08:16:20 -14859.462866] SLOW spr round 15 (radius: 5) [08:17:35 -14859.460860] SLOW spr round 16 (radius: 10) [08:18:56 -14859.459688] SLOW spr round 17 (radius: 15) [08:20:37 -14819.540044] SLOW spr round 18 (radius: 5) [08:22:01 -14819.539983] SLOW spr round 19 (radius: 10) [08:23:27 -14817.059596] SLOW spr round 20 (radius: 5) [08:24:48 -14815.340885] SLOW spr round 21 (radius: 5) [08:26:02 -14813.899865] SLOW spr round 22 (radius: 5) [08:27:15 -14813.899396] SLOW spr round 23 (radius: 10) [08:28:35 -14812.443173] SLOW spr round 24 (radius: 5) [08:29:55 -14812.289902] SLOW spr round 25 (radius: 5) [08:31:11 -14812.288578] SLOW spr round 26 (radius: 10) [08:32:30 -14812.288494] SLOW spr round 27 (radius: 15) [08:34:10 -14811.698589] SLOW spr round 28 (radius: 5) [08:35:34 -14811.698554] SLOW spr round 29 (radius: 10) [08:36:59 -14811.698546] SLOW spr round 30 (radius: 15) [08:38:38 -14811.698540] SLOW spr round 31 (radius: 20) [08:40:41 -14801.947457] SLOW spr round 32 (radius: 5) [08:42:10 -14768.635822] SLOW spr round 33 (radius: 5) [08:42:36] [worker #1] ML tree search #14, logLikelihood: -14193.842916 [08:43:29 -14768.635663] SLOW spr round 34 (radius: 10) [08:44:49 -14768.635615] SLOW spr round 35 (radius: 15) [08:46:28 -14768.635594] SLOW spr round 36 (radius: 20) [08:48:29 -14768.635593] SLOW spr round 37 (radius: 25) [08:50:54 -14768.635592] Model parameter optimization (eps = 0.100000) [08:51:04] [worker #0] ML tree search #15, logLikelihood: -14768.068452 [08:51:04 -82719.427948] Initial branch length optimization [08:51:05 -60718.322905] Model parameter optimization (eps = 10.000000) [08:51:30 -60547.179011] AUTODETECT spr round 1 (radius: 5) [08:52:52 -39843.036240] AUTODETECT spr round 2 (radius: 10) [08:54:17 -29929.487813] AUTODETECT spr round 3 (radius: 15) [08:55:51 -23644.405401] AUTODETECT spr round 4 (radius: 20) [08:57:31 -21221.211609] AUTODETECT spr round 5 (radius: 25) [08:59:16 -19406.325447] SPR radius for FAST iterations: 25 (autodetect) [08:59:16 -19406.325447] Model parameter optimization (eps = 3.000000) [08:59:34 -19368.303381] FAST spr round 1 (radius: 25) [09:01:08 -16767.769936] FAST spr round 2 (radius: 25) [09:02:28 -16456.936428] FAST spr round 3 (radius: 25) [09:03:46 -16394.802874] FAST spr round 4 (radius: 25) [09:04:59 -16394.796685] Model parameter optimization (eps = 1.000000) [09:05:10 -16392.380139] SLOW spr round 1 (radius: 5) [09:06:24 -16389.735849] SLOW spr round 2 (radius: 5) [09:07:37 -16389.723738] SLOW spr round 3 (radius: 10) [09:08:57 -16378.076055] SLOW spr round 4 (radius: 5) [09:10:21 -16370.225208] SLOW spr round 5 (radius: 5) [09:11:36 -16370.057698] SLOW spr round 6 (radius: 5) [09:12:49 -16370.054964] SLOW spr round 7 (radius: 10) [09:14:07 -16370.053937] SLOW spr round 8 (radius: 15) [09:15:44 -16364.150081] SLOW spr round 9 (radius: 5) [09:17:13 -16316.736380] SLOW spr round 10 (radius: 5) [09:18:34 -15975.213233] SLOW spr round 11 (radius: 5) [09:19:51 -15394.661386] SLOW spr round 12 (radius: 5) [09:21:05 -15226.568752] SLOW spr round 13 (radius: 5) [09:22:20 -15185.847500] SLOW spr round 14 (radius: 5) [09:23:35 -15069.579789] SLOW spr round 15 (radius: 5) [09:24:50 -14952.589092] SLOW spr round 16 (radius: 5) [09:26:05 -14833.757429] SLOW spr round 17 (radius: 5) [09:27:19 -14822.608086] SLOW spr round 18 (radius: 5) [09:28:31 -14816.371223] SLOW spr round 19 (radius: 5) [09:29:42 -14816.371220] SLOW spr round 20 (radius: 10) [09:31:05 -14715.171754] SLOW spr round 21 (radius: 5) [09:32:29 -14633.844659] SLOW spr round 22 (radius: 5) [09:33:47 -14509.851408] SLOW spr round 23 (radius: 5) [09:35:02 -14488.799605] SLOW spr round 24 (radius: 5) [09:36:01] [worker #1] ML tree search #16, logLikelihood: -14531.832138 [09:36:16 -14455.003572] SLOW spr round 25 (radius: 5) [09:37:29 -14451.485269] SLOW spr round 26 (radius: 5) [09:38:41 -14451.485246] SLOW spr round 27 (radius: 10) [09:40:03 -14381.472696] SLOW spr round 28 (radius: 5) [09:41:25 -14356.951427] SLOW spr round 29 (radius: 5) [09:42:40 -14356.951107] SLOW spr round 30 (radius: 10) [09:44:01 -14350.263202] SLOW spr round 31 (radius: 5) [09:45:22 -14344.658916] SLOW spr round 32 (radius: 5) [09:46:37 -14344.657105] SLOW spr round 33 (radius: 10) [09:47:56 -14344.655844] SLOW spr round 34 (radius: 15) [09:49:37 -14238.710706] SLOW spr round 35 (radius: 5) [09:51:04 -14230.012424] SLOW spr round 36 (radius: 5) [09:52:21 -14229.868422] SLOW spr round 37 (radius: 5) [09:53:34 -14229.867422] SLOW spr round 38 (radius: 10) [09:54:53 -14229.866966] SLOW spr round 39 (radius: 15) [09:56:34 -14229.866755] SLOW spr round 40 (radius: 20) [09:58:39 -14228.275343] SLOW spr round 41 (radius: 5) [10:00:06 -14228.273909] SLOW spr round 42 (radius: 10) [10:01:32 -14226.641562] SLOW spr round 43 (radius: 5) [10:02:52 -14226.640230] SLOW spr round 44 (radius: 10) [10:04:12 -14226.639789] SLOW spr round 45 (radius: 15) [10:05:52 -14226.639619] SLOW spr round 46 (radius: 20) [10:07:53 -14226.639551] SLOW spr round 47 (radius: 25) [10:10:16 -14224.896918] SLOW spr round 48 (radius: 5) [10:11:43 -14224.644212] SLOW spr round 49 (radius: 5) [10:13:03 -14223.974379] SLOW spr round 50 (radius: 5) [10:14:17 -14223.973805] SLOW spr round 51 (radius: 10) [10:15:36 -14223.973781] SLOW spr round 52 (radius: 15) [10:17:16 -14223.973778] SLOW spr round 53 (radius: 20) [10:19:19 -14223.973778] SLOW spr round 54 (radius: 25) [10:21:46 -14223.973777] Model parameter optimization (eps = 0.100000) [10:21:58] [worker #0] ML tree search #17, logLikelihood: -14221.385125 [10:21:58 -84245.731441] Initial branch length optimization [10:21:59 -61251.868368] Model parameter optimization (eps = 10.000000) [10:22:21 -61069.830676] AUTODETECT spr round 1 (radius: 5) [10:23:47 -40535.347118] AUTODETECT spr round 2 (radius: 10) [10:25:13 -31026.181552] AUTODETECT spr round 3 (radius: 15) [10:26:46 -25845.955415] AUTODETECT spr round 4 (radius: 20) [10:28:29 -22107.071313] AUTODETECT spr round 5 (radius: 25) [10:30:16 -20841.993053] SPR radius for FAST iterations: 25 (autodetect) [10:30:16 -20841.993053] Model parameter optimization (eps = 3.000000) [10:30:35 -20787.234823] FAST spr round 1 (radius: 25) [10:32:14 -15782.542695] FAST spr round 2 (radius: 25) [10:33:19] [worker #1] ML tree search #18, logLikelihood: -14197.143823 [10:33:38 -14807.759300] FAST spr round 3 (radius: 25) [10:34:59 -14500.868249] FAST spr round 4 (radius: 25) [10:36:19 -14454.108175] FAST spr round 5 (radius: 25) [10:37:37 -14450.234988] FAST spr round 6 (radius: 25) [10:38:53 -14450.234453] Model parameter optimization (eps = 1.000000) [10:39:08 -14448.606594] SLOW spr round 1 (radius: 5) [10:40:22 -14444.448935] SLOW spr round 2 (radius: 5) [10:41:38 -14438.576124] SLOW spr round 3 (radius: 5) [10:42:53 -14425.113179] SLOW spr round 4 (radius: 5) [10:44:06 -14412.030658] SLOW spr round 5 (radius: 5) [10:45:19 -14412.030641] SLOW spr round 6 (radius: 10) [10:46:41 -14362.507699] SLOW spr round 7 (radius: 5) [10:48:05 -14354.851606] SLOW spr round 8 (radius: 5) [10:49:19 -14354.744441] SLOW spr round 9 (radius: 5) [10:50:32 -14354.744376] SLOW spr round 10 (radius: 10) [10:51:51 -14354.744369] SLOW spr round 11 (radius: 15) [10:53:32 -14343.321333] SLOW spr round 12 (radius: 5) [10:54:58 -14343.306749] SLOW spr round 13 (radius: 10) [10:56:22 -14343.306737] SLOW spr round 14 (radius: 15) [10:58:02 -14343.306722] SLOW spr round 15 (radius: 20) [11:00:25 -14308.635661] SLOW spr round 16 (radius: 5) [11:01:55 -14278.387140] SLOW spr round 17 (radius: 5) [11:03:14 -14276.564762] SLOW spr round 18 (radius: 5) [11:04:28 -14272.108242] SLOW spr round 19 (radius: 5) [11:05:40 -14272.108104] SLOW spr round 20 (radius: 10) [11:07:00 -14272.107999] SLOW spr round 21 (radius: 15) [11:08:42 -14271.536328] SLOW spr round 22 (radius: 5) [11:10:07 -14271.536219] SLOW spr round 23 (radius: 10) [11:11:32 -14271.142691] SLOW spr round 24 (radius: 5) [11:12:52 -14271.124647] SLOW spr round 25 (radius: 10) [11:14:12 -14271.124061] SLOW spr round 26 (radius: 15) [11:15:54 -14271.123962] SLOW spr round 27 (radius: 20) [11:18:15 -14271.123945] SLOW spr round 28 (radius: 25) [11:20:59 -14270.918899] SLOW spr round 29 (radius: 5) [11:22:26 -14270.918898] SLOW spr round 30 (radius: 10) [11:23:52 -14270.431386] SLOW spr round 31 (radius: 5) [11:25:12 -14270.431386] SLOW spr round 32 (radius: 10) [11:26:31 -14270.431386] SLOW spr round 33 (radius: 15) [11:28:13 -14270.431386] SLOW spr round 34 (radius: 20) [11:30:33 -14270.431386] SLOW spr round 35 (radius: 25) [11:33:18 -14270.431386] Model parameter optimization (eps = 0.100000) [11:33:26] [worker #0] ML tree search #19, logLikelihood: -14270.289759 [11:42:15] [worker #1] ML tree search #20, logLikelihood: -14149.887892 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.317546,0.317312) (0.225218,0.411977) (0.276609,1.103177) (0.180627,2.775357) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -14122.705021 AIC score: 32207.410043 / AICc score: 7884891.410043 / BIC score: 36999.133287 Free parameters (model + branch lengths): 1981 WARNING: Number of free parameters (K=1981) is larger than alignment size (n=83). This might lead to overfitting and compromise tree inference results! Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/3_mltree/Q06413.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/3_mltree/Q06413.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/3_mltree/Q06413.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/Q06413/3_mltree/Q06413.raxml.log Analysis started: 07-Jul-2021 01:39:40 / finished: 07-Jul-2021 13:21:55 Elapsed time: 42135.814 seconds Consumed energy: 3422.292 Wh (= 17 km in an electric car, or 86 km with an e-scooter!)