RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 03-Jun-2021 00:04:36 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/2_msa/Q02763_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/3_mltree/Q02763 --seed 2 --threads 5 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (5 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/2_msa/Q02763_trimmed_msa.fasta [00:00:00] Loaded alignment with 999 taxa and 271 sites WARNING: Sequences tr_B4QV23_B4QV23_DROSI_7240 and tr_B4IBB0_B4IBB0_DROSE_7238 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_G1N963_G1N963_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_U3IZL3_U3IZL3_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A151NEE9_A0A151NEE9_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A0Q3TWU6_A0A0Q3TWU6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A091IZL2_A0A091IZL2_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A087RFI5_A0A087RFI5_APTFO_9233 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A099ZPW5_A0A099ZPW5_TINGU_94827 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A091G5P3_A0A091G5P3_9AVES_55661 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A0A0A3X8_A0A0A0A3X8_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A2I0M5I8_A0A2I0M5I8_COLLI_8932 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A091I1N2_A0A091I1N2_CALAN_9244 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A1U8DFQ1_A0A1U8DFQ1_ALLSI_38654 are exactly identical! WARNING: Sequences tr_F1NFQ9_F1NFQ9_CHICK_9031 and tr_A0A1V4KY21_A0A1V4KY21_PATFA_372326 are exactly identical! WARNING: Sequences tr_F1NGV4_F1NGV4_CHICK_9031 and tr_G1NBN5_G1NBN5_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1NGV4_F1NGV4_CHICK_9031 and tr_A0A093HJH1_A0A093HJH1_STRCA_441894 are exactly identical! WARNING: Sequences tr_F1NGV4_F1NGV4_CHICK_9031 and tr_A0A226NM03_A0A226NM03_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1NGV4_F1NGV4_CHICK_9031 and tr_A0A226PJ05_A0A226PJ05_COLVI_9014 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_G1MR14_G1MR14_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A151MT35_A0A151MT35_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A091K456_A0A091K456_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A091UKF4_A0A091UKF4_NIPNI_128390 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A087R166_A0A087R166_APTFO_9233 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A093HZ58_A0A093HZ58_STRCA_441894 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A0A0AIM1_A0A0A0AIM1_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A2I0MF50_A0A2I0MF50_COLLI_8932 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A1U7R7D4_A0A1U7R7D4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A1V4KJL4_A0A1V4KJL4_PATFA_372326 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A226NKL3_A0A226NKL3_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1NL49_F1NL49_CHICK_9031 and tr_A0A226NSM9_A0A226NSM9_COLVI_9014 are exactly identical! WARNING: Sequences tr_F1P3S0_F1P3S0_CHICK_9031 and sp_P18460_FGFR3_CHICK_9031 are exactly identical! WARNING: Sequences sp_P21804_FGFR1_CHICK_9031 and tr_A0A151NBT6_A0A151NBT6_ALLMI_8496 are exactly identical! WARNING: Sequences sp_P21804_FGFR1_CHICK_9031 and tr_A0A091VEL8_A0A091VEL8_NIPNI_128390 are exactly identical! WARNING: Sequences sp_P21804_FGFR1_CHICK_9031 and tr_A0A091FPL7_A0A091FPL7_9AVES_55661 are exactly identical! WARNING: Sequences sp_P21804_FGFR1_CHICK_9031 and tr_A0A3Q0GLX8_A0A3Q0GLX8_ALLSI_38654 are exactly identical! WARNING: Sequences sp_P21804_FGFR1_CHICK_9031 and tr_A0A226N5G5_A0A226N5G5_CALSU_9009 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_G3RBC6_G3RBC6_GORGO_9595 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_H2PQ36_H2PQ36_PONAB_9601 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_G1SL66_G1SL66_RABIT_9986 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_E2R186_E2R186_CANLF_9615 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2I3RMA9_A0A2I3RMA9_PANTR_9598 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_F6V0E6_F6V0E6_HORSE_9796 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_W5NU11_W5NU11_SHEEP_9940 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_H0V817_H0V817_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and sp_P11362_FGFR1_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_G5B0B1_G5B0B1_HETGA_10181 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_G3TKE5_G3TKE5_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_F6YNK3_F6YNK3_CALJA_9483 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_G1MAQ3_G1MAQ3_AILME_9646 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_G7PD75_G7PD75_MACFA_9541 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A4IFL5_A4IFL5_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_L5KB29_L5KB29_PTEAL_9402 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2I2UK29_A0A2I2UK29_FELCA_9685 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A096MT31_A0A096MT31_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A1S3FZR2_A0A1S3FZR2_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2K5NV80_A0A2K5NV80_CERAT_9531 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2K6C8X2_A0A2K6C8X2_MACNE_9545 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2R9AGY9_A0A2R9AGY9_PANPA_9597 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2Y9DZH7_A0A2Y9DZH7_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2Y9N6B4_A0A2Y9N6B4_DELLE_9749 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A2Y9TAF5_A0A2Y9TAF5_PHYCD_9755 are exactly identical! WARNING: Sequences sp_P16092_FGFR1_MOUSE_10090 and tr_A0A383ZTK5_A0A383ZTK5_BALAS_310752 are exactly identical! WARNING: Sequences sp_P21803_FGFR2_MOUSE_10090 and tr_F1LSG7_F1LSG7_RAT_10116 are exactly identical! WARNING: Sequences sp_Q02858_TIE2_MOUSE_10090 and tr_F6TEV1_F6TEV1_MONDO_13616 are exactly identical! WARNING: Sequences sp_Q02858_TIE2_MOUSE_10090 and tr_D3ZCD0_D3ZCD0_RAT_10116 are exactly identical! WARNING: Sequences sp_Q02858_TIE2_MOUSE_10090 and tr_F6XN02_F6XN02_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q02858_TIE2_MOUSE_10090 and tr_A0A1S3FJS6_A0A1S3FJS6_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_M3YQQ1_M3YQQ1_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_G1SWA2_G1SWA2_RABIT_9986 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_E2QXM1_E2QXM1_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_W5QH49_W5QH49_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_B5DFD6_B5DFD6_RAT_10116 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_H0WLA1_H0WLA1_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_F1SFD1_F1SFD1_PIG_9823 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_G1L4M1_G1L4M1_AILME_9646 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_F1MX81_F1MX81_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_A0A1S3WFZ8_A0A1S3WFZ8_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_A0A1U7TR77_A0A1U7TR77_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_A0A2U3VYW6_A0A2U3VYW6_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_A0A2Y9J4I3_A0A2Y9J4I3_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_A0A2Y9NAC1_A0A2Y9NAC1_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_A0A2Y9SRH3_A0A2Y9SRH3_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q06806_TIE1_MOUSE_10090 and tr_A0A383YPR7_A0A383YPR7_BALAS_310752 are exactly identical! WARNING: Sequences tr_M3XV59_M3XV59_MUSPF_9669 and tr_A0A2Y9J1Y5_A0A2Y9J1Y5_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3XV59_M3XV59_MUSPF_9669 and tr_A0A2Y9J341_A0A2Y9J341_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YE16_M3YE16_MUSPF_9669 and tr_G1NWC0_G1NWC0_MYOLU_59463 are exactly identical! WARNING: Sequences tr_M3YE16_M3YE16_MUSPF_9669 and tr_A0A2U3VI28_A0A2U3VI28_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YE16_M3YE16_MUSPF_9669 and tr_A0A2U3YCP8_A0A2U3YCP8_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YE16_M3YE16_MUSPF_9669 and tr_A0A2Y9J985_A0A2Y9J985_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YI08_M3YI08_MUSPF_9669 and tr_A0A2Y9JQG0_A0A2Y9JQG0_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_G1S2P7_G1S2P7_NOMLE_61853 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_G1PDN9_G1PDN9_MYOLU_59463 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_G3RIN5_G3RIN5_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_G1TE63_G1TE63_RABIT_9986 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_F1P8U6_F1P8U6_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2I3RZH3_A0A2I3RZH3_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_F6WQ81_F6WQ81_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_W5PYW6_W5PYW6_SHEEP_9940 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A287DAL9_A0A287DAL9_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and sp_Q02763_TIE2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_G3T455_G3T455_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_K7GLN0_K7GLN0_PIG_9823 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_G1L4T4_G1L4T4_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and sp_Q06807_TIE2_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_M3X412_M3X412_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A1S3WST0_A0A1S3WST0_ERIEU_9365 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A1U7T6J8_A0A1U7T6J8_TARSY_1868482 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2R9AYN0_A0A2R9AYN0_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2U3X3V2_A0A2U3X3V2_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2U3Y080_A0A2U3Y080_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2Y9S0P2_A0A2Y9S0P2_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2Y9KVZ6_A0A2Y9KVZ6_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2Y9LPU5_A0A2Y9LPU5_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A2Y9ETZ2_A0A2Y9ETZ2_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A384CER1_A0A384CER1_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YWW8_M3YWW8_MUSPF_9669 and tr_A0A383ZP53_A0A383ZP53_BALAS_310752 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_G3R075_G3R075_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_H2N7Q2_H2N7Q2_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_H2PYU7_H2PYU7_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and sp_P35590_TIE1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_G7MGE5_G7MGE5_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_F7EE61_F7EE61_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_G7NUW7_G7NUW7_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_A0A096MY61_A0A096MY61_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_A0A0D9S7J5_A0A0D9S7J5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_A0A2K5KP22_A0A2K5KP22_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_A0A2K5YLL9_A0A2K5YLL9_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1RSH5_G1RSH5_NOMLE_61853 and tr_A0A2R9BKS1_A0A2R9BKS1_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_G3QLZ3_G3QLZ3_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_H2NA70_H2NA70_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_H2Q1T9_H2Q1T9_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_H0X4E9_H0X4E9_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_F6S7W7_F6S7W7_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_A0A096P476_A0A096P476_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_A0A0D9REZ9_A0A0D9REZ9_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_A0A2K5MKU6_A0A2K5MKU6_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_A0A2K6CCS4_A0A2K6CCS4_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_A0A2K5YH45_A0A2K5YH45_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1S142_G1S142_NOMLE_61853 and tr_A0A2R9B0Q5_A0A2R9B0Q5_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3H1K2_G3H1K2_CRIGR_10029 and tr_A0A1U8BJ90_A0A1U8BJ90_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_G3QZ51_G3QZ51_GORGO_9595 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_H2NBT5_H2NBT5_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_F1Q2E3_F1Q2E3_CANLF_9615 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_H2Q2P3_H2Q2P3_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_F7C9J5_F7C9J5_HORSE_9796 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_H0X6E4_H0X6E4_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A286XNN2_A0A286XNN2_CAVPO_10141 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and sp_P21802_FGFR2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A1D5QYN7_A0A1D5QYN7_MACMU_9544 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_G5B5S0_G5B5S0_HETGA_10181 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2R8NE54_A0A2R8NE54_CALJA_9483 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_K7GQY0_K7GQY0_PIG_9823 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_G1LX56_G1LX56_AILME_9646 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_G7PE88_G7PE88_MACFA_9541 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2I3LIL7_A0A2I3LIL7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A091DH98_A0A091DH98_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A0D9QXC2_A0A0D9QXC2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A1S3FN18_A0A1S3FN18_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A3Q0DP04_A0A3Q0DP04_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A3Q0CTT9_A0A3Q0CTT9_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2K5MTR7_A0A2K5MTR7_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2K6DJ09_A0A2K6DJ09_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2K5XUY7_A0A2K5XUY7_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2R9B2V2_A0A2R9B2V2_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2U3ZJB4_A0A2U3ZJB4_ODORO_9708 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2U3Y5B6_A0A2U3Y5B6_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2Y9MQL8_A0A2Y9MQL8_DELLE_9749 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A2Y9EWX8_A0A2Y9EWX8_PHYCD_9755 are exactly identical! WARNING: Sequences tr_G3IJY0_G3IJY0_CRIGR_10029 and tr_A0A384BMS7_A0A384BMS7_URSMA_29073 are exactly identical! WARNING: Sequences tr_G3RPD8_G3RPD8_GORGO_9595 and sp_P22455_FGFR4_HUMAN_9606 are exactly identical! WARNING: Sequences tr_B5DX82_B5DX82_DROPS_46245 and tr_Q293W0_Q293W0_DROPS_46245 are exactly identical! WARNING: Sequences tr_B5DX82_B5DX82_DROPS_46245 and tr_B4GLK1_B4GLK1_DROPE_7234 are exactly identical! WARNING: Sequences tr_F1P9Z7_F1P9Z7_CANLF_9615 and tr_A0A2U3VMK7_A0A2U3VMK7_ODORO_9708 are exactly identical! WARNING: Sequences tr_F1P9Z7_F1P9Z7_CANLF_9615 and tr_A0A2U3XZ10_A0A2U3XZ10_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F1PLF6_F1PLF6_CANLF_9615 and tr_G1MES8_G1MES8_AILME_9646 are exactly identical! WARNING: Sequences tr_F1PLF6_F1PLF6_CANLF_9615 and tr_M3WI08_M3WI08_FELCA_9685 are exactly identical! WARNING: Sequences tr_F1PLF6_F1PLF6_CANLF_9615 and tr_A0A2U3ZQJ6_A0A2U3ZQJ6_ODORO_9708 are exactly identical! WARNING: Sequences tr_F1PLF6_F1PLF6_CANLF_9615 and tr_A0A384CID3_A0A384CID3_URSMA_29073 are exactly identical! WARNING: Sequences tr_F6XBX5_F6XBX5_CANLF_9615 and tr_F6WLS1_F6WLS1_HORSE_9796 are exactly identical! WARNING: Sequences tr_F6XBX5_F6XBX5_CANLF_9615 and tr_I3LWL9_I3LWL9_ICTTR_43179 are exactly identical! WARNING: Sequences tr_F6XBX5_F6XBX5_CANLF_9615 and tr_A0A337SQY0_A0A337SQY0_FELCA_9685 are exactly identical! WARNING: Sequences tr_F6XBX5_F6XBX5_CANLF_9615 and tr_A0A2U3XP14_A0A2U3XP14_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A2I3TIS1_A0A2I3TIS1_PANTR_9598 and sp_P22607_FGFR3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I3TIS1_A0A2I3TIS1_PANTR_9598 and tr_F7FZS3_F7FZS3_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I3TIS1_A0A2I3TIS1_PANTR_9598 and tr_G7NWP0_G7NWP0_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I3TIS1_A0A2I3TIS1_PANTR_9598 and tr_A0A0D9RSZ2_A0A0D9RSZ2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I3TIS1_A0A2I3TIS1_PANTR_9598 and tr_A0A2K6DYA5_A0A2K6DYA5_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I3TIS1_A0A2I3TIS1_PANTR_9598 and tr_A0A2K5YBJ5_A0A2K5YBJ5_MANLE_9568 are exactly identical! WARNING: Sequences tr_F6TEU5_F6TEU5_MONDO_13616 and tr_G3W7D2_G3W7D2_SARHA_9305 are exactly identical! WARNING: Sequences tr_F6TVE0_F6TVE0_MONDO_13616 and tr_G3WZH5_G3WZH5_SARHA_9305 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_G3VVF1_G3VVF1_SARHA_9305 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_U3IX50_U3IX50_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_A0A091JPD9_A0A091JPD9_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_A0A093SQ86_A0A093SQ86_9PASS_328815 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_A0A093HT31_A0A093HT31_STRCA_441894 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_A0A099YV15_A0A099YV15_TINGU_94827 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_A0A0A0A9F2_A0A0A0A9F2_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_A0A093FY96_A0A093FY96_DRYPU_118200 are exactly identical! WARNING: Sequences tr_F7DHF8_F7DHF8_MONDO_13616 and tr_A0A091HWJ6_A0A091HWJ6_CALAN_9244 are exactly identical! WARNING: Sequences tr_W5P015_W5P015_SHEEP_9940 and tr_F1MN51_F1MN51_BOVIN_9913 are exactly identical! WARNING: Sequences tr_W5P015_W5P015_SHEEP_9940 and tr_A0A2Y9MM49_A0A2Y9MM49_DELLE_9749 are exactly identical! WARNING: Sequences tr_W5P015_W5P015_SHEEP_9940 and tr_A0A2Y9EJM5_A0A2Y9EJM5_PHYCD_9755 are exactly identical! WARNING: Sequences tr_W5P5S2_W5P5S2_SHEEP_9940 and tr_F1MNW2_F1MNW2_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A3B5QPU4_A0A3B5QPU4_XIPMA_8083 and tr_A0A096LZ19_A0A096LZ19_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5QPU4_A0A3B5QPU4_XIPMA_8083 and tr_A0A2I4BHP3_A0A2I4BHP3_9TELE_52670 are exactly identical! WARNING: Sequences tr_M4A526_M4A526_XIPMA_8083 and tr_A0A087YMN4_A0A087YMN4_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AA29_M4AA29_XIPMA_8083 and tr_A0A087XJX5_A0A087XJX5_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4APU6_M4APU6_XIPMA_8083 and tr_A0A087XIA2_A0A087XIA2_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A087ZPD1_A0A087ZPD1_APIME_7460 and tr_A0A2A3EJ15_A0A2A3EJ15_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A087ZYI2_A0A087ZYI2_APIME_7460 and tr_A0A2A3EB16_A0A2A3EB16_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NUN4_A0A158NUN4_ATTCE_12957 and tr_A0A151WUN4_A0A151WUN4_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NUN4_A0A158NUN4_ATTCE_12957 and tr_A0A195DRY7_A0A195DRY7_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NUN4_A0A158NUN4_ATTCE_12957 and tr_A0A195BS65_A0A195BS65_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NUN4_A0A158NUN4_ATTCE_12957 and tr_A0A195EXB4_A0A195EXB4_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A158NUN4_A0A158NUN4_ATTCE_12957 and tr_A0A195C8Y0_A0A195C8Y0_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A158NVU7_A0A158NVU7_ATTCE_12957 and tr_A0A195BB67_A0A195BB67_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NW15_A0A158NW15_ATTCE_12957 and tr_A0A151JVS6_A0A151JVS6_9HYME_34720 are exactly identical! WARNING: Sequences tr_H0V6Z2_H0V6Z2_CAVPO_10141 and tr_A0A1S3F6X6_A0A1S3F6X6_DIPOR_10020 are exactly identical! WARNING: Sequences tr_H0V6Z2_H0V6Z2_CAVPO_10141 and tr_A0A1U8CSX1_A0A1U8CSX1_MESAU_10036 are exactly identical! WARNING: Sequences tr_H0VFN6_H0VFN6_CAVPO_10141 and tr_A0A091DP55_A0A091DP55_FUKDA_885580 are exactly identical! WARNING: Sequences tr_F6VW12_F6VW12_MACMU_9544 and tr_G7PS68_G7PS68_MACFA_9541 are exactly identical! WARNING: Sequences tr_F6VW12_F6VW12_MACMU_9544 and tr_A0A096P1E5_A0A096P1E5_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6VW12_F6VW12_MACMU_9544 and tr_A0A0D9RBN2_A0A0D9RBN2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F6VW12_F6VW12_MACMU_9544 and tr_A0A2K5M468_A0A2K5M468_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6VW12_F6VW12_MACMU_9544 and tr_A0A2K6CQG2_A0A2K6CQG2_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6VW12_F6VW12_MACMU_9544 and tr_A0A2K5ZN87_A0A2K5ZN87_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q26614_FGFR_STRPU_7668 and tr_W4YXV6_W4YXV6_STRPU_7668 are exactly identical! WARNING: Sequences tr_G3TS45_G3TS45_LOXAF_9785 and tr_A0A2Y9REP9_A0A2Y9REP9_TRIMA_127582 are exactly identical! WARNING: Sequences tr_H0YRT1_H0YRT1_TAEGU_59729 and tr_A0A091IRN3_A0A091IRN3_EGRGA_188379 are exactly identical! WARNING: Sequences tr_H0YRT1_H0YRT1_TAEGU_59729 and tr_A0A093S7K6_A0A093S7K6_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0YRT1_H0YRT1_TAEGU_59729 and tr_A0A093HFE4_A0A093HFE4_STRCA_441894 are exactly identical! WARNING: Sequences tr_H0YRT1_H0YRT1_TAEGU_59729 and tr_A0A218UUL2_A0A218UUL2_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0YT27_H0YT27_TAEGU_59729 and tr_A0A218UKB3_A0A218UKB3_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0Z3I3_H0Z3I3_TAEGU_59729 and tr_A0A091E9I6_A0A091E9I6_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0Z3I3_H0Z3I3_TAEGU_59729 and tr_A0A218UJD4_A0A218UJD4_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0Z7B3_H0Z7B3_TAEGU_59729 and tr_A0A218UTR5_A0A218UTR5_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A091EB70_A0A091EB70_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A091JI37_A0A091JI37_EGRGA_188379 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A093PPX3_A0A093PPX3_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A091WR17_A0A091WR17_NIPNI_128390 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A087RDZ5_A0A087RDZ5_APTFO_9233 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A093I584_A0A093I584_STRCA_441894 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A091W6X5_A0A091W6X5_OPIHO_30419 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A099ZFA7_A0A099ZFA7_TINGU_94827 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A0A0AE48_A0A0A0AE48_CHAVO_50402 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A2I0MMC5_A0A2I0MMC5_COLLI_8932 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A1V4JF19_A0A1V4JF19_PATFA_372326 are exactly identical! WARNING: Sequences tr_H0ZK19_H0ZK19_TAEGU_59729 and tr_A0A218V8P1_A0A218V8P1_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0ZLZ4_H0ZLZ4_TAEGU_59729 and tr_U3JHI1_U3JHI1_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0ZLZ4_H0ZLZ4_TAEGU_59729 and tr_A0A091FAG1_A0A091FAG1_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0ZLZ4_H0ZLZ4_TAEGU_59729 and tr_A0A218URJ2_A0A218URJ2_9PASE_299123 are exactly identical! WARNING: Sequences tr_G1MIQ6_G1MIQ6_AILME_9646 and tr_A0A384C6V6_A0A384C6V6_URSMA_29073 are exactly identical! WARNING: Sequences tr_U3JSW5_U3JSW5_FICAL_59894 and tr_A0A091VD30_A0A091VD30_NIPNI_128390 are exactly identical! WARNING: Sequences tr_U3JSW5_U3JSW5_FICAL_59894 and tr_A0A093GGY9_A0A093GGY9_DRYPU_118200 are exactly identical! WARNING: Sequences tr_U3JSW5_U3JSW5_FICAL_59894 and tr_A0A1V4JXD1_A0A1V4JXD1_PATFA_372326 are exactly identical! WARNING: Sequences tr_U3JSW5_U3JSW5_FICAL_59894 and tr_A0A218VEK5_A0A218VEK5_9PASE_299123 are exactly identical! WARNING: Sequences tr_U3JWM3_U3JWM3_FICAL_59894 and tr_A0A091F9U6_A0A091F9U6_CORBR_85066 are exactly identical! WARNING: Sequences tr_U3K223_U3K223_FICAL_59894 and tr_A0A091EFX6_A0A091EFX6_CORBR_85066 are exactly identical! WARNING: Sequences tr_U3K223_U3K223_FICAL_59894 and tr_A0A091JBK6_A0A091JBK6_EGRGA_188379 are exactly identical! WARNING: Sequences tr_U3K223_U3K223_FICAL_59894 and tr_A0A091VQV7_A0A091VQV7_NIPNI_128390 are exactly identical! WARNING: Sequences tr_U3K223_U3K223_FICAL_59894 and tr_A0A091GHK8_A0A091GHK8_9AVES_55661 are exactly identical! WARNING: Sequences tr_U3K223_U3K223_FICAL_59894 and tr_A0A099ZY12_A0A099ZY12_CHAVO_50402 are exactly identical! WARNING: Sequences tr_U3IA91_U3IA91_ANAPL_8839 and tr_A0A091WFB4_A0A091WFB4_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A044TPB0_A0A044TPB0_ONCVO_6282 and tr_A0A182E3L9_A0A182E3L9_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A096N6L3_A0A096N6L3_PAPAN_9555 and tr_A0A0D9R9A7_A0A0D9R9A7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096N6L3_A0A096N6L3_PAPAN_9555 and tr_A0A2K5MWJ4_A0A2K5MWJ4_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096N6L3_A0A096N6L3_PAPAN_9555 and tr_A0A2K5XX73_A0A2K5XX73_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0K0EGW0_A0A0K0EGW0_STRER_6248 and tr_A0A090LT51_A0A090LT51_STRRB_34506 are exactly identical! WARNING: Sequences tr_A0A151P9D5_A0A151P9D5_ALLMI_8496 and tr_A0A3Q0GKJ3_A0A3Q0GKJ3_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A194QZK6_A0A194QZK6_PAPMA_76193 and tr_A0A194QDK7_A0A194QDK7_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A2I0LK09_A0A2I0LK09_COLLI_8932 and tr_A0A1V4KU49_A0A1V4KU49_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0V0SFD3_A0A0V0SFD3_9BILA_6336 and tr_A0A0V0VY18_A0A0V0VY18_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0SFD3_A0A0V0SFD3_9BILA_6336 and tr_A0A0V1KPK4_A0A0V1KPK4_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0SFD3_A0A0V0SFD3_9BILA_6336 and tr_A0A0V1AB88_A0A0V1AB88_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V0SFD3_A0A0V0SFD3_9BILA_6336 and tr_A0A0V1NPE9_A0A0V1NPE9_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0SFD3_A0A0V0SFD3_9BILA_6336 and tr_A0A0V0TBE8_A0A0V0TBE8_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V1N5R0_A0A0V1N5R0_9BILA_268474 and tr_A0A0V1I8W2_A0A0V1I8W2_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A151X5M3_A0A151X5M3_9HYME_64791 and tr_A0A195D1L0_A0A195D1L0_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A1S3NJQ6_A0A1S3NJQ6_SALSA_8030 and tr_A0A1S3PJ26_A0A1S3PJ26_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3NJQ6_A0A1S3NJQ6_SALSA_8030 and tr_A0A060VNI8_A0A060VNI8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NJQ6_A0A1S3NJQ6_SALSA_8030 and tr_A0A060YLT1_A0A060YLT1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3RKB4_A0A1S3RKB4_SALSA_8030 and tr_A0A060WSU2_A0A060WSU2_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3RRC1_A0A1S3RRC1_SALSA_8030 and tr_A0A060W928_A0A060W928_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1I7V385_A0A1I7V385_9PELO_1561998 and tr_A0A1I7V386_A0A1I7V386_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A0A2D0QM04_A0A2D0QM04_ICTPU_7998 and tr_A0A2D0QMB0_A0A2D0QMB0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QM04_A0A2D0QM04_ICTPU_7998 and tr_A0A2D0QQ00_A0A2D0QQ00_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QNJ8_A0A2D0QNJ8_ICTPU_7998 and tr_A0A2D0QNK2_A0A2D0QNK2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QNJ8_A0A2D0QNJ8_ICTPU_7998 and tr_A0A2D0QNT3_A0A2D0QNT3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QNJ8_A0A2D0QNJ8_ICTPU_7998 and tr_A0A2D0QP27_A0A2D0QP27_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QNJ8_A0A2D0QNJ8_ICTPU_7998 and tr_A0A2D0QP33_A0A2D0QP33_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QNJ8_A0A2D0QNJ8_ICTPU_7998 and tr_A0A2D0QQR3_A0A2D0QQR3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QNJ8_A0A2D0QNJ8_ICTPU_7998 and tr_A0A2D0QRF5_A0A2D0QRF5_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QXM7_A0A2D0QXM7_ICTPU_7998 and tr_A0A2D0QXX4_A0A2D0QXX4_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0QXM7_A0A2D0QXM7_ICTPU_7998 and tr_A0A2D0QZH2_A0A2D0QZH2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0T1D5_A0A2D0T1D5_ICTPU_7998 and tr_W5UG95_W5UG95_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U4BDU6_A0A2U4BDU6_TURTR_9739 and tr_A0A2Y9S6H6_A0A2Y9S6H6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4BDU6_A0A2U4BDU6_TURTR_9739 and tr_A0A383Z756_A0A383Z756_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2Y9LM79_A0A2Y9LM79_DELLE_9749 and tr_A0A2Y9S9A4_A0A2Y9S9A4_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 298 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/3_mltree/Q02763.raxml.reduced.phy Alignment comprises 1 partitions and 271 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 271 / 271 Gaps: 1.75 % Invariant sites: 1.85 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/3_mltree/Q02763.raxml.rba Parallelization scheme autoconfig: 5 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 999 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 271 / 21680 [00:00:00] Data distribution: max. searches per worker: 4 Starting ML tree search with 20 distinct starting trees [00:00:00 -368856.118047] Initial branch length optimization [00:00:06 -292309.230934] Model parameter optimization (eps = 10.000000) [00:01:11 -291781.817777] AUTODETECT spr round 1 (radius: 5) [00:05:11 -191336.178159] AUTODETECT spr round 2 (radius: 10) [00:09:28 -135072.196520] AUTODETECT spr round 3 (radius: 15) [00:13:47 -111890.702264] AUTODETECT spr round 4 (radius: 20) [00:18:52 -97834.008890] AUTODETECT spr round 5 (radius: 25) [00:24:43 -91012.668346] SPR radius for FAST iterations: 25 (autodetect) [00:24:43 -91012.668346] Model parameter optimization (eps = 3.000000) [00:25:17 -90896.375092] FAST spr round 1 (radius: 25) [00:29:14 -75314.177723] FAST spr round 2 (radius: 25) [00:32:09 -74165.869195] FAST spr round 3 (radius: 25) [00:34:47 -74119.878369] FAST spr round 4 (radius: 25) [00:37:10 -74117.500774] FAST spr round 5 (radius: 25) [00:39:26 -74117.500540] Model parameter optimization (eps = 1.000000) [00:39:42 -74115.518097] SLOW spr round 1 (radius: 5) [00:42:33 -74094.138470] SLOW spr round 2 (radius: 5) [00:45:26 -74089.683833] SLOW spr round 3 (radius: 5) [00:48:20 -74087.902567] SLOW spr round 4 (radius: 5) [00:51:13 -74087.902290] SLOW spr round 5 (radius: 10) [00:54:28 -74085.049397] SLOW spr round 6 (radius: 5) [00:58:05 -74085.049228] SLOW spr round 7 (radius: 10) [01:01:31 -74085.049151] SLOW spr round 8 (radius: 15) [01:06:13 -74085.049151] SLOW spr round 9 (radius: 20) [01:13:54 -74085.049151] SLOW spr round 10 (radius: 25) [01:15:20] [worker #2] ML tree search #3, logLikelihood: -74097.239265 [01:15:29] [worker #1] ML tree search #2, logLikelihood: -74095.505207 [01:17:52] [worker #4] ML tree search #5, logLikelihood: -74088.687524 [01:20:29] [worker #3] ML tree search #4, logLikelihood: -74080.670750 [01:24:23 -74085.049151] Model parameter optimization (eps = 0.100000) [01:24:38] [worker #0] ML tree search #1, logLikelihood: -74084.596771 [01:24:39 -367479.960298] Initial branch length optimization [01:24:45 -290746.608852] Model parameter optimization (eps = 10.000000) [01:25:39 -290200.370609] AUTODETECT spr round 1 (radius: 5) [01:29:42 -191577.531009] AUTODETECT spr round 2 (radius: 10) [01:34:04 -140133.327563] AUTODETECT spr round 3 (radius: 15) [01:38:30 -108609.739576] AUTODETECT spr round 4 (radius: 20) [01:43:39 -90430.059677] AUTODETECT spr round 5 (radius: 25) [01:49:58 -87576.417838] SPR radius for FAST iterations: 25 (autodetect) [01:49:58 -87576.417838] Model parameter optimization (eps = 3.000000) [01:50:29 -87485.794146] FAST spr round 1 (radius: 25) [01:54:21 -74651.202653] FAST spr round 2 (radius: 25) [01:57:24 -74166.979351] FAST spr round 3 (radius: 25) [02:00:08 -74124.536884] FAST spr round 4 (radius: 25) [02:02:37 -74109.644936] FAST spr round 5 (radius: 25) [02:04:57 -74109.644667] Model parameter optimization (eps = 1.000000) [02:05:15 -74106.895298] SLOW spr round 1 (radius: 5) [02:08:07 -74093.282527] SLOW spr round 2 (radius: 5) [02:10:57 -74092.982123] SLOW spr round 3 (radius: 5) [02:13:41 -74092.982075] SLOW spr round 4 (radius: 10) [02:16:50 -74092.978990] SLOW spr round 5 (radius: 15) [02:21:36 -74092.978978] SLOW spr round 6 (radius: 20) [02:29:30 -74092.978974] SLOW spr round 7 (radius: 25) [02:29:47] [worker #1] ML tree search #7, logLikelihood: -74085.658429 [02:39:46 -74092.978973] Model parameter optimization (eps = 0.100000) [02:39:55] [worker #0] ML tree search #6, logLikelihood: -74092.929753 [02:39:55 -363359.020560] Initial branch length optimization [02:40:00 -290406.491507] Model parameter optimization (eps = 10.000000) [02:41:07 -290048.892257] AUTODETECT spr round 1 (radius: 5) [02:45:14 -187176.497858] AUTODETECT spr round 2 (radius: 10) [02:49:35 -143184.242001] AUTODETECT spr round 3 (radius: 15) [02:53:31] [worker #4] ML tree search #10, logLikelihood: -74086.476352 [02:53:49 -119053.482659] AUTODETECT spr round 4 (radius: 20) [02:59:30 -94947.191571] AUTODETECT spr round 5 (radius: 25) [03:06:30 -86450.156492] SPR radius for FAST iterations: 25 (autodetect) [03:06:30 -86450.156492] Model parameter optimization (eps = 3.000000) [03:07:00 -86337.586157] FAST spr round 1 (radius: 25) [03:07:29] [worker #3] ML tree search #9, logLikelihood: -74084.932327 [03:11:10 -74567.399766] FAST spr round 2 (radius: 25) [03:14:14 -74159.038795] FAST spr round 3 (radius: 25) [03:16:56 -74125.362409] FAST spr round 4 (radius: 25) [03:19:16 -74118.724417] FAST spr round 5 (radius: 25) [03:20:19] [worker #2] ML tree search #8, logLikelihood: -74077.470902 [03:21:39 -74116.331456] FAST spr round 6 (radius: 25) [03:23:55 -74110.968158] FAST spr round 7 (radius: 25) [03:26:08 -74110.968106] Model parameter optimization (eps = 1.000000) [03:26:22 -74109.871515] SLOW spr round 1 (radius: 5) [03:29:20 -74091.836860] SLOW spr round 2 (radius: 5) [03:32:02 -74091.414381] SLOW spr round 3 (radius: 5) [03:34:44 -74091.413457] SLOW spr round 4 (radius: 10) [03:37:51 -74091.181529] SLOW spr round 5 (radius: 5) [03:41:25 -74089.461752] SLOW spr round 6 (radius: 5) [03:44:28] [worker #1] ML tree search #12, logLikelihood: -74082.934241 [03:44:35 -74088.626307] SLOW spr round 7 (radius: 5) [03:47:32 -74088.103007] SLOW spr round 8 (radius: 5) [03:50:22 -74088.076797] SLOW spr round 9 (radius: 10) [03:53:30 -74088.076679] SLOW spr round 10 (radius: 15) [03:58:30 -74088.076670] SLOW spr round 11 (radius: 20) [04:06:58 -74088.076661] SLOW spr round 12 (radius: 25) [04:15:40] [worker #4] ML tree search #15, logLikelihood: -74095.645098 [04:18:37 -74088.076653] Model parameter optimization (eps = 0.100000) [04:18:53] [worker #0] ML tree search #11, logLikelihood: -74087.323969 [04:18:53 -366096.627992] Initial branch length optimization [04:19:00 -290204.344388] Model parameter optimization (eps = 10.000000) [04:19:59 -289677.822208] AUTODETECT spr round 1 (radius: 5) [04:23:58 -190214.934850] AUTODETECT spr round 2 (radius: 10) [04:25:14] [worker #3] ML tree search #14, logLikelihood: -74096.449328 [04:28:30 -131506.642796] AUTODETECT spr round 3 (radius: 15) [04:32:54 -95691.060050] AUTODETECT spr round 4 (radius: 20) [04:37:22 -87120.544841] AUTODETECT spr round 5 (radius: 25) [04:37:30] [worker #2] ML tree search #13, logLikelihood: -74096.244252 [04:43:26 -84363.982354] SPR radius for FAST iterations: 25 (autodetect) [04:43:26 -84363.982354] Model parameter optimization (eps = 3.000000) [04:43:55 -84280.816604] FAST spr round 1 (radius: 25) [04:47:33 -74409.912912] FAST spr round 2 (radius: 25) [04:50:23 -74138.671536] FAST spr round 3 (radius: 25) [04:53:01 -74121.407788] FAST spr round 4 (radius: 25) [04:55:20 -74121.369488] Model parameter optimization (eps = 1.000000) [04:55:34 -74120.472349] SLOW spr round 1 (radius: 5) [04:58:30 -74089.173775] SLOW spr round 2 (radius: 5) [05:01:22 -74082.127135] SLOW spr round 3 (radius: 5) [05:04:15 -74081.178752] SLOW spr round 4 (radius: 5) [05:07:06 -74081.178391] SLOW spr round 5 (radius: 10) [05:10:21 -74081.178225] SLOW spr round 6 (radius: 15) [05:10:22] [worker #1] ML tree search #17, logLikelihood: -74094.534414 [05:15:09 -74081.178060] SLOW spr round 7 (radius: 20) [05:22:53 -74081.178060] SLOW spr round 8 (radius: 25) [05:31:40] [worker #4] ML tree search #20, logLikelihood: -74100.811286 [05:33:33 -74081.178060] Model parameter optimization (eps = 0.100000) [05:33:44] [worker #0] ML tree search #16, logLikelihood: -74080.958072 [05:40:18] [worker #3] ML tree search #19, logLikelihood: -74095.146186 [06:09:57] [worker #2] ML tree search #18, logLikelihood: -74089.592576 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.179231,0.345750) (0.298160,0.420299) (0.312469,1.053500) (0.210141,2.300974) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -74077.470902 AIC score: 152156.941803 / AICc score: 8164160.941803 / BIC score: 159364.781564 Free parameters (model + branch lengths): 2001 WARNING: Number of free parameters (K=2001) is larger than alignment size (n=271). This might lead to overfitting and compromise tree inference results! Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/3_mltree/Q02763.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/3_mltree/Q02763.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/3_mltree/Q02763.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/Q02763/3_mltree/Q02763.raxml.log Analysis started: 03-Jun-2021 00:04:36 / finished: 03-Jun-2021 06:14:33 Elapsed time: 22197.588 seconds Consumed energy: 1232.177 Wh (= 6 km in an electric car, or 31 km with an e-scooter!)