RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 17-Jul-2021 07:21:38 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/2_msa/P61981_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/3_mltree/P61981.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/4_raxmlng_ancestral/P61981 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626495698 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/2_msa/P61981_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 247 sites WARNING: Sequences tr_E9H1W5_E9H1W5_DAPPU_6669 and tr_A0A0P6A896_A0A0P6A896_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E9H8M4_E9H8M4_DAPPU_6669 and tr_A0A0P4YC34_A0A0P4YC34_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E2ADN2_E2ADN2_CAMFO_104421 and tr_A0A158NR27_A0A158NR27_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2ADN2_E2ADN2_CAMFO_104421 and tr_F4WPA6_F4WPA6_ACREC_103372 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and sp_P61982_1433G_MOUSE_10090 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_M3YX27_M3YX27_MUSPF_9669 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_G1PSV7_G1PSV7_MYOLU_59463 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and sp_Q5RC20_1433G_PONAB_9601 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_H2QUT2_H2QUT2_PANTR_9598 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and sp_P61983_1433G_RAT_10116 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_H0XKR5_H0XKR5_OTOGA_30611 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and sp_P61981_1433G_HUMAN_9606 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_F6XLR8_F6XLR8_MACMU_9544 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_G3T9F1_G3T9F1_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_B5G027_B5G027_TAEGU_59729 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_F7DNK1_F7DNK1_CALJA_9483 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_F2Z4Z1_F2Z4Z1_PIG_9823 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_D2HM80_D2HM80_AILME_9646 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A7Z057_A7Z057_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_L5K6B8_L5K6B8_PTEAL_9402 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_M3VWG1_M3VWG1_FELCA_9685 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2I3MFZ1_A0A2I3MFZ1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A0D9RZW1_A0A0D9RZW1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A151N5B9_A0A151N5B9_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A1U7R3S5_A0A1U7R3S5_MESAU_10036 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A1V4K2Q7_A0A1V4K2Q7_PATFA_372326 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A218V1P1_A0A218V1P1_9PASE_299123 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A226NB66_A0A226NB66_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A226PGM1_A0A226PGM1_COLVI_9014 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2K5N1T7_A0A2K5N1T7_CERAT_9531 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2K6B6I0_A0A2K6B6I0_MACNE_9545 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2U3VUW6_A0A2U3VUW6_ODORO_9708 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2Y9E2S6_A0A2Y9E2S6_TRIMA_127582 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2Y9J9E9_A0A2Y9J9E9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2Y9PLZ7_A0A2Y9PLZ7_DELLE_9749 are exactly identical! WARNING: Sequences tr_F1NMY1_F1NMY1_CHICK_9031 and tr_A0A2Y9SCX5_A0A2Y9SCX5_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q5ZKC9_1433Z_CHICK_9031 and tr_U3JTK2_U3JTK2_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q5ZKC9_1433Z_CHICK_9031 and tr_A0A0Q3R9R1_A0A0Q3R9R1_AMAAE_12930 are exactly identical! WARNING: Sequences sp_Q5ZKC9_1433Z_CHICK_9031 and tr_A0A2I0MXL8_A0A2I0MXL8_COLLI_8932 are exactly identical! WARNING: Sequences sp_Q5ZKC9_1433Z_CHICK_9031 and tr_A0A1U7SCC5_A0A1U7SCC5_ALLSI_38654 are exactly identical! WARNING: Sequences sp_Q5ZKC9_1433Z_CHICK_9031 and tr_A0A226PKR9_A0A226PKR9_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q5ZKJ2_Q5ZKJ2_CHICK_9031 and tr_U3JY62_U3JY62_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q5ZKJ2_Q5ZKJ2_CHICK_9031 and tr_A0A0Q3X8M6_A0A0Q3X8M6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q5ZKJ2_Q5ZKJ2_CHICK_9031 and tr_A0A2I0LZ57_A0A2I0LZ57_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q5ZKJ2_Q5ZKJ2_CHICK_9031 and tr_A0A1V4JRD5_A0A1V4JRD5_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q5ZKJ2_Q5ZKJ2_CHICK_9031 and tr_A0A218V2L8_A0A218V2L8_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A091J174_A0A091J174_EGRGA_188379 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A093PMX7_A0A093PMX7_9PASS_328815 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A091VVZ7_A0A091VVZ7_NIPNI_128390 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A087R7L0_A0A087R7L0_APTFO_9233 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A093H9X5_A0A093H9X5_STRCA_441894 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A091GIA5_A0A091GIA5_9AVES_55661 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A099ZYM8_A0A099ZYM8_CHAVO_50402 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A2I0M285_A0A2I0M285_COLLI_8932 are exactly identical! WARNING: Sequences sp_Q5ZLQ6_1433B_CHICK_9031 and tr_A0A091HS49_A0A091HS49_CALAN_9244 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_G3UUP5_G3UUP5_MELGA_9103 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_H0ZS28_H0ZS28_TAEGU_59729 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_U3JVW6_U3JVW6_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_U3ILC4_U3ILC4_ANAPL_8839 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A0Q3MKS3_A0A0Q3MKS3_AMAAE_12930 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A091FVQ6_A0A091FVQ6_CORBR_85066 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A091JA52_A0A091JA52_EGRGA_188379 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A093QY49_A0A093QY49_9PASS_328815 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A091V1P1_A0A091V1P1_NIPNI_128390 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A087QUX5_A0A087QUX5_APTFO_9233 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A093HX11_A0A093HX11_STRCA_441894 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A091WLM6_A0A091WLM6_OPIHO_30419 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A099ZS72_A0A099ZS72_TINGU_94827 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A091GJM2_A0A091GJM2_9AVES_55661 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A0A0B262_A0A0A0B262_CHAVO_50402 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A2I0MUN0_A0A2I0MUN0_COLLI_8932 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A091HI05_A0A091HI05_CALAN_9244 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A1V4JN68_A0A1V4JN68_PATFA_372326 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A218VCA9_A0A218VCA9_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A226N4L5_A0A226N4L5_CALSU_9009 are exactly identical! WARNING: Sequences sp_Q5ZMD1_1433T_CHICK_9031 and tr_A0A226NTK7_A0A226NTK7_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and sp_P62259_1433E_MOUSE_10090 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2I3HHF3_A0A2I3HHF3_NOMLE_61853 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_G3RKZ8_G3RKZ8_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_H2NS46_H2NS46_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_G2HI54_G2HI54_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and sp_P62262_1433E_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and sp_P62260_1433E_RAT_10116 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_I3M5F9_I3M5F9_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A286XVS2_A0A286XVS2_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and sp_P62258_1433E_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_G3SX83_G3SX83_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A287A2R9_A0A287A2R9_PIG_9823 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and sp_P62261_1433E_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A337SCS9_A0A337SCS9_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A096P296_A0A096P296_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A091DRU5_A0A091DRU5_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A151MLG9_A0A151MLG9_ALLMI_8496 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A0Q3U2H3_A0A0Q3U2H3_AMAAE_12930 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A1S2ZJW8_A0A1S2ZJW8_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A1U7QJL9_A0A1U7QJL9_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A1V4K459_A0A1V4K459_PATFA_372326 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A218V1N9_A0A218V1N9_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A226MSM3_A0A226MSM3_CALSU_9009 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2K5NRU3_A0A2K5NRU3_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2K6DWH2_A0A2K6DWH2_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2K5YRS5_A0A2K5YRS5_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2R9AF76_A0A2R9AF76_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2U4ANF3_A0A2U4ANF3_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2Y9DKB0_A0A2Y9DKB0_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2Y9JVF9_A0A2Y9JVF9_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2Y9Q7R8_A0A2Y9Q7R8_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A2Y9FI13_A0A2Y9FI13_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A384CGH3_A0A384CGH3_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q5ZMT0_1433E_CHICK_9031 and tr_A0A384A978_A0A384A978_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A0D1E7J2_A0A0D1E7J2_USTMA_237631 and tr_M9MFS2_M9MFS2_PSEA3_1151754 are exactly identical! WARNING: Sequences tr_A0A0D1E7J2_A0A0D1E7J2_USTMA_237631 and tr_V5E736_V5E736_KALBG_1365824 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_M3YUN9_M3YUN9_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2I3GBB0_A0A2I3GBB0_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_G3RS45_G3RS45_GORGO_9595 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and sp_Q5R651_1433Z_PONAB_9601 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_G1SDY5_G1SDY5_RABIT_9986 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_F1PBL1_F1PBL1_CANLF_9615 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_K7DDM2_K7DDM2_PANTR_9598 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_F7BS95_F7BS95_MONDO_13616 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_F6XEB4_F6XEB4_HORSE_9796 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and sp_P63102_1433Z_RAT_10116 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_I3N206_I3N206_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A286XIL7_A0A286XIL7_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and sp_P63104_1433Z_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_G5AP01_G5AP01_HETGA_10181 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_G3SV87_G3SV87_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_G3WHE0_G3WHE0_SARHA_9305 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_F2Z558_F2Z558_PIG_9823 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_G1L0F5_G1L0F5_AILME_9646 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_G7PCF6_G7PCF6_MACFA_9541 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and sp_P63103_1433Z_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_M3WVC7_M3WVC7_FELCA_9685 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A1S3ABR1_A0A1S3ABR1_ERIEU_9365 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A1U7TL92_A0A1U7TL92_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2K5L5H7_A0A2K5L5H7_CERAT_9531 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2K5YR93_A0A2K5YR93_MANLE_9568 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2R9BQD0_A0A2R9BQD0_PANPA_9597 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2U4AHZ7_A0A2U4AHZ7_TURTR_9739 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2U3YQG6_A0A2U3YQG6_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2Y9QK13_A0A2Y9QK13_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2Y9JAB1_A0A2Y9JAB1_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A2Y9PAR8_A0A2Y9PAR8_DELLE_9749 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A384BYY2_A0A384BYY2_URSMA_29073 are exactly identical! WARNING: Sequences sp_P63101_1433Z_MOUSE_10090 and tr_A0A383ZE89_A0A383ZE89_BALAS_310752 are exactly identical! WARNING: Sequences sp_P68254_1433T_MOUSE_10090 and sp_Q6Q6X0_1433T_RABIT_9986 are exactly identical! WARNING: Sequences sp_P68254_1433T_MOUSE_10090 and sp_P68255_1433T_RAT_10116 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_M3YMV3_M3YMV3_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_J9P6N4_J9P6N4_CANLF_9615 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and sp_P68511_1433F_RAT_10116 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_A0A286X9K3_A0A286X9K3_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_F2Z4Y1_F2Z4Y1_PIG_9823 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and sp_P68509_1433F_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_M3VV31_M3VV31_FELCA_9685 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_A0A2U3VX55_A0A2U3VX55_ODORO_9708 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_A0A2U3YVJ6_A0A2U3YVJ6_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_A0A2Y9KY37_A0A2Y9KY37_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P68510_1433F_MOUSE_10090 and tr_A0A2Y9SJH0_A0A2Y9SJH0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_W5JWE7_W5JWE7_ANODA_43151 and tr_A0NBC2_A0NBC2_ANOGA_7165 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and sp_Q5RFJ2_1433T_PONAB_9601 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_F6SP02_F6SP02_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_H0WGN2_H0WGN2_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_H0VIX2_H0VIX2_CAVPO_10141 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and sp_P27348_1433T_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_G5BEK1_G5BEK1_HETGA_10181 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_F7DMM3_F7DMM3_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_F1SA98_F1SA98_PIG_9823 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and sp_Q3SZI4_1433T_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_M3W8I2_M3W8I2_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A2I3M490_A0A2I3M490_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A091DJI4_A0A091DJI4_FUKDA_885580 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A3Q0DA60_A0A3Q0DA60_MESAU_10036 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A2U4C069_A0A2U4C069_TURTR_9739 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A2U3W1I8_A0A2U3W1I8_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A2Y9FYU0_A0A2Y9FYU0_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A2Y9K750_A0A2Y9K750_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A2Y9LM78_A0A2Y9LM78_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A2Y9FRC5_A0A2Y9FRC5_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A384D781_A0A384D781_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YP97_M3YP97_MUSPF_9669 and tr_A0A384B866_A0A384B866_BALAS_310752 are exactly identical! WARNING: Sequences sp_P29310_1433Z_DROME_7227 and tr_B4J7I3_B4J7I3_DROGR_7222 are exactly identical! WARNING: Sequences sp_P29310_1433Z_DROME_7227 and tr_B4HMD3_B4HMD3_DROSE_7238 are exactly identical! WARNING: Sequences sp_P29310_1433Z_DROME_7227 and tr_B4MQ54_B4MQ54_DROWI_7260 are exactly identical! WARNING: Sequences sp_P29310_1433Z_DROME_7227 and tr_B4GHX2_B4GHX2_DROPE_7234 are exactly identical! WARNING: Sequences sp_P29310_1433Z_DROME_7227 and tr_A0A0M3QV29_A0A0M3QV29_DROBS_30019 are exactly identical! WARNING: Sequences sp_P92177_1433E_DROME_7227 and tr_B4IB82_B4IB82_DROSE_7238 are exactly identical! WARNING: Sequences sp_P92177_1433E_DROME_7227 and tr_Q296W0_Q296W0_DROPS_46245 are exactly identical! WARNING: Sequences sp_P92177_1433E_DROME_7227 and tr_A0A0Q9X1L5_A0A0Q9X1L5_DROWI_7260 are exactly identical! WARNING: Sequences sp_P92177_1433E_DROME_7227 and tr_B4GEK3_B4GEK3_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A3B3IGC2_A0A3B3IGC2_ORYLA_8090 and tr_A0A087XR47_A0A087XR47_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B3IGC2_A0A3B3IGC2_ORYLA_8090 and tr_A0A2U9B4A7_A0A2U9B4A7_SCOMX_52904 are exactly identical! WARNING: Sequences tr_B4JI49_B4JI49_DROGR_7222 and tr_B4M0W1_B4M0W1_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4JI49_B4JI49_DROGR_7222 and tr_B4K7H7_B4K7H7_DROMO_7230 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_G3QTE1_G3QTE1_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_H2P453_H2P453_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_H2QLJ0_H2QLJ0_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and sp_Q04917_1433F_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_F6RIX6_F6RIX6_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_B0KWS1_B0KWS1_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_A9CB38_A9CB38_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_A0A0D9R827_A0A0D9R827_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_A0A2K5NS78_A0A2K5NS78_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QXX5_G1QXX5_NOMLE_61853 and tr_A0A2K6DAH1_A0A2K6DAH1_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_G1P6R4_G1P6R4_MYOLU_59463 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_G3QPJ3_G3QPJ3_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A0A0MXQ1_A0A0A0MXQ1_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and sp_A4K2U9_1433B_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_G1SIT9_G1SIT9_RABIT_9986 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A2J8MKA4_A0A2J8MKA4_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_W5P303_W5P303_SHEEP_9940 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_I3M2U6_I3M2U6_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_H0WZH0_H0WZH0_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A286XGL1_A0A286XGL1_CAVPO_10141 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and sp_P31946_1433B_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_F6XFG9_F6XFG9_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_G5BB30_G5BB30_HETGA_10181 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_U3F717_U3F717_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A140T894_A0A140T894_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_L5K139_L5K139_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A096NX85_A0A096NX85_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A0D9RP06_A0A0D9RP06_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A1S3A897_A0A1S3A897_ERIEU_9365 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A3Q0ECR5_A0A3Q0ECR5_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A2K5NG38_A0A2K5NG38_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A2K6D4H2_A0A2K6D4H2_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A2K5ZTA8_A0A2K5ZTA8_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A2U4C1R5_A0A2U4C1R5_TURTR_9739 are exactly identical! WARNING: Sequences tr_G1R4G7_G1R4G7_NOMLE_61853 and tr_A0A2Y9PXF3_A0A2Y9PXF3_DELLE_9749 are exactly identical! WARNING: Sequences tr_G1RT54_G1RT54_NOMLE_61853 and tr_G3QGT3_G3QGT3_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RT54_G1RT54_NOMLE_61853 and tr_H2QHF1_H2QHF1_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1RT54_G1RT54_NOMLE_61853 and tr_F7H4H9_F7H4H9_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1RT54_G1RT54_NOMLE_61853 and tr_A0A2K5L4S7_A0A2K5L4S7_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1RT54_G1RT54_NOMLE_61853 and tr_A0A2K6CM45_A0A2K6CM45_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1RT54_G1RT54_NOMLE_61853 and tr_A0A2K5Y827_A0A2K5Y827_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1SAD1_G1SAD1_NOMLE_61853 and tr_G3R777_G3R777_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1SAD1_G1SAD1_NOMLE_61853 and tr_H2RC87_H2RC87_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1SAD1_G1SAD1_NOMLE_61853 and sp_P31947_1433S_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1SAD1_G1SAD1_NOMLE_61853 and tr_A0A2R8ZKA8_A0A2R8ZKA8_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1NVE7_G1NVE7_MYOLU_59463 and tr_F7CYG2_F7CYG2_HORSE_9796 are exactly identical! WARNING: Sequences tr_G1PWK9_G1PWK9_MYOLU_59463 and tr_W5QBD7_W5QBD7_SHEEP_9940 are exactly identical! WARNING: Sequences tr_G1PWK9_G1PWK9_MYOLU_59463 and tr_A0A096NA22_A0A096NA22_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1PWK9_G1PWK9_MYOLU_59463 and tr_A0A096NBR5_A0A096NBR5_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1PWK9_G1PWK9_MYOLU_59463 and tr_A0A091DSZ1_A0A091DSZ1_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G1PWK9_G1PWK9_MYOLU_59463 and tr_A0A2K6DKS0_A0A2K6DKS0_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1PWK9_G1PWK9_MYOLU_59463 and tr_A0A2U4AI77_A0A2U4AI77_TURTR_9739 are exactly identical! WARNING: Sequences tr_G1PWK9_G1PWK9_MYOLU_59463 and tr_A0A2U3ZHS6_A0A2U3ZHS6_ODORO_9708 are exactly identical! WARNING: Sequences tr_G3HLS2_G3HLS2_CRIGR_10029 and tr_F1PKW7_F1PKW7_CANLF_9615 are exactly identical! WARNING: Sequences tr_G3HLS2_G3HLS2_CRIGR_10029 and tr_A0A1S3ESD4_A0A1S3ESD4_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G3HLS2_G3HLS2_CRIGR_10029 and tr_A0A2U3WXG9_A0A2U3WXG9_ODORO_9708 are exactly identical! WARNING: Sequences tr_G3HLS2_G3HLS2_CRIGR_10029 and tr_A0A2U3XV42_A0A2U3XV42_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G3HLS2_G3HLS2_CRIGR_10029 and tr_A0A2Y9ILM7_A0A2Y9ILM7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G1MXY2_G1MXY2_MELGA_9103 and tr_U3IM62_U3IM62_ANAPL_8839 are exactly identical! WARNING: Sequences tr_G1MXY2_G1MXY2_MELGA_9103 and tr_A0A226MI50_A0A226MI50_CALSU_9009 are exactly identical! WARNING: Sequences tr_G1MXY2_G1MXY2_MELGA_9103 and tr_A0A226NPP2_A0A226NPP2_COLVI_9014 are exactly identical! WARNING: Sequences tr_G1NI29_G1NI29_MELGA_9103 and tr_H0ZPB2_H0ZPB2_TAEGU_59729 are exactly identical! WARNING: Sequences tr_G1NI29_G1NI29_MELGA_9103 and tr_U3I4C0_U3I4C0_ANAPL_8839 are exactly identical! WARNING: Sequences tr_G1NI29_G1NI29_MELGA_9103 and tr_A0A087QXV8_A0A087QXV8_APTFO_9233 are exactly identical! WARNING: Sequences tr_G1NI29_G1NI29_MELGA_9103 and tr_A0A1V4KH01_A0A1V4KH01_PATFA_372326 are exactly identical! WARNING: Sequences tr_G1NR71_G1NR71_MELGA_9103 and tr_U3HYQ3_U3HYQ3_ANAPL_8839 are exactly identical! WARNING: Sequences tr_H9G7C5_H9G7C5_ANOCA_28377 and tr_G7P161_G7P161_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A0R3NU81_A0A0R3NU81_DROPS_46245 and tr_A0A1W4UZK1_A0A1W4UZK1_DROFC_30025 are exactly identical! WARNING: Sequences sp_Q20655_14332_CAEEL_6239 and tr_H2VQA2_H2VQA2_CAEJA_281687 are exactly identical! WARNING: Sequences sp_Q20655_14332_CAEEL_6239 and tr_B3VAC7_B3VAC7_CAEBE_135651 are exactly identical! WARNING: Sequences sp_Q20655_14332_CAEEL_6239 and tr_E3M263_E3M263_CAERE_31234 are exactly identical! WARNING: Sequences sp_Q20655_14332_CAEEL_6239 and tr_W6EKY6_W6EKY6_9PELO_1561998 are exactly identical! WARNING: Sequences sp_Q20655_14332_CAEEL_6239 and tr_A0A261CP20_A0A261CP20_9PELO_1503980 are exactly identical! WARNING: Sequences tr_Q5K8Z6_Q5K8Z6_CRYNJ_214684 and tr_E6RCQ9_E6RCQ9_CRYGW_367775 are exactly identical! WARNING: Sequences tr_Q5K8Z6_Q5K8Z6_CRYNJ_214684 and tr_A0A095CL20_A0A095CL20_CRYGR_294750 are exactly identical! WARNING: Sequences tr_A0A2I3T046_A0A2I3T046_PANTR_9598 and tr_A0A2R9ALS2_A0A2R9ALS2_PANPA_9597 are exactly identical! WARNING: Sequences tr_F7FY78_F7FY78_MONDO_13616 and tr_G3WCJ6_G3WCJ6_SARHA_9305 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A091F4P2_A0A091F4P2_CORBR_85066 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A091JJE4_A0A091JJE4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A093QQZ2_A0A093QQZ2_9PASS_328815 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A091VDR6_A0A091VDR6_NIPNI_128390 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A087QHV7_A0A087QHV7_APTFO_9233 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A093HMJ8_A0A093HMJ8_STRCA_441894 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A091V9E2_A0A091V9E2_OPIHO_30419 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A099ZI77_A0A099ZI77_TINGU_94827 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A0A0AJZ6_A0A0A0AJZ6_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F6ZFH9_F6ZFH9_HORSE_9796 and tr_A0A091IQ97_A0A091IQ97_CALAN_9244 are exactly identical! WARNING: Sequences tr_B0WNP7_B0WNP7_CULQU_7176 and sp_Q1HR36_1433Z_AEDAE_7159 are exactly identical! WARNING: Sequences sp_O77642_1433S_SHEEP_9940 and sp_Q0VC36_1433S_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A3B5PZW7_A0A3B5PZW7_XIPMA_8083 and tr_I3K648_I3K648_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B5PZW7_A0A3B5PZW7_XIPMA_8083 and tr_A0A3B5KQ57_A0A3B5KQ57_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A3B5PZW7_A0A3B5PZW7_XIPMA_8083 and tr_Q4RRK8_Q4RRK8_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A3B5PZW7_A0A3B5PZW7_XIPMA_8083 and tr_A0A2I4CL12_A0A2I4CL12_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B5QKP5_A0A3B5QKP5_XIPMA_8083 and tr_A0A087XT24_A0A087XT24_POEFO_48698 are exactly identical! WARNING: Sequences tr_I3MMF9_I3MMF9_ICTTR_43179 and tr_A0A286XP66_A0A286XP66_CAVPO_10141 are exactly identical! WARNING: Sequences tr_I3MMF9_I3MMF9_ICTTR_43179 and tr_A0A091DWK3_A0A091DWK3_FUKDA_885580 are exactly identical! WARNING: Sequences tr_A0A1D5Q9M4_A0A1D5Q9M4_MACMU_9544 and tr_A0A0D9RNM2_A0A0D9RNM2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G7MHX1_G7MHX1_MACMU_9544 and tr_A0A096N870_A0A096N870_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7MHX1_G7MHX1_MACMU_9544 and tr_A0A2K5KL97_A0A2K5KL97_CERAT_9531 are exactly identical! WARNING: Sequences tr_G7MHX1_G7MHX1_MACMU_9544 and tr_A0A2K6B4U6_A0A2K6B4U6_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7MHX1_G7MHX1_MACMU_9544 and tr_A0A2K5XED0_A0A2K5XED0_MANLE_9568 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V0SBL5_A0A0V0SBL5_9BILA_6336 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V1D9E2_A0A0V1D9E2_TRIBR_45882 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V0XA39_A0A0V0XA39_9BILA_92179 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V0VF14_A0A0V0VF14_9BILA_181606 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V1L3H5_A0A0V1L3H5_9BILA_6335 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V0ZPY1_A0A0V0ZPY1_9BILA_990121 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V1E441_A0A0V1E441_TRIPS_6337 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V1MAC8_A0A0V1MAC8_9BILA_268474 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V1NQZ2_A0A0V1NQZ2_9BILA_92180 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V1HWU6_A0A0V1HWU6_9BILA_268475 are exactly identical! WARNING: Sequences tr_C9DTY3_C9DTY3_TRISP_6334 and tr_A0A0V0TWU9_A0A0V0TWU9_9BILA_144512 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A091ELF9_A0A091ELF9_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A091JHY0_A0A091JHY0_EGRGA_188379 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A093SIG5_A0A093SIG5_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A091UZ30_A0A091UZ30_NIPNI_128390 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A087R3G5_A0A087R3G5_APTFO_9233 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A093KBS1_A0A093KBS1_STRCA_441894 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A091WCD4_A0A091WCD4_OPIHO_30419 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A099ZDW4_A0A099ZDW4_TINGU_94827 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A091FPB9_A0A091FPB9_9AVES_55661 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A0A0AQC4_A0A0A0AQC4_CHAVO_50402 are exactly identical! WARNING: Sequences tr_H0ZHZ7_H0ZHZ7_TAEGU_59729 and tr_A0A091J7U2_A0A091J7U2_CALAN_9244 are exactly identical! WARNING: Sequences tr_H1A595_H1A595_TAEGU_59729 and tr_U3KIK8_U3KIK8_FICAL_59894 are exactly identical! WARNING: Sequences tr_H1A595_H1A595_TAEGU_59729 and tr_A0A218UL96_A0A218UL96_9PASE_299123 are exactly identical! WARNING: Sequences tr_E3MSR5_E3MSR5_CAERE_31234 and tr_A0A261CDV7_A0A261CDV7_9PELO_1503980 are exactly identical! WARNING: Sequences tr_A8X0R4_A8X0R4_CAEBR_6238 and tr_A0A2G5U4J6_A0A2G5U4J6_9PELO_1611254 are exactly identical! WARNING: Sequences tr_A8XQR9_A8XQR9_CAEBR_6238 and tr_A0A2G5SN97_A0A2G5SN97_9PELO_1611254 are exactly identical! WARNING: Sequences tr_E6ZU69_E6ZU69_SPORE_999809 and tr_A0A0F7RZ96_A0A0F7RZ96_9BASI_49012 are exactly identical! WARNING: Sequences tr_G1LBN8_G1LBN8_AILME_9646 and tr_A0A2I2V3U4_A0A2I2V3U4_FELCA_9685 are exactly identical! WARNING: Sequences tr_G1LBN8_G1LBN8_AILME_9646 and tr_A0A384CP91_A0A384CP91_URSMA_29073 are exactly identical! WARNING: Sequences tr_B3S468_B3S468_TRIAD_10228 and tr_A0A369S5D3_A0A369S5D3_9METZ_287889 are exactly identical! WARNING: Sequences tr_U3JS32_U3JS32_FICAL_59894 and tr_A0A091E944_A0A091E944_CORBR_85066 are exactly identical! WARNING: Sequences tr_U3JS32_U3JS32_FICAL_59894 and tr_A0A099Z9V5_A0A099Z9V5_TINGU_94827 are exactly identical! WARNING: Sequences tr_U3JS32_U3JS32_FICAL_59894 and tr_A0A218URV5_A0A218URV5_9PASE_299123 are exactly identical! WARNING: Sequences tr_V2WZ13_V2WZ13_MONRO_1381753 and tr_A0A0C9XZJ3_A0A0C9XZJ3_9AGAR_1095629 are exactly identical! WARNING: Sequences tr_V2WZ13_V2WZ13_MONRO_1381753 and tr_A0A0W0FC57_A0A0W0FC57_9AGAR_221103 are exactly identical! WARNING: Sequences tr_A0A015LB91_A0A015LB91_9GLOM_1432141 and tr_A0A2H5T161_A0A2H5T161_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015LB91_A0A015LB91_9GLOM_1432141 and tr_A0A2Z6S2L4_A0A2Z6S2L4_9GLOM_94130 are exactly identical! WARNING: Sequences tr_A0A044SRA0_A0A044SRA0_ONCVO_6282 and tr_A0A0R3RRY1_A0A0R3RRY1_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A067GDS1_A0A067GDS1_CITSI_2711 and tr_V4W919_V4W919_9ROSI_85681 are exactly identical! WARNING: Sequences tr_A0A067QXQ4_A0A067QXQ4_ZOONE_136037 and tr_A0A2J7QM22_A0A2J7QM22_9NEOP_105785 are exactly identical! WARNING: Sequences tr_A0A074WMX4_A0A074WMX4_9PEZI_1043004 and tr_A0A074YLG7_A0A074YLG7_9PEZI_1043005 are exactly identical! WARNING: Sequences tr_A0A074WMX4_A0A074WMX4_9PEZI_1043004 and tr_A0A074VHH6_A0A074VHH6_9PEZI_1043003 are exactly identical! WARNING: Sequences tr_A0A074WMX4_A0A074WMX4_9PEZI_1043004 and tr_A0A074YJ37_A0A074YJ37_AURPU_1043002 are exactly identical! WARNING: Sequences tr_A0A0K0FYU3_A0A0K0FYU3_STRVS_75913 and tr_A0A0N5BFD7_A0A0N5BFD7_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0FYU5_A0A0K0FYU5_STRVS_75913 and tr_A0A0K0DYN8_A0A0K0DYN8_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0FYU5_A0A0K0FYU5_STRVS_75913 and tr_A0A0N5BFD9_A0A0N5BFD9_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A151N4N6_A0A151N4N6_ALLMI_8496 and tr_A0A226NAM3_A0A226NAM3_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A151N4N6_A0A151N4N6_ALLMI_8496 and tr_A0A226P0Q2_A0A226P0Q2_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A151NZU7_A0A151NZU7_ALLMI_8496 and tr_A0A1U7RB22_A0A1U7RB22_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0Q3QQ02_A0A0Q3QQ02_AMAAE_12930 and tr_A0A1V4KKY2_A0A1V4KKY2_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A091J758_A0A091J758_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A093SE82_A0A093SE82_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A091VG44_A0A091VG44_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A091WBK2_A0A091WBK2_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A099YYR1_A0A099YYR1_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A091FY41_A0A091FY41_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A0A0AVU4_A0A0A0AVU4_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091EKB0_A0A091EKB0_CORBR_85066 and tr_A0A093GFG5_A0A093GFG5_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A0N1I8S8_A0A0N1I8S8_PAPMA_76193 and tr_A0A194PXV4_A0A194PXV4_PAPXU_66420 are exactly identical! WARNING: Sequences tr_R7VSB6_R7VSB6_COLLI_8932 and tr_A0A1V4JBX7_A0A1V4JBX7_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0D2LNW4_A0A0D2LNW4_9AGAR_945553 and tr_A0A2H3BGK6_A0A2H3BGK6_9AGAR_1076256 are exactly identical! WARNING: Sequences tr_A0A151JS98_A0A151JS98_9HYME_471704 and tr_A0A195EX62_A0A195EX62_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A195E6J1_A0A195E6J1_9HYME_471704 and tr_A0A195EU94_A0A195EU94_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A1A6AF54_A0A1A6AF54_9TREE_1296121 and tr_A0A1B9GQ91_A0A1B9GQ91_9TREE_1296120 are exactly identical! WARNING: Sequences tr_A0A1A6AF54_A0A1A6AF54_9TREE_1296121 and tr_A0A1B9ICI1_A0A1B9ICI1_9TREE_1296096 are exactly identical! WARNING: Sequences tr_A0A1S3LHE4_A0A1S3LHE4_SALSA_8030 and tr_A0A060WMG2_A0A060WMG2_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3LNK3_A0A1S3LNK3_SALSA_8030 and tr_B5X4L8_B5X4L8_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3LNK3_A0A1S3LNK3_SALSA_8030 and tr_Q6PUV9_Q6PUV9_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NQH2_A0A1S3NQH2_SALSA_8030 and tr_B5DFX5_B5DFX5_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3P1I0_A0A1S3P1I0_SALSA_8030 and tr_A0A060XH76_A0A060XH76_ONCMY_8022 are exactly identical! WARNING: Sequences tr_B5X204_B5X204_SALSA_8030 and tr_A0A060VVW0_A0A060VVW0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_B5X330_B5X330_SALSA_8030 and tr_Q6UFZ0_Q6UFZ0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_B5XDU3_B5XDU3_SALSA_8030 and tr_Q6UFZ7_Q6UFZ7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_B5XF08_B5XF08_SALSA_8030 and tr_A0A060WER1_A0A060WER1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1V8U559_A0A1V8U559_9PEZI_1974281 and tr_A0A1V8UFW7_A0A1V8UFW7_9PEZI_1974281 are exactly identical! WARNING: Sequences tr_A0A1V8U559_A0A1V8U559_9PEZI_1974281 and tr_A0A1V8T7B4_A0A1V8T7B4_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A1V8U559_A0A1V8U559_9PEZI_1974281 and tr_A0A1V8TP78_A0A1V8TP78_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A226MY30_A0A226MY30_CALSU_9009 and tr_A0A226NUK6_A0A226NUK6_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2H3EHP7_A0A2H3EHP7_ARMGA_47427 and tr_A0A284R0X1_A0A284R0X1_9AGAR_47428 are exactly identical! WARNING: Sequences tr_A0A2N5SQI9_A0A2N5SQI9_9BASI_200324 and tr_A0A2N5VSM5_A0A2N5VSM5_9BASI_200324 are exactly identical! WARNING: Sequences tr_A0A2U3UZ50_A0A2U3UZ50_TURTR_9739 and tr_A0A2Y9LN64_A0A2Y9LN64_DELLE_9749 are exactly identical! WARNING: Duplicate sequences found: 376 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/4_raxmlng_ancestral/P61981.raxml.reduced.phy Alignment comprises 1 partitions and 247 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 247 Gaps: 2.71 % Invariant sites: 9.72 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/4_raxmlng_ancestral/P61981.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/3_mltree/P61981.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 62 / 4960 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -35660.229759 [00:00:00 -35660.229759] Initial branch length optimization [00:00:00 -35187.583520] Model parameter optimization (eps = 0.100000) [00:00:19] Tree #1, final logLikelihood: -35113.653234 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.382751,0.221279) (0.277563,0.437418) (0.173840,1.281389) (0.165847,3.443768) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/4_raxmlng_ancestral/P61981.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/4_raxmlng_ancestral/P61981.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/4_raxmlng_ancestral/P61981.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P61981/4_raxmlng_ancestral/P61981.raxml.log Analysis started: 17-Jul-2021 07:21:38 / finished: 17-Jul-2021 07:22:00 Elapsed time: 21.979 seconds