RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 17:47:16 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/2_msa/P60953_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/3_mltree/P60953.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/4_raxmlng_ancestral/P60953 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626101236 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/2_msa/P60953_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 191 sites WARNING: Sequences tr_B4QLZ5_B4QLZ5_DROSI_7240 and sp_P40792_RAC1_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QLZ5_B4QLZ5_DROSI_7240 and tr_B4HVR1_B4HVR1_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4QLZ5_B4QLZ5_DROSI_7240 and tr_Q29EV6_Q29EV6_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QLZ5_B4QLZ5_DROSI_7240 and tr_B4LG76_B4LG76_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4QLZ5_B4QLZ5_DROSI_7240 and tr_B4L0N4_B4L0N4_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4QLZ5_B4QLZ5_DROSI_7240 and tr_A0A1W4W6P4_A0A1W4W6P4_DROFC_30025 are exactly identical! WARNING: Sequences tr_B4R7S5_B4R7S5_DROSI_7240 and sp_Q29HY3_CDC42_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4R7S5_B4R7S5_DROSI_7240 and tr_B4H4Q6_B4H4Q6_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4R7S5_B4R7S5_DROSI_7240 and tr_A0A1W4VTT8_A0A1W4VTT8_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9FRC3_E9FRC3_DAPPU_6669 and tr_A0A0P5IN29_A0A0P5IN29_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E9GYE9_E9GYE9_DAPPU_6669 and tr_A0A164PPI4_A0A164PPI4_9CRUS_35525 are exactly identical! WARNING: Sequences tr_A9JRY8_A9JRY8_DANRE_7955 and tr_A0A3B1J4P1_A0A3B1J4P1_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q52WY2_Q52WY2_DANRE_7955 and tr_A0A1S3P4E3_A0A1S3P4E3_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q52WY2_Q52WY2_DANRE_7955 and tr_W5UKP9_W5UKP9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q6DGB7_Q6DGB7_DANRE_7955 and tr_W5N3M1_W5N3M1_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and sp_P63001_RAC1_MOUSE_10090 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_H9GJG3_H9GJG3_ANOCA_28377 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and sp_P62999_RAC1_CANLF_9615 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_F6RQE2_F6RQE2_ORNAN_9258 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_F7GIH5_F7GIH5_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and sp_Q6RUV5_RAC1_RAT_10116 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and sp_P63000_RAC1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_Q6GL60_Q6GL60_XENTR_8364 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A287B4G4_A0A287B4G4_PIG_9823 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and sp_P62998_RAC1_BOVIN_9913 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_W5KNM1_W5KNM1_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A0D9RYP7_A0A0D9RYP7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A151N1N8_A0A151N1N8_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A0Q3U750_A0A0Q3U750_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A1V4KS38_A0A1V4KS38_PATFA_372326 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A218V762_A0A218V762_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A2Y9PL77_A0A2Y9PL77_DELLE_9749 are exactly identical! WARNING: Sequences tr_Q6LC82_Q6LC82_CHICK_9031 and tr_A0A2Y9SJX5_A0A2Y9SJX5_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q90694_CDC42_CHICK_9031 and tr_A0A337SRW5_A0A337SRW5_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q90694_CDC42_CHICK_9031 and tr_U3K6Z4_U3K6Z4_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q90694_CDC42_CHICK_9031 and tr_R0K4R2_R0K4R2_ANAPL_8839 are exactly identical! WARNING: Sequences sp_Q90694_CDC42_CHICK_9031 and tr_A0A218ULW3_A0A218ULW3_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q90694_CDC42_CHICK_9031 and tr_A0A226PCN9_A0A226PCN9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A0D1CFT4_A0A0D1CFT4_USTMA_237631 and tr_I2G4D0_I2G4D0_USTH4_1128400 are exactly identical! WARNING: Sequences tr_A0A0D1CFT4_A0A0D1CFT4_USTMA_237631 and tr_M9LNQ7_M9LNQ7_PSEA3_1151754 are exactly identical! WARNING: Sequences tr_A0A0D1CFT4_A0A0D1CFT4_USTMA_237631 and tr_V5F344_V5F344_KALBG_1365824 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_G1QFW2_G1QFW2_MYOLU_59463 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_G3HIM4_G3HIM4_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2J8T2N4_A0A2J8T2N4_PONAB_9601 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and sp_P60952_CDC42_CANLF_9615 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_F7A567_F7A567_MONDO_13616 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and sp_Q8CFN2_CDC42_RAT_10116 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_H0XSG5_H0XSG5_OTOGA_30611 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A286Y1Z7_A0A286Y1Z7_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and sp_P60953_CDC42_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_K7FPF0_K7FPF0_PELSI_13735 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and sp_Q007T2_CDC42_PIG_9823 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and sp_Q2KJ93_CDC42_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A096MRG0_A0A096MRG0_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A091EBB6_A0A091EBB6_FUKDA_885580 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A0D9S8A9_A0A0D9S8A9_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A1U7TSW4_A0A1U7TSW4_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A1U7RSI5_A0A1U7RSI5_ALLSI_38654 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A1U7QUA0_A0A1U7QUA0_MESAU_10036 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2K5M8Y4_A0A2K5M8Y4_CERAT_9531 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2K6A6F2_A0A2K6A6F2_MANLE_9568 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2R9AF88_A0A2R9AF88_PANPA_9597 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2U4BLM6_A0A2U4BLM6_TURTR_9739 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2U3WR82_A0A2U3WR82_ODORO_9708 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2U3XI77_A0A2U3XI77_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2Y9DM65_A0A2Y9DM65_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A2Y9SZ98_A0A2Y9SZ98_PHYCD_9755 are exactly identical! WARNING: Sequences sp_P60766_CDC42_MOUSE_10090 and tr_A0A384CDD5_A0A384CDD5_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q9HF56_CDC42_ASHGO_284811 and tr_G8JT71_G8JT71_ERECY_931890 are exactly identical! WARNING: Sequences sp_Q9HF56_CDC42_ASHGO_284811 and tr_A0A109V0J9_A0A109V0J9_9SACH_45286 are exactly identical! WARNING: Sequences tr_W5JCL2_W5JCL2_ANODA_43151 and sp_Q17031_CDC42_ANOGA_7165 are exactly identical! WARNING: Sequences tr_W5JCL2_W5JCL2_ANODA_43151 and tr_A0A084VU61_A0A084VU61_ANOSI_74873 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A2I3GVW9_A0A2I3GVW9_NOMLE_61853 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A2I2Z2P0_A0A2I2Z2P0_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_G1N4S3_G1N4S3_MELGA_9103 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A2I3TL10_A0A2I3TL10_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_F7A2U2_F7A2U2_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_I3LXD0_I3LXD0_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_H0XAV4_H0XAV4_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_F6RBZ7_F6RBZ7_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_G5BI03_G5BI03_HETGA_10181 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_F7HMJ4_F7HMJ4_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_G7NVT5_G7NVT5_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A2I0LQU0_A0A2I0LQU0_COLLI_8932 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A1S2ZPS5_A0A1S2ZPS5_ERIEU_9365 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A1V4KRE5_A0A1V4KRE5_PATFA_372326 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A2K6CBT3_A0A2K6CBT3_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A2Y9KAI6_A0A2Y9KAI6_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A2Y9LCK9_A0A2Y9LCK9_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3YX33_M3YX33_MUSPF_9669 and tr_A0A383ZJ15_A0A383ZJ15_BALAS_310752 are exactly identical! WARNING: Sequences tr_B6HTI8_B6HTI8_PENRW_500485 and tr_A0A0A2IKI9_A0A0A2IKI9_PENEN_27334 are exactly identical! WARNING: Sequences tr_B6HTI8_B6HTI8_PENRW_500485 and tr_A0A0G4PPJ4_A0A0G4PPJ4_PENCA_1429867 are exactly identical! WARNING: Sequences tr_B6HTI8_B6HTI8_PENRW_500485 and tr_A0A101MDL6_A0A101MDL6_9EURO_48697 are exactly identical! WARNING: Sequences tr_B6HTI8_B6HTI8_PENRW_500485 and tr_A0A1V6NKH6_A0A1V6NKH6_9EURO_60169 are exactly identical! WARNING: Sequences tr_B6HTI8_B6HTI8_PENRW_500485 and tr_A0A1V6RD90_A0A1V6RD90_9EURO_60172 are exactly identical! WARNING: Sequences tr_B6HTI8_B6HTI8_PENRW_500485 and tr_A0A1V6Z9S8_A0A1V6Z9S8_PENNA_60175 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_A0A3B5QT87_A0A3B5QT87_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_I3KWK0_I3KWK0_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_A0A3B5K3Y8_A0A3B5K3Y8_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_A0A3B1IZC6_A0A3B1IZC6_ASTMX_7994 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_A0A087XEX5_A0A087XEX5_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_A0A0P7UG32_A0A0P7UG32_9TELE_113540 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_B5X1E9_B5X1E9_SALSA_8030 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_A0A2I4CGM8_A0A2I4CGM8_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2M9A1_H2M9A1_ORYLA_8090 and tr_A0A060XF37_A0A060XF37_ONCMY_8022 are exactly identical! WARNING: Sequences tr_E3RLF7_E3RLF7_PYRTT_861557 and tr_A0A2W1GTK4_A0A2W1GTK4_9PLEO_45151 are exactly identical! WARNING: Sequences tr_B4J2E5_B4J2E5_DROGR_7222 and tr_B4N547_B4N547_DROWI_7260 are exactly identical! WARNING: Sequences tr_B0D3C2_B0D3C2_LACBS_486041 and tr_A0A0C9Y6V2_A0A0C9Y6V2_9AGAR_1095629 are exactly identical! WARNING: Sequences tr_J3KHR2_J3KHR2_COCIM_246410 and tr_E9DD38_E9DD38_COCPS_443226 are exactly identical! WARNING: Sequences tr_J3KHR2_J3KHR2_COCIM_246410 and tr_A0A0J6Y220_A0A0J6Y220_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6Q9A6_B6Q9A6_TALMQ_441960 and tr_A0A093V447_A0A093V447_TALMA_1077442 are exactly identical! WARNING: Sequences tr_G2X7A3_G2X7A3_VERDV_498257 and tr_A0A0G4MXF5_A0A0G4MXF5_9PEZI_100787 are exactly identical! WARNING: Sequences tr_C0NLY0_C0NLY0_AJECG_447093 and tr_C6H4C3_C6H4C3_AJECH_544712 are exactly identical! WARNING: Sequences tr_C0NLY0_C0NLY0_AJECG_447093 and tr_F0U8I0_F0U8I0_AJEC8_544711 are exactly identical! WARNING: Sequences tr_U9W2S4_U9W2S4_NEUCR_367110 and tr_F7W2Z2_F7W2Z2_SORMK_771870 are exactly identical! WARNING: Sequences tr_U9W2S4_U9W2S4_NEUCR_367110 and tr_G4UNA2_G4UNA2_NEUT9_510952 are exactly identical! WARNING: Sequences tr_B8NPB9_B8NPB9_ASPFN_332952 and tr_Q2UMN2_Q2UMN2_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8NPB9_B8NPB9_ASPFN_332952 and tr_A0A0F0IC61_A0A0F0IC61_ASPPU_1403190 are exactly identical! WARNING: Sequences tr_B8NPB9_B8NPB9_ASPFN_332952 and tr_A0A1S9D655_A0A1S9D655_ASPOZ_5062 are exactly identical! WARNING: Sequences sp_Q05062_CDC42_CAEEL_6239 and tr_A0A2H2I5X5_A0A2H2I5X5_CAEJA_281687 are exactly identical! WARNING: Sequences sp_Q05062_CDC42_CAEEL_6239 and tr_A0A1I7ULS4_A0A1I7ULS4_9PELO_1561998 are exactly identical! WARNING: Sequences tr_C5FLX5_C5FLX5_ARTOC_554155 and tr_E4UR05_E4UR05_ARTGP_535722 are exactly identical! WARNING: Sequences tr_C5FLX5_C5FLX5_ARTOC_554155 and tr_F2SQT2_F2SQT2_TRIRC_559305 are exactly identical! WARNING: Sequences tr_C5FLX5_C5FLX5_ARTOC_554155 and tr_A0A059IX34_A0A059IX34_9EURO_1215338 are exactly identical! WARNING: Sequences tr_C5FLX5_C5FLX5_ARTOC_554155 and tr_A0A178EWX0_A0A178EWX0_TRIRU_5551 are exactly identical! WARNING: Sequences tr_A0A179UY33_A0A179UY33_BLAGS_559298 and tr_C5G947_C5G947_AJEDR_559297 are exactly identical! WARNING: Sequences tr_A0A179UY33_A0A179UY33_BLAGS_559298 and tr_A0A1J9P4V1_A0A1J9P4V1_9EURO_1658174 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A0D2XZM2_A0A0D2XZM2_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_N4USQ6_N4USQ6_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A0N0V884_A0A0N0V884_FUSLA_179993 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_I1RN81_I1RN81_GIBZE_229533 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A1B8AL86_A0A1B8AL86_FUSPO_36050 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A2H3U2F4_A0A2H3U2F4_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A2H3H352_A0A2H3H352_FUSOX_327505 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A2K0WI27_A0A2K0WI27_GIBNY_42673 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A2T4GPN2_A0A2T4GPN2_FUSCU_5516 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A2L2TKP6_A0A2L2TKP6_9HYPO_56646 are exactly identical! WARNING: Sequences tr_F9G271_F9G271_FUSOF_660025 and tr_A0A366R613_A0A366R613_9HYPO_2109339 are exactly identical! WARNING: Sequences tr_E9EU66_E9EU66_METRA_655844 and tr_A0A0D9NVV4_A0A0D9NVV4_METAN_1291518 are exactly identical! WARNING: Sequences tr_E9E598_E9E598_METAQ_655827 and tr_A0A0B4I517_A0A0B4I517_METMF_1276143 are exactly identical! WARNING: Sequences tr_Q4WHE0_Q4WHE0_ASPFU_330879 and tr_A1DFZ2_A1DFZ2_NEOFI_331117 are exactly identical! WARNING: Sequences tr_Q4WHE0_Q4WHE0_ASPFU_330879 and tr_A0A0S7DNF1_A0A0S7DNF1_9EURO_293939 are exactly identical! WARNING: Sequences tr_Q4WHE0_Q4WHE0_ASPFU_330879 and tr_A0A397HBK0_A0A397HBK0_9EURO_41047 are exactly identical! WARNING: Sequences tr_Q4WHE0_Q4WHE0_ASPFU_330879 and tr_A0A2I1CLL1_A0A2I1CLL1_9EURO_1392255 are exactly identical! WARNING: Sequences tr_A0A3B5QJI6_A0A3B5QJI6_XIPMA_8083 and tr_A0A087XHJ3_A0A087XHJ3_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5QJI6_A0A3B5QJI6_XIPMA_8083 and tr_A0A2I4BF52_A0A2I4BF52_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B5QJI6_A0A3B5QJI6_XIPMA_8083 and tr_A0A2U9C172_A0A2U9C172_SCOMX_52904 are exactly identical! WARNING: Sequences tr_M4A9X2_M4A9X2_XIPMA_8083 and tr_A0A087Y8P1_A0A087Y8P1_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AA48_M4AA48_XIPMA_8083 and tr_A0A087YBI6_A0A087YBI6_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AJW7_M4AJW7_XIPMA_8083 and tr_G3PRQ9_G3PRQ9_GASAC_69293 are exactly identical! WARNING: Sequences tr_M4AJW7_M4AJW7_XIPMA_8083 and tr_A0A096M462_A0A096M462_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AJW7_M4AJW7_XIPMA_8083 and tr_A0A2U9CKR1_A0A2U9CKR1_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A0B4J2M3_A0A0B4J2M3_APIME_7460 and tr_A0A0L7QXK2_A0A0L7QXK2_9HYME_597456 are exactly identical! WARNING: Sequences tr_A0A158NI52_A0A158NI52_ATTCE_12957 and tr_F4WGB8_F4WGB8_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NI52_A0A158NI52_ATTCE_12957 and tr_A0A151WJX2_A0A151WJX2_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NI52_A0A158NI52_ATTCE_12957 and tr_A0A195EFM6_A0A195EFM6_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NI52_A0A158NI52_ATTCE_12957 and tr_A0A195B669_A0A195B669_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NI52_A0A158NI52_ATTCE_12957 and tr_A0A195EZW6_A0A195EZW6_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A158NI52_A0A158NI52_ATTCE_12957 and tr_A0A195CQN6_A0A195CQN6_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A158NTJ8_A0A158NTJ8_ATTCE_12957 and tr_F4WQW1_F4WQW1_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NTJ8_A0A158NTJ8_ATTCE_12957 and tr_A0A151X3C5_A0A151X3C5_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NTJ8_A0A158NTJ8_ATTCE_12957 and tr_A0A195EFX4_A0A195EFX4_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NTJ8_A0A158NTJ8_ATTCE_12957 and tr_A0A151IEJ7_A0A151IEJ7_9HYME_456900 are exactly identical! WARNING: Sequences tr_I3KJN2_I3KJN2_ORENI_8128 and tr_G3PFW3_G3PFW3_GASAC_69293 are exactly identical! WARNING: Sequences tr_A0A180GT88_A0A180GT88_PUCT1_630390 and tr_A0A2N5W1A8_A0A2N5W1A8_9BASI_200324 are exactly identical! WARNING: Sequences tr_G9NNA5_G9NNA5_HYPAI_452589 and tr_A0A0W7VJK5_A0A0W7VJK5_9HYPO_398673 are exactly identical! WARNING: Sequences tr_G9NNA5_G9NNA5_HYPAI_452589 and tr_A0A2T3YVF3_A0A2T3YVF3_9HYPO_1042311 are exactly identical! WARNING: Sequences tr_A0A1P6C408_A0A1P6C408_BRUMA_6279 and tr_A0A2K6VE84_A0A2K6VE84_ONCVO_6282 are exactly identical! WARNING: Sequences tr_A0A1P6C408_A0A1P6C408_BRUMA_6279 and tr_A0A0N4T1A3_A0A0N4T1A3_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A1P6C408_A0A1P6C408_BRUMA_6279 and tr_A0A0R3R2Y9_A0A0R3R2Y9_9BILA_42155 are exactly identical! WARNING: Sequences tr_A0A1P6C408_A0A1P6C408_BRUMA_6279 and tr_A0A182ERM4_A0A182ERM4_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A1P6C408_A0A1P6C408_BRUMA_6279 and tr_A0A1I7VL00_A0A1I7VL00_LOALO_7209 are exactly identical! WARNING: Sequences tr_G7XBX6_G7XBX6_ASPKW_1033177 and tr_A0A0L1IVP2_A0A0L1IVP2_ASPNO_1509407 are exactly identical! WARNING: Sequences tr_G7XBX6_G7XBX6_ASPKW_1033177 and tr_A0A1F8A3N1_A0A1F8A3N1_9EURO_109264 are exactly identical! WARNING: Sequences tr_G7XBX6_G7XBX6_ASPKW_1033177 and tr_A0A317ULW0_A0A317ULW0_9EURO_1448314 are exactly identical! WARNING: Sequences tr_G7XBX6_G7XBX6_ASPKW_1033177 and tr_A0A317X5T7_A0A317X5T7_9EURO_1448321 are exactly identical! WARNING: Sequences tr_G9N7Y8_G9N7Y8_HYPVG_413071 and tr_A0A0F9XCL2_A0A0F9XCL2_TRIHA_5544 are exactly identical! WARNING: Sequences tr_G9N7Y8_G9N7Y8_HYPVG_413071 and tr_A0A2T4A3W1_A0A2T4A3W1_TRIHA_983964 are exactly identical! WARNING: Sequences tr_K2SYF9_K2SYF9_MACPH_1126212 and tr_A0A1J9R474_A0A1J9R474_9PEZI_236234 are exactly identical! WARNING: Sequences tr_H1V7D4_H1V7D4_COLHI_759273 and tr_A0A166N8H9_A0A166N8H9_9PEZI_708197 are exactly identical! WARNING: Sequences tr_H1V7D4_H1V7D4_COLHI_759273 and tr_A0A167DF28_A0A167DF28_9PEZI_1573173 are exactly identical! WARNING: Sequences tr_H1V7D4_H1V7D4_COLHI_759273 and tr_A0A1Q8RZX8_A0A1Q8RZX8_9PEZI_708187 are exactly identical! WARNING: Sequences tr_F4NUT9_F4NUT9_BATDJ_684364 and tr_A0A177WCN4_A0A177WCN4_BATDE_403673 are exactly identical! WARNING: Sequences tr_E6R7G2_E6R7G2_CRYGW_367775 and tr_A0A095D307_A0A095D307_CRYGR_294750 are exactly identical! WARNING: Sequences tr_E6RA76_E6RA76_CRYGW_367775 and tr_A0A095EH70_A0A095EH70_CRYGR_294750 are exactly identical! WARNING: Sequences tr_G0PMX8_G0PMX8_CAEBE_135651 and tr_E3LRQ6_E3LRQ6_CAERE_31234 are exactly identical! WARNING: Sequences tr_G0PMX8_G0PMX8_CAEBE_135651 and tr_A8XGW3_A8XGW3_CAEBR_6238 are exactly identical! WARNING: Sequences tr_G0PMX8_G0PMX8_CAEBE_135651 and tr_A0A261C103_A0A261C103_9PELO_1503980 are exactly identical! WARNING: Sequences tr_G0PMX8_G0PMX8_CAEBE_135651 and tr_A0A2G5V1G5_A0A2G5V1G5_9PELO_1611254 are exactly identical! WARNING: Sequences tr_A8XL88_A8XL88_CAEBR_6238 and tr_A0A2G5TZL0_A0A2G5TZL0_9PELO_1611254 are exactly identical! WARNING: Sequences tr_E3QCB4_E3QCB4_COLGM_645133 and tr_A0A066XNJ3_A0A066XNJ3_COLSU_1173701 are exactly identical! WARNING: Sequences tr_A0A0Q9WDC0_A0A0Q9WDC0_DROVI_7244 and tr_A0A0M4EJY5_A0A0M4EJY5_DROBS_30019 are exactly identical! WARNING: Sequences tr_E6ZLJ7_E6ZLJ7_SPORE_999809 and tr_A0A0F7S6I1_A0A0F7S6I1_9BASI_49012 are exactly identical! WARNING: Sequences tr_G0RQA2_G0RQA2_HYPJQ_431241 and tr_A0A2T4BUC3_A0A2T4BUC3_TRILO_983965 are exactly identical! WARNING: Sequences tr_G3Y2X6_G3Y2X6_ASPNA_380704 and tr_A0A319AM32_A0A319AM32_9EURO_1450533 are exactly identical! WARNING: Sequences tr_W7M6T3_W7M6T3_GIBM7_334819 and tr_X0CVK5_X0CVK5_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_L0P6X2_L0P6X2_PNEJ8_1209962 and tr_A0A0W4ZJZ1_A0A0W4ZJZ1_PNEJ7_1408657 are exactly identical! WARNING: Sequences tr_S2J7J6_S2J7J6_MUCC1_1220926 and tr_A0A0C9M700_A0A0C9M700_9FUNG_91626 are exactly identical! WARNING: Sequences tr_S2J7J6_S2J7J6_MUCC1_1220926 and tr_A0A168MN86_A0A168MN86_MUCCL_747725 are exactly identical! WARNING: Sequences tr_S2JWK8_S2JWK8_MUCC1_1220926 and tr_A0A168I8J9_A0A168I8J9_MUCCL_747725 are exactly identical! WARNING: Sequences tr_S2K688_S2K688_MUCC1_1220926 and tr_A0A0C9N5A5_A0A0C9N5A5_9FUNG_91626 are exactly identical! WARNING: Sequences tr_S2K688_S2K688_MUCC1_1220926 and tr_A0A168MJ59_A0A168MJ59_MUCCL_747725 are exactly identical! WARNING: Sequences tr_M2T3F7_M2T3F7_COCSN_665912 and tr_W6YAF5_W6YAF5_COCCA_930089 are exactly identical! WARNING: Sequences tr_M2UH07_M2UH07_COCH5_701091 and tr_W6Z8V0_W6Z8V0_COCMI_930090 are exactly identical! WARNING: Sequences tr_U5H327_U5H327_USTV1_683840 and tr_A0A2X0MA24_A0A2X0MA24_9BASI_796604 are exactly identical! WARNING: Sequences tr_U5H327_U5H327_USTV1_683840 and tr_A0A2X0KU56_A0A2X0KU56_9BASI_289078 are exactly identical! WARNING: Sequences tr_V2X655_V2X655_MONRO_1381753 and tr_A0A0W0FMU2_A0A0W0FMU2_9AGAR_221103 are exactly identical! WARNING: Sequences tr_W9XFT8_W9XFT8_9EURO_1182543 and tr_W9VED4_W9VED4_9EURO_1182544 are exactly identical! WARNING: Sequences tr_W9XFT8_W9XFT8_9EURO_1182543 and tr_A0A0D2H651_A0A0D2H651_9EURO_1442368 are exactly identical! WARNING: Sequences tr_W9XFT8_W9XFT8_9EURO_1182543 and tr_A0A0D2KP80_A0A0D2KP80_9EURO_1442371 are exactly identical! WARNING: Sequences tr_W9XFT8_W9XFT8_9EURO_1182543 and tr_A0A0D1X587_A0A0D1X587_9EURO_1016849 are exactly identical! WARNING: Sequences tr_W9XFT8_W9XFT8_9EURO_1182543 and tr_A0A0D2J439_A0A0D2J439_9EURO_1442369 are exactly identical! WARNING: Sequences tr_W9XFT8_W9XFT8_9EURO_1182543 and tr_A0A1C1CCP6_A0A1C1CCP6_9EURO_86049 are exactly identical! WARNING: Sequences tr_A0A010S294_A0A010S294_9PEZI_1445577 and tr_A0A135V2N6_A0A135V2N6_9PEZI_1209931 are exactly identical! WARNING: Sequences tr_A0A010S294_A0A010S294_9PEZI_1445577 and tr_A0A1G4BMF6_A0A1G4BMF6_9PEZI_1209926 are exactly identical! WARNING: Sequences tr_A0A015ILY4_A0A015ILY4_9GLOM_1432141 and tr_U9T657_U9T657_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015J201_A0A015J201_9GLOM_1432141 and tr_A0A2H5S3N4_A0A2H5S3N4_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A015J9I1_A0A015J9I1_9GLOM_1432141 and tr_A0A2I1F8T3_A0A2I1F8T3_9GLOM_588596 are exactly identical! WARNING: Sequences tr_A0A015J9I1_A0A015J9I1_9GLOM_1432141 and tr_A0A2Z6RDE7_A0A2Z6RDE7_9GLOM_94130 are exactly identical! WARNING: Sequences tr_A0A044TUK3_A0A044TUK3_ONCVO_6282 and tr_A0A0R3S644_A0A0R3S644_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A044TUK3_A0A044TUK3_ONCVO_6282 and tr_A0A182EA21_A0A182EA21_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A074WS31_A0A074WS31_9PEZI_1043004 and tr_A0A074YCP7_A0A074YCP7_9PEZI_1043005 are exactly identical! WARNING: Sequences tr_A0A074WS31_A0A074WS31_9PEZI_1043004 and tr_A0A074W0W6_A0A074W0W6_9PEZI_1043003 are exactly identical! WARNING: Sequences tr_A0A074WS31_A0A074WS31_9PEZI_1043004 and tr_A0A074YRD7_A0A074YRD7_AURPU_1043002 are exactly identical! WARNING: Sequences tr_A0A084QHQ4_A0A084QHQ4_STAC4_1283841 and tr_A0A084RGB8_A0A084RGB8_STACH_1283842 are exactly identical! WARNING: Sequences tr_A0A094EJQ9_A0A094EJQ9_9PEZI_1420912 and tr_A0A1B8GJP8_A0A1B8GJP8_9PEZI_342668 are exactly identical! WARNING: Sequences tr_A0A0F8WN22_A0A0F8WN22_9EURO_308745 and tr_A0A2T5LV48_A0A2T5LV48_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A0K0F0S7_A0A0K0F0S7_STRVS_75913 and tr_A0A0N5BGA6_A0A0N5BGA6_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0K0FG16_A0A0K0FG16_STRVS_75913 and tr_A0A0N5BCS3_A0A0N5BCS3_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0A1NM61_A0A0A1NM61_9FUNG_58291 and tr_A0A2G4SMW4_A0A2G4SMW4_9FUNG_1340429 are exactly identical! WARNING: Sequences tr_A0A0A1NXS4_A0A0A1NXS4_9FUNG_58291 and tr_A0A2G4STF9_A0A2G4STF9_9FUNG_1340429 are exactly identical! WARNING: Sequences tr_A0A0A1NXS4_A0A0A1NXS4_9FUNG_58291 and tr_A0A367J949_A0A367J949_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A091JKD5_A0A091JKD5_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A093SQT0_A0A093SQT0_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A091UXL5_A0A091UXL5_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A087QKD9_A0A087QKD9_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A093H683_A0A093H683_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A091WE27_A0A091WE27_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A0A0AT38_A0A0A0AT38_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A093FZ32_A0A093FZ32_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091ETM6_A0A091ETM6_CORBR_85066 and tr_A0A091HUM3_A0A091HUM3_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A194QU25_A0A194QU25_PAPMA_76193 and tr_A0A194PL43_A0A194PL43_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A0D2DZD6_A0A0D2DZD6_9EURO_215243 and tr_A0A0D2EVD4_A0A0D2EVD4_9EURO_348802 are exactly identical! WARNING: Sequences tr_A0A0D2F5C9_A0A0D2F5C9_9EURO_5601 and tr_A0A0D2AWJ7_A0A0D2AWJ7_9EURO_569365 are exactly identical! WARNING: Sequences tr_A0A0V0RRD1_A0A0V0RRD1_9BILA_6336 and tr_A0A0V0WI59_A0A0V0WI59_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0RRD1_A0A0V0RRD1_9BILA_6336 and tr_A0A0V0V0H8_A0A0V0V0H8_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0RRD1_A0A0V0RRD1_9BILA_6336 and tr_A0A0V1LSQ5_A0A0V1LSQ5_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0RRD1_A0A0V0RRD1_9BILA_6336 and tr_A0A0V1PGU2_A0A0V1PGU2_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0RRD1_A0A0V0RRD1_9BILA_6336 and tr_A0A0V1H898_A0A0V1H898_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0RRD1_A0A0V0RRD1_9BILA_6336 and tr_A0A0V0U107_A0A0V0U107_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0P1BI30_A0A0P1BI30_9BASI_401625 and tr_A0A316W7R3_A0A316W7R3_9BASI_1522189 are exactly identical! WARNING: Sequences tr_A0A165ADW0_A0A165ADW0_9HOMO_1314777 and tr_A0A165XNR9_A0A165XNR9_9HOMO_1314776 are exactly identical! WARNING: Sequences tr_A0A177U5G0_A0A177U5G0_9BASI_13291 and tr_A0A177UPQ5_A0A177UPQ5_9BASI_117179 are exactly identical! WARNING: Sequences tr_A0A194VK88_A0A194VK88_9PEZI_105487 and tr_A0A194VA26_A0A194VA26_9PEZI_694573 are exactly identical! WARNING: Sequences tr_A0A1A6AG18_A0A1A6AG18_9TREE_1296121 and tr_A0A1B9ICR3_A0A1B9ICR3_9TREE_1296096 are exactly identical! WARNING: Sequences tr_A0A1S3LBR5_A0A1S3LBR5_SALSA_8030 and tr_A0A060X9K8_A0A060X9K8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3MFY8_A0A1S3MFY8_SALSA_8030 and tr_A0A060XQK6_A0A060XQK6_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3PYV5_A0A1S3PYV5_SALSA_8030 and tr_A0A060WIZ8_A0A060WIZ8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1E3B4V1_A0A1E3B4V1_9EURO_573508 and tr_A0A1L9VW39_A0A1L9VW39_ASPGL_1160497 are exactly identical! WARNING: Sequences tr_A0A1F5L5P2_A0A1F5L5P2_9EURO_1835702 and tr_A0A1V6Q5Q7_A0A1V6Q5Q7_9EURO_416450 are exactly identical! WARNING: Sequences tr_A0A1E1LAG4_A0A1E1LAG4_9HELO_914237 and tr_A0A2V1C386_A0A2V1C386_9HELO_1485229 are exactly identical! WARNING: Sequences tr_A0A1L9PSW7_A0A1L9PSW7_ASPVE_1036611 and tr_A0A1L9TEM1_A0A1L9TEM1_9EURO_1036612 are exactly identical! WARNING: Sequences tr_A0A1L9N9H0_A0A1L9N9H0_ASPTU_767770 and tr_A0A1L9UUS1_A0A1L9UUS1_9EURO_767769 are exactly identical! WARNING: Sequences tr_A0A1L9WVH5_A0A1L9WVH5_ASPAC_690307 and tr_A0A319CKD0_A0A319CKD0_9EURO_1448315 are exactly identical! WARNING: Sequences tr_A0A1L9WVH5_A0A1L9WVH5_ASPAC_690307 and tr_A0A318ZMQ7_A0A318ZMQ7_9EURO_1450539 are exactly identical! WARNING: Sequences tr_A0A1L9WVH5_A0A1L9WVH5_ASPAC_690307 and tr_A0A2V5HZX7_A0A2V5HZX7_9EURO_1450541 are exactly identical! WARNING: Sequences tr_A0A1L9WVH5_A0A1L9WVH5_ASPAC_690307 and tr_A0A395I0R8_A0A395I0R8_9EURO_1450537 are exactly identical! WARNING: Sequences tr_A0A1L9WVH5_A0A1L9WVH5_ASPAC_690307 and tr_A0A2V5HG84_A0A2V5HG84_9EURO_1450538 are exactly identical! WARNING: Sequences tr_A0A1V8URM4_A0A1V8URM4_9PEZI_1974281 and tr_A0A1V8TIG4_A0A1V8TIG4_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A060YYQ4_A0A060YYQ4_ONCMY_8022 and tr_W5UD13_W5UD13_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2H3CWX7_A0A2H3CWX7_ARMGA_47427 and tr_A0A2H3B0V7_A0A2H3B0V7_9AGAR_1076256 are exactly identical! WARNING: Sequences tr_A0A2H3CWX7_A0A2H3CWX7_ARMGA_47427 and tr_A0A284R7M2_A0A284R7M2_9AGAR_47428 are exactly identical! WARNING: Sequences tr_A0A2G5HPS3_A0A2G5HPS3_CERBT_122368 and tr_A0A2I0SAA7_A0A2I0SAA7_9PEZI_348901 are exactly identical! WARNING: Sequences tr_A0A2G5HPS3_A0A2G5HPS3_CERBT_122368 and tr_A0A2S6BY82_A0A2S6BY82_9PEZI_357750 are exactly identical! WARNING: Sequences tr_A0A1C9II40_A0A1C9II40_9GLOM_588596 and tr_A0A2Z6QGG3_A0A2Z6QGG3_9GLOM_94130 are exactly identical! WARNING: Sequences tr_A0A2S7QQ37_A0A2S7QQ37_9HELO_2070414 and tr_A0A2S7R090_A0A2S7R090_9HELO_2070412 are exactly identical! WARNING: Sequences tr_A0A2G4SH49_A0A2G4SH49_9FUNG_1340429 and tr_A0A367J1A9_A0A367J1A9_9FUNG_86630 are exactly identical! WARNING: Duplicate sequences found: 277 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/4_raxmlng_ancestral/P60953.raxml.reduced.phy Alignment comprises 1 partitions and 191 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 191 Gaps: 0.93 % Invariant sites: 3.14 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/4_raxmlng_ancestral/P60953.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/3_mltree/P60953.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 48 / 3840 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -27448.447514 [00:00:00 -27448.447514] Initial branch length optimization [00:00:00 -26893.051083] Model parameter optimization (eps = 0.100000) [00:00:40] Tree #1, final logLikelihood: -26742.282691 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.466049,0.350871) (0.312440,0.555948) (0.143240,1.919273) (0.078271,4.955336) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/4_raxmlng_ancestral/P60953.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/4_raxmlng_ancestral/P60953.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/4_raxmlng_ancestral/P60953.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P60953/4_raxmlng_ancestral/P60953.raxml.log Analysis started: 12-Jul-2021 17:47:16 / finished: 12-Jul-2021 17:47:58 Elapsed time: 42.390 seconds Consumed energy: 3.805 Wh