RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 03-Jun-2021 02:25:02 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/2_msa/P60201_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/3_mltree/P60201.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/4_raxmlng_ancestral/P60201 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622676302 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/2_msa/P60201_nogap_msa.fasta [00:00:00] Loaded alignment with 366 taxa and 277 sites WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_G1RTB6_G1RTB6_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_G3RK50_G3RK50_GORGO_9595 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and sp_Q5R6E6_MYPR_PONAB_9601 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and sp_P60203_MYPR_RAT_10116 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_I3M3J2_I3M3J2_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_H0XCI0_H0XCI0_OTOGA_30611 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_A0A286XDE8_A0A286XDE8_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and sp_P60201_MYPR_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and sp_Q712P7_MYPR_PIG_9823 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_A0A1U7V3L7_A0A1U7V3L7_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_A0A2R8ZMV4_A0A2R8ZMV4_PANPA_9597 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_A0A2U3X1J8_A0A2U3X1J8_ODORO_9708 are exactly identical! WARNING: Sequences sp_P60202_MYPR_MOUSE_10090 and tr_A0A2Y9L2T8_A0A2Y9L2T8_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YDW4_M3YDW4_MUSPF_9669 and tr_A0A384D6P3_A0A384D6P3_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2I3G7P4_A0A2I3G7P4_NOMLE_61853 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2I2ZRH9_A0A2I2ZRH9_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and sp_Q5R9Q3_GPM6A_PONAB_9601 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2J8MQZ0_A0A2J8MQZ0_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_F6WJF3_F6WJF3_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_I3N7A8_I3N7A8_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and sp_P51674_GPM6A_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_F7EFH6_F7EFH6_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_G7P6K6_G7P6K6_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and sp_Q0VD07_GPM6A_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2I3LJE4_A0A2I3LJE4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A0D9S261_A0A0D9S261_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A3Q0CLM3_A0A3Q0CLM3_MESAU_10036 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2K5N820_A0A2K5N820_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2K6DPU8_A0A2K6DPU8_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2R9CF51_A0A2R9CF51_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2U3WBG8_A0A2U3WBG8_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2U3XXB3_A0A2U3XXB3_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YKU5_M3YKU5_MUSPF_9669 and tr_A0A2Y9J4K2_A0A2Y9J4K2_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_A0A2I2YQZ7_A0A2I2YQZ7_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_A0A2I3SD61_A0A2I3SD61_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_F6RGB0_F6RGB0_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_F6RKY6_F6RKY6_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_A0A2K5P0R6_A0A2K5P0R6_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_A0A2K6CNA4_A0A2K6CNA4_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_A0A2K5ZIJ2_A0A2K5ZIJ2_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1RDG0_G1RDG0_NOMLE_61853 and tr_A0A2R9BQI3_A0A2R9BQI3_PANPA_9597 are exactly identical! WARNING: Sequences sp_P47789_MYPR_RABIT_9986 and tr_A0A1U7QPW5_A0A1U7QPW5_MESAU_10036 are exactly identical! WARNING: Sequences tr_E2RBV1_E2RBV1_CANLF_9615 and tr_F6VK67_F6VK67_HORSE_9796 are exactly identical! WARNING: Sequences sp_P23294_MYPR_CANLF_9615 and tr_A0A2U3Z6L9_A0A2U3Z6L9_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F7FA92_F7FA92_MONDO_13616 and tr_G3WW80_G3WW80_SARHA_9305 are exactly identical! WARNING: Sequences tr_W5NQW6_W5NQW6_SHEEP_9940 and sp_P04116_MYPR_BOVIN_9913 are exactly identical! WARNING: Sequences tr_W5P968_W5P968_SHEEP_9940 and tr_A0A2I2U593_A0A2I2U593_FELCA_9685 are exactly identical! WARNING: Sequences tr_G5AKY1_G5AKY1_HETGA_10181 and tr_A0A1S3GHD9_A0A1S3GHD9_DIPOR_10020 are exactly identical! WARNING: Sequences tr_H0ZCX6_H0ZCX6_TAEGU_59729 and tr_A0A091EH98_A0A091EH98_CORBR_85066 are exactly identical! WARNING: Sequences tr_G1LWQ2_G1LWQ2_AILME_9646 and tr_A0A091CP44_A0A091CP44_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G7Q290_G7Q290_MACFA_9541 and tr_A0A096MNC2_A0A096MNC2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7Q290_G7Q290_MACFA_9541 and tr_A0A1U7TAM6_A0A1U7TAM6_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A096NXY6_A0A096NXY6_PAPAN_9555 and tr_A0A0D9RAL1_A0A0D9RAL1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096NXY6_A0A096NXY6_PAPAN_9555 and tr_A0A2K5N4B9_A0A2K5N4B9_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096NXY6_A0A096NXY6_PAPAN_9555 and tr_A0A2K6ASY6_A0A2K6ASY6_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096NXY6_A0A096NXY6_PAPAN_9555 and tr_A0A2K6AKU5_A0A2K6AKU5_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A151NMZ2_A0A151NMZ2_ALLMI_8496 and tr_A0A1U7S6S4_A0A1U7S6S4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091IUV5_A0A091IUV5_EGRGA_188379 and tr_A0A091VAM1_A0A091VAM1_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091J8Y8_A0A091J8Y8_EGRGA_188379 and tr_A0A093Q408_A0A093Q408_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A091J8Y8_A0A091J8Y8_EGRGA_188379 and tr_A0A091UR63_A0A091UR63_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091J8Y8_A0A091J8Y8_EGRGA_188379 and tr_A0A087R0J5_A0A087R0J5_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091J8Y8_A0A091J8Y8_EGRGA_188379 and tr_A0A0A0A3Z0_A0A0A0A3Z0_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091J8Y8_A0A091J8Y8_EGRGA_188379 and tr_A0A2I0ML03_A0A2I0ML03_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A091J8Y8_A0A091J8Y8_EGRGA_188379 and tr_A0A093G3A2_A0A093G3A2_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091J8Y8_A0A091J8Y8_EGRGA_188379 and tr_A0A091IPJ7_A0A091IPJ7_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091VZA6_A0A091VZA6_NIPNI_128390 and tr_A0A087QNW0_A0A087QNW0_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091VZA6_A0A091VZA6_NIPNI_128390 and tr_A0A091WF74_A0A091WF74_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A0A0A8E6_A0A0A0A8E6_CHAVO_50402 and tr_A0A091IH29_A0A091IH29_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A2I0M4L1_A0A2I0M4L1_COLLI_8932 and tr_A0A1V4KYR6_A0A1V4KYR6_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1S3RS50_A0A1S3RS50_SALSA_8030 and tr_A0A060X3B1_A0A060X3B1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A226MPF7_A0A226MPF7_CALSU_9009 and tr_A0A226PIY6_A0A226PIY6_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2Y9E9B1_A0A2Y9E9B1_TRIMA_127582 and tr_A0A2Y9FHT9_A0A2Y9FHT9_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2Y9E9B1_A0A2Y9E9B1_TRIMA_127582 and tr_A0A384AD33_A0A384AD33_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2Y9MRN4_A0A2Y9MRN4_DELLE_9749 and tr_A0A2Y9EGI8_A0A2Y9EGI8_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 74 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/4_raxmlng_ancestral/P60201.raxml.reduced.phy Alignment comprises 1 partitions and 277 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 277 Gaps: 14.07 % Invariant sites: 1.44 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/4_raxmlng_ancestral/P60201.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/3_mltree/P60201.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 70 / 5600 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -18527.271145 [00:00:00 -18527.271145] Initial branch length optimization [00:00:00 -18192.366053] Model parameter optimization (eps = 0.100000) [00:00:25] Tree #1, final logLikelihood: -18010.749566 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.353600,0.616952) (0.265869,0.913426) (0.298462,1.122780) (0.082069,2.484340) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/4_raxmlng_ancestral/P60201.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/4_raxmlng_ancestral/P60201.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/4_raxmlng_ancestral/P60201.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60201/4_raxmlng_ancestral/P60201.raxml.log Analysis started: 03-Jun-2021 02:25:02 / finished: 03-Jun-2021 02:25:29 Elapsed time: 26.464 seconds Consumed energy: 1.714 Wh