RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 02-Jun-2021 18:09:47 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/2_msa/P60174_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/3_mltree/P60174.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/4_raxmlng_ancestral/P60174 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622646587 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/2_msa/P60174_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 286 sites WARNING: Sequences tr_B4R1I7_B4R1I7_DROSI_7240 and tr_B4HZM4_B4HZM4_DROSE_7238 are exactly identical! WARNING: Sequences tr_J3K265_J3K265_COCIM_246410 and tr_E9D2W3_E9D2W3_COCPS_443226 are exactly identical! WARNING: Sequences tr_J3K265_J3K265_COCIM_246410 and tr_A0A0J6YMR4_A0A0J6YMR4_COCIT_404692 are exactly identical! WARNING: Sequences tr_B2W7G7_B2W7G7_PYRTR_426418 and tr_A0A2W1ESC0_A0A2W1ESC0_9PLEO_45151 are exactly identical! WARNING: Sequences tr_D8SSS6_D8SSS6_SELML_88036 and tr_D8SZK9_D8SZK9_SELML_88036 are exactly identical! WARNING: Sequences sp_Q7S2Z9_TPIS_NEUCR_367110 and tr_G4UN53_G4UN53_NEUT9_510952 are exactly identical! WARNING: Sequences tr_B8NM07_B8NM07_ASPFN_332952 and sp_Q9HGY8_TPIS_ASPOR_510516 are exactly identical! WARNING: Sequences tr_B8NM07_B8NM07_ASPFN_332952 and tr_A0A1S9D850_A0A1S9D850_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_A0A179UYX1_A0A179UYX1_BLAGS_559298 and tr_C5GL44_C5GL44_AJEDR_559297 are exactly identical! WARNING: Sequences tr_A0A2J8JEJ3_A0A2J8JEJ3_PANTR_9598 and sp_P60174_TPIS_HUMAN_9606 are exactly identical! WARNING: Sequences tr_F9FB38_F9FB38_FUSOF_660025 and tr_A0A0D2XEA1_A0A0D2XEA1_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9FB38_F9FB38_FUSOF_660025 and tr_X0CNZ3_X0CNZ3_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9FB38_F9FB38_FUSOF_660025 and tr_A0A2H3T3T8_A0A2H3T3T8_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9FB38_F9FB38_FUSOF_660025 and tr_A0A2H3H6B1_A0A2H3H6B1_FUSOX_327505 are exactly identical! WARNING: Sequences tr_F9FB38_F9FB38_FUSOF_660025 and tr_A0A2K0W7S5_A0A2K0W7S5_GIBNY_42673 are exactly identical! WARNING: Sequences tr_E9F1A2_E9F1A2_METRA_655844 and tr_A0A0D9NTQ5_A0A0D9NTQ5_METAN_1291518 are exactly identical! WARNING: Sequences tr_J5JHY6_J5JHY6_BEAB2_655819 and tr_A0A0A2WHK5_A0A0A2WHK5_BEABA_1245745 are exactly identical! WARNING: Sequences tr_A0A0E0FG65_A0A0E0FG65_ORYNI_4536 and tr_I1NK74_I1NK74_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0FG65_A0A0E0FG65_ORYNI_4536 and tr_A0A0E0BX34_A0A0E0BX34_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_A0A0E0FG65_A0A0E0FG65_ORYNI_4536 and tr_A0A0E0MRB5_A0A0E0MRB5_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0FG65_A0A0E0FG65_ORYNI_4536 and tr_A0A0D9Y379_A0A0D9Y379_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0IMV7_A0A0E0IMV7_ORYNI_4536 and tr_A2Z3G7_A2Z3G7_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0IMV7_A0A0E0IMV7_ORYNI_4536 and tr_I1QQR1_I1QQR1_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0IMV7_A0A0E0IMV7_ORYNI_4536 and tr_A0A0E0EU94_A0A0E0EU94_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_A0A0E0IMV7_A0A0E0IMV7_ORYNI_4536 and tr_A0A0E0QUC7_A0A0E0QUC7_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0IMV7_A0A0E0IMV7_ORYNI_4536 and tr_A0A0D3H9D6_A0A0D3H9D6_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0IMV7_A0A0E0IMV7_ORYNI_4536 and tr_A0A0E0B5S4_A0A0E0B5S4_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0IMV7_A0A0E0IMV7_ORYNI_4536 and tr_Q69K00_Q69K00_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A0A0E0IQE1_A0A0E0IQE1_ORYNI_4536 and tr_I1NT76_I1NT76_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0IQE1_A0A0E0IQE1_ORYNI_4536 and tr_A0A0E0N4S7_A0A0E0N4S7_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A2R3N5_A2R3N5_ASPNC_425011 and tr_G3XNG0_G3XNG0_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2R3N5_A2R3N5_ASPNC_425011 and tr_A0A319AX62_A0A319AX62_9EURO_1450533 are exactly identical! WARNING: Sequences tr_G7XV24_G7XV24_ASPKW_1033177 and tr_A0A146EZ45_A0A146EZ45_9EURO_1069201 are exactly identical! WARNING: Sequences tr_B8AD93_B8AD93_ORYSI_39946 and sp_P48494_TPIS_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_F4P7E3_F4P7E3_BATDJ_684364 and tr_A0A177WS71_A0A177WS71_BATDE_403673 are exactly identical! WARNING: Sequences tr_G2XNN8_G2XNN8_BOTF4_999810 and tr_M7TPU0_M7TPU0_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_B3SCI7_B3SCI7_TRIAD_10228 and tr_A0A369RU84_A0A369RU84_9METZ_287889 are exactly identical! WARNING: Sequences tr_F2PR33_F2PR33_TRIEC_559882 and tr_A0A059JKC9_A0A059JKC9_9EURO_1215338 are exactly identical! WARNING: Sequences tr_M4ENE6_M4ENE6_BRARP_51351 and tr_A0A078FS01_A0A078FS01_BRANA_3708 are exactly identical! WARNING: Sequences tr_U3I8D8_U3I8D8_ANAPL_8839 and tr_A0A091UR22_A0A091UR22_NIPNI_128390 are exactly identical! WARNING: Sequences tr_U3I8D8_U3I8D8_ANAPL_8839 and tr_A0A093I5S0_A0A093I5S0_STRCA_441894 are exactly identical! WARNING: Sequences tr_M2TND6_M2TND6_COCH5_701091 and tr_W6YAN0_W6YAN0_COCCA_930089 are exactly identical! WARNING: Sequences tr_M2TND6_M2TND6_COCH5_701091 and tr_W6YZJ1_W6YZJ1_COCMI_930090 are exactly identical! WARNING: Sequences tr_A0A096NGJ9_A0A096NGJ9_PAPAN_9555 and tr_A0A0D9RCV3_A0A0D9RCV3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096NGJ9_A0A096NGJ9_PAPAN_9555 and tr_A0A2K5KJI2_A0A2K5KJI2_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096NGJ9_A0A096NGJ9_PAPAN_9555 and tr_A0A2K6DNS1_A0A2K6DNS1_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096NGJ9_A0A096NGJ9_PAPAN_9555 and tr_A0A2K5XP91_A0A2K5XP91_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A094GGI7_A0A094GGI7_9PEZI_1420912 and tr_A0A1B8GSA2_A0A1B8GSA2_9PEZI_342668 are exactly identical! WARNING: Sequences tr_A0A0D2RT78_A0A0D2RT78_GOSRA_29730 and tr_A0A1U8M696_A0A1U8M696_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0F0ILN6_A0A0F0ILN6_ASPPU_1403190 and tr_A0A2G7FQ62_A0A2G7FQ62_9EURO_656916 are exactly identical! WARNING: Sequences tr_A0A0F8VVS2_A0A0F8VVS2_9EURO_308745 and tr_A0A2T5MAS6_A0A2T5MAS6_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A0N0DG96_A0A0N0DG96_FUSLA_179993 and tr_A0A1B8ABR4_A0A1B8ABR4_FUSPO_36050 are exactly identical! WARNING: Sequences tr_A0A091J962_A0A091J962_EGRGA_188379 and tr_A0A087RHA4_A0A087RHA4_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091J962_A0A091J962_EGRGA_188379 and tr_A0A091VY83_A0A091VY83_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A0G4PIE2_A0A0G4PIE2_PENCA_1429867 and tr_A0A1V6P217_A0A1V6P217_9EURO_60169 are exactly identical! WARNING: Sequences tr_A0A0C9MG19_A0A0C9MG19_9FUNG_91626 and tr_A0A168KJN4_A0A168KJN4_MUCCL_747725 are exactly identical! WARNING: Sequences tr_A0A0V1CQD1_A0A0V1CQD1_TRIBR_45882 and tr_A0A0V0WJA9_A0A0V0WJA9_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V1CQD1_A0A0V1CQD1_TRIBR_45882 and tr_A0A0V0UZW5_A0A0V0UZW5_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1CQD1_A0A0V1CQD1_TRIBR_45882 and tr_A0A0V1L4F2_A0A0V1L4F2_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V1CQD1_A0A0V1CQD1_TRIBR_45882 and tr_A0A0V0ZXA1_A0A0V0ZXA1_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A100IK48_A0A100IK48_ASPNG_5061 and tr_A0A1L9NJL7_A0A1L9NJL7_ASPTU_767770 are exactly identical! WARNING: Sequences tr_A0A100IK48_A0A100IK48_ASPNG_5061 and tr_A0A317VUP1_A0A317VUP1_9EURO_1448314 are exactly identical! WARNING: Sequences tr_V6RLM7_V6RLM7_GIBZE_229533 and tr_A0A2T4H1N2_A0A2T4H1N2_FUSCU_5516 are exactly identical! WARNING: Sequences tr_A0A068JFR6_A0A068JFR6_TOBAC_4097 and tr_A0A1U7XMH5_A0A1U7XMH5_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S3X2Z0_A0A1S3X2Z0_TOBAC_4097 and tr_A0A1U7XMB3_A0A1U7XMB3_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4BBF5_A0A1S4BBF5_TOBAC_4097 and tr_A0A1U7VRA4_A0A1U7VRA4_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4D3H6_A0A1S4D3H6_TOBAC_4097 and tr_A0A1U7WBV5_A0A1U7WBV5_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A226MZ03_A0A226MZ03_CALSU_9009 and tr_A0A226P9U0_A0A226P9U0_COLVI_9014 are exactly identical! WARNING: Sequences tr_K4FXE7_K4FXE7_CAPAN_4072 and tr_A0A2G3CE26_A0A2G3CE26_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2S7NU33_A0A2S7NU33_9HELO_2070414 and tr_A0A2S7QUA7_A0A2S7QUA7_9HELO_2070412 are exactly identical! WARNING: Sequences tr_A0A2V5IAM6_A0A2V5IAM6_9EURO_1450541 and tr_A0A2V5H193_A0A2V5H193_9EURO_1450538 are exactly identical! WARNING: Duplicate sequences found: 71 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/4_raxmlng_ancestral/P60174.raxml.reduced.phy Alignment comprises 1 partitions and 286 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 286 Gaps: 13.74 % Invariant sites: 1.40 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/4_raxmlng_ancestral/P60174.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/3_mltree/P60174.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 72 / 5760 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -97414.291476 [00:00:00 -97414.291476] Initial branch length optimization [00:00:00 -94876.931340] Model parameter optimization (eps = 0.100000) [00:00:32] Tree #1, final logLikelihood: -94735.479188 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.201440,0.211916) (0.313475,0.404177) (0.173625,0.847297) (0.311460,2.194503) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/4_raxmlng_ancestral/P60174.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/4_raxmlng_ancestral/P60174.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/4_raxmlng_ancestral/P60174.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P60174/4_raxmlng_ancestral/P60174.raxml.log Analysis started: 02-Jun-2021 18:09:47 / finished: 02-Jun-2021 18:10:22 Elapsed time: 35.257 seconds Consumed energy: 2.114 Wh