RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab.
Developed by: Alexey M. Kozlov and Alexandros Stamatakis.
Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth.
Latest version: https://github.com/amkozlov/raxml-ng
Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml

System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM

RAxML-NG was called at 17-Jul-2021 11:37:36 as follows:

raxml-ng --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/2_msa/P58304_trimmed_msa.fasta --data-type AA --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/3_mltree/P58304 --seed 2 --threads 1 --tree rand{20} pars{20}

Analysis options:
  run mode: ML tree search
  start tree(s): random (20)
  random seed: 2
  tip-inner: OFF
  pattern compression: ON
  per-rate scalers: OFF
  site repeats: ON
  fast spr radius: AUTO
  spr subtree cutoff: 1.000000
  branch lengths: proportional (ML estimate, algorithm: NR-FAST)
  SIMD kernels: AVX2
  parallelization: coarse-grained (auto), NONE/sequential

[00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/2_msa/P58304_trimmed_msa.fasta
[00:00:00] Loaded alignment with 1001 taxa and 59 sites

WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and sp_Q06453_AL_DROME_7227 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B4JDN7_B4JDN7_DROGR_7222 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B4ICW1_B4ICW1_DROSE_7238 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_Q29N35_Q29N35_DROPS_46245 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_K7IP95_K7IP95_NASVI_7425 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A158NE44_A0A158NE44_ATTCE_12957 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_Q7Q3Q6_Q7Q3Q6_ANOGA_7165 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A212EWE9_A0A212EWE9_DANPL_278856 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B4MTQ1_B4MTQ1_DROWI_7260 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B3MUI4_B3MUI4_DROAN_7217 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B4G8B0_B4G8B0_DROPE_7234 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B4LTK5_B4LTK5_DROVI_7244 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_B4KFJ6_B4KFJ6_DROMO_7230 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A084W5Z8_A0A084W5Z8_ANOSI_74873 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A0L0CPN8_A0A0L0CPN8_LUCCU_7375 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A026W5G4_A0A026W5G4_OOCBI_2015173 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A194R7L3_A0A194R7L3_PAPMA_76193 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A0L7RB52_A0A0L7RB52_9HYME_597456 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A151XEK8_A0A151XEK8_9HYME_64791 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A154PGI9_A0A154PGI9_9HYME_178035 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A195EZI9_A0A195EZI9_9HYME_34720 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A195CLD3_A0A195CLD3_9HYME_456900 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A0M4EP16_A0A0M4EP16_DROBS_30019 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A1W4V341_A0A1W4V341_DROFC_30025 are exactly identical!
WARNING: Sequences tr_B4Q632_B4Q632_DROSI_7240 and tr_A0A2A4JFF7_A0A2A4JFF7_HELVI_7102 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and sp_Q9W2Q1_RX_DROME_7227 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_B4J987_B4J987_DROGR_7222 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_B4I7G2_B4I7G2_DROSE_7238 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_Q28ZR7_Q28ZR7_DROPS_46245 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_Q7Q9R1_Q7Q9R1_ANOGA_7165 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_B4NNK6_B4NNK6_DROWI_7260 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_B3MIQ7_B3MIQ7_DROAN_7217 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_B4GGW0_B4GGW0_DROPE_7234 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_B4ME62_B4ME62_DROVI_7244 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_Q17KG2_Q17KG2_AEDAE_7159 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_B4KQM2_B4KQM2_DROMO_7230 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_A0A084W2J1_A0A084W2J1_ANOSI_74873 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_A0A0M4E6B4_A0A0M4E6B4_DROBS_30019 are exactly identical!
WARNING: Sequences tr_B4QFI8_B4QFI8_DROSI_7240 and tr_A0A1W4VJK6_A0A1W4VJK6_DROFC_30025 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_X2JDS9_X2JDS9_DROME_7227 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_B4JP01_B4JP01_DROGR_7222 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_B4I0N5_B4I0N5_DROSE_7238 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_A0A0R3NZ36_A0A0R3NZ36_DROPS_46245 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_B4ND79_B4ND79_DROWI_7260 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_B3MR08_B3MR08_DROAN_7217 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_B4GWC3_B4GWC3_DROPE_7234 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_B4M796_B4M796_DROVI_7244 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_A0A0M5J2U7_A0A0M5J2U7_DROBS_30019 are exactly identical!
WARNING: Sequences tr_B4R4Z4_B4R4Z4_DROSI_7240 and tr_A0A1W4VG19_A0A1W4VG19_DROFC_30025 are exactly identical!
WARNING: Sequences tr_E9GYM2_E9GYM2_DAPPU_6669 and tr_T1JB13_T1JB13_STRMM_126957 are exactly identical!
WARNING: Sequences tr_E9GYM2_E9GYM2_DAPPU_6669 and tr_A0A162SP27_A0A162SP27_9CRUS_35525 are exactly identical!
WARNING: Sequences tr_E9GYM2_E9GYM2_DAPPU_6669 and tr_A0A1D2MWZ8_A0A1D2MWZ8_ORCCI_48709 are exactly identical!
WARNING: Sequences tr_E2ALH1_E2ALH1_CAMFO_104421 and tr_A0A158P2X2_A0A158P2X2_ATTCE_12957 are exactly identical!
WARNING: Sequences tr_E2ALH1_E2ALH1_CAMFO_104421 and tr_F4X521_F4X521_ACREC_103372 are exactly identical!
WARNING: Sequences tr_E2ALH1_E2ALH1_CAMFO_104421 and tr_E2C3E9_E2C3E9_HARSA_610380 are exactly identical!
WARNING: Sequences tr_E2ALH1_E2ALH1_CAMFO_104421 and tr_A0A151WYW4_A0A151WYW4_9HYME_64791 are exactly identical!
WARNING: Sequences tr_E2ALH1_E2ALH1_CAMFO_104421 and tr_A0A195DNJ5_A0A195DNJ5_9HYME_471704 are exactly identical!
WARNING: Sequences tr_E2ALH1_E2ALH1_CAMFO_104421 and tr_A0A195EYZ6_A0A195EYZ6_9HYME_34720 are exactly identical!
WARNING: Sequences tr_E2AUF7_E2AUF7_CAMFO_104421 and tr_A0A158P0P1_A0A158P0P1_ATTCE_12957 are exactly identical!
WARNING: Sequences tr_E2AUF7_E2AUF7_CAMFO_104421 and tr_F4X7L1_F4X7L1_ACREC_103372 are exactly identical!
WARNING: Sequences tr_E2AUF7_E2AUF7_CAMFO_104421 and tr_E2C911_E2C911_HARSA_610380 are exactly identical!
WARNING: Sequences tr_E2AUF7_E2AUF7_CAMFO_104421 and tr_A0A195B246_A0A195B246_9HYME_520822 are exactly identical!
WARNING: Sequences tr_E2AUF7_E2AUF7_CAMFO_104421 and tr_A0A195FZ04_A0A195FZ04_9HYME_34720 are exactly identical!
WARNING: Sequences tr_E2AUF7_E2AUF7_CAMFO_104421 and tr_A0A195CYW2_A0A195CYW2_9HYME_456900 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A3B3IFG6_A0A3B3IFG6_ORYLA_8090 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_H2LIW5_H2LIW5_ORYLA_8090 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A3B5Q8D0_A0A3B5Q8D0_XIPMA_8083 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_M3ZYK6_M3ZYK6_XIPMA_8083 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_I3JFZ1_I3JFZ1_ORENI_8128 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_I3JP38_I3JP38_ORENI_8128 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_H2V3B5_H2V3B5_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_H2V526_H2V526_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_H3CVH2_H3CVH2_TETNG_99883 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_H3DF36_H3DF36_TETNG_99883 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_G3PSL2_G3PSL2_GASAC_69293 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_H3BDN2_H3BDN2_LATCH_7897 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_W5KAZ0_W5KAZ0_ASTMX_7994 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_W5M4M0_W5M4M0_LEPOC_7918 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A087XGU7_A0A087XGU7_POEFO_48698 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A087Y4L5_A0A087Y4L5_POEFO_48698 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A0P7ZA87_A0A0P7ZA87_9TELE_113540 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A1S3KV61_A0A1S3KV61_SALSA_8030 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A1S3PUS5_A0A1S3PUS5_SALSA_8030 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A2I4CAH7_A0A2I4CAH7_9TELE_52670 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A060WHY8_A0A060WHY8_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_W5UI02_W5UI02_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A2U9BC27_A0A2U9BC27_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_E7FGP3_E7FGP3_DANRE_7955 and tr_A0A2U9BVV5_A0A2U9BVV5_SCOMX_52904 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1D5P7V3_A0A1D5P7V3_CHICK_9031 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and sp_O35085_ARX_MOUSE_10090 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_M3XLY8_M3XLY8_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_H2LTB9_H2LTB9_ORYLA_8090 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_G3SBL5_G3SBL5_GORGO_9595 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_G1U424_G1U424_RABIT_9986 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_F6XTT5_F6XTT5_CANLF_9615 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2I3S298_A0A2I3S298_PANTR_9598 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_F6YKC8_F6YKC8_HORSE_9796 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and sp_A6YP92_ARX_RAT_10116 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A3B5QKP6_A0A3B5QKP6_XIPMA_8083 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_I3KAE5_I3KAE5_ORENI_8128 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_I3NDF3_I3NDF3_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_H0XRJ8_H0XRJ8_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_H2T4N7_H2T4N7_TAKRU_31033 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and sp_Q96QS3_ARX_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_H3CRU9_H3CRU9_TETNG_99883 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_G3WIY3_G3WIY3_SARHA_9305 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_H0Z9P9_H0Z9P9_TAEGU_59729 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_F6VGM3_F6VGM3_XENTR_8364 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2R8N850_A0A2R8N850_CALJA_9483 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A286ZPC4_A0A286ZPC4_PIG_9823 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_H3AWF5_H3AWF5_LATCH_7897 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A337RWL0_A0A337RWL0_FELCA_9685 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_U3JN80_U3JN80_FICAL_59894 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_W5KK41_W5KK41_ASTMX_7994 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_W5M1F2_W5M1F2_LEPOC_7918 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A087XCV1_A0A087XCV1_POEFO_48698 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A096MKU6_A0A096MKU6_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A0D9RPA5_A0A0D9RPA5_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A0N8K0C1_A0A0N8K0C1_9TELE_113540 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A151N095_A0A151N095_ALLMI_8496 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A0Q3MMQ6_A0A0Q3MMQ6_AMAAE_12930 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1S3AFW2_A0A1S3AFW2_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1S3G1H9_A0A1S3G1H9_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1S3NB95_A0A1S3NB95_SALSA_8030 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1S3RHF3_A0A1S3RHF3_SALSA_8030 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1L8H5U1_A0A1L8H5U1_XENLA_8355 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_B7ZS54_B7ZS54_XENLA_8355 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A3Q0EJ27_A0A3Q0EJ27_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1U8CC06_A0A1U8CC06_MESAU_10036 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A1V4JD41_A0A1V4JD41_PATFA_372326 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A060WRF7_A0A060WRF7_ONCMY_8022 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A218VCG0_A0A218VCG0_9PASE_299123 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A226N5N6_A0A226N5N6_CALSU_9009 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A226P739_A0A226P739_COLVI_9014 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2D0PTA9_A0A2D0PTA9_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_W5ULN5_W5ULN5_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2K5LYS0_A0A2K5LYS0_CERAT_9531 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2K6DJD2_A0A2K6DJD2_MACNE_9545 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2K5XNK3_A0A2K5XNK3_MANLE_9568 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2R8ZHP8_A0A2R8ZHP8_PANPA_9597 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2U4AQS1_A0A2U4AQS1_TURTR_9739 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2U3X468_A0A2U3X468_ODORO_9708 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2U3XHN9_A0A2U3XHN9_LEPWE_9713 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2U9CVX6_A0A2U9CVX6_SCOMX_52904 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2Y9G2N3_A0A2Y9G2N3_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2Y9JS14_A0A2Y9JS14_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2Y9MFZ9_A0A2Y9MFZ9_DELLE_9749 are exactly identical!
WARNING: Sequences sp_O42115_ARX_DANRE_7955 and tr_A0A2Y9S0K6_A0A2Y9S0K6_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_O42250_VSX1_DANRE_7955 and tr_A0A3B1K5E2_A0A3B1K5E2_ASTMX_7994 are exactly identical!
WARNING: Sequences sp_O42250_VSX1_DANRE_7955 and tr_A0A2D0RKS8_A0A2D0RKS8_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A3B3HYE5_A0A3B3HYE5_ORYLA_8090 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A3B5QQ67_A0A3B5QQ67_XIPMA_8083 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A3B5QRU0_A0A3B5QRU0_XIPMA_8083 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_I3J0G4_I3J0G4_ORENI_8128 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_I3KQK8_I3KQK8_ORENI_8128 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_H2TGW5_H2TGW5_TAKRU_31033 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_H2TSB7_H2TSB7_TAKRU_31033 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_H3DBQ2_H3DBQ2_TETNG_99883 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_H3DDI3_H3DDI3_TETNG_99883 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_G3P992_G3P992_GASAC_69293 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_G3PXI7_G3PXI7_GASAC_69293 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A3B1KEX6_A0A3B1KEX6_ASTMX_7994 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_W5LQJ0_W5LQJ0_ASTMX_7994 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_W5M8D2_W5M8D2_LEPOC_7918 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A087X9W2_A0A087X9W2_POEFO_48698 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A087XVZ6_A0A087XVZ6_POEFO_48698 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A0P7UU06_A0A0P7UU06_9TELE_113540 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A1S3M0J1_A0A1S3M0J1_SALSA_8030 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A1S3T500_A0A1S3T500_SALSA_8030 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A2I4AL32_A0A2I4AL32_9TELE_52670 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A2I4B574_A0A2I4B574_9TELE_52670 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A060WCR3_A0A060WCR3_ONCMY_8022 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A2D0TAM0_A0A2D0TAM0_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A2U9BIJ3_A0A2U9BIJ3_SCOMX_52904 are exactly identical!
WARNING: Sequences sp_O42357_RX2_DANRE_7955 and tr_A0A2U9C2T6_A0A2U9C2T6_SCOMX_52904 are exactly identical!
WARNING: Sequences sp_O42358_RX3_DANRE_7955 and tr_M3ZQA1_M3ZQA1_XIPMA_8083 are exactly identical!
WARNING: Sequences sp_O42358_RX3_DANRE_7955 and tr_I3JLE6_I3JLE6_ORENI_8128 are exactly identical!
WARNING: Sequences sp_O42358_RX3_DANRE_7955 and tr_H2U2X1_H2U2X1_TAKRU_31033 are exactly identical!
WARNING: Sequences sp_O42358_RX3_DANRE_7955 and tr_H3CQ00_H3CQ00_TETNG_99883 are exactly identical!
WARNING: Sequences sp_O42358_RX3_DANRE_7955 and tr_G3PVT2_G3PVT2_GASAC_69293 are exactly identical!
WARNING: Sequences sp_O42358_RX3_DANRE_7955 and tr_W5N1Z3_W5N1Z3_LEPOC_7918 are exactly identical!
WARNING: Sequences sp_O42358_RX3_DANRE_7955 and tr_A0A087XNX0_A0A087XNX0_POEFO_48698 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1D5P641_A0A1D5P641_CHICK_9031 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and sp_Q9IAL1_VSX2_CHICK_9031 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and sp_Q61412_VSX2_MOUSE_10090 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_M3YDK7_M3YDK7_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and sp_Q9I9A3_VSX2_ORYLA_8090 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G1S2B2_G1S2B2_NOMLE_61853 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G1PF66_G1PF66_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G3HNI6_G3HNI6_CRIGR_10029 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G3QJF0_G3QJF0_GORGO_9595 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_H2NLS1_H2NLS1_PONAB_9601 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G1NJ43_G1NJ43_MELGA_9103 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G1KSG9_G1KSG9_ANOCA_28377 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G1TVV9_G1TVV9_RABIT_9986 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_E2RTB3_E2RTB3_CANLF_9615 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_H2Q8L4_H2Q8L4_PANTR_9598 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_F7GCQ9_F7GCQ9_MONDO_13616 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_F6YMZ7_F6YMZ7_HORSE_9796 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_W5NS91_W5NS91_SHEEP_9940 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G3V7K0_G3V7K0_RAT_10116 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_M4AJ86_M4AJ86_XIPMA_8083 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_I3MB18_I3MB18_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_H0X9B8_H0X9B8_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_H0V089_H0V089_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and sp_P58304_VSX2_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_F7AP06_F7AP06_MACMU_9544 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G5C1M9_G5C1M9_HETGA_10181 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G3NR00_G3NR00_GASAC_69293 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G3SRA6_G3SRA6_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G3X3I5_G3X3I5_SARHA_9305 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_H0ZPE3_H0ZPE3_TAEGU_59729 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_F6TH67_F6TH67_XENTR_8364 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_F7BVN5_F7BVN5_CALJA_9483 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_F1S3F6_F1S3F6_PIG_9823 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_H3BGK9_H3BGK9_LATCH_7897 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G1MIX3_G1MIX3_AILME_9646 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_G7PAU3_G7PAU3_MACFA_9541 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_F1N3B5_F1N3B5_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_L5JQ31_L5JQ31_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A337SVZ9_A0A337SVZ9_FELCA_9685 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_U3JUU1_U3JUU1_FICAL_59894 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_U3J596_U3J596_ANAPL_8839 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A3B1IKV2_A0A3B1IKV2_ASTMX_7994 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A087Y732_A0A087Y732_POEFO_48698 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A096NRC0_A0A096NRC0_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A091DN90_A0A091DN90_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A0D9RJE8_A0A0D9RJE8_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A0P7UPC3_A0A0P7UPC3_9TELE_113540 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A151NK79_A0A151NK79_ALLMI_8496 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A091F388_A0A091F388_CORBR_85066 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A093PYP2_A0A093PYP2_9PASS_328815 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A091W020_A0A091W020_NIPNI_128390 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A087R4U3_A0A087R4U3_APTFO_9233 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A091VDH3_A0A091VDH3_OPIHO_30419 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A099YW85_A0A099YW85_TINGU_94827 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A091GVS8_A0A091GVS8_9AVES_55661 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A0A0ALT5_A0A0A0ALT5_CHAVO_50402 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A093HC08_A0A093HC08_DRYPU_118200 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A091IBL5_A0A091IBL5_CALAN_9244 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1S2ZMW5_A0A1S2ZMW5_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1S3F122_A0A1S3F122_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1S3Q474_A0A1S3Q474_SALSA_8030 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1S3SPX1_A0A1S3SPX1_SALSA_8030 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1L8F0U1_A0A1L8F0U1_XENLA_8355 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1L8F981_A0A1L8F981_XENLA_8355 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A3Q0DYB3_A0A3Q0DYB3_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1U7R8P1_A0A1U7R8P1_ALLSI_38654 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1U8CYJ7_A0A1U8CYJ7_MESAU_10036 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A1V4KFJ9_A0A1V4KFJ9_PATFA_372326 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A060WKW7_A0A060WKW7_ONCMY_8022 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A060YBV3_A0A060YBV3_ONCMY_8022 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2D0RK93_A0A2D0RK93_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2D0RLB6_A0A2D0RLB6_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2K5NPF5_A0A2K5NPF5_CERAT_9531 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2K6DJW8_A0A2K6DJW8_MACNE_9545 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2K5XC53_A0A2K5XC53_MANLE_9568 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2R9A0Y3_A0A2R9A0Y3_PANPA_9597 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2U3UZG2_A0A2U3UZG2_TURTR_9739 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2U3VVI6_A0A2U3VVI6_ODORO_9708 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2U3XHS8_A0A2U3XHS8_LEPWE_9713 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2U9CK86_A0A2U9CK86_SCOMX_52904 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2Y9DAJ1_A0A2Y9DAJ1_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2Y9JP03_A0A2Y9JP03_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2Y9N9U3_A0A2Y9N9U3_DELLE_9749 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A2Y9F8C6_A0A2Y9F8C6_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A384D3B9_A0A384D3B9_URSMA_29073 are exactly identical!
WARNING: Sequences sp_O42477_VSX2_DANRE_7955 and tr_A0A384AB50_A0A384AB50_BALAS_310752 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_H2LBP1_H2LBP1_ORYLA_8090 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A3B5R708_A0A3B5R708_XIPMA_8083 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_I3J7J7_I3J7J7_ORENI_8128 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_H2U5A6_H2U5A6_TAKRU_31033 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_G3P4T3_G3P4T3_GASAC_69293 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A3B1K2E1_A0A3B1K2E1_ASTMX_7994 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A087Y264_A0A087Y264_POEFO_48698 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A1S3MKD3_A0A1S3MKD3_SALSA_8030 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A2I4C7T7_A0A2I4C7T7_9TELE_52670 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A060WIC7_A0A060WIC7_ONCMY_8022 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A060XTI4_A0A060XTI4_ONCMY_8022 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A2D0QQP4_A0A2D0QQP4_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A2D0QSC6_A0A2D0QSC6_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A2D0QT11_A0A2D0QT11_ICTPU_7998 are exactly identical!
WARNING: Sequences sp_Q1LVQ7_ALX1_DANRE_7955 and tr_A0A2U9BUF9_A0A2U9BUF9_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and sp_Q9IAL2_VSX1_CHICK_9031 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_G1N5K2_G1N5K2_MELGA_9103 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_H0Z3Z3_H0Z3Z3_TAEGU_59729 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_U3JDA6_U3JDA6_FICAL_59894 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_U3J4G8_U3J4G8_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_A0A091FGX4_A0A091FGX4_CORBR_85066 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_A0A091VBL6_A0A091VBL6_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_A0A087QPB4_A0A087QPB4_APTFO_9233 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_A0A093GMA0_A0A093GMA0_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_A0A1D5PSC8_A0A1D5PSC8_CHICK_9031 and tr_A0A091HM81_A0A091HM81_CALAN_9244 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and sp_O35137_ALX4_MOUSE_10090 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_M3Y3Z2_M3Y3Z2_MUSPF_9669 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G1PB97_G1PB97_MYOLU_59463 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G3HWY3_G3HWY3_CRIGR_10029 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G3RED1_G3RED1_GORGO_9595 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_H2NDM4_H2NDM4_PONAB_9601 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G1KPS8_G1KPS8_ANOCA_28377 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G1SSX0_G1SSX0_RABIT_9986 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_E2RLA0_E2RLA0_CANLF_9615 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2I3T249_A0A2I3T249_PANTR_9598 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_K7E3N8_K7E3N8_MONDO_13616 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_F7DXR4_F7DXR4_HORSE_9796 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_D3ZEM1_D3ZEM1_RAT_10116 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_I3ND49_I3ND49_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_H0XKZ1_H0XKZ1_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_H0W9J7_H0W9J7_CAVPO_10141 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and sp_Q9H161_ALX4_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G5AS46_G5AS46_HETGA_10181 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_K7G155_K7G155_PELSI_13735 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G3U4Z3_G3U4Z3_LOXAF_9785 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G3W9Q1_G3W9Q1_SARHA_9305 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_F7C5Q5_F7C5Q5_XENTR_8364 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_F6PLD2_F6PLD2_CALJA_9483 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A287A150_A0A287A150_PIG_9823 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_G1LRS8_G1LRS8_AILME_9646 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and sp_Q4LAL6_ALX4_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_M3W4E3_M3W4E3_FELCA_9685 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_U3KCT6_U3KCT6_FICAL_59894 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_U3IHL9_U3IHL9_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A096N4Y9_A0A096N4Y9_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A091CPA5_A0A091CPA5_FUKDA_885580 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A0D9QZU1_A0A0D9QZU1_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A151MBA6_A0A151MBA6_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A091F4P1_A0A091F4P1_CORBR_85066 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A093S3K2_A0A093S3K2_9PASS_328815 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A091VRK0_A0A091VRK0_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A087QYI7_A0A087QYI7_APTFO_9233 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A099YQD1_A0A099YQD1_TINGU_94827 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A091GNV4_A0A091GNV4_9AVES_55661 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2I0MPX5_A0A2I0MPX5_COLLI_8932 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A091HJU9_A0A091HJU9_CALAN_9244 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A1S2ZGU8_A0A1S2ZGU8_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A1S3GBP1_A0A1S3GBP1_DIPOR_10020 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A1L8GDN8_A0A1L8GDN8_XENLA_8355 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A1L8GIL1_A0A1L8GIL1_XENLA_8355 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A1U7RZC9_A0A1U7RZC9_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A1U7Q5K9_A0A1U7Q5K9_MESAU_10036 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A1V4KEI6_A0A1V4KEI6_PATFA_372326 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A218V9B5_A0A218V9B5_9PASE_299123 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A226N1P6_A0A226N1P6_CALSU_9009 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A226PS47_A0A226PS47_COLVI_9014 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2K5LA39_A0A2K5LA39_CERAT_9531 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2K6CVM9_A0A2K6CVM9_MACNE_9545 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2K5Y838_A0A2K5Y838_MANLE_9568 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2U4CFB7_A0A2U4CFB7_TURTR_9739 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2U3VW64_A0A2U3VW64_ODORO_9708 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2Y9E5Y8_A0A2Y9E5Y8_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2Y9JUX1_A0A2Y9JUX1_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2Y9PRZ1_A0A2Y9PRZ1_DELLE_9749 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A2Y9FLV2_A0A2Y9FLV2_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A384CWV8_A0A384CWV8_URSMA_29073 are exactly identical!
WARNING: Sequences tr_O93582_O93582_CHICK_9031 and tr_A0A384A1U7_A0A384A1U7_BALAS_310752 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_H9GCT7_H9GCT7_ANOCA_28377 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_F7CDS7_F7CDS7_XENTR_8364 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_H3ANZ7_H3ANZ7_LATCH_7897 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_U3K572_U3K572_FICAL_59894 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_A0A2I0LL30_A0A2I0LL30_COLLI_8932 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_A0A1L8HRU8_A0A1L8HRU8_XENLA_8355 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_A0A1L8I2N8_A0A1L8I2N8_XENLA_8355 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_A0A1V4JGN4_A0A1V4JGN4_PATFA_372326 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_A0A226MZT8_A0A226MZT8_CALSU_9009 are exactly identical!
WARNING: Sequences sp_Q9PVX0_RX2_CHICK_9031 and tr_A0A226PBN4_A0A226PBN4_COLVI_9014 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_G1MQF6_G1MQF6_MELGA_9103 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A088AJ95_A0A088AJ95_APIME_7460 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A158P0P0_A0A158P0P0_ATTCE_12957 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_D6WQD3_D6WQD3_TRICA_7070 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_K7G2F3_K7G2F3_PELSI_13735 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_H0YPE0_H0YPE0_TAEGU_59729 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_J9JL96_J9JL96_ACYPI_7029 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_E2C912_E2C912_HARSA_610380 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_H3B098_H3B098_LATCH_7897 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_T1J820_T1J820_STRMM_126957 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_T1HCI0_T1HCI0_RHOPR_13249 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_U3KB15_U3KB15_FICAL_59894 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A067QRP4_A0A067QRP4_ZOONE_136037 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A151NCH9_A0A151NCH9_ALLMI_8496 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A0Q3MIB3_A0A0Q3MIB3_AMAAE_12930 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A091EAW0_A0A091EAW0_CORBR_85066 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A026WPI0_A0A026WPI0_OOCBI_2015173 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A0M8ZTQ8_A0A0M8ZTQ8_9HYME_166423 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A093PXW4_A0A093PXW4_9PASS_328815 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A091VS97_A0A091VS97_NIPNI_128390 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A087QXR2_A0A087QXR2_APTFO_9233 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A093JIW4_A0A093JIW4_STRCA_441894 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A099ZIH4_A0A099ZIH4_TINGU_94827 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A091G995_A0A091G995_9AVES_55661 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A0L7RC36_A0A0L7RC36_9HYME_597456 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A0A0A4Y0_A0A0A0A4Y0_CHAVO_50402 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A2I0LGU0_A0A2I0LGU0_COLLI_8932 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A093G6I9_A0A093G6I9_DRYPU_118200 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A091IAF4_A0A091IAF4_CALAN_9244 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A195DX54_A0A195DX54_9HYME_471704 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A195B1D4_A0A195B1D4_9HYME_520822 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A195FXM0_A0A195FXM0_9HYME_34720 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A1U7RXU1_A0A1U7RXU1_ALLSI_38654 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A1V4JZK8_A0A1V4JZK8_PATFA_372326 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A1W4WKN2_A0A1W4WKN2_AGRPL_224129 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A226MXA1_A0A226MXA1_CALSU_9009 are exactly identical!
WARNING: Sequences sp_Q9PVY0_RX1_CHICK_9031 and tr_A0A2A3EUU3_A0A2A3EUU3_APICC_94128 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and sp_Q8C8B0_ALX1_MOUSE_10090 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_M3Y8L3_M3Y8L3_MUSPF_9669 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G1QZZ6_G1QZZ6_NOMLE_61853 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G1PBS4_G1PBS4_MYOLU_59463 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G3HSR7_G3HSR7_CRIGR_10029 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G3QD58_G3QD58_GORGO_9595 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_H2NI70_H2NI70_PONAB_9601 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G1KKV3_G1KKV3_ANOCA_28377 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G1SWL0_G1SWL0_RABIT_9986 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_F1P961_F1P961_CANLF_9615 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_H2Q6K1_H2Q6K1_PANTR_9598 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_F6Y859_F6Y859_ORNAN_9258 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_F7F534_F7F534_MONDO_13616 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_F6VW17_F6VW17_HORSE_9796 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_W5Q1B1_W5Q1B1_SHEEP_9940 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and sp_Q63087_ALX1_RAT_10116 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_I3NDR7_I3NDR7_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_H0XAR9_H0XAR9_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_H0VXI7_H0VXI7_CAVPO_10141 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and sp_Q15699_ALX1_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G5BJL1_G5BJL1_HETGA_10181 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_K7FKP4_K7FKP4_PELSI_13735 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G3TBH5_G3TBH5_LOXAF_9785 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_H0ZC32_H0ZC32_TAEGU_59729 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_F6YEY6_F6YEY6_XENTR_8364 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_F7D9L8_F7D9L8_CALJA_9483 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A287AYX1_A0A287AYX1_PIG_9823 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_H3ACD8_H3ACD8_LATCH_7897 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_D2HVJ0_D2HVJ0_AILME_9646 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_G7PIK8_G7PIK8_MACFA_9541 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_E1BKK2_E1BKK2_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_L5JU17_L5JU17_PTEAL_9402 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2I2UIK3_A0A2I2UIK3_FELCA_9685 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_U3K7J7_U3K7J7_FICAL_59894 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_U3I088_U3I088_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A096MXS2_A0A096MXS2_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A091E0G8_A0A091E0G8_FUKDA_885580 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A0D9QV21_A0A0D9QV21_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A151LYQ9_A0A151LYQ9_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A0Q3M7L7_A0A0Q3M7L7_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A091F7C7_A0A091F7C7_CORBR_85066 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A091JMB2_A0A091JMB2_EGRGA_188379 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A093Q0U8_A0A093Q0U8_9PASS_328815 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A091UNZ2_A0A091UNZ2_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A087R8H3_A0A087R8H3_APTFO_9233 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A093HNU3_A0A093HNU3_STRCA_441894 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A091WS91_A0A091WS91_OPIHO_30419 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A099YUY2_A0A099YUY2_TINGU_94827 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A091GMG9_A0A091GMG9_9AVES_55661 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A0A0A9V9_A0A0A0A9V9_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2I0LTL8_A0A2I0LTL8_COLLI_8932 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A093GFW3_A0A093GFW3_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A091I9T0_A0A091I9T0_CALAN_9244 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1S2ZA71_A0A1S2ZA71_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1S3FH96_A0A1S3FH96_DIPOR_10020 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1L8GUS3_A0A1L8GUS3_XENLA_8355 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1L8GY99_A0A1L8GY99_XENLA_8355 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1U7TN63_A0A1U7TN63_TARSY_1868482 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1U7S7Z5_A0A1U7S7Z5_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1U7QI75_A0A1U7QI75_MESAU_10036 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A1V4KPR7_A0A1V4KPR7_PATFA_372326 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A218VAW5_A0A218VAW5_9PASE_299123 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A226N5U7_A0A226N5U7_CALSU_9009 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A226P0L8_A0A226P0L8_COLVI_9014 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2K5NLC8_A0A2K5NLC8_CERAT_9531 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2K6CG92_A0A2K6CG92_MACNE_9545 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2K5YFN0_A0A2K5YFN0_MANLE_9568 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2R9B0M3_A0A2R9B0M3_PANPA_9597 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2U3V8G0_A0A2U3V8G0_TURTR_9739 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2U3WGP3_A0A2U3WGP3_ODORO_9708 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2U3X6T2_A0A2U3X6T2_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2Y9EA01_A0A2Y9EA01_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2Y9IUQ3_A0A2Y9IUQ3_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2Y9LER6_A0A2Y9LER6_DELLE_9749 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A2Y9F3H7_A0A2Y9F3H7_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A384BUQ0_A0A384BUQ0_URSMA_29073 are exactly identical!
WARNING: Sequences tr_R4GGE5_R4GGE5_CHICK_9031 and tr_A0A383YSY1_A0A383YSY1_BALAS_310752 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_G3RZZ4_G3RZZ4_GORGO_9595 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_H2NWF8_H2NWF8_PONAB_9601 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_H2QEL5_H2QEL5_PANTR_9598 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and sp_Q9JLT7_RX_RAT_10116 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_I3MKF5_I3MKF5_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_H0WL12_H0WL12_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and sp_Q9Y2V3_RX_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_G5AYY7_G5AYY7_HETGA_10181 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_G3TJU3_G3TJU3_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_F7DZ10_F7DZ10_CALJA_9483 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_F1SMS6_F1SMS6_PIG_9823 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_G1LJ78_G1LJ78_AILME_9646 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_G7PWV7_G7PWV7_MACFA_9541 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_E1BHB8_E1BHB8_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A337S1F7_A0A337S1F7_FELCA_9685 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A096MUC3_A0A096MUC3_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A0D9RZZ6_A0A0D9RZZ6_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A1S3A487_A0A1S3A487_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A1S3FEC0_A0A1S3FEC0_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A1U7QLG8_A0A1U7QLG8_MESAU_10036 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2K5NEE2_A0A2K5NEE2_CERAT_9531 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2R9B6H5_A0A2R9B6H5_PANPA_9597 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2U4BHM4_A0A2U4BHM4_TURTR_9739 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2U3WLP4_A0A2U3WLP4_ODORO_9708 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2U3XTX0_A0A2U3XTX0_LEPWE_9713 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2Y9R2F3_A0A2Y9R2F3_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2Y9K7I4_A0A2Y9K7I4_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2Y9NYT7_A0A2Y9NYT7_DELLE_9749 are exactly identical!
WARNING: Sequences sp_O35602_RX_MOUSE_10090 and tr_A0A2Y9TKL9_A0A2Y9TKL9_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_M3XXF1_M3XXF1_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_G1NT03_G1NT03_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_G3IG30_G3IG30_CRIGR_10029 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_G3QN78_G3QN78_GORGO_9595 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_H2N6G3_H2N6G3_PONAB_9601 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_G1SXT4_G1SXT4_RABIT_9986 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_H2PZM0_H2PZM0_PANTR_9598 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_F6W269_F6W269_ORNAN_9258 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_F6WZK4_F6WZK4_MONDO_13616 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_F6R536_F6R536_HORSE_9796 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_W5QDN7_W5QDN7_SHEEP_9940 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_F1LN97_F1LN97_RAT_10116 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_I3MDU7_I3MDU7_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_H0XYQ1_H0XYQ1_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_H0W8L8_H0W8L8_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and sp_O95076_ALX3_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_G5BD72_G5BD72_HETGA_10181 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_G3VXZ8_G3VXZ8_SARHA_9305 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_H0YRH0_H0YRH0_TAEGU_59729 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_F6Q403_F6Q403_CALJA_9483 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_F1S615_F1S615_PIG_9823 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_G1LF31_G1LF31_AILME_9646 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_L5K2H3_L5K2H3_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2I2U8H6_A0A2I2U8H6_FELCA_9685 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A096NH47_A0A096NH47_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A091CX76_A0A091CX76_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A0D9S6H7_A0A0D9S6H7_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A091F0W8_A0A091F0W8_CORBR_85066 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A091J9V4_A0A091J9V4_EGRGA_188379 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A091VLU5_A0A091VLU5_NIPNI_128390 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A087QMY0_A0A087QMY0_APTFO_9233 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A093HBJ4_A0A093HBJ4_STRCA_441894 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A0A0AXJ7_A0A0A0AXJ7_CHAVO_50402 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A1S3A4Y3_A0A1S3A4Y3_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A1S3GGI1_A0A1S3GGI1_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A1U7UHT7_A0A1U7UHT7_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_Q60535_Q60535_MESAU_10036 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2K5MU88_A0A2K5MU88_CERAT_9531 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2K6ECR6_A0A2K6ECR6_MACNE_9545 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2K5YZ09_A0A2K5YZ09_MANLE_9568 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2R9CC82_A0A2R9CC82_PANPA_9597 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2U4A2T9_A0A2U4A2T9_TURTR_9739 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2Y9EB44_A0A2Y9EB44_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2Y9J0J0_A0A2Y9J0J0_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2Y9P0U9_A0A2Y9P0U9_DELLE_9749 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A2Y9SD92_A0A2Y9SD92_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A384D5L1_A0A384D5L1_URSMA_29073 are exactly identical!
WARNING: Sequences sp_O70137_ALX3_MOUSE_10090 and tr_A0A383Z3P6_A0A383Z3P6_BALAS_310752 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_G3QG17_G3QG17_GORGO_9595 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_H2P187_H2P187_PONAB_9601 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_E2RMI2_E2RMI2_CANLF_9615 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2I3T6W2_A0A2I3T6W2_PANTR_9598 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_W5PAF5_W5PAF5_SHEEP_9940 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_I3NC67_I3NC67_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and sp_Q9NZR4_VSX1_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_F6PHS9_F6PHS9_CALJA_9483 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_I3LGC8_I3LGC8_PIG_9823 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_G7PH58_G7PH58_MACFA_9541 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_M3WKW6_M3WKW6_FELCA_9685 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A096NVU9_A0A096NVU9_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A0D9S0G6_A0A0D9S0G6_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2K6AV03_A0A2K6AV03_MACNE_9545 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2K5XBF9_A0A2K5XBF9_MANLE_9568 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2R9BYB8_A0A2R9BYB8_PANPA_9597 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2U4AQD8_A0A2U4AQD8_TURTR_9739 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2U3VT72_A0A2U3VT72_ODORO_9708 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2U3YCB5_A0A2U3YCB5_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2Y9Q385_A0A2Y9Q385_DELLE_9749 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A2Y9EMA5_A0A2Y9EMA5_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A384DSE3_A0A384DSE3_URSMA_29073 are exactly identical!
WARNING: Sequences tr_M3YH15_M3YH15_MUSPF_9669 and tr_A0A384AXV2_A0A384AXV2_BALAS_310752 are exactly identical!
WARNING: Sequences tr_Q9W4B2_Q9W4B2_DROME_7227 and tr_B5DLL8_B5DLL8_DROPS_46245 are exactly identical!
WARNING: Sequences tr_Q9W4B2_Q9W4B2_DROME_7227 and tr_B4ND84_B4ND84_DROWI_7260 are exactly identical!
WARNING: Sequences tr_Q9W4B2_Q9W4B2_DROME_7227 and tr_B3MR07_B3MR07_DROAN_7217 are exactly identical!
WARNING: Sequences tr_Q9W4B2_Q9W4B2_DROME_7227 and tr_B4M799_B4M799_DROVI_7244 are exactly identical!
WARNING: Sequences tr_Q9W4B2_Q9W4B2_DROME_7227 and tr_B4L5R1_B4L5R1_DROMO_7230 are exactly identical!
WARNING: Sequences tr_Q9W4B2_Q9W4B2_DROME_7227 and tr_A0A0M3QYZ9_A0A0M3QYZ9_DROBS_30019 are exactly identical!
WARNING: Sequences tr_Q9W4B2_Q9W4B2_DROME_7227 and tr_A0A1W4VEM4_A0A1W4VEM4_DROFC_30025 are exactly identical!
WARNING: Sequences tr_H2LCV6_H2LCV6_ORYLA_8090 and tr_I3JJ91_I3JJ91_ORENI_8128 are exactly identical!
WARNING: Sequences tr_H2LCV6_H2LCV6_ORYLA_8090 and tr_H2SDC1_H2SDC1_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_H2LCV6_H2LCV6_ORYLA_8090 and tr_H3D769_H3D769_TETNG_99883 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_M4A6N9_M4A6N9_XIPMA_8083 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_I3J2S9_I3J2S9_ORENI_8128 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_H3DCE2_H3DCE2_TETNG_99883 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_H3BF96_H3BF96_LATCH_7897 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_U3JJY0_U3JJY0_FICAL_59894 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A3B1KIY0_A0A3B1KIY0_ASTMX_7994 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_W5N151_W5N151_LEPOC_7918 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A087Y3Z7_A0A087Y3Z7_POEFO_48698 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A093Q9Z9_A0A093Q9Z9_9PASS_328815 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A1S3LFW6_A0A1S3LFW6_SALSA_8030 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A1S3MID8_A0A1S3MID8_SALSA_8030 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A060Y7U1_A0A060Y7U1_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A2D0QX54_A0A2D0QX54_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_H2LP06_H2LP06_ORYLA_8090 and tr_A0A2U9C0D7_A0A2U9C0D7_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_B4J989_B4J989_DROGR_7222 and tr_Q28ZR8_Q28ZR8_DROPS_46245 are exactly identical!
WARNING: Sequences tr_B4J989_B4J989_DROGR_7222 and tr_B4GGV7_B4GGV7_DROPE_7234 are exactly identical!
WARNING: Sequences tr_B4J989_B4J989_DROGR_7222 and tr_A0A0L0CFG2_A0A0L0CFG2_LUCCU_7375 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and sp_A1YEV8_RAX2_GORGO_9595 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_G3RFJ8_G3RFJ8_GORGO_9595 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2J8SBJ1_A0A2J8SBJ1_PONAB_9601 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_E2R5X4_E2R5X4_CANLF_9615 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and sp_A2T711_RAX2_PANTR_9598 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_W5PQ31_W5PQ31_SHEEP_9940 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_I3MY76_I3MY76_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_H0X209_H0X209_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and sp_Q96IS3_RAX2_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_F6YCG6_F6YCG6_MACMU_9544 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_F7GZF8_F7GZF8_CALJA_9483 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A286ZJ12_A0A286ZJ12_PIG_9823 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_G7PYK7_G7PYK7_MACFA_9541 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and sp_Q7YRX0_RAX2_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A337RTG8_A0A337RTG8_FELCA_9685 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A0A0MW01_A0A0A0MW01_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A0D9REX2_A0A0D9REX2_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2K5MZL8_A0A2K5MZL8_CERAT_9531 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2K6CA27_A0A2K6CA27_MACNE_9545 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2K5YMP4_A0A2K5YMP4_MANLE_9568 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2R9BS48_A0A2R9BS48_PANPA_9597 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and sp_A1YG25_RAX2_PANPA_9597 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2U3VKS0_A0A2U3VKS0_ODORO_9708 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2U3Z4Y0_A0A2U3Z4Y0_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_G1QR43_G1QR43_NOMLE_61853 and tr_A0A2Y9LIX5_A0A2Y9LIX5_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_G3H6Z6_G3H6Z6_CRIGR_10029 and tr_D3ZQZ0_D3ZQZ0_RAT_10116 are exactly identical!
WARNING: Sequences tr_G3H6Z6_G3H6Z6_CRIGR_10029 and tr_H0WYL9_H0WYL9_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_G3H6Z6_G3H6Z6_CRIGR_10029 and tr_A0A1U7Q891_A0A1U7Q891_MESAU_10036 are exactly identical!
WARNING: Sequences tr_C3ZKA3_C3ZKA3_BRAFL_7739 and tr_C3ZKA5_C3ZKA5_BRAFL_7739 are exactly identical!
WARNING: Sequences tr_G1KP43_G1KP43_ANOCA_28377 and tr_A0A093PRD0_A0A093PRD0_9PASS_328815 are exactly identical!
WARNING: Sequences tr_G1KP43_G1KP43_ANOCA_28377 and tr_A0A2I0LVB3_A0A2I0LVB3_COLLI_8932 are exactly identical!
WARNING: Sequences tr_G1KP43_G1KP43_ANOCA_28377 and tr_A0A1V4KBB6_A0A1V4KBB6_PATFA_372326 are exactly identical!
WARNING: Sequences tr_F7DSP7_F7DSP7_ORNAN_9258 and tr_W4YEV8_W4YEV8_STRPU_7668 are exactly identical!
WARNING: Sequences tr_F6ZRM4_F6ZRM4_MONDO_13616 and tr_G3X0I2_G3X0I2_SARHA_9305 are exactly identical!
WARNING: Sequences tr_K7E1P1_K7E1P1_MONDO_13616 and tr_K7FM49_K7FM49_PELSI_13735 are exactly identical!
WARNING: Sequences tr_K7E1P1_K7E1P1_MONDO_13616 and tr_G3WH46_G3WH46_SARHA_9305 are exactly identical!
WARNING: Sequences tr_A0A3B5QPQ0_A0A3B5QPQ0_XIPMA_8083 and tr_I3K7K5_I3K7K5_ORENI_8128 are exactly identical!
WARNING: Sequences tr_A0A3B5QPQ0_A0A3B5QPQ0_XIPMA_8083 and tr_A0A2U9CV05_A0A2U9CV05_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_M4ANW2_M4ANW2_XIPMA_8083 and tr_G3PEN5_G3PEN5_GASAC_69293 are exactly identical!
WARNING: Sequences tr_M4ANW2_M4ANW2_XIPMA_8083 and tr_A0A087YM84_A0A087YM84_POEFO_48698 are exactly identical!
WARNING: Sequences tr_M4ANW2_M4ANW2_XIPMA_8083 and tr_A0A1S3N224_A0A1S3N224_SALSA_8030 are exactly identical!
WARNING: Sequences tr_M4ANW2_M4ANW2_XIPMA_8083 and tr_A0A1S3RZ40_A0A1S3RZ40_SALSA_8030 are exactly identical!
WARNING: Sequences tr_M4ANW2_M4ANW2_XIPMA_8083 and tr_A0A060W1L7_A0A060W1L7_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_M4ANW2_M4ANW2_XIPMA_8083 and tr_A0A060W3I7_A0A060W3I7_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_M4ANW2_M4ANW2_XIPMA_8083 and tr_A0A2U9CDR7_A0A2U9CDR7_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_A0A087ZUS2_A0A087ZUS2_APIME_7460 and tr_A0A0N0BE59_A0A0N0BE59_9HYME_166423 are exactly identical!
WARNING: Sequences tr_A0A087ZUS2_A0A087ZUS2_APIME_7460 and tr_A0A0L7RAS2_A0A0L7RAS2_9HYME_597456 are exactly identical!
WARNING: Sequences tr_A0A087ZUS2_A0A087ZUS2_APIME_7460 and tr_A0A154P2J4_A0A154P2J4_9HYME_178035 are exactly identical!
WARNING: Sequences tr_A0A087ZUS2_A0A087ZUS2_APIME_7460 and tr_A0A2A3EQS2_A0A2A3EQS2_APICC_94128 are exactly identical!
WARNING: Sequences tr_A0A088AMF9_A0A088AMF9_APIME_7460 and tr_A0A0M9AB81_A0A0M9AB81_9HYME_166423 are exactly identical!
WARNING: Sequences tr_A0A088AMF9_A0A088AMF9_APIME_7460 and tr_A0A0L7RCH6_A0A0L7RCH6_9HYME_597456 are exactly identical!
WARNING: Sequences tr_A0A088AMF9_A0A088AMF9_APIME_7460 and tr_A0A154P1W3_A0A154P1W3_9HYME_178035 are exactly identical!
WARNING: Sequences tr_A0A088AMF9_A0A088AMF9_APIME_7460 and tr_A0A2A3EH84_A0A2A3EH84_APICC_94128 are exactly identical!
WARNING: Sequences tr_H9JGC0_H9JGC0_BOMMO_7091 and tr_A0A0L0CAX1_A0A0L0CAX1_LUCCU_7375 are exactly identical!
WARNING: Sequences tr_H9JGC0_H9JGC0_BOMMO_7091 and tr_A0A0L7LHR9_A0A0L7LHR9_9NEOP_104452 are exactly identical!
WARNING: Sequences tr_H9JGC0_H9JGC0_BOMMO_7091 and tr_A0A3Q0IQS9_A0A3Q0IQS9_DIACI_121845 are exactly identical!
WARNING: Sequences tr_H9JGC0_H9JGC0_BOMMO_7091 and tr_A0A2J7Q6F2_A0A2J7Q6F2_9NEOP_105785 are exactly identical!
WARNING: Sequences tr_A0A158NIY9_A0A158NIY9_ATTCE_12957 and tr_A0A026W4E5_A0A026W4E5_OOCBI_2015173 are exactly identical!
WARNING: Sequences tr_A0A158NIY9_A0A158NIY9_ATTCE_12957 and tr_A0A151WUZ2_A0A151WUZ2_9HYME_64791 are exactly identical!
WARNING: Sequences tr_A0A158NIY9_A0A158NIY9_ATTCE_12957 and tr_A0A151IZX3_A0A151IZX3_9HYME_471704 are exactly identical!
WARNING: Sequences tr_A0A158NIY9_A0A158NIY9_ATTCE_12957 and tr_A0A195BY85_A0A195BY85_9HYME_520822 are exactly identical!
WARNING: Sequences tr_A0A158NIY9_A0A158NIY9_ATTCE_12957 and tr_A0A195FD25_A0A195FD25_9HYME_34720 are exactly identical!
WARNING: Sequences tr_A0A158NIY9_A0A158NIY9_ATTCE_12957 and tr_A0A195CC28_A0A195CC28_9HYME_456900 are exactly identical!
WARNING: Sequences tr_I3K204_I3K204_ORENI_8128 and tr_K7GB73_K7GB73_PELSI_13735 are exactly identical!
WARNING: Sequences tr_I3K204_I3K204_ORENI_8128 and tr_A0A1U7S2D8_A0A1U7S2D8_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_I3K204_I3K204_ORENI_8128 and tr_A0A2I4BJH8_A0A2I4BJH8_9TELE_52670 are exactly identical!
WARNING: Sequences tr_H2UQ30_H2UQ30_TAKRU_31033 and tr_H3DJ73_H3DJ73_TETNG_99883 are exactly identical!
WARNING: Sequences tr_K1Q3T5_K1Q3T5_CRAGI_29159 and tr_A0A210R6A4_A0A210R6A4_MIZYE_6573 are exactly identical!
WARNING: Sequences tr_A0A0I9N9V1_A0A0I9N9V1_BRUMA_6279 and tr_A0A0N4SYP5_A0A0N4SYP5_BRUPA_6280 are exactly identical!
WARNING: Sequences tr_A0A0I9N9V1_A0A0I9N9V1_BRUMA_6279 and tr_A0A0R3RJR2_A0A0R3RJR2_9BILA_1147741 are exactly identical!
WARNING: Sequences tr_A0A0J9YBJ8_A0A0J9YBJ8_BRUMA_6279 and tr_A0A044RDQ2_A0A044RDQ2_ONCVO_6282 are exactly identical!
WARNING: Sequences tr_A0A0J9YBJ8_A0A0J9YBJ8_BRUMA_6279 and tr_A0A0N4TKG0_A0A0N4TKG0_BRUPA_6280 are exactly identical!
WARNING: Sequences tr_A0A0J9YBJ8_A0A0J9YBJ8_BRUMA_6279 and tr_A0A0R3RM13_A0A0R3RM13_9BILA_1147741 are exactly identical!
WARNING: Sequences tr_A0A0K0JIB7_A0A0K0JIB7_BRUMA_6279 and tr_A0A0B2W4V6_A0A0B2W4V6_TOXCA_6265 are exactly identical!
WARNING: Sequences tr_A0A0K0JIB7_A0A0K0JIB7_BRUMA_6279 and tr_A0A0R3RXA7_A0A0R3RXA7_9BILA_1147741 are exactly identical!
WARNING: Sequences tr_A0A0K0JIB7_A0A0K0JIB7_BRUMA_6279 and tr_A0A182ESK3_A0A182ESK3_ONCOC_42157 are exactly identical!
WARNING: Sequences tr_G5BJV5_G5BJV5_HETGA_10181 and tr_A0A091DKL9_A0A091DKL9_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_Q26657_ALX_STRPU_7668 and tr_W4YU43_W4YU43_STRPU_7668 are exactly identical!
WARNING: Sequences tr_A0A139WH33_A0A139WH33_TRICA_7070 and tr_A0A0N7ZY45_A0A0N7ZY45_9CRUS_35525 are exactly identical!
WARNING: Sequences tr_A0A139WIY8_A0A139WIY8_TRICA_7070 and tr_J9JPB0_J9JPB0_ACYPI_7029 are exactly identical!
WARNING: Sequences tr_A0A139WIY8_A0A139WIY8_TRICA_7070 and tr_E0VIP1_E0VIP1_PEDHC_121224 are exactly identical!
WARNING: Sequences tr_A0A139WIY8_A0A139WIY8_TRICA_7070 and tr_A0A1W4WCH0_A0A1W4WCH0_AGRPL_224129 are exactly identical!
WARNING: Sequences tr_D6WQD4_D6WQD4_TRICA_7070 and tr_A0A2J7PF05_A0A2J7PF05_9NEOP_105785 are exactly identical!
WARNING: Sequences tr_D6WQD4_D6WQD4_TRICA_7070 and tr_A0A210PY33_A0A210PY33_MIZYE_6573 are exactly identical!
WARNING: Sequences tr_H3DG13_H3DG13_TETNG_99883 and tr_A0A1S3M877_A0A1S3M877_SALSA_8030 are exactly identical!
WARNING: Sequences tr_G3TUC1_G3TUC1_LOXAF_9785 and tr_F1MC18_F1MC18_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_H0ZDB9_H0ZDB9_TAEGU_59729 and tr_U3J1F0_U3J1F0_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_H0ZDB9_H0ZDB9_TAEGU_59729 and tr_A0A091CQT8_A0A091CQT8_FUKDA_885580 are exactly identical!
WARNING: Sequences tr_H0ZDB9_H0ZDB9_TAEGU_59729 and tr_A0A091JF42_A0A091JF42_EGRGA_188379 are exactly identical!
WARNING: Sequences tr_H0ZDB9_H0ZDB9_TAEGU_59729 and tr_A0A1U7SWL6_A0A1U7SWL6_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_H0ZDB9_H0ZDB9_TAEGU_59729 and tr_A0A2U3Z9M3_A0A2U3Z9M3_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_H1A4E8_H1A4E8_TAEGU_59729 and tr_A0A218UCN0_A0A218UCN0_9PASE_299123 are exactly identical!
WARNING: Sequences tr_F6XUB2_F6XUB2_XENTR_8364 and tr_Q0ZLI0_Q0ZLI0_XENLA_8355 are exactly identical!
WARNING: Sequences tr_E3LYV0_E3LYV0_CAERE_31234 and tr_A0A1I7T0H8_A0A1I7T0H8_9PELO_1561998 are exactly identical!
WARNING: Sequences tr_E3LYV0_E3LYV0_CAERE_31234 and tr_A0A261AEY6_A0A261AEY6_9PELO_1503980 are exactly identical!
WARNING: Sequences tr_A8X7U3_A8X7U3_CAEBR_6238 and tr_A0A2G5URR8_A0A2G5URR8_9PELO_1611254 are exactly identical!
WARNING: Sequences tr_E0VVU0_E0VVU0_PEDHC_121224 and tr_A0A1S3DUC5_A0A1S3DUC5_DIACI_121845 are exactly identical!
WARNING: Sequences tr_E0VVU0_E0VVU0_PEDHC_121224 and tr_A0A1D2NBF2_A0A1D2NBF2_ORCCI_48709 are exactly identical!
WARNING: Sequences tr_E0W253_E0W253_PEDHC_121224 and tr_A0A067R7A8_A0A067R7A8_ZOONE_136037 are exactly identical!
WARNING: Sequences tr_E0W253_E0W253_PEDHC_121224 and tr_A0A2J7RGL2_A0A2J7RGL2_9NEOP_105785 are exactly identical!
WARNING: Sequences sp_Q9GMA3_VSX1_BOVIN_9913 and tr_A0A1S3G1F5_A0A1S3G1F5_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_Q9GMA3_VSX1_BOVIN_9913 and tr_A0A2Y9KHQ2_A0A2Y9KHQ2_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_A0A044UT23_A0A044UT23_ONCVO_6282 and tr_A0A182ECL9_A0A182ECL9_ONCOC_42157 are exactly identical!
WARNING: Sequences tr_A0A2K6WN75_A0A2K6WN75_ONCVO_6282 and tr_A0A182EA90_A0A182EA90_ONCOC_42157 are exactly identical!
WARNING: Sequences tr_A0A0K0F9B4_A0A0K0F9B4_STRVS_75913 and tr_A0A090L6Z4_A0A090L6Z4_STRRB_34506 are exactly identical!
WARNING: Sequences tr_A0A0K0F9B4_A0A0K0F9B4_STRVS_75913 and tr_A0A0N5C8L7_A0A0N5C8L7_STREA_174720 are exactly identical!
WARNING: Sequences tr_A0A0K0F9J7_A0A0K0F9J7_STRVS_75913 and tr_A0A0K0E6M6_A0A0K0E6M6_STRER_6248 are exactly identical!
WARNING: Sequences tr_A0A0K0F9J7_A0A0K0F9J7_STRVS_75913 and tr_A0A090LC03_A0A090LC03_STRRB_34506 are exactly identical!
WARNING: Sequences tr_A0A0K0F9J7_A0A0K0F9J7_STRVS_75913 and tr_A0A0N4ZGB7_A0A0N4ZGB7_PARTI_131310 are exactly identical!
WARNING: Sequences tr_A0A0K0F9J7_A0A0K0F9J7_STRVS_75913 and tr_A0A0N5BX53_A0A0N5BX53_STREA_174720 are exactly identical!
WARNING: Sequences tr_A0A0K0G2Z4_A0A0K0G2Z4_STRVS_75913 and tr_A0A0K0DTM5_A0A0K0DTM5_STRER_6248 are exactly identical!
WARNING: Sequences tr_A0A0K0G2Z4_A0A0K0G2Z4_STRVS_75913 and tr_A0A090MXV2_A0A090MXV2_STRRB_34506 are exactly identical!
WARNING: Sequences tr_A0A0K0G2Z4_A0A0K0G2Z4_STRVS_75913 and tr_A0A0N5CGR2_A0A0N5CGR2_STREA_174720 are exactly identical!
WARNING: Sequences tr_A0A0R3WLM6_A0A0R3WLM6_HYDTA_6205 and tr_A0A0R3WFS7_A0A0R3WFS7_TAEAS_60517 are exactly identical!
WARNING: Sequences tr_A0A0Q3MHJ6_A0A0Q3MHJ6_AMAAE_12930 and tr_A0A218UKS4_A0A218UKS4_9PASE_299123 are exactly identical!
WARNING: Sequences tr_A0A0Q3MHJ6_A0A0Q3MHJ6_AMAAE_12930 and tr_A0A226NL08_A0A226NL08_CALSU_9009 are exactly identical!
WARNING: Sequences tr_A0A0Q3MHJ6_A0A0Q3MHJ6_AMAAE_12930 and tr_A0A226PL69_A0A226PL69_COLVI_9014 are exactly identical!
WARNING: Sequences tr_A0A194R248_A0A194R248_PAPMA_76193 and tr_A0A194PZ14_A0A194PZ14_PAPXU_66420 are exactly identical!
WARNING: Sequences tr_A0A0V1DHR8_A0A0V1DHR8_TRIBR_45882 and tr_A0A0V0X435_A0A0V0X435_9BILA_92179 are exactly identical!
WARNING: Sequences tr_A0A0V1DHR8_A0A0V1DHR8_TRIBR_45882 and tr_A0A0V0VXW0_A0A0V0VXW0_9BILA_181606 are exactly identical!
WARNING: Sequences tr_A0A0V1DHR8_A0A0V1DHR8_TRIBR_45882 and tr_A0A0V1LLA3_A0A0V1LLA3_9BILA_6335 are exactly identical!
WARNING: Sequences tr_A0A0V1DHR8_A0A0V1DHR8_TRIBR_45882 and tr_A0A0V1PJN7_A0A0V1PJN7_9BILA_92180 are exactly identical!
WARNING: Sequences tr_A0A0V1DHR8_A0A0V1DHR8_TRIBR_45882 and tr_A0A0V0UHM0_A0A0V0UHM0_9BILA_144512 are exactly identical!
WARNING: Sequences tr_A0A0V1MK71_A0A0V1MK71_9BILA_268474 and tr_A0A0V1IA41_A0A0V1IA41_9BILA_268475 are exactly identical!
WARNING: Sequences tr_A0A1S3HZ10_A0A1S3HZ10_LINUN_7574 and tr_A0A1S3I0B2_A0A1S3I0B2_LINUN_7574 are exactly identical!
WARNING: Sequences tr_A0A1S3LTK6_A0A1S3LTK6_SALSA_8030 and tr_A0A060XYU8_A0A060XYU8_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3LTK6_A0A1S3LTK6_SALSA_8030 and tr_A0A2U9CFM5_A0A2U9CFM5_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_A0A1S3MN40_A0A1S3MN40_SALSA_8030 and tr_A0A060VY29_A0A060VY29_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A218VDL2_A0A218VDL2_9PASE_299123 and tr_A0A226NGN8_A0A226NGN8_CALSU_9009 are exactly identical!
WARNING: Sequences tr_A0A218VDL2_A0A218VDL2_9PASE_299123 and tr_A0A226NZM5_A0A226NZM5_COLVI_9014 are exactly identical!
WARNING: Sequences tr_A0A226NH27_A0A226NH27_CALSU_9009 and tr_A0A226P0U3_A0A226P0U3_COLVI_9014 are exactly identical!
WARNING: Sequences tr_A0A2A2J8L9_A0A2A2J8L9_9BILA_2018661 and tr_A0A2A2LW84_A0A2A2LW84_9BILA_2018661 are exactly identical!
WARNING: Sequences tr_A0A2D0SY09_A0A2D0SY09_ICTPU_7998 and tr_A0A2D0SYG8_A0A2D0SYG8_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A2D0SY09_A0A2D0SY09_ICTPU_7998 and tr_A0A2D0SZ09_A0A2D0SZ09_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A2U3WF16_A0A2U3WF16_ODORO_9708 and tr_A0A2U3YQ14_A0A2U3YQ14_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_A0A2Y9LUI0_A0A2Y9LUI0_DELLE_9749 and tr_A0A2Y9EUG7_A0A2Y9EUG7_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_A0A2Y9LUI0_A0A2Y9LUI0_DELLE_9749 and tr_A0A383Z2D2_A0A383Z2D2_BALAS_310752 are exactly identical!
WARNING: Duplicate sequences found: 743

NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) 
NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/3_mltree/P58304.raxml.reduced.phy

Alignment comprises 1 partitions and 59 patterns

Partition 0: noname
Model: LG4X+R4
Alignment sites / patterns: 59 / 59
Gaps: 1.64 %
Invariant sites: 10.17 %


NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/3_mltree/P58304.raxml.rba

Parallelization scheme autoconfig: 1 worker(s) x 1 thread(s)

Parallel reduction/worker buffer size: 1 KB  / 0 KB

[00:00:00] Generating 20 random starting tree(s) with 1001 taxa
[00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 59 / 4720
[00:00:00] Data distribution: max. searches per worker: 20

Starting ML tree search with 20 distinct starting trees

[00:00:00 -45271.530871] Initial branch length optimization
[00:00:02 -36237.181390] Model parameter optimization (eps = 10.000000)
[00:00:24 -36062.067899] AUTODETECT spr round 1 (radius: 5)
[00:01:48 -16934.907811] AUTODETECT spr round 2 (radius: 10)
[00:03:06 -10653.905311] AUTODETECT spr round 3 (radius: 15)
[00:04:32 -7478.946338] AUTODETECT spr round 4 (radius: 20)
[00:06:07 -6171.756137] AUTODETECT spr round 5 (radius: 25)
[00:07:42 -5359.661426] SPR radius for FAST iterations: 25 (autodetect)
[00:07:42 -5359.661426] Model parameter optimization (eps = 3.000000)
[00:07:54 -5355.090861] FAST spr round 1 (radius: 25)
[00:09:17 -4235.904658] FAST spr round 2 (radius: 25)
[00:10:37 -4125.073075] FAST spr round 3 (radius: 25)
[00:11:56 -4110.108972] FAST spr round 4 (radius: 25)
[00:13:11 -4109.997251] FAST spr round 5 (radius: 25)
[00:14:27 -4109.996657] Model parameter optimization (eps = 1.000000)
[00:14:42 -4107.204852] SLOW spr round 1 (radius: 5)
[00:15:57 -4106.397284] SLOW spr round 2 (radius: 5)
[00:17:13 -4103.761384] SLOW spr round 3 (radius: 5)
[00:18:30 -4100.822588] SLOW spr round 4 (radius: 5)
[00:19:44 -4100.822297] SLOW spr round 5 (radius: 10)
[00:21:04 -4100.614104] SLOW spr round 6 (radius: 5)
[00:22:21 -4094.071653] SLOW spr round 7 (radius: 5)
[00:23:38 -4093.923469] SLOW spr round 8 (radius: 5)
[00:24:52 -4093.923402] SLOW spr round 9 (radius: 10)
[00:26:15 -4089.764751] SLOW spr round 10 (radius: 5)
[00:27:33 -4086.831036] SLOW spr round 11 (radius: 5)
[00:28:47 -4086.831022] SLOW spr round 12 (radius: 10)
[00:30:09 -4086.355545] SLOW spr round 13 (radius: 5)
[00:31:26 -4086.352323] SLOW spr round 14 (radius: 10)
[00:32:47 -4086.352307] SLOW spr round 15 (radius: 15)
[00:34:11 -4020.016196] SLOW spr round 16 (radius: 5)
[00:35:33 -3988.272095] SLOW spr round 17 (radius: 5)
[00:36:50 -3988.271605] SLOW spr round 18 (radius: 10)
[00:38:13 -3987.023802] SLOW spr round 19 (radius: 5)
[00:39:30 -3982.266347] SLOW spr round 20 (radius: 5)
[00:40:45 -3982.266013] SLOW spr round 21 (radius: 10)
[00:42:05 -3982.265999] SLOW spr round 22 (radius: 15)
[00:43:28 -3982.265921] SLOW spr round 23 (radius: 20)
[00:45:05 -3972.907428] SLOW spr round 24 (radius: 5)
[00:46:26 -3972.904608] SLOW spr round 25 (radius: 10)
[00:47:46 -3972.904333] SLOW spr round 26 (radius: 15)
[00:49:08 -3972.904308] SLOW spr round 27 (radius: 20)
[00:50:43 -3972.904307] SLOW spr round 28 (radius: 25)
[00:52:36 -3972.904307] Model parameter optimization (eps = 0.100000)

[00:52:49] ML tree search #1, logLikelihood: -3972.274350

[00:52:49 -45272.918885] Initial branch length optimization
[00:52:51 -36293.225449] Model parameter optimization (eps = 10.000000)
[00:53:07 -36105.236992] AUTODETECT spr round 1 (radius: 5)
[00:54:31 -16530.772842] AUTODETECT spr round 2 (radius: 10)
[00:55:49 -10218.052337] AUTODETECT spr round 3 (radius: 15)
[00:57:16 -7672.442748] AUTODETECT spr round 4 (radius: 20)
[00:58:54 -6167.889811] AUTODETECT spr round 5 (radius: 25)
[01:00:31 -5357.607428] SPR radius for FAST iterations: 25 (autodetect)
[01:00:31 -5357.607428] Model parameter optimization (eps = 3.000000)
[01:00:42 -5355.116662] FAST spr round 1 (radius: 25)
[01:02:04 -4130.555373] FAST spr round 2 (radius: 25)
[01:03:24 -4051.705096] FAST spr round 3 (radius: 25)
[01:04:43 -4043.299294] FAST spr round 4 (radius: 25)
[01:06:01 -4042.619642] FAST spr round 5 (radius: 25)
[01:07:17 -4042.619604] Model parameter optimization (eps = 1.000000)
[01:07:30 -4040.429662] SLOW spr round 1 (radius: 5)
[01:08:46 -4039.281004] SLOW spr round 2 (radius: 5)
[01:10:01 -4039.280954] SLOW spr round 3 (radius: 10)
[01:11:20 -4038.610783] SLOW spr round 4 (radius: 5)
[01:12:37 -4036.624597] SLOW spr round 5 (radius: 5)
[01:13:52 -4034.387823] SLOW spr round 6 (radius: 5)
[01:15:05 -4034.387318] SLOW spr round 7 (radius: 10)
[01:16:23 -4034.387310] SLOW spr round 8 (radius: 15)
[01:17:47 -4034.034890] SLOW spr round 9 (radius: 5)
[01:19:08 -3981.992037] SLOW spr round 10 (radius: 5)
[01:20:23 -3980.650182] SLOW spr round 11 (radius: 5)
[01:21:36 -3980.650177] SLOW spr round 12 (radius: 10)
[01:22:54 -3980.650177] SLOW spr round 13 (radius: 15)
[01:24:18 -3980.650177] SLOW spr round 14 (radius: 20)
[01:26:02 -3980.291991] SLOW spr round 15 (radius: 5)
[01:27:23 -3970.977177] SLOW spr round 16 (radius: 5)
[01:28:37 -3970.977126] SLOW spr round 17 (radius: 10)
[01:29:55 -3970.977126] SLOW spr round 18 (radius: 15)
[01:31:18 -3970.977126] SLOW spr round 19 (radius: 20)
[01:32:59 -3970.977126] SLOW spr round 20 (radius: 25)
[01:34:59 -3969.855377] SLOW spr round 21 (radius: 5)
[01:36:20 -3965.455483] SLOW spr round 22 (radius: 5)
[01:37:34 -3965.455481] SLOW spr round 23 (radius: 10)
[01:38:53 -3950.532482] SLOW spr round 24 (radius: 5)
[01:40:10 -3925.205445] SLOW spr round 25 (radius: 5)
[01:41:24 -3920.151117] SLOW spr round 26 (radius: 5)
[01:42:37 -3920.151110] SLOW spr round 27 (radius: 10)
[01:43:55 -3920.151081] SLOW spr round 28 (radius: 15)
[01:45:21 -3920.151081] SLOW spr round 29 (radius: 20)
[01:47:09 -3919.882907] SLOW spr round 30 (radius: 5)
[01:48:29 -3919.882906] SLOW spr round 31 (radius: 10)
[01:49:47 -3919.882906] SLOW spr round 32 (radius: 15)
[01:51:12 -3919.882906] SLOW spr round 33 (radius: 20)
[01:53:00 -3919.882906] SLOW spr round 34 (radius: 25)
[01:55:12 -3919.882906] Model parameter optimization (eps = 0.100000)

[01:55:20] ML tree search #2, logLikelihood: -3919.754947

[01:55:21 -44684.399453] Initial branch length optimization
[01:55:22 -35843.432652] Model parameter optimization (eps = 10.000000)
[01:55:38 -35641.295811] AUTODETECT spr round 1 (radius: 5)
[01:57:01 -16833.867253] AUTODETECT spr round 2 (radius: 10)
[01:58:20 -10682.944470] AUTODETECT spr round 3 (radius: 15)
[01:59:45 -7807.529237] AUTODETECT spr round 4 (radius: 20)
[02:01:22 -6083.119626] AUTODETECT spr round 5 (radius: 25)
[02:03:16 -5322.922729] SPR radius for FAST iterations: 25 (autodetect)
[02:03:16 -5322.922729] Model parameter optimization (eps = 3.000000)
[02:03:31 -5314.408057] FAST spr round 1 (radius: 25)
[02:04:54 -4042.062549] FAST spr round 2 (radius: 25)
[02:06:14 -3962.619728] FAST spr round 3 (radius: 25)
[02:07:30 -3957.015690] FAST spr round 4 (radius: 25)
[02:08:45 -3956.046462] FAST spr round 5 (radius: 25)
[02:10:00 -3956.046328] Model parameter optimization (eps = 1.000000)
[02:10:18 -3950.406478] SLOW spr round 1 (radius: 5)
[02:11:32 -3949.397879] SLOW spr round 2 (radius: 5)
[02:12:47 -3949.380646] SLOW spr round 3 (radius: 10)
[02:14:07 -3940.457604] SLOW spr round 4 (radius: 5)
[02:15:24 -3940.217469] SLOW spr round 5 (radius: 5)
[02:16:39 -3940.214188] SLOW spr round 6 (radius: 10)
[02:17:59 -3938.889657] SLOW spr round 7 (radius: 5)
[02:19:13 -3938.889629] SLOW spr round 8 (radius: 10)
[02:20:32 -3935.723546] SLOW spr round 9 (radius: 5)
[02:21:48 -3935.723123] SLOW spr round 10 (radius: 10)
[02:23:06 -3935.723093] SLOW spr round 11 (radius: 15)
[02:24:32 -3931.309475] SLOW spr round 12 (radius: 5)
[02:25:54 -3928.299116] SLOW spr round 13 (radius: 5)
[02:27:10 -3928.294623] SLOW spr round 14 (radius: 10)
[02:28:29 -3928.294562] SLOW spr round 15 (radius: 15)
[02:29:53 -3927.978553] SLOW spr round 16 (radius: 5)
[02:31:12 -3927.978465] SLOW spr round 17 (radius: 10)
[02:32:31 -3927.978455] SLOW spr round 18 (radius: 15)
[02:33:54 -3927.978453] SLOW spr round 19 (radius: 20)
[02:35:32 -3927.463118] SLOW spr round 20 (radius: 5)
[02:36:54 -3925.726296] SLOW spr round 21 (radius: 5)
[02:38:09 -3925.724020] SLOW spr round 22 (radius: 10)
[02:39:28 -3925.723740] SLOW spr round 23 (radius: 15)
[02:40:52 -3925.723681] SLOW spr round 24 (radius: 20)
[02:42:33 -3925.723664] SLOW spr round 25 (radius: 25)
[02:44:29 -3924.691201] SLOW spr round 26 (radius: 5)
[02:45:52 -3924.690427] SLOW spr round 27 (radius: 10)
[02:47:13 -3924.690247] SLOW spr round 28 (radius: 15)
[02:48:37 -3924.690205] SLOW spr round 29 (radius: 20)
[02:50:18 -3924.690195] SLOW spr round 30 (radius: 25)
[02:52:13 -3924.690190] Model parameter optimization (eps = 0.100000)

[02:52:23] ML tree search #3, logLikelihood: -3923.778514

[02:52:23 -45307.491829] Initial branch length optimization
[02:52:24 -36394.928241] Model parameter optimization (eps = 10.000000)
[02:52:40 -36196.385459] AUTODETECT spr round 1 (radius: 5)
[02:54:03 -16400.999240] AUTODETECT spr round 2 (radius: 10)
[02:55:22 -10496.524990] AUTODETECT spr round 3 (radius: 15)
[02:56:45 -8053.997732] AUTODETECT spr round 4 (radius: 20)
[02:58:18 -6663.357353] AUTODETECT spr round 5 (radius: 25)
[02:59:58 -5236.934730] SPR radius for FAST iterations: 25 (autodetect)
[02:59:58 -5236.934730] Model parameter optimization (eps = 3.000000)
[03:00:11 -5233.219538] FAST spr round 1 (radius: 25)
[03:01:36 -4219.579371] FAST spr round 2 (radius: 25)
[03:02:58 -4164.275810] FAST spr round 3 (radius: 25)
[03:04:18 -4161.419125] FAST spr round 4 (radius: 25)
[03:05:35 -4161.418928] Model parameter optimization (eps = 1.000000)
[03:05:51 -4158.091647] SLOW spr round 1 (radius: 5)
[03:07:09 -4157.886261] SLOW spr round 2 (radius: 5)
[03:08:27 -4157.879392] SLOW spr round 3 (radius: 10)
[03:09:49 -4156.084209] SLOW spr round 4 (radius: 5)
[03:11:08 -4154.523659] SLOW spr round 5 (radius: 5)
[03:12:25 -4154.523281] SLOW spr round 6 (radius: 10)
[03:13:46 -4154.523265] SLOW spr round 7 (radius: 15)
[03:15:16 -4016.269347] SLOW spr round 8 (radius: 5)
[03:16:39 -3944.722665] SLOW spr round 9 (radius: 5)
[03:17:58 -3939.613593] SLOW spr round 10 (radius: 5)
[03:19:15 -3939.613523] SLOW spr round 11 (radius: 10)
[03:20:37 -3927.181874] SLOW spr round 12 (radius: 5)
[03:21:54 -3927.181851] SLOW spr round 13 (radius: 10)
[03:23:15 -3927.181850] SLOW spr round 14 (radius: 15)
[03:24:41 -3925.749862] SLOW spr round 15 (radius: 5)
[03:26:01 -3925.749814] SLOW spr round 16 (radius: 10)
[03:27:22 -3925.749813] SLOW spr round 17 (radius: 15)
[03:28:47 -3925.749812] SLOW spr round 18 (radius: 20)
[03:30:23 -3925.658626] SLOW spr round 19 (radius: 25)
[03:32:13 -3925.389699] SLOW spr round 20 (radius: 5)
[03:33:37 -3925.389697] SLOW spr round 21 (radius: 10)
[03:34:59 -3925.389696] SLOW spr round 22 (radius: 15)
[03:36:24 -3925.389695] SLOW spr round 23 (radius: 20)
[03:38:00 -3925.389694] SLOW spr round 24 (radius: 25)
[03:39:50 -3925.389692] Model parameter optimization (eps = 0.100000)

[03:40:01] ML tree search #4, logLikelihood: -3924.868987

[03:40:01 -45633.786397] Initial branch length optimization
[03:40:02 -36251.429490] Model parameter optimization (eps = 10.000000)
[03:40:18 -36048.324372] AUTODETECT spr round 1 (radius: 5)
[03:41:39 -15941.141540] AUTODETECT spr round 2 (radius: 10)
[03:42:57 -9657.224515] AUTODETECT spr round 3 (radius: 15)
[03:44:22 -7445.814439] AUTODETECT spr round 4 (radius: 20)
[03:45:53 -6220.405643] AUTODETECT spr round 5 (radius: 25)
[03:47:29 -5954.815954] SPR radius for FAST iterations: 25 (autodetect)
[03:47:29 -5954.815954] Model parameter optimization (eps = 3.000000)
[03:47:42 -5951.696123] FAST spr round 1 (radius: 25)
[03:49:00 -4910.245410] FAST spr round 2 (radius: 25)
[03:50:16 -4712.475643] FAST spr round 3 (radius: 25)
[03:51:34 -4570.248377] FAST spr round 4 (radius: 25)
[03:52:49 -4563.457658] FAST spr round 5 (radius: 25)
[03:54:03 -4528.729439] FAST spr round 6 (radius: 25)
[03:55:18 -4523.525151] FAST spr round 7 (radius: 25)
[03:56:32 -4521.262931] FAST spr round 8 (radius: 25)
[03:57:46 -4521.262846] Model parameter optimization (eps = 1.000000)
[03:57:59 -4517.728764] SLOW spr round 1 (radius: 5)
[03:59:15 -4513.453688] SLOW spr round 2 (radius: 5)
[04:00:30 -4511.722063] SLOW spr round 3 (radius: 5)
[04:01:44 -4511.720765] SLOW spr round 4 (radius: 10)
[04:03:06 -4462.766394] SLOW spr round 5 (radius: 5)
[04:04:26 -4452.088868] SLOW spr round 6 (radius: 5)
[04:05:41 -4452.088787] SLOW spr round 7 (radius: 10)
[04:07:01 -4448.355039] SLOW spr round 8 (radius: 5)
[04:08:20 -4447.869249] SLOW spr round 9 (radius: 5)
[04:09:34 -4447.869244] SLOW spr round 10 (radius: 10)
[04:10:55 -4445.319637] SLOW spr round 11 (radius: 5)
[04:12:13 -4445.319621] SLOW spr round 12 (radius: 10)
[04:13:33 -4445.319620] SLOW spr round 13 (radius: 15)
[04:15:03 -4403.027366] SLOW spr round 14 (radius: 5)
[04:16:28 -4388.636827] SLOW spr round 15 (radius: 5)
[04:17:44 -4386.889783] SLOW spr round 16 (radius: 5)
[04:18:59 -4386.889689] SLOW spr round 17 (radius: 10)
[04:20:21 -4279.815067] SLOW spr round 18 (radius: 5)
[04:21:41 -4277.143707] SLOW spr round 19 (radius: 5)
[04:22:56 -4277.143584] SLOW spr round 20 (radius: 10)
[04:24:16 -4277.143576] SLOW spr round 21 (radius: 15)
[04:25:42 -4271.510942] SLOW spr round 22 (radius: 5)
[04:27:05 -4237.149746] SLOW spr round 23 (radius: 5)
[04:28:23 -4236.843734] SLOW spr round 24 (radius: 5)
[04:29:37 -4236.843714] SLOW spr round 25 (radius: 10)
[04:30:58 -4236.102084] SLOW spr round 26 (radius: 5)
[04:32:15 -4236.102068] SLOW spr round 27 (radius: 10)
[04:33:35 -4234.844892] SLOW spr round 28 (radius: 5)
[04:34:52 -4234.844833] SLOW spr round 29 (radius: 10)
[04:36:12 -4234.844832] SLOW spr round 30 (radius: 15)
[04:37:42 -4185.810705] SLOW spr round 31 (radius: 5)
[04:39:05 -4176.427980] SLOW spr round 32 (radius: 5)
[04:40:22 -4176.340650] SLOW spr round 33 (radius: 10)
[04:41:43 -4173.392246] SLOW spr round 34 (radius: 5)
[04:42:59 -4173.392171] SLOW spr round 35 (radius: 10)
[04:44:19 -4173.392160] SLOW spr round 36 (radius: 15)
[04:45:47 -4160.712612] SLOW spr round 37 (radius: 5)
[04:47:09 -4160.355560] SLOW spr round 38 (radius: 5)
[04:48:25 -4160.355519] SLOW spr round 39 (radius: 10)
[04:49:45 -4159.688184] SLOW spr round 40 (radius: 5)
[04:51:01 -4159.687774] SLOW spr round 41 (radius: 10)
[04:52:22 -4159.687774] SLOW spr round 42 (radius: 15)
[04:53:49 -4159.687773] SLOW spr round 43 (radius: 20)
[04:55:32 -4143.419580] SLOW spr round 44 (radius: 5)
[04:56:57 -4047.537948] SLOW spr round 45 (radius: 5)
[04:58:15 -4012.641924] SLOW spr round 46 (radius: 5)
[04:59:31 -4012.641817] SLOW spr round 47 (radius: 10)
[05:00:51 -4012.460973] SLOW spr round 48 (radius: 5)
[05:02:08 -4012.460961] SLOW spr round 49 (radius: 10)
[05:03:28 -4012.460961] SLOW spr round 50 (radius: 15)
[05:04:57 -3987.373764] SLOW spr round 51 (radius: 5)
[05:06:19 -3977.903939] SLOW spr round 52 (radius: 5)
[05:07:36 -3969.027975] SLOW spr round 53 (radius: 5)
[05:08:51 -3969.027491] SLOW spr round 54 (radius: 10)
[05:10:12 -3969.027412] SLOW spr round 55 (radius: 15)
[05:11:39 -3969.027393] SLOW spr round 56 (radius: 20)
[05:13:17 -3968.823579] SLOW spr round 57 (radius: 5)
[05:14:40 -3968.823553] SLOW spr round 58 (radius: 10)
[05:16:02 -3966.040041] SLOW spr round 59 (radius: 5)
[05:17:18 -3966.040040] SLOW spr round 60 (radius: 10)
[05:18:39 -3966.040038] SLOW spr round 61 (radius: 15)
[05:20:04 -3966.040038] SLOW spr round 62 (radius: 20)
[05:21:42 -3966.040038] SLOW spr round 63 (radius: 25)
[05:23:40 -3966.040038] Model parameter optimization (eps = 0.100000)

[05:23:55] ML tree search #5, logLikelihood: -3963.111457

[05:23:55 -45386.983551] Initial branch length optimization
[05:23:57 -36067.828808] Model parameter optimization (eps = 10.000000)
[05:24:15 -35900.765672] AUTODETECT spr round 1 (radius: 5)
[05:25:39 -16395.438352] AUTODETECT spr round 2 (radius: 10)
[05:26:58 -10695.850254] AUTODETECT spr round 3 (radius: 15)
[05:28:23 -7628.073922] AUTODETECT spr round 4 (radius: 20)
[05:29:57 -6206.019199] AUTODETECT spr round 5 (radius: 25)
[05:31:42 -5337.446937] SPR radius for FAST iterations: 25 (autodetect)
[05:31:42 -5337.446937] Model parameter optimization (eps = 3.000000)
[05:31:51 -5336.514958] FAST spr round 1 (radius: 25)
[05:33:12 -4303.105025] FAST spr round 2 (radius: 25)
[05:34:30 -4273.277202] FAST spr round 3 (radius: 25)
[05:35:48 -4270.205977] FAST spr round 4 (radius: 25)
[05:37:04 -4269.114551] FAST spr round 5 (radius: 25)
[05:38:18 -4269.112882] Model parameter optimization (eps = 1.000000)
[05:38:30 -4267.468088] SLOW spr round 1 (radius: 5)
[05:39:46 -4266.774176] SLOW spr round 2 (radius: 5)
[05:41:01 -4266.773115] SLOW spr round 3 (radius: 10)
[05:42:21 -4266.117847] SLOW spr round 4 (radius: 5)
[05:43:39 -4264.981421] SLOW spr round 5 (radius: 5)
[05:44:53 -4264.981267] SLOW spr round 6 (radius: 10)
[05:46:13 -4264.738301] SLOW spr round 7 (radius: 5)
[05:47:30 -4264.738133] SLOW spr round 8 (radius: 10)
[05:48:49 -4264.738036] SLOW spr round 9 (radius: 15)
[05:50:18 -4222.761351] SLOW spr round 10 (radius: 5)
[05:51:41 -4220.934716] SLOW spr round 11 (radius: 5)
[05:52:57 -4220.934269] SLOW spr round 12 (radius: 10)
[05:54:18 -4220.302807] SLOW spr round 13 (radius: 5)
[05:55:36 -4220.302380] SLOW spr round 14 (radius: 10)
[05:56:58 -4220.302162] SLOW spr round 15 (radius: 15)
[05:58:24 -4215.731153] SLOW spr round 16 (radius: 5)
[05:59:46 -4215.731019] SLOW spr round 17 (radius: 10)
[06:01:06 -4215.730935] SLOW spr round 18 (radius: 15)
[06:02:30 -4215.730878] SLOW spr round 19 (radius: 20)
[06:04:08 -4187.448450] SLOW spr round 20 (radius: 5)
[06:05:32 -4172.788701] SLOW spr round 21 (radius: 5)
[06:06:51 -4170.169487] SLOW spr round 22 (radius: 5)
[06:08:07 -4170.169254] SLOW spr round 23 (radius: 10)
[06:09:29 -4170.169186] SLOW spr round 24 (radius: 15)
[06:10:52 -4170.169182] SLOW spr round 25 (radius: 20)
[06:12:24 -4170.169155] SLOW spr round 26 (radius: 25)
[06:14:09 -4169.947453] SLOW spr round 27 (radius: 5)
[06:15:33 -4169.947396] SLOW spr round 28 (radius: 10)
[06:16:54 -4169.947393] SLOW spr round 29 (radius: 15)
[06:18:17 -4169.947393] SLOW spr round 30 (radius: 20)
[06:19:49 -4169.947393] SLOW spr round 31 (radius: 25)
[06:21:32 -4169.947392] Model parameter optimization (eps = 0.100000)

[06:21:45] ML tree search #6, logLikelihood: -4168.888041

[06:21:45 -45757.066567] Initial branch length optimization
[06:21:47 -36525.315735] Model parameter optimization (eps = 10.000000)
[06:22:03 -36351.083586] AUTODETECT spr round 1 (radius: 5)
[06:23:27 -16568.790848] AUTODETECT spr round 2 (radius: 10)
[06:24:47 -10034.618922] AUTODETECT spr round 3 (radius: 15)
[06:26:12 -7426.355873] AUTODETECT spr round 4 (radius: 20)
[06:27:44 -6162.648751] AUTODETECT spr round 5 (radius: 25)
[06:29:24 -5739.971357] SPR radius for FAST iterations: 25 (autodetect)
[06:29:24 -5739.971357] Model parameter optimization (eps = 3.000000)
[06:29:42 -5733.214425] FAST spr round 1 (radius: 25)
[06:31:08 -4515.554663] FAST spr round 2 (radius: 25)
[06:32:29 -4487.729485] FAST spr round 3 (radius: 25)
[06:33:47 -4485.526532] FAST spr round 4 (radius: 25)
[06:35:05 -4485.526365] Model parameter optimization (eps = 1.000000)
[06:35:18 -4482.372408] SLOW spr round 1 (radius: 5)
[06:36:35 -4481.715151] SLOW spr round 2 (radius: 5)
[06:37:52 -4481.708598] SLOW spr round 3 (radius: 10)
[06:39:12 -4480.576856] SLOW spr round 4 (radius: 5)
[06:40:32 -4480.178584] SLOW spr round 5 (radius: 5)
[06:41:47 -4480.178557] SLOW spr round 6 (radius: 10)
[06:43:07 -4480.178554] SLOW spr round 7 (radius: 15)
[06:44:33 -4476.314582] SLOW spr round 8 (radius: 5)
[06:45:56 -4473.881908] SLOW spr round 9 (radius: 5)
[06:47:14 -4471.154836] SLOW spr round 10 (radius: 5)
[06:48:30 -4471.154762] SLOW spr round 11 (radius: 10)
[06:49:49 -4471.154761] SLOW spr round 12 (radius: 15)
[06:51:15 -4470.239979] SLOW spr round 13 (radius: 5)
[06:52:36 -4470.239778] SLOW spr round 14 (radius: 10)
[06:53:56 -4470.239778] SLOW spr round 15 (radius: 15)
[06:55:21 -4470.239778] SLOW spr round 16 (radius: 20)
[06:56:59 -4470.239755] SLOW spr round 17 (radius: 25)
[06:58:44 -4469.930441] SLOW spr round 18 (radius: 5)
[07:00:08 -4469.643943] SLOW spr round 19 (radius: 5)
[07:01:25 -4469.643939] SLOW spr round 20 (radius: 10)
[07:02:45 -4469.643908] SLOW spr round 21 (radius: 15)
[07:04:10 -4469.643903] SLOW spr round 22 (radius: 20)
[07:05:45 -4469.643903] SLOW spr round 23 (radius: 25)
[07:07:28 -4469.643903] Model parameter optimization (eps = 0.100000)

[07:07:35] ML tree search #7, logLikelihood: -4469.205340

[07:07:35 -44916.515302] Initial branch length optimization
[07:07:37 -35914.124152] Model parameter optimization (eps = 10.000000)
[07:07:54 -35747.972117] AUTODETECT spr round 1 (radius: 5)
[07:09:18 -15762.725246] AUTODETECT spr round 2 (radius: 10)
[07:10:35 -10096.461536] AUTODETECT spr round 3 (radius: 15)
[07:11:58 -7770.283720] AUTODETECT spr round 4 (radius: 20)
[07:13:31 -6748.056681] AUTODETECT spr round 5 (radius: 25)
[07:15:17 -5679.502936] SPR radius for FAST iterations: 25 (autodetect)
[07:15:17 -5679.502936] Model parameter optimization (eps = 3.000000)
[07:15:25 -5677.916420] FAST spr round 1 (radius: 25)
[07:16:51 -4309.380275] FAST spr round 2 (radius: 25)
[07:18:10 -4079.068526] FAST spr round 3 (radius: 25)
[07:19:30 -4062.347426] FAST spr round 4 (radius: 25)
[07:20:51 -4053.853731] FAST spr round 5 (radius: 25)
[07:22:08 -4053.851866] Model parameter optimization (eps = 1.000000)
[07:22:22 -4051.668136] SLOW spr round 1 (radius: 5)
[07:23:39 -4051.132329] SLOW spr round 2 (radius: 5)
[07:24:54 -4051.131498] SLOW spr round 3 (radius: 10)
[07:26:15 -4049.663709] SLOW spr round 4 (radius: 5)
[07:27:33 -4045.453793] SLOW spr round 5 (radius: 5)
[07:28:50 -4041.549831] SLOW spr round 6 (radius: 5)
[07:30:05 -4041.548103] SLOW spr round 7 (radius: 10)
[07:31:27 -4035.077290] SLOW spr round 8 (radius: 5)
[07:32:44 -4035.077287] SLOW spr round 9 (radius: 10)
[07:34:03 -4035.077286] SLOW spr round 10 (radius: 15)
[07:35:32 -4006.310101] SLOW spr round 11 (radius: 5)
[07:36:55 -3987.766466] SLOW spr round 12 (radius: 5)
[07:38:13 -3987.765255] SLOW spr round 13 (radius: 10)
[07:39:33 -3987.765216] SLOW spr round 14 (radius: 15)
[07:40:57 -3987.765207] SLOW spr round 15 (radius: 20)
[07:42:38 -3986.768429] SLOW spr round 16 (radius: 5)
[07:44:02 -3982.611938] SLOW spr round 17 (radius: 5)
[07:45:20 -3982.031304] SLOW spr round 18 (radius: 5)
[07:46:35 -3982.030909] SLOW spr round 19 (radius: 10)
[07:47:55 -3982.030899] SLOW spr round 20 (radius: 15)
[07:49:19 -3982.030887] SLOW spr round 21 (radius: 20)
[07:50:59 -3982.030886] SLOW spr round 22 (radius: 25)
[07:52:57 -3934.546172] SLOW spr round 23 (radius: 5)
[07:54:21 -3933.248562] SLOW spr round 24 (radius: 5)
[07:55:40 -3932.778339] SLOW spr round 25 (radius: 5)
[07:56:55 -3932.778270] SLOW spr round 26 (radius: 10)
[07:58:15 -3932.778263] SLOW spr round 27 (radius: 15)
[07:59:39 -3932.778262] SLOW spr round 28 (radius: 20)
[08:01:20 -3926.792772] SLOW spr round 29 (radius: 5)
[08:02:43 -3926.705929] SLOW spr round 30 (radius: 10)
[08:04:03 -3926.705402] SLOW spr round 31 (radius: 15)
[08:05:28 -3926.705280] SLOW spr round 32 (radius: 20)
[08:07:05 -3926.705268] SLOW spr round 33 (radius: 25)
[08:08:56 -3926.124312] SLOW spr round 34 (radius: 5)
[08:10:20 -3926.111054] SLOW spr round 35 (radius: 10)
[08:11:40 -3926.111050] SLOW spr round 36 (radius: 15)
[08:13:05 -3926.111049] SLOW spr round 37 (radius: 20)
[08:14:46 -3926.111047] SLOW spr round 38 (radius: 25)
[08:16:53 -3926.111046] Model parameter optimization (eps = 0.100000)

[08:17:06] ML tree search #8, logLikelihood: -3924.536748

[08:17:07 -44921.614403] Initial branch length optimization
[08:17:09 -36206.579041] Model parameter optimization (eps = 10.000000)
[08:17:24 -36014.235018] AUTODETECT spr round 1 (radius: 5)
[08:18:46 -15954.341282] AUTODETECT spr round 2 (radius: 10)
[08:20:05 -9698.462284] AUTODETECT spr round 3 (radius: 15)
[08:21:29 -7365.460582] AUTODETECT spr round 4 (radius: 20)
[08:23:04 -5955.735229] AUTODETECT spr round 5 (radius: 25)
[08:24:48 -5451.821779] SPR radius for FAST iterations: 25 (autodetect)
[08:24:48 -5451.821779] Model parameter optimization (eps = 3.000000)
[08:24:57 -5450.378843] FAST spr round 1 (radius: 25)
[08:26:24 -4186.360120] FAST spr round 2 (radius: 25)
[08:27:46 -4002.527674] FAST spr round 3 (radius: 25)
[08:29:07 -3994.857488] FAST spr round 4 (radius: 25)
[08:30:25 -3991.414855] FAST spr round 5 (radius: 25)
[08:31:42 -3991.413610] Model parameter optimization (eps = 1.000000)
[08:31:57 -3986.121969] SLOW spr round 1 (radius: 5)
[08:33:13 -3985.890331] SLOW spr round 2 (radius: 5)
[08:34:28 -3985.700117] SLOW spr round 3 (radius: 5)
[08:35:42 -3985.700057] SLOW spr round 4 (radius: 10)
[08:37:02 -3985.700011] SLOW spr round 5 (radius: 15)
[08:38:31 -3954.248078] SLOW spr round 6 (radius: 5)
[08:39:53 -3952.750902] SLOW spr round 7 (radius: 5)
[08:41:08 -3952.097452] SLOW spr round 8 (radius: 5)
[08:42:21 -3952.097422] SLOW spr round 9 (radius: 10)
[08:43:41 -3947.249405] SLOW spr round 10 (radius: 5)
[08:44:57 -3947.248142] SLOW spr round 11 (radius: 10)
[08:46:17 -3947.248066] SLOW spr round 12 (radius: 15)
[08:47:46 -3946.889650] SLOW spr round 13 (radius: 5)
[08:49:05 -3946.889646] SLOW spr round 14 (radius: 10)
[08:50:26 -3946.889646] SLOW spr round 15 (radius: 15)
[08:51:52 -3946.889646] SLOW spr round 16 (radius: 20)
[08:53:42 -3939.609000] SLOW spr round 17 (radius: 5)
[08:55:05 -3936.391382] SLOW spr round 18 (radius: 5)
[08:56:20 -3936.391028] SLOW spr round 19 (radius: 10)
[08:57:40 -3936.013322] SLOW spr round 20 (radius: 5)
[08:58:55 -3936.013311] SLOW spr round 21 (radius: 10)
[09:00:14 -3936.013311] SLOW spr round 22 (radius: 15)
[09:01:40 -3936.013261] SLOW spr round 23 (radius: 20)
[09:03:21 -3936.013261] SLOW spr round 24 (radius: 25)
[09:05:19 -3924.542589] SLOW spr round 25 (radius: 5)
[09:06:42 -3922.432598] SLOW spr round 26 (radius: 5)
[09:07:58 -3922.398809] SLOW spr round 27 (radius: 10)
[09:09:17 -3922.356066] SLOW spr round 28 (radius: 15)
[09:10:45 -3910.003851] SLOW spr round 29 (radius: 5)
[09:12:04 -3910.003730] SLOW spr round 30 (radius: 10)
[09:13:24 -3910.003727] SLOW spr round 31 (radius: 15)
[09:14:49 -3910.003724] SLOW spr round 32 (radius: 20)
[09:16:30 -3910.003724] SLOW spr round 33 (radius: 25)
[09:18:24 -3910.003724] Model parameter optimization (eps = 0.100000)

[09:18:31] ML tree search #9, logLikelihood: -3909.906674

[09:18:31 -45276.691832] Initial branch length optimization
[09:18:33 -36144.833294] Model parameter optimization (eps = 10.000000)
[09:18:53 -35970.444884] AUTODETECT spr round 1 (radius: 5)
[09:20:18 -15864.417891] AUTODETECT spr round 2 (radius: 10)
[09:21:37 -10271.748739] AUTODETECT spr round 3 (radius: 15)
[09:23:02 -8110.274704] AUTODETECT spr round 4 (radius: 20)
[09:24:37 -6703.519743] AUTODETECT spr round 5 (radius: 25)
[09:26:20 -6056.604202] SPR radius for FAST iterations: 25 (autodetect)
[09:26:20 -6056.604202] Model parameter optimization (eps = 3.000000)
[09:26:35 -6049.481604] FAST spr round 1 (radius: 25)
[09:27:59 -4477.336522] FAST spr round 2 (radius: 25)
[09:29:20 -4215.768731] FAST spr round 3 (radius: 25)
[09:30:41 -4168.847541] FAST spr round 4 (radius: 25)
[09:32:00 -4161.439843] FAST spr round 5 (radius: 25)
[09:33:19 -4148.884514] FAST spr round 6 (radius: 25)
[09:34:36 -4148.884513] Model parameter optimization (eps = 1.000000)
[09:34:49 -4145.453266] SLOW spr round 1 (radius: 5)
[09:36:05 -4144.776320] SLOW spr round 2 (radius: 5)
[09:37:21 -4144.775666] SLOW spr round 3 (radius: 10)
[09:38:44 -4083.761729] SLOW spr round 4 (radius: 5)
[09:40:03 -4074.367769] SLOW spr round 5 (radius: 5)
[09:41:20 -4070.368443] SLOW spr round 6 (radius: 5)
[09:42:37 -4070.300515] SLOW spr round 7 (radius: 10)
[09:44:01 -4051.410454] SLOW spr round 8 (radius: 5)
[09:45:19 -4049.630139] SLOW spr round 9 (radius: 5)
[09:46:38 -4049.607274] SLOW spr round 10 (radius: 10)
[09:48:02 -4049.606119] SLOW spr round 11 (radius: 15)
[09:49:31 -4046.694754] SLOW spr round 12 (radius: 5)
[09:50:54 -4046.271130] SLOW spr round 13 (radius: 5)
[09:52:13 -4046.270967] SLOW spr round 14 (radius: 10)
[09:53:37 -4046.270856] SLOW spr round 15 (radius: 15)
[09:55:05 -4046.270733] SLOW spr round 16 (radius: 20)
[09:56:42 -4045.162952] SLOW spr round 17 (radius: 5)
[09:58:05 -4045.162909] SLOW spr round 18 (radius: 10)
[09:59:28 -4045.162866] SLOW spr round 19 (radius: 15)
[10:00:55 -4045.162847] SLOW spr round 20 (radius: 20)
[10:02:31 -4045.162837] SLOW spr round 21 (radius: 25)
[10:04:15 -4044.883835] SLOW spr round 22 (radius: 5)
[10:05:40 -4044.883724] SLOW spr round 23 (radius: 10)
[10:07:03 -4044.883712] SLOW spr round 24 (radius: 15)
[10:08:29 -4044.883708] SLOW spr round 25 (radius: 20)
[10:10:07 -4044.552610] SLOW spr round 26 (radius: 5)
[10:11:29 -4044.552521] SLOW spr round 27 (radius: 10)
[10:12:52 -4044.552493] SLOW spr round 28 (radius: 15)
[10:14:18 -4044.552477] SLOW spr round 29 (radius: 20)
[10:15:56 -4044.552465] SLOW spr round 30 (radius: 25)
[10:17:39 -4042.385857] SLOW spr round 31 (radius: 5)
[10:19:04 -4042.095538] SLOW spr round 32 (radius: 5)
[10:20:22 -4042.094786] SLOW spr round 33 (radius: 10)
[10:21:46 -4007.506181] SLOW spr round 34 (radius: 5)
[10:23:04 -3979.088780] SLOW spr round 35 (radius: 5)
[10:24:22 -3979.087401] SLOW spr round 36 (radius: 10)
[10:25:42 -3979.074765] SLOW spr round 37 (radius: 15)
[10:27:09 -3979.074438] SLOW spr round 38 (radius: 20)
[10:28:48 -3979.074298] SLOW spr round 39 (radius: 25)
[10:30:34 -3979.074224] Model parameter optimization (eps = 0.100000)

[10:30:45] ML tree search #10, logLikelihood: -3978.779873

[10:30:45 -45941.285440] Initial branch length optimization
[10:30:47 -36860.412958] Model parameter optimization (eps = 10.000000)
[10:31:02 -36683.404618] AUTODETECT spr round 1 (radius: 5)
[10:32:26 -17516.544756] AUTODETECT spr round 2 (radius: 10)
[10:33:45 -10696.633449] AUTODETECT spr round 3 (radius: 15)
[10:35:12 -7765.677207] AUTODETECT spr round 4 (radius: 20)
[10:36:43 -6380.056254] AUTODETECT spr round 5 (radius: 25)
[10:38:21 -5842.429115] SPR radius for FAST iterations: 25 (autodetect)
[10:38:21 -5842.429115] Model parameter optimization (eps = 3.000000)
[10:38:31 -5840.118642] FAST spr round 1 (radius: 25)
[10:39:54 -4246.437452] FAST spr round 2 (radius: 25)
[10:41:13 -4083.392436] FAST spr round 3 (radius: 25)
[10:42:31 -4024.173783] FAST spr round 4 (radius: 25)
[10:43:48 -4002.050037] FAST spr round 5 (radius: 25)
[10:45:02 -4002.049934] Model parameter optimization (eps = 1.000000)
[10:45:15 -3999.554392] SLOW spr round 1 (radius: 5)
[10:46:29 -3999.367549] SLOW spr round 2 (radius: 5)
[10:47:42 -3999.305312] SLOW spr round 3 (radius: 10)
[10:49:03 -3969.289541] SLOW spr round 4 (radius: 5)
[10:50:21 -3959.085110] SLOW spr round 5 (radius: 5)
[10:51:36 -3958.513199] SLOW spr round 6 (radius: 5)
[10:52:49 -3958.512992] SLOW spr round 7 (radius: 10)
[10:54:09 -3957.917291] SLOW spr round 8 (radius: 5)
[10:55:24 -3957.917291] SLOW spr round 9 (radius: 10)
[10:56:44 -3957.917288] SLOW spr round 10 (radius: 15)
[10:58:12 -3954.069526] SLOW spr round 11 (radius: 5)
[10:59:32 -3953.420222] SLOW spr round 12 (radius: 5)
[11:00:46 -3953.420181] SLOW spr round 13 (radius: 10)
[11:02:05 -3953.320710] SLOW spr round 14 (radius: 15)
[11:03:30 -3952.257091] SLOW spr round 15 (radius: 5)
[11:04:50 -3951.855456] SLOW spr round 16 (radius: 5)
[11:06:03 -3951.855437] SLOW spr round 17 (radius: 10)
[11:07:25 -3947.652949] SLOW spr round 18 (radius: 5)
[11:08:41 -3947.565666] SLOW spr round 19 (radius: 10)
[11:10:00 -3947.565129] SLOW spr round 20 (radius: 15)
[11:11:25 -3946.899421] SLOW spr round 21 (radius: 5)
[11:12:46 -3946.899182] SLOW spr round 22 (radius: 10)
[11:14:06 -3946.893478] SLOW spr round 23 (radius: 15)
[11:15:29 -3946.545218] SLOW spr round 24 (radius: 5)
[11:16:48 -3946.545211] SLOW spr round 25 (radius: 10)
[11:18:08 -3946.545204] SLOW spr round 26 (radius: 15)
[11:19:31 -3946.545204] SLOW spr round 27 (radius: 20)
[11:21:08 -3946.545204] SLOW spr round 28 (radius: 25)
[11:23:00 -3941.566282] SLOW spr round 29 (radius: 5)
[11:24:24 -3933.563678] SLOW spr round 30 (radius: 5)
[11:25:39 -3933.563615] SLOW spr round 31 (radius: 10)
[11:26:57 -3933.563615] SLOW spr round 32 (radius: 15)
[11:28:20 -3933.563615] SLOW spr round 33 (radius: 20)
[11:29:58 -3933.563615] SLOW spr round 34 (radius: 25)
[11:31:50 -3933.563615] Model parameter optimization (eps = 0.100000)

[11:32:13] ML tree search #11, logLikelihood: -3931.250130

[11:32:13 -45028.119860] Initial branch length optimization
[11:32:14 -35923.160470] Model parameter optimization (eps = 10.000000)
[11:32:29 -35744.194165] AUTODETECT spr round 1 (radius: 5)
[11:33:53 -16624.513360] AUTODETECT spr round 2 (radius: 10)
[11:35:14 -10586.795371] AUTODETECT spr round 3 (radius: 15)
[11:36:40 -7777.558006] AUTODETECT spr round 4 (radius: 20)
[11:38:13 -6422.602051] AUTODETECT spr round 5 (radius: 25)
[11:39:51 -5956.517547] SPR radius for FAST iterations: 25 (autodetect)
[11:39:51 -5956.517547] Model parameter optimization (eps = 3.000000)
[11:40:00 -5954.651576] FAST spr round 1 (radius: 25)
[11:41:23 -4533.565395] FAST spr round 2 (radius: 25)
[11:42:44 -4265.651181] FAST spr round 3 (radius: 25)
[11:44:04 -4197.852278] FAST spr round 4 (radius: 25)
[11:45:22 -4193.645003] FAST spr round 5 (radius: 25)
[11:46:40 -4192.028279] FAST spr round 6 (radius: 25)
[11:47:57 -4189.436037] FAST spr round 7 (radius: 25)
[11:49:13 -4189.435978] Model parameter optimization (eps = 1.000000)
[11:49:30 -4181.286714] SLOW spr round 1 (radius: 5)
[11:50:45 -4181.121293] SLOW spr round 2 (radius: 5)
[11:51:59 -4181.121210] SLOW spr round 3 (radius: 10)
[11:53:21 -4118.808153] SLOW spr round 4 (radius: 5)
[11:54:38 -4108.487677] SLOW spr round 5 (radius: 5)
[11:55:54 -4108.487373] SLOW spr round 6 (radius: 10)
[11:57:14 -4108.487331] SLOW spr round 7 (radius: 15)
[11:58:41 -4105.033107] SLOW spr round 8 (radius: 5)
[12:00:03 -4105.032994] SLOW spr round 9 (radius: 10)
[12:01:23 -4104.805961] SLOW spr round 10 (radius: 5)
[12:02:39 -4104.805879] SLOW spr round 11 (radius: 10)
[12:03:59 -4104.805877] SLOW spr round 12 (radius: 15)
[12:05:25 -4103.235063] SLOW spr round 13 (radius: 5)
[12:06:47 -4102.115455] SLOW spr round 14 (radius: 5)
[12:08:03 -4102.115321] SLOW spr round 15 (radius: 10)
[12:09:22 -4102.115317] SLOW spr round 16 (radius: 15)
[12:10:48 -4102.115312] SLOW spr round 17 (radius: 20)
[12:12:32 -4101.983123] SLOW spr round 18 (radius: 5)
[12:13:54 -4101.983120] SLOW spr round 19 (radius: 10)
[12:15:14 -4101.983119] SLOW spr round 20 (radius: 15)
[12:16:39 -4101.983117] SLOW spr round 21 (radius: 20)
[12:18:23 -4101.983116] SLOW spr round 22 (radius: 25)
[12:20:24 -4058.383650] SLOW spr round 23 (radius: 5)
[12:21:48 -4044.183032] SLOW spr round 24 (radius: 5)
[12:23:06 -3983.281765] SLOW spr round 25 (radius: 5)
[12:24:23 -3976.089255] SLOW spr round 26 (radius: 5)
[12:25:37 -3976.089209] SLOW spr round 27 (radius: 10)
[12:26:57 -3972.816361] SLOW spr round 28 (radius: 5)
[12:28:13 -3972.816357] SLOW spr round 29 (radius: 10)
[12:29:32 -3972.816342] SLOW spr round 30 (radius: 15)
[12:30:59 -3960.344672] SLOW spr round 31 (radius: 5)
[12:32:18 -3960.344660] SLOW spr round 32 (radius: 10)
[12:33:38 -3960.344658] SLOW spr round 33 (radius: 15)
[12:35:03 -3960.344656] SLOW spr round 34 (radius: 20)
[12:36:44 -3960.037670] SLOW spr round 35 (radius: 5)
[12:38:07 -3934.234698] SLOW spr round 36 (radius: 5)
[12:39:24 -3934.234205] SLOW spr round 37 (radius: 10)
[12:40:44 -3932.070813] SLOW spr round 38 (radius: 5)
[12:42:00 -3931.724487] SLOW spr round 39 (radius: 5)
[12:43:14 -3931.724484] SLOW spr round 40 (radius: 10)
[12:44:34 -3931.724482] SLOW spr round 41 (radius: 15)
[12:45:59 -3931.724480] SLOW spr round 42 (radius: 20)
[12:47:42 -3931.724478] SLOW spr round 43 (radius: 25)
[12:49:40 -3931.724476] Model parameter optimization (eps = 0.100000)

[12:49:52] ML tree search #12, logLikelihood: -3931.472790

[12:49:52 -44990.522137] Initial branch length optimization
[12:49:53 -36016.810002] Model parameter optimization (eps = 10.000000)
[12:50:08 -35827.225209] AUTODETECT spr round 1 (radius: 5)
[12:51:34 -16184.101951] AUTODETECT spr round 2 (radius: 10)
[12:52:53 -9750.416957] AUTODETECT spr round 3 (radius: 15)
[12:54:21 -7226.390159] AUTODETECT spr round 4 (radius: 20)
[12:55:57 -6281.746911] AUTODETECT spr round 5 (radius: 25)
[12:57:46 -5724.392904] SPR radius for FAST iterations: 25 (autodetect)
[12:57:46 -5724.392904] Model parameter optimization (eps = 3.000000)
[12:57:54 -5722.765433] FAST spr round 1 (radius: 25)
[12:59:17 -4348.168156] FAST spr round 2 (radius: 25)
[13:00:36 -4000.503501] FAST spr round 3 (radius: 25)
[13:01:54 -3969.672505] FAST spr round 4 (radius: 25)
[13:03:08 -3969.668882] Model parameter optimization (eps = 1.000000)
[13:03:25 -3966.365025] SLOW spr round 1 (radius: 5)
[13:04:41 -3966.292382] SLOW spr round 2 (radius: 10)
[13:06:02 -3963.741643] SLOW spr round 3 (radius: 5)
[13:07:20 -3960.901825] SLOW spr round 4 (radius: 5)
[13:08:35 -3960.901766] SLOW spr round 5 (radius: 10)
[13:09:55 -3959.762716] SLOW spr round 6 (radius: 5)
[13:11:11 -3959.484473] SLOW spr round 7 (radius: 5)
[13:12:25 -3959.484472] SLOW spr round 8 (radius: 10)
[13:13:44 -3959.484472] SLOW spr round 9 (radius: 15)
[13:15:10 -3954.100574] SLOW spr round 10 (radius: 5)
[13:16:31 -3953.734241] SLOW spr round 11 (radius: 5)
[13:17:46 -3953.733584] SLOW spr round 12 (radius: 10)
[13:19:06 -3953.733483] SLOW spr round 13 (radius: 15)
[13:20:29 -3953.733474] SLOW spr round 14 (radius: 20)
[13:22:11 -3953.733473] SLOW spr round 15 (radius: 25)
[13:24:18 -3953.733473] Model parameter optimization (eps = 0.100000)

[13:24:24] ML tree search #13, logLikelihood: -3953.709242

[13:24:25 -44258.984215] Initial branch length optimization
[13:24:27 -35276.309626] Model parameter optimization (eps = 10.000000)
[13:24:43 -35110.643937] AUTODETECT spr round 1 (radius: 5)
[13:26:07 -16294.835780] AUTODETECT spr round 2 (radius: 10)
[13:27:29 -9927.593652] AUTODETECT spr round 3 (radius: 15)
[13:28:56 -7289.449615] AUTODETECT spr round 4 (radius: 20)
[13:30:32 -6044.606155] AUTODETECT spr round 5 (radius: 25)
[13:32:14 -5668.990974] SPR radius for FAST iterations: 25 (autodetect)
[13:32:14 -5668.990974] Model parameter optimization (eps = 3.000000)
[13:32:26 -5663.645932] FAST spr round 1 (radius: 25)
[13:33:54 -4290.923673] FAST spr round 2 (radius: 25)
[13:35:18 -4043.625760] FAST spr round 3 (radius: 25)
[13:36:41 -4030.212882] FAST spr round 4 (radius: 25)
[13:38:02 -4029.684575] FAST spr round 5 (radius: 25)
[13:39:21 -4029.684572] Model parameter optimization (eps = 1.000000)
[13:39:35 -4025.553956] SLOW spr round 1 (radius: 5)
[13:40:55 -4025.377804] SLOW spr round 2 (radius: 5)
[13:42:14 -4024.988250] SLOW spr round 3 (radius: 5)
[13:43:32 -4024.988178] SLOW spr round 4 (radius: 10)
[13:44:54 -4024.988178] SLOW spr round 5 (radius: 15)
[13:46:23 -4009.915064] SLOW spr round 6 (radius: 5)
[13:47:47 -4007.718526] SLOW spr round 7 (radius: 5)
[13:49:05 -4007.718514] SLOW spr round 8 (radius: 10)
[13:50:26 -4007.678954] SLOW spr round 9 (radius: 15)
[13:51:52 -4007.678954] SLOW spr round 10 (radius: 20)
[13:53:33 -4007.678953] SLOW spr round 11 (radius: 25)
[13:55:18 -4006.074052] SLOW spr round 12 (radius: 5)
[13:56:43 -4002.298441] SLOW spr round 13 (radius: 5)
[13:58:00 -4002.298405] SLOW spr round 14 (radius: 10)
[13:59:21 -4002.298405] SLOW spr round 15 (radius: 15)
[14:00:46 -4002.298405] SLOW spr round 16 (radius: 20)
[14:02:24 -4002.298405] SLOW spr round 17 (radius: 25)
[14:04:05 -4002.298405] Model parameter optimization (eps = 0.100000)

[14:04:14] ML tree search #14, logLikelihood: -4002.169925

[14:04:14 -44901.397196] Initial branch length optimization
[14:04:16 -36085.558806] Model parameter optimization (eps = 10.000000)
[14:04:33 -35868.508884] AUTODETECT spr round 1 (radius: 5)
[14:05:56 -16363.572025] AUTODETECT spr round 2 (radius: 10)
[14:07:18 -9959.778856] AUTODETECT spr round 3 (radius: 15)
[14:08:46 -7445.344700] AUTODETECT spr round 4 (radius: 20)
[14:10:24 -5973.926771] AUTODETECT spr round 5 (radius: 25)
[14:12:06 -5152.927410] SPR radius for FAST iterations: 25 (autodetect)
[14:12:06 -5152.927410] Model parameter optimization (eps = 3.000000)
[14:12:22 -5146.226253] FAST spr round 1 (radius: 25)
[14:13:50 -4339.335462] FAST spr round 2 (radius: 25)
[14:15:14 -4279.958199] FAST spr round 3 (radius: 25)
[14:16:39 -4236.044584] FAST spr round 4 (radius: 25)
[14:18:03 -4192.968848] FAST spr round 5 (radius: 25)
[14:19:24 -4192.685975] FAST spr round 6 (radius: 25)
[14:20:45 -4192.685750] Model parameter optimization (eps = 1.000000)
[14:21:03 -4188.035760] SLOW spr round 1 (radius: 5)
[14:22:23 -4186.846908] SLOW spr round 2 (radius: 5)
[14:23:43 -4186.357840] SLOW spr round 3 (radius: 5)
[14:25:03 -4186.357192] SLOW spr round 4 (radius: 10)
[14:26:29 -4135.200142] SLOW spr round 5 (radius: 5)
[14:27:50 -4129.656634] SLOW spr round 6 (radius: 5)
[14:29:10 -4129.653908] SLOW spr round 7 (radius: 10)
[14:30:34 -4129.651654] SLOW spr round 8 (radius: 15)
[14:32:04 -4081.534133] SLOW spr round 9 (radius: 5)
[14:33:30 -4072.252611] SLOW spr round 10 (radius: 5)
[14:34:47 -4072.251098] SLOW spr round 11 (radius: 10)
[14:36:09 -4072.250869] SLOW spr round 12 (radius: 15)
[14:37:38 -4040.069474] SLOW spr round 13 (radius: 5)
[14:39:00 -4040.069305] SLOW spr round 14 (radius: 10)
[14:40:24 -4020.895871] SLOW spr round 15 (radius: 5)
[14:41:44 -4014.635417] SLOW spr round 16 (radius: 5)
[14:43:03 -4010.745033] SLOW spr round 17 (radius: 5)
[14:44:19 -4010.744920] SLOW spr round 18 (radius: 10)
[14:45:42 -4010.744917] SLOW spr round 19 (radius: 15)
[14:47:11 -4010.742385] SLOW spr round 20 (radius: 20)
[14:48:53 -4009.338966] SLOW spr round 21 (radius: 5)
[14:50:17 -4009.125286] SLOW spr round 22 (radius: 5)
[14:51:35 -4009.125233] SLOW spr round 23 (radius: 10)
[14:52:58 -4009.115479] SLOW spr round 24 (radius: 15)
[14:54:26 -4008.166002] SLOW spr round 25 (radius: 5)
[14:55:47 -4008.165232] SLOW spr round 26 (radius: 10)
[14:57:10 -4008.165188] SLOW spr round 27 (radius: 15)
[14:58:36 -4008.165185] SLOW spr round 28 (radius: 20)
[15:00:14 -4008.165184] SLOW spr round 29 (radius: 25)
[15:01:59 -4007.907986] SLOW spr round 30 (radius: 5)
[15:03:23 -4007.907931] SLOW spr round 31 (radius: 10)
[15:04:45 -4007.907930] SLOW spr round 32 (radius: 15)
[15:06:10 -4007.907929] SLOW spr round 33 (radius: 20)
[15:07:46 -4007.907928] SLOW spr round 34 (radius: 25)
[15:09:31 -4007.907927] Model parameter optimization (eps = 0.100000)

[15:09:40] ML tree search #15, logLikelihood: -4007.614650

[15:09:40 -45441.992326] Initial branch length optimization
[15:09:42 -36294.296977] Model parameter optimization (eps = 10.000000)
[15:09:57 -36115.251186] AUTODETECT spr round 1 (radius: 5)
[15:11:21 -16989.590010] AUTODETECT spr round 2 (radius: 10)
[15:12:41 -11360.803581] AUTODETECT spr round 3 (radius: 15)
[15:14:10 -8486.591393] AUTODETECT spr round 4 (radius: 20)
[15:15:46 -6911.316531] AUTODETECT spr round 5 (radius: 25)
[15:17:29 -5709.055367] SPR radius for FAST iterations: 25 (autodetect)
[15:17:29 -5709.055367] Model parameter optimization (eps = 3.000000)
[15:17:41 -5700.322460] FAST spr round 1 (radius: 25)
[15:19:12 -4114.600961] FAST spr round 2 (radius: 25)
[15:20:36 -3952.547850] FAST spr round 3 (radius: 25)
[15:21:56 -3951.157535] FAST spr round 4 (radius: 25)
[15:23:13 -3950.834982] FAST spr round 5 (radius: 25)
[15:24:31 -3950.834562] Model parameter optimization (eps = 1.000000)
[15:24:46 -3945.467667] SLOW spr round 1 (radius: 5)
[15:26:03 -3945.215033] SLOW spr round 2 (radius: 5)
[15:27:21 -3944.133499] SLOW spr round 3 (radius: 5)
[15:28:37 -3944.131339] SLOW spr round 4 (radius: 10)
[15:29:59 -3941.041967] SLOW spr round 5 (radius: 5)
[15:31:16 -3939.046724] SLOW spr round 6 (radius: 5)
[15:32:32 -3936.381030] SLOW spr round 7 (radius: 5)
[15:33:47 -3936.380998] SLOW spr round 8 (radius: 10)
[15:35:07 -3936.380998] SLOW spr round 9 (radius: 15)
[15:36:36 -3935.028895] SLOW spr round 10 (radius: 5)
[15:37:57 -3935.028018] SLOW spr round 11 (radius: 10)
[15:39:18 -3935.027971] SLOW spr round 12 (radius: 15)
[15:40:44 -3933.644098] SLOW spr round 13 (radius: 5)
[15:42:04 -3933.644029] SLOW spr round 14 (radius: 10)
[15:43:24 -3933.644029] SLOW spr round 15 (radius: 15)
[15:44:50 -3933.644029] SLOW spr round 16 (radius: 20)
[15:46:30 -3927.155129] SLOW spr round 17 (radius: 5)
[15:47:52 -3920.025148] SLOW spr round 18 (radius: 5)
[15:49:06 -3920.024950] SLOW spr round 19 (radius: 10)
[15:50:25 -3920.024921] SLOW spr round 20 (radius: 15)
[15:51:50 -3920.024917] SLOW spr round 21 (radius: 20)
[15:53:28 -3919.859771] SLOW spr round 22 (radius: 5)
[15:54:47 -3919.859771] SLOW spr round 23 (radius: 10)
[15:56:06 -3919.859771] SLOW spr round 24 (radius: 15)
[15:57:30 -3919.859770] SLOW spr round 25 (radius: 20)
[15:59:07 -3919.859770] SLOW spr round 26 (radius: 25)
[16:00:55 -3919.859770] Model parameter optimization (eps = 0.100000)

[16:01:03] ML tree search #16, logLikelihood: -3919.734822

[16:01:03 -45837.572418] Initial branch length optimization
[16:01:05 -36638.891344] Model parameter optimization (eps = 10.000000)
[16:01:21 -36457.735022] AUTODETECT spr round 1 (radius: 5)
[16:02:48 -16844.662455] AUTODETECT spr round 2 (radius: 10)
[16:04:09 -10727.928158] AUTODETECT spr round 3 (radius: 15)
[16:05:38 -8228.826296] AUTODETECT spr round 4 (radius: 20)
[16:07:09 -6437.537134] AUTODETECT spr round 5 (radius: 25)
[16:08:55 -5557.204055] SPR radius for FAST iterations: 25 (autodetect)
[16:08:55 -5557.204055] Model parameter optimization (eps = 3.000000)
[16:09:05 -5554.208396] FAST spr round 1 (radius: 25)
[16:10:32 -4159.689413] FAST spr round 2 (radius: 25)
[16:11:55 -4039.617500] FAST spr round 3 (radius: 25)
[16:13:18 -3988.375647] FAST spr round 4 (radius: 25)
[16:14:39 -3985.166057] FAST spr round 5 (radius: 25)
[16:15:57 -3985.165368] Model parameter optimization (eps = 1.000000)
[16:16:12 -3983.897769] SLOW spr round 1 (radius: 5)
[16:17:31 -3982.819741] SLOW spr round 2 (radius: 5)
[16:18:50 -3971.141406] SLOW spr round 3 (radius: 5)
[16:20:08 -3967.475129] SLOW spr round 4 (radius: 5)
[16:21:26 -3961.755437] SLOW spr round 5 (radius: 5)
[16:22:44 -3960.888228] SLOW spr round 6 (radius: 5)
[16:24:00 -3960.887890] SLOW spr round 7 (radius: 10)
[16:25:21 -3955.166796] SLOW spr round 8 (radius: 5)
[16:26:40 -3954.247048] SLOW spr round 9 (radius: 5)
[16:27:55 -3954.247046] SLOW spr round 10 (radius: 10)
[16:29:16 -3954.247046] SLOW spr round 11 (radius: 15)
[16:30:41 -3952.228604] SLOW spr round 12 (radius: 5)
[16:32:03 -3952.228583] SLOW spr round 13 (radius: 10)
[16:33:24 -3952.228583] SLOW spr round 14 (radius: 15)
[16:34:49 -3952.228583] SLOW spr round 15 (radius: 20)
[16:36:26 -3951.783276] SLOW spr round 16 (radius: 5)
[16:37:50 -3951.628441] SLOW spr round 17 (radius: 5)
[16:39:06 -3951.628440] SLOW spr round 18 (radius: 10)
[16:40:27 -3951.628439] SLOW spr round 19 (radius: 15)
[16:41:51 -3951.628439] SLOW spr round 20 (radius: 20)
[16:43:24 -3951.628439] SLOW spr round 21 (radius: 25)
[16:45:01 -3951.628439] Model parameter optimization (eps = 0.100000)

[16:45:13] ML tree search #17, logLikelihood: -3951.438142

[16:45:13 -44966.417733] Initial branch length optimization
[16:45:15 -36037.565450] Model parameter optimization (eps = 10.000000)
[16:45:30 -35833.464323] AUTODETECT spr round 1 (radius: 5)
[16:46:52 -16250.123485] AUTODETECT spr round 2 (radius: 10)
[16:48:13 -9618.678615] AUTODETECT spr round 3 (radius: 15)
[16:49:42 -6117.768813] AUTODETECT spr round 4 (radius: 20)
[16:51:15 -5153.745873] AUTODETECT spr round 5 (radius: 25)
[16:52:54 -4814.117329] SPR radius for FAST iterations: 25 (autodetect)
[16:52:54 -4814.117329] Model parameter optimization (eps = 3.000000)
[16:53:12 -4799.017484] FAST spr round 1 (radius: 25)
[16:54:40 -4132.009677] FAST spr round 2 (radius: 25)
[16:56:03 -4000.523897] FAST spr round 3 (radius: 25)
[16:57:25 -4000.207429] FAST spr round 4 (radius: 25)
[16:58:44 -4000.207429] Model parameter optimization (eps = 1.000000)
[16:59:01 -3999.032214] SLOW spr round 1 (radius: 5)
[17:00:21 -3998.634319] SLOW spr round 2 (radius: 5)
[17:01:39 -3998.184661] SLOW spr round 3 (radius: 5)
[17:02:56 -3998.184632] SLOW spr round 4 (radius: 10)
[17:04:19 -3998.173545] SLOW spr round 5 (radius: 15)
[17:05:46 -3998.173535] SLOW spr round 6 (radius: 20)
[17:07:27 -3990.774062] SLOW spr round 7 (radius: 5)
[17:08:54 -3978.718888] SLOW spr round 8 (radius: 5)
[17:10:13 -3977.290143] SLOW spr round 9 (radius: 5)
[17:11:29 -3977.290127] SLOW spr round 10 (radius: 10)
[17:12:50 -3977.290127] SLOW spr round 11 (radius: 15)
[17:14:17 -3975.992878] SLOW spr round 12 (radius: 5)
[17:15:38 -3975.992874] SLOW spr round 13 (radius: 10)
[17:16:59 -3975.992874] SLOW spr round 14 (radius: 15)
[17:18:25 -3975.992874] SLOW spr round 15 (radius: 20)
[17:20:07 -3973.279443] SLOW spr round 16 (radius: 5)
[17:21:29 -3973.279443] SLOW spr round 17 (radius: 10)
[17:22:52 -3973.279443] SLOW spr round 18 (radius: 15)
[17:24:17 -3973.279443] SLOW spr round 19 (radius: 20)
[17:25:59 -3973.279443] SLOW spr round 20 (radius: 25)
[17:27:55 -3963.343733] SLOW spr round 21 (radius: 5)
[17:29:19 -3961.882117] SLOW spr round 22 (radius: 5)
[17:30:35 -3961.882047] SLOW spr round 23 (radius: 10)
[17:31:56 -3961.882046] SLOW spr round 24 (radius: 15)
[17:33:23 -3953.991471] SLOW spr round 25 (radius: 5)
[17:34:43 -3953.991431] SLOW spr round 26 (radius: 10)
[17:36:05 -3952.974112] SLOW spr round 27 (radius: 5)
[17:37:23 -3952.871042] SLOW spr round 28 (radius: 5)
[17:38:37 -3952.870847] SLOW spr round 29 (radius: 10)
[17:39:58 -3952.870835] SLOW spr round 30 (radius: 15)
[17:41:23 -3952.870835] SLOW spr round 31 (radius: 20)
[17:43:02 -3952.870835] SLOW spr round 32 (radius: 25)
[17:44:50 -3952.870835] Model parameter optimization (eps = 0.100000)

[17:44:57] ML tree search #18, logLikelihood: -3952.792655

[17:44:57 -45649.431273] Initial branch length optimization
[17:44:59 -36567.504788] Model parameter optimization (eps = 10.000000)
[17:45:15 -36385.668404] AUTODETECT spr round 1 (radius: 5)
[17:46:40 -17453.231007] AUTODETECT spr round 2 (radius: 10)
[17:48:00 -10928.242241] AUTODETECT spr round 3 (radius: 15)
[17:49:29 -8183.891147] AUTODETECT spr round 4 (radius: 20)
[17:51:04 -6296.935793] AUTODETECT spr round 5 (radius: 25)
[17:52:45 -5598.047467] SPR radius for FAST iterations: 25 (autodetect)
[17:52:45 -5598.047467] Model parameter optimization (eps = 3.000000)
[17:52:57 -5595.504058] FAST spr round 1 (radius: 25)
[17:54:27 -4136.908509] FAST spr round 2 (radius: 25)
[17:55:49 -3998.328800] FAST spr round 3 (radius: 25)
[17:57:10 -3990.351966] FAST spr round 4 (radius: 25)
[17:58:30 -3990.351638] Model parameter optimization (eps = 1.000000)
[17:58:38 -3989.731545] SLOW spr round 1 (radius: 5)
[17:59:56 -3986.280296] SLOW spr round 2 (radius: 5)
[18:01:12 -3986.279836] SLOW spr round 3 (radius: 10)
[18:02:36 -3975.978180] SLOW spr round 4 (radius: 5)
[18:03:54 -3965.693699] SLOW spr round 5 (radius: 5)
[18:05:09 -3965.693697] SLOW spr round 6 (radius: 10)
[18:06:31 -3965.693695] SLOW spr round 7 (radius: 15)
[18:07:59 -3956.833394] SLOW spr round 8 (radius: 5)
[18:09:22 -3954.136505] SLOW spr round 9 (radius: 5)
[18:10:36 -3954.136238] SLOW spr round 10 (radius: 10)
[18:11:59 -3952.009848] SLOW spr round 11 (radius: 5)
[18:13:17 -3951.294284] SLOW spr round 12 (radius: 5)
[18:14:32 -3951.293625] SLOW spr round 13 (radius: 10)
[18:15:56 -3937.378284] SLOW spr round 14 (radius: 5)
[18:17:15 -3930.983756] SLOW spr round 15 (radius: 5)
[18:18:32 -3930.983585] SLOW spr round 16 (radius: 10)
[18:19:54 -3930.244032] SLOW spr round 17 (radius: 5)
[18:21:10 -3930.243990] SLOW spr round 18 (radius: 10)
[18:22:31 -3930.243988] SLOW spr round 19 (radius: 15)
[18:23:57 -3929.902504] SLOW spr round 20 (radius: 5)
[18:25:17 -3929.902501] SLOW spr round 21 (radius: 10)
[18:26:38 -3929.902500] SLOW spr round 22 (radius: 15)
[18:28:04 -3929.902498] SLOW spr round 23 (radius: 20)
[18:29:47 -3929.866995] SLOW spr round 24 (radius: 25)
[18:31:44 -3926.397826] SLOW spr round 25 (radius: 5)
[18:33:06 -3926.397750] SLOW spr round 26 (radius: 10)
[18:34:27 -3926.397740] SLOW spr round 27 (radius: 15)
[18:35:53 -3926.397738] SLOW spr round 28 (radius: 20)
[18:37:35 -3926.397737] SLOW spr round 29 (radius: 25)
[18:39:31 -3926.397737] Model parameter optimization (eps = 0.100000)

[18:39:42] ML tree search #19, logLikelihood: -3926.079440

[18:39:42 -45762.756564] Initial branch length optimization
[18:39:44 -36713.747662] Model parameter optimization (eps = 10.000000)
[18:40:06 -36538.153751] AUTODETECT spr round 1 (radius: 5)
[18:41:30 -16296.377303] AUTODETECT spr round 2 (radius: 10)
[18:42:49 -10542.620697] AUTODETECT spr round 3 (radius: 15)
[18:44:16 -7502.522314] AUTODETECT spr round 4 (radius: 20)
[18:45:47 -5829.030188] AUTODETECT spr round 5 (radius: 25)
[18:47:22 -5392.195880] SPR radius for FAST iterations: 25 (autodetect)
[18:47:22 -5392.195880] Model parameter optimization (eps = 3.000000)
[18:47:33 -5388.949606] FAST spr round 1 (radius: 25)
[18:49:03 -4330.038210] FAST spr round 2 (radius: 25)
[18:50:27 -4251.092414] FAST spr round 3 (radius: 25)
[18:51:48 -4218.697416] FAST spr round 4 (radius: 25)
[18:53:05 -4218.694319] Model parameter optimization (eps = 1.000000)
[18:53:24 -4213.246654] SLOW spr round 1 (radius: 5)
[18:54:42 -4212.856272] SLOW spr round 2 (radius: 5)
[18:55:59 -4211.805619] SLOW spr round 3 (radius: 5)
[18:57:14 -4211.647643] SLOW spr round 4 (radius: 5)
[18:58:30 -4211.647633] SLOW spr round 5 (radius: 10)
[18:59:52 -4210.312407] SLOW spr round 6 (radius: 5)
[19:01:12 -4209.136957] SLOW spr round 7 (radius: 5)
[19:02:28 -4209.136915] SLOW spr round 8 (radius: 10)
[19:03:49 -4208.696148] SLOW spr round 9 (radius: 5)
[19:05:06 -4208.696142] SLOW spr round 10 (radius: 10)
[19:06:27 -4208.696129] SLOW spr round 11 (radius: 15)
[19:07:51 -4206.320125] SLOW spr round 12 (radius: 5)
[19:09:12 -4206.320108] SLOW spr round 13 (radius: 10)
[19:10:33 -4206.320108] SLOW spr round 14 (radius: 15)
[19:11:58 -4206.320108] SLOW spr round 15 (radius: 20)
[19:13:34 -4169.260398] SLOW spr round 16 (radius: 5)
[19:14:57 -4167.686942] SLOW spr round 17 (radius: 5)
[19:16:14 -4167.686939] SLOW spr round 18 (radius: 10)
[19:17:35 -4167.686939] SLOW spr round 19 (radius: 15)
[19:19:01 -4165.059539] SLOW spr round 20 (radius: 5)
[19:20:22 -4165.059532] SLOW spr round 21 (radius: 10)
[19:21:44 -4165.059532] SLOW spr round 22 (radius: 15)
[19:23:09 -4165.059532] SLOW spr round 23 (radius: 20)
[19:24:45 -4150.162912] SLOW spr round 24 (radius: 5)
[19:26:09 -4144.119538] SLOW spr round 25 (radius: 5)
[19:27:25 -4144.119530] SLOW spr round 26 (radius: 10)
[19:28:45 -4144.119530] SLOW spr round 27 (radius: 15)
[19:30:09 -4144.119530] SLOW spr round 28 (radius: 20)
[19:31:43 -4142.703307] SLOW spr round 29 (radius: 5)
[19:33:05 -4142.702635] SLOW spr round 30 (radius: 10)
[19:34:26 -4142.702608] SLOW spr round 31 (radius: 15)
[19:35:50 -4142.702607] SLOW spr round 32 (radius: 20)
[19:37:24 -4142.702606] SLOW spr round 33 (radius: 25)
[19:39:03 -4142.584463] SLOW spr round 34 (radius: 5)
[19:40:26 -4142.582914] SLOW spr round 35 (radius: 10)
[19:41:47 -4142.582873] SLOW spr round 36 (radius: 15)
[19:43:14 -4142.050328] SLOW spr round 37 (radius: 5)
[19:44:35 -4142.046527] SLOW spr round 38 (radius: 10)
[19:45:56 -4142.046527] SLOW spr round 39 (radius: 15)
[19:47:20 -4142.046523] SLOW spr round 40 (radius: 20)
[19:48:52 -4141.396774] SLOW spr round 41 (radius: 5)
[19:50:13 -4141.074538] SLOW spr round 42 (radius: 5)
[19:51:29 -4141.074535] SLOW spr round 43 (radius: 10)
[19:52:49 -4141.074535] SLOW spr round 44 (radius: 15)
[19:54:12 -4141.074535] SLOW spr round 45 (radius: 20)
[19:55:44 -4141.074535] SLOW spr round 46 (radius: 25)
[19:57:21 -4141.074535] Model parameter optimization (eps = 0.100000)

[19:57:27] ML tree search #20, logLikelihood: -4140.983920


Optimized model parameters:

   Partition 0: noname
   Rate heterogeneity: FREE (4 cats, mean),  weights&rates: (0.360366,0.462037) (0.414703,0.746095) (0.155686,1.816863) (0.069245,3.483714) 
   Base frequencies (model): 
M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 
M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 
M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 
M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 
   Substitution rates (model): 
M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 
M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 
M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 
M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 


Final LogLikelihood: -3909.906674

AIC score: 11829.813348 / AICc score: 8055889.813348 / BIC score: 15995.275923
Free parameters (model + branch lengths): 2005

WARNING: Number of free parameters (K=2005) is larger than alignment size (n=59).
         This might lead to overfitting and compromise tree inference results!


Best ML tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/3_mltree/P58304.raxml.bestTree
All ML trees saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/3_mltree/P58304.raxml.mlTrees
Optimized model saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/3_mltree/P58304.raxml.bestModel

Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_300621/phylogeny-snakemake/results/P58304/3_mltree/P58304.raxml.log

Analysis started: 17-Jul-2021 11:37:36 / finished: 18-Jul-2021 07:35:03

Elapsed time: 71847.484 seconds