RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 13:40:20 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/2_msa/P49770_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/3_mltree/P49770.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/4_raxmlng_ancestral/P49770 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622803220 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/2_msa/P49770_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 351 sites WARNING: Sequences tr_B4R0W6_B4R0W6_DROSI_7240 and tr_Q9VAD4_Q9VAD4_DROME_7227 are exactly identical! WARNING: Sequences tr_B4R0W6_B4R0W6_DROSI_7240 and tr_B4HZI5_B4HZI5_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4R3J7_B4R3J7_DROSI_7240 and tr_B4I9Y7_B4I9Y7_DROSE_7238 are exactly identical! WARNING: Sequences tr_F1NAP1_F1NAP1_CHICK_9031 and tr_A0A226NZN5_A0A226NZN5_COLVI_9014 are exactly identical! WARNING: Sequences tr_B6H748_B6H748_PENRW_500485 and tr_A0A1V6XQL9_A0A1V6XQL9_PENNA_60175 are exactly identical! WARNING: Sequences tr_A0A2I3HZ59_A0A2I3HZ59_NOMLE_61853 and sp_Q5RAR0_EI2BA_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I3HZ59_A0A2I3HZ59_NOMLE_61853 and sp_Q14232_EI2BA_HUMAN_9606 are exactly identical! WARNING: Sequences tr_J3K9P1_J3K9P1_COCIM_246410 and tr_E9CRS1_E9CRS1_COCPS_443226 are exactly identical! WARNING: Sequences tr_J3K9P1_J3K9P1_COCIM_246410 and tr_A0A0J6YB68_A0A0J6YB68_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6Q6Z0_B6Q6Z0_TALMQ_441960 and tr_A0A093VFJ0_A0A093VFJ0_TALMA_1077442 are exactly identical! WARNING: Sequences tr_B2W118_B2W118_PYRTR_426418 and tr_A0A2W1HW86_A0A2W1HW86_9PLEO_45151 are exactly identical! WARNING: Sequences tr_D8S7R3_D8S7R3_SELML_88036 and tr_D8T430_D8T430_SELML_88036 are exactly identical! WARNING: Sequences tr_B8PCT5_B8PCT5_POSPM_561896 and tr_A0A1X6NAP8_A0A1X6NAP8_9APHY_670580 are exactly identical! WARNING: Sequences tr_Q29HR5_Q29HR5_DROPS_46245 and tr_B4GYF8_B4GYF8_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A179UIK0_A0A179UIK0_BLAGS_559298 and tr_C5GAI3_C5GAI3_AJEDR_559297 are exactly identical! WARNING: Sequences tr_H2Q762_H2Q762_PANTR_9598 and tr_A0A2R8ZMU2_A0A2R8ZMU2_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2Q8M3_H2Q8M3_PANTR_9598 and tr_A0A2R9AGX7_A0A2R9AGX7_PANPA_9597 are exactly identical! WARNING: Sequences tr_F9FJU1_F9FJU1_FUSOF_660025 and tr_A0A0D2XMC7_A0A0D2XMC7_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9FJU1_F9FJU1_FUSOF_660025 and tr_N4TVK2_N4TVK2_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9FJU1_F9FJU1_FUSOF_660025 and tr_X0BN42_X0BN42_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9FJU1_F9FJU1_FUSOF_660025 and tr_A0A2H3GWV3_A0A2H3GWV3_FUSOX_327505 are exactly identical! WARNING: Sequences tr_E9ER95_E9ER95_METRA_655844 and tr_A0A0D9NRH3_A0A0D9NRH3_METAN_1291518 are exactly identical! WARNING: Sequences tr_Q2UBN6_Q2UBN6_ASPOR_510516 and tr_A0A1S9DR75_A0A1S9DR75_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_A0A0E0IRQ3_A0A0E0IRQ3_ORYNI_4536 and tr_A2Z6W2_A2Z6W2_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0IRQ3_A0A0E0IRQ3_ORYNI_4536 and tr_I1QU52_I1QU52_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0IRQ3_A0A0E0IRQ3_ORYNI_4536 and tr_A0A0E0QYM0_A0A0E0QYM0_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0IRQ3_A0A0E0IRQ3_ORYNI_4536 and tr_A0A0D3HD92_A0A0D3HD92_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0IRQ3_A0A0E0IRQ3_ORYNI_4536 and tr_A0A0E0BA13_A0A0E0BA13_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A2QQ20_A2QQ20_ASPNC_425011 and tr_G7XKM3_G7XKM3_ASPKW_1033177 are exactly identical! WARNING: Sequences tr_A2QQ20_A2QQ20_ASPNC_425011 and tr_G3YFP2_G3YFP2_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2QQ20_A2QQ20_ASPNC_425011 and tr_A0A146FVK5_A0A146FVK5_9EURO_1069201 are exactly identical! WARNING: Sequences tr_A2QQ20_A2QQ20_ASPNC_425011 and tr_A0A317V173_A0A317V173_9EURO_1448314 are exactly identical! WARNING: Sequences tr_A2QQ20_A2QQ20_ASPNC_425011 and tr_A0A319ALY9_A0A319ALY9_9EURO_1450533 are exactly identical! WARNING: Sequences tr_F7HB02_F7HB02_MACMU_9544 and tr_G8F4U2_G8F4U2_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7HB02_F7HB02_MACMU_9544 and tr_A0A2K6CA02_A0A2K6CA02_MACNE_9545 are exactly identical! WARNING: Sequences tr_H9ETU6_H9ETU6_MACMU_9544 and tr_A0A0D9S538_A0A0D9S538_CHLSB_60711 are exactly identical! WARNING: Sequences tr_E5S591_E5S591_TRISP_6334 and tr_A0A0V0RRW9_A0A0V0RRW9_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5S591_E5S591_TRISP_6334 and tr_A0A0V0VNL1_A0A0V0VNL1_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5S591_E5S591_TRISP_6334 and tr_A0A0V1NTP5_A0A0V1NTP5_9BILA_92180 are exactly identical! WARNING: Sequences tr_E5S591_E5S591_TRISP_6334 and tr_A0A0V0TRA9_A0A0V0TRA9_9BILA_144512 are exactly identical! WARNING: Sequences tr_G2Y2I8_G2Y2I8_BOTF4_999810 and tr_M7TTV3_M7TTV3_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_F2SL99_F2SL99_TRIRC_559305 and tr_A0A178ENW5_A0A178ENW5_TRIRU_5551 are exactly identical! WARNING: Sequences tr_A0A287F4B8_A0A287F4B8_HORVV_112509 and tr_A0A3B5YUP4_A0A3B5YUP4_WHEAT_4565 are exactly identical! WARNING: Sequences tr_T1LVQ3_T1LVQ3_TRIUA_4572 and tr_A0A3B5XXR0_A0A3B5XXR0_WHEAT_4565 are exactly identical! WARNING: Sequences tr_M2VCA6_M2VCA6_COCH5_701091 and tr_W6Y2K3_W6Y2K3_COCCA_930089 are exactly identical! WARNING: Sequences tr_M2VCA6_M2VCA6_COCH5_701091 and tr_W6Z1X6_W6Z1X6_COCMI_930090 are exactly identical! WARNING: Sequences tr_U5H8W4_U5H8W4_USTV1_683840 and tr_A0A2X0P5W2_A0A2X0P5W2_9BASI_796604 are exactly identical! WARNING: Sequences tr_V2Y8Q5_V2Y8Q5_MONRO_1381753 and tr_A0A0W0EUG5_A0A0W0EUG5_9AGAR_221103 are exactly identical! WARNING: Sequences tr_W2QHS4_W2QHS4_PHYPN_761204 and tr_A0A0W8CET4_A0A0W8CET4_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2QHS4_W2QHS4_PHYPN_761204 and tr_W2JJ67_W2JJ67_PHYPR_4792 are exactly identical! WARNING: Sequences tr_W2QX05_W2QX05_PHYPN_761204 and tr_W2M936_W2M936_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A2I3M557_A0A2I3M557_PAPAN_9555 and tr_A0A2K5M0Q1_A0A2K5M0Q1_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3M557_A0A2I3M557_PAPAN_9555 and tr_A0A2K5XLQ2_A0A2K5XLQ2_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A094GDH7_A0A094GDH7_9PEZI_1420912 and tr_A0A1B8GGE4_A0A1B8GGE4_9PEZI_342668 are exactly identical! WARNING: Sequences tr_A0A094GDH7_A0A094GDH7_9PEZI_1420912 and tr_A0A1B8CIA7_A0A1B8CIA7_9PEZI_1622147 are exactly identical! WARNING: Sequences tr_A0A094GDH7_A0A094GDH7_9PEZI_1420912 and tr_A0A1B8EWV1_A0A1B8EWV1_9PEZI_1622149 are exactly identical! WARNING: Sequences tr_A0A0D9RID9_A0A0D9RID9_CHLSB_60711 and tr_A0A2K5P5K8_A0A2K5P5K8_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A0A2ICK6_A0A0A2ICK6_PENEN_27334 and tr_W6QKK0_W6QKK0_PENRF_1365484 are exactly identical! WARNING: Sequences tr_A0A067CTR4_A0A067CTR4_SAPPC_695850 and tr_T0QNH9_T0QNH9_9STRA_1156394 are exactly identical! WARNING: Sequences tr_A0A0D2SAH4_A0A0D2SAH4_GOSRA_29730 and tr_A0A1U8JDB1_A0A1U8JDB1_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0F8WL07_A0A0F8WL07_9EURO_308745 and tr_A0A2T5M1N4_A0A2T5M1N4_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A0G4P0K3_A0A0G4P0K3_PENCA_1429867 and tr_A0A101MT08_A0A101MT08_9EURO_48697 are exactly identical! WARNING: Sequences tr_A0A0G4P0K3_A0A0G4P0K3_PENCA_1429867 and tr_A0A1V6NEY9_A0A1V6NEY9_9EURO_60169 are exactly identical! WARNING: Sequences tr_A0A0G4P0K3_A0A0G4P0K3_PENCA_1429867 and tr_A0A1V6R460_A0A1V6R460_9EURO_60172 are exactly identical! WARNING: Sequences tr_A0A0V0XAR1_A0A0V0XAR1_9BILA_92179 and tr_A0A0V1LGT4_A0A0V1LGT4_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A117DZR0_A0A117DZR0_ASPNG_5061 and tr_A0A1L9NMX1_A0A1L9NMX1_ASPTU_767770 are exactly identical! WARNING: Sequences tr_A0A1S3WXW8_A0A1S3WXW8_TOBAC_4097 and tr_A0A1U7Y9E6_A0A1U7Y9E6_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1R3S330_A0A1R3S330_ASPC5_602072 and tr_A0A317W9I2_A0A317W9I2_9EURO_1450535 are exactly identical! WARNING: Sequences tr_A0A1U8ET70_A0A1U8ET70_CAPAN_4072 and tr_A0A2G3B1V2_A0A2G3B1V2_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2S7QLW3_A0A2S7QLW3_9HELO_2070414 and tr_A0A2S7PG62_A0A2S7PG62_9HELO_2070412 are exactly identical! WARNING: Sequences tr_A0A2Y9FA58_A0A2Y9FA58_PHYCD_9755 and tr_A0A384AB64_A0A384AB64_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2V5HVW8_A0A2V5HVW8_9EURO_1450541 and tr_A0A2V5HAC9_A0A2V5HAC9_9EURO_1450538 are exactly identical! WARNING: Duplicate sequences found: 72 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/4_raxmlng_ancestral/P49770.raxml.reduced.phy Alignment comprises 1 partitions and 351 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 351 Gaps: 9.20 % Invariant sites: 0.28 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/4_raxmlng_ancestral/P49770.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/3_mltree/P49770.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 88 / 7040 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -161222.023199 [00:00:00 -161222.023199] Initial branch length optimization [00:00:01 -158400.535244] Model parameter optimization (eps = 0.100000) [00:00:32] Tree #1, final logLikelihood: -157909.576815 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.163435,0.358850) (0.220042,0.389773) (0.317962,0.827391) (0.298561,1.984538) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/4_raxmlng_ancestral/P49770.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/4_raxmlng_ancestral/P49770.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/4_raxmlng_ancestral/P49770.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P49770/4_raxmlng_ancestral/P49770.raxml.log Analysis started: 04-Jun-2021 13:40:20 / finished: 04-Jun-2021 13:40:56 Elapsed time: 35.853 seconds