RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) CPU E5-2690 v4 @ 2.60GHz, 28 cores, 251 GB RAM RAxML-NG was called at 12-Jul-2021 17:21:40 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/2_msa/P49585_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/3_mltree/P49585.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/4_raxmlng_ancestral/P49585 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626099700 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/2_msa/P49585_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 367 sites WARNING: Sequences tr_B4QMG0_B4QMG0_DROSI_7240 and tr_Q7K4C7_Q7K4C7_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QMG0_B4QMG0_DROSI_7240 and tr_B4HVU8_B4HVU8_DROSE_7238 are exactly identical! WARNING: Sequences tr_M3XLZ6_M3XLZ6_MUSPF_9669 and tr_K7GNX2_K7GNX2_PIG_9823 are exactly identical! WARNING: Sequences tr_M3XLZ6_M3XLZ6_MUSPF_9669 and tr_A0A2Y9JW36_A0A2Y9JW36_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3XXV7_M3XXV7_MUSPF_9669 and tr_A0A2Y9KCH5_A0A2Y9KCH5_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2I3H1F8_A0A2I3H1F8_NOMLE_61853 and tr_G3QIZ0_G3QIZ0_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A2I3H1F8_A0A2I3H1F8_NOMLE_61853 and tr_K7AI72_K7AI72_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I3H1F8_A0A2I3H1F8_NOMLE_61853 and sp_Q9Y5K3_PCY1B_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I3H1F8_A0A2I3H1F8_NOMLE_61853 and tr_A0A2R8ZXA1_A0A2R8ZXA1_PANPA_9597 are exactly identical! WARNING: Sequences tr_J3K9P6_J3K9P6_COCIM_246410 and tr_E9CRT5_E9CRT5_COCPS_443226 are exactly identical! WARNING: Sequences tr_J3K9P6_J3K9P6_COCIM_246410 and tr_A0A0J6YB81_A0A0J6YB81_COCIT_404692 are exactly identical! WARNING: Sequences tr_B6Q706_B6Q706_TALMQ_441960 and tr_A0A093VEH4_A0A093VEH4_TALMA_1077442 are exactly identical! WARNING: Sequences tr_G2WR71_G2WR71_VERDV_498257 and tr_A0A0G4LWW3_A0A0G4LWW3_9PEZI_100787 are exactly identical! WARNING: Sequences tr_Q2M046_Q2M046_DROPS_46245 and tr_B4GS47_B4GS47_DROPE_7234 are exactly identical! WARNING: Sequences tr_B8MWE0_B8MWE0_ASPFN_332952 and tr_Q2UPL6_Q2UPL6_ASPOR_510516 are exactly identical! WARNING: Sequences tr_A0A179UN66_A0A179UN66_BLAGS_559298 and tr_C5GAG8_C5GAG8_AJEDR_559297 are exactly identical! WARNING: Sequences tr_E2RBM2_E2RBM2_CANLF_9615 and tr_A0A2U3VC62_A0A2U3VC62_ODORO_9708 are exactly identical! WARNING: Sequences tr_E2RBM2_E2RBM2_CANLF_9615 and tr_A0A2U3YDC7_A0A2U3YDC7_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F6YJJ8_F6YJJ8_HORSE_9796 and tr_I3MNS1_I3MNS1_ICTTR_43179 are exactly identical! WARNING: Sequences tr_F9FLQ2_F9FLQ2_FUSOF_660025 and tr_W7M5R7_W7M5R7_GIBM7_334819 are exactly identical! WARNING: Sequences tr_F9FLQ2_F9FLQ2_FUSOF_660025 and tr_A0A0D2XN77_A0A0D2XN77_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9FLQ2_F9FLQ2_FUSOF_660025 and tr_S0E4N0_S0E4N0_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_F9FLQ2_F9FLQ2_FUSOF_660025 and tr_N4TY63_N4TY63_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9FLQ2_F9FLQ2_FUSOF_660025 and tr_X0CJP4_X0CJP4_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9FLQ2_F9FLQ2_FUSOF_660025 and tr_A0A2H3SW90_A0A2H3SW90_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9FLQ2_F9FLQ2_FUSOF_660025 and tr_A0A365MTQ1_A0A365MTQ1_GIBIN_948311 are exactly identical! WARNING: Sequences tr_A0A0E0G229_A0A0E0G229_ORYNI_4536 and tr_A0A0D3F1C8_A0A0D3F1C8_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0J9XRQ8_A0A0J9XRQ8_BRUMA_6279 and tr_A0A158PPU7_A0A158PPU7_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A1D5RCC8_A0A1D5RCC8_MACMU_9544 and tr_G7Q2E1_G7Q2E1_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5RCC8_A0A1D5RCC8_MACMU_9544 and tr_A0A096N6P2_A0A096N6P2_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A1D5RCC8_A0A1D5RCC8_MACMU_9544 and tr_A0A0D9RPE6_A0A0D9RPE6_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A1D5RCC8_A0A1D5RCC8_MACMU_9544 and tr_A0A2K5KUQ7_A0A2K5KUQ7_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5RCC8_A0A1D5RCC8_MACMU_9544 and tr_A0A2K6B9C6_A0A2K6B9C6_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5RCC8_A0A1D5RCC8_MACMU_9544 and tr_A0A2K5YB37_A0A2K5YB37_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7GU13_F7GU13_MACMU_9544 and tr_G7NZ41_G7NZ41_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7GU13_F7GU13_MACMU_9544 and tr_A0A2I3MY35_A0A2I3MY35_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7GU13_F7GU13_MACMU_9544 and tr_A0A2K5NXI8_A0A2K5NXI8_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7GU13_F7GU13_MACMU_9544 and tr_A0A2K6DH42_A0A2K6DH42_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7GU13_F7GU13_MACMU_9544 and tr_A0A2K5ZCW3_A0A2K5ZCW3_MANLE_9568 are exactly identical! WARNING: Sequences tr_G7XKN7_G7XKN7_ASPKW_1033177 and tr_A0A100IHI9_A0A100IHI9_ASPNG_5061 are exactly identical! WARNING: Sequences tr_G7XKN7_G7XKN7_ASPKW_1033177 and tr_A0A1L9NN31_A0A1L9NN31_ASPTU_767770 are exactly identical! WARNING: Sequences tr_G7XKN7_G7XKN7_ASPKW_1033177 and tr_A0A317V050_A0A317V050_9EURO_1448314 are exactly identical! WARNING: Sequences tr_A2ZAL2_A2ZAL2_ORYSI_39946 and tr_I1QWA9_I1QWA9_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A2ZAL2_A2ZAL2_ORYSI_39946 and tr_Q9XFE5_Q9XFE5_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_B8BAX9_B8BAX9_ORYSI_39946 and tr_I1QFW5_I1QFW5_ORYGL_4538 are exactly identical! WARNING: Sequences tr_B8BAX9_B8BAX9_ORYSI_39946 and tr_Q7EYE4_Q7EYE4_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_H1VQN5_H1VQN5_COLHI_759273 and tr_A0A166MV47_A0A166MV47_9PEZI_1573173 are exactly identical! WARNING: Sequences tr_G3SP78_G3SP78_LOXAF_9785 and tr_A0A2Y9DYF0_A0A2Y9DYF0_TRIMA_127582 are exactly identical! WARNING: Sequences tr_H0ZGR9_H0ZGR9_TAEGU_59729 and tr_A0A091ECL6_A0A091ECL6_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A0E0NAJ2_A0A0E0NAJ2_ORYRU_4529 and tr_A0A0D9YN04_A0A0D9YN04_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0R2Y2_A0A0E0R2Y2_ORYRU_4529 and tr_A0A0D3HH04_A0A0D3HH04_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_E3LCM5_E3LCM5_CAERE_31234 and tr_A0A261CSB7_A0A261CSB7_9PELO_1503980 are exactly identical! WARNING: Sequences tr_C4VBB3_C4VBB3_NOSCE_578460 and tr_A0A0F9WQC7_A0A0F9WQC7_9MICR_40302 are exactly identical! WARNING: Sequences tr_F2PXZ9_F2PXZ9_TRIEC_559882 and tr_A0A059J970_A0A059J970_9EURO_1215338 are exactly identical! WARNING: Sequences tr_M4EUI8_M4EUI8_BRARP_51351 and tr_A0A078J601_A0A078J601_BRANA_3708 are exactly identical! WARNING: Sequences tr_M7ZW06_M7ZW06_TRIUA_4572 and tr_A0A3B5XZI0_A0A3B5XZI0_WHEAT_4565 are exactly identical! WARNING: Sequences tr_W2PYX8_W2PYX8_PHYPN_761204 and tr_A0A0W8BW09_A0A0W8BW09_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2PYX8_W2PYX8_PHYPN_761204 and tr_W2KXV3_W2KXV3_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A3B6NNK2_A0A3B6NNK2_WHEAT_4565 and tr_A0A3B6PJL5_A0A3B6PJL5_WHEAT_4565 are exactly identical! WARNING: Sequences tr_A0A3B6NNK2_A0A3B6NNK2_WHEAT_4565 and tr_A0A3B6QD03_A0A3B6QD03_WHEAT_4565 are exactly identical! WARNING: Sequences tr_A0A015KJA8_A0A015KJA8_9GLOM_1432141 and tr_A0A2H5R6A7_A0A2H5R6A7_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A067FAG2_A0A067FAG2_CITSI_2711 and tr_V4S6C6_V4S6C6_9ROSI_85681 are exactly identical! WARNING: Sequences tr_Q42622_Q42622_BRANA_3708 and tr_A0A0D3DYW9_A0A0D3DYW9_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A067CQ07_A0A067CQ07_SAPPC_695850 and tr_T0RI77_T0RI77_9STRA_1156394 are exactly identical! WARNING: Sequences tr_A0A0F8V615_A0A0F8V615_9EURO_308745 and tr_A0A2T5M1L2_A0A2T5M1L2_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A091JNR0_A0A091JNR0_EGRGA_188379 and tr_A0A091HNZ5_A0A091HNZ5_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091UN73_A0A091UN73_NIPNI_128390 and tr_A0A0A0B306_A0A0A0B306_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A0G4P0Q5_A0A0G4P0Q5_PENCA_1429867 and tr_A0A117NRT3_A0A117NRT3_9EURO_48697 are exactly identical! WARNING: Sequences tr_A0A0G4P0Q5_A0A0G4P0Q5_PENCA_1429867 and tr_A0A1V6NEI0_A0A1V6NEI0_9EURO_60169 are exactly identical! WARNING: Sequences tr_V6RXE7_V6RXE7_GIBZE_229533 and tr_A0A2T4GHZ9_A0A2T4GHZ9_FUSCU_5516 are exactly identical! WARNING: Sequences tr_A0A194W9T2_A0A194W9T2_9PEZI_105487 and tr_A0A194UV10_A0A194UV10_9PEZI_694573 are exactly identical! WARNING: Sequences tr_A0A1S4CAW1_A0A1S4CAW1_TOBAC_4097 and tr_A0A1U7XEI5_A0A1U7XEI5_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1B8B8E2_A0A1B8B8E2_FUSPO_36050 and tr_A0A2L2T7Q1_A0A2L2T7Q1_9HYPO_56646 are exactly identical! WARNING: Sequences tr_A0A226N5S8_A0A226N5S8_CALSU_9009 and tr_A0A226P6G2_A0A226P6G2_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2G3A6C8_A0A2G3A6C8_CAPAN_4072 and tr_A0A2G3D3T1_A0A2G3D3T1_CAPCH_80379 are exactly identical! WARNING: Duplicate sequences found: 75 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/4_raxmlng_ancestral/P49585.raxml.reduced.phy Alignment comprises 1 partitions and 367 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 367 Gaps: 22.40 % Invariant sites: 2.72 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/4_raxmlng_ancestral/P49585.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/3_mltree/P49585.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 92 / 7360 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -140588.661793 [00:00:00 -140588.661793] Initial branch length optimization [00:00:01 -118838.582229] Model parameter optimization (eps = 0.100000) [00:00:39] Tree #1, final logLikelihood: -118476.610945 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.172520,0.139939) (0.198178,0.222726) (0.310208,0.695532) (0.319093,2.243728) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/4_raxmlng_ancestral/P49585.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/4_raxmlng_ancestral/P49585.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/4_raxmlng_ancestral/P49585.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P49585/4_raxmlng_ancestral/P49585.raxml.log Analysis started: 12-Jul-2021 17:21:40 / finished: 12-Jul-2021 17:22:24 Elapsed time: 43.538 seconds Consumed energy: 2.469 Wh