RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 18-Jun-2021 00:38:30 as follows: raxml-ng --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/2_msa/P48436_trimmed_msa.fasta --data-type AA --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/3_mltree/P48436 --seed 2 --threads 2 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (2 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/2_msa/P48436_trimmed_msa.fasta [00:00:00] Loaded alignment with 996 taxa and 78 sites WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_Q9VA17_Q9VA17_DROME_7227 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_B4JYQ8_B4JYQ8_DROGR_7222 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_Q29CD5_Q29CD5_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_B4NFA9_B4NFA9_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_B3M1J0_B3M1J0_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_B4GN76_B4GN76_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_B4M5W5_B4M5W5_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_B4K6I0_B4K6I0_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_A0A0M5J5M3_A0A0M5J5M3_DROBS_30019 are exactly identical! WARNING: Sequences tr_B4QSI9_B4QSI9_DROSI_7240 and tr_A0A1W4U6X8_A0A1W4U6X8_DROFC_30025 are exactly identical! WARNING: Sequences tr_E2B1E2_E2B1E2_CAMFO_104421 and tr_A0A026WFP6_A0A026WFP6_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_E2B1E2_E2B1E2_CAMFO_104421 and tr_A0A154PP54_A0A154PP54_9HYME_178035 are exactly identical! WARNING: Sequences tr_E2B1E2_E2B1E2_CAMFO_104421 and tr_A0A195CCP2_A0A195CCP2_9HYME_456900 are exactly identical! WARNING: Sequences tr_E2B1P2_E2B1P2_CAMFO_104421 and tr_A0A158NK15_A0A158NK15_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2B1P2_E2B1P2_CAMFO_104421 and tr_F4X1J9_F4X1J9_ACREC_103372 are exactly identical! WARNING: Sequences tr_E2B1P2_E2B1P2_CAMFO_104421 and tr_A0A026VYE6_A0A026VYE6_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_E2B1P2_E2B1P2_CAMFO_104421 and tr_A0A151WTF4_A0A151WTF4_9HYME_64791 are exactly identical! WARNING: Sequences tr_E2B1P2_E2B1P2_CAMFO_104421 and tr_A0A195EK39_A0A195EK39_9HYME_471704 are exactly identical! WARNING: Sequences tr_E2B1P2_E2B1P2_CAMFO_104421 and tr_A0A195BW04_A0A195BW04_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2B1P2_E2B1P2_CAMFO_104421 and tr_A0A195F4M7_A0A195F4M7_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A087ZS64_A0A087ZS64_APIME_7460 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A158NK35_A0A158NK35_ATTCE_12957 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_F4X1K2_F4X1K2_ACREC_103372 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_E2BS23_E2BS23_HARSA_610380 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A026VYT4_A0A026VYT4_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A0M9AAC1_A0A0M9AAC1_9HYME_166423 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A151WT78_A0A151WT78_9HYME_64791 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A195EK96_A0A195EK96_9HYME_471704 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A195BW08_A0A195BW08_9HYME_520822 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A195F502_A0A195F502_9HYME_34720 are exactly identical! WARNING: Sequences tr_E2B1P3_E2B1P3_CAMFO_104421 and tr_A0A151I8Z7_A0A151I8Z7_9HYME_456900 are exactly identical! WARNING: Sequences tr_F1R1S3_F1R1S3_DANRE_7955 and tr_I3MC52_I3MC52_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_C3VV16_C3VV16_ORYLA_8090 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_M4AYX6_M4AYX6_XIPMA_8083 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_W5NLJ8_W5NLJ8_LEPOC_7918 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_A0A087YSU3_A0A087YSU3_POEFO_48698 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_A0A0N8JXW7_A0A0N8JXW7_9TELE_113540 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_A0A1S3KK65_A0A1S3KK65_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_A0A2I4AI34_A0A2I4AI34_9TELE_52670 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_A0A060Y4B1_A0A060Y4B1_ONCMY_8022 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_A0A2D0RWN4_A0A2D0RWN4_ICTPU_7998 are exactly identical! WARNING: Sequences sp_Q32PP9_SOX14_DANRE_7955 and tr_A0A2U9C5L8_A0A2U9C5L8_SCOMX_52904 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_W5NMP4_W5NMP4_LEPOC_7918 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_A0A0P7YVA8_A0A0P7YVA8_9TELE_113540 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_A0A1S3MSC1_A0A1S3MSC1_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_A0A1S3MW73_A0A1S3MW73_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_A0A1S3NY29_A0A1S3NY29_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_A0A060Y088_A0A060Y088_ONCMY_8022 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_A0A060YQG9_A0A060YQG9_ONCMY_8022 are exactly identical! WARNING: Sequences sp_Q6DGL6_SOX1A_DANRE_7955 and tr_A0A060YR41_A0A060YR41_ONCMY_8022 are exactly identical! WARNING: Sequences sp_Q6EJB7_SOX3_DANRE_7955 and tr_A0A3B5KG54_A0A3B5KG54_TAKRU_31033 are exactly identical! WARNING: Sequences sp_Q6EJB7_SOX3_DANRE_7955 and tr_W5NLT9_W5NLT9_LEPOC_7918 are exactly identical! WARNING: Sequences sp_Q6EJB7_SOX3_DANRE_7955 and tr_A0A1S3RTX5_A0A1S3RTX5_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q6EJB7_SOX3_DANRE_7955 and tr_A0A1S3STQ3_A0A1S3STQ3_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q6EJB7_SOX3_DANRE_7955 and tr_A0A060WMX3_A0A060WMX3_ONCMY_8022 are exactly identical! WARNING: Sequences sp_Q6EJB7_SOX3_DANRE_7955 and tr_A0A060XCS5_A0A060XCS5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A1D5PBR4_A0A1D5PBR4_CHICK_9031 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_M3Y0P3_M3Y0P3_MUSPF_9669 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_H2PI18_H2PI18_PONAB_9601 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_F6WHW4_F6WHW4_MONDO_13616 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_W5PIE5_W5PIE5_SHEEP_9940 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_H0W7J3_H0W7J3_CAVPO_10141 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_G3WBV5_G3WBV5_SARHA_9305 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_H3A415_H3A415_LATCH_7897 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_G1LXC4_G1LXC4_AILME_9646 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_U3KGF4_U3KGF4_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_W5NP80_W5NP80_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A151NF91_A0A151NF91_ALLMI_8496 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A1S3GP47_A0A1S3GP47_DIPOR_10020 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A1U7UGJ3_A0A1U7UGJ3_TARSY_1868482 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A218V0M4_A0A218V0M4_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A226NKP4_A0A226NKP4_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A2R9C575_A0A2R9C575_PANPA_9597 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A2Y9RRA2_A0A2Y9RRA2_TRIMA_127582 are exactly identical! WARNING: Sequences tr_Q6P0Z4_Q6P0Z4_DANRE_7955 and tr_A0A384BC17_A0A384BC17_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and sp_Q811W0_SOX21_MOUSE_10090 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_M3YK79_M3YK79_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_G3RV32_G3RV32_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_H2NK54_H2NK54_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_F7GJS8_F7GJS8_MONDO_13616 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_M4AYS5_M4AYS5_XIPMA_8083 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_I3KZ58_I3KZ58_ORENI_8128 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_H0XS41_H0XS41_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A3B5KJ66_A0A3B5KJ66_TAKRU_31033 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and sp_Q9Y651_SOX21_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A1D5Q2F1_A0A1D5Q2F1_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_G3NJA1_G3NJA1_GASAC_69293 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_G3WW72_G3WW72_SARHA_9305 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2R8M5Q0_A0A2R8M5Q0_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_F2Z520_F2Z520_PIG_9823 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_H3ACQ6_H3ACQ6_LATCH_7897 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_E1BHN5_E1BHN5_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_L5KHK0_L5KHK0_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A337SPQ4_A0A337SPQ4_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_U3KLB6_U3KLB6_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_W5NMM8_W5NMM8_LEPOC_7918 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A087YQH6_A0A087YQH6_POEFO_48698 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A0D9SA80_A0A0D9SA80_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A0Q3M4K4_A0A0Q3M4K4_AMAAE_12930 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A1S3P074_A0A1S3P074_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A1S3PMG1_A0A1S3PMG1_SALSA_8030 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A1U8CAT8_A0A1U8CAT8_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2I4CFI5_A0A2I4CFI5_9TELE_52670 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A060WTL2_A0A060WTL2_ONCMY_8022 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A060ZA93_A0A060ZA93_ONCMY_8022 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A218VAW0_A0A218VAW0_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2K5KLQ7_A0A2K5KLQ7_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2K6ARY4_A0A2K6ARY4_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2U4A6V4_A0A2U4A6V4_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2U3WIY9_A0A2U3WIY9_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2U3YIU1_A0A2U3YIU1_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2U9CAD7_A0A2U9CAD7_SCOMX_52904 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2Y9DCE7_A0A2Y9DCE7_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2Y9JDE3_A0A2Y9JDE3_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2Y9NI67_A0A2Y9NI67_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q6RVD7_SX21B_DANRE_7955 and tr_A0A2Y9STB0_A0A2Y9STB0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_Q6TEN5_Q6TEN5_DANRE_7955 and tr_A0A3B3H670_A0A3B3H670_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q6TEN5_Q6TEN5_DANRE_7955 and tr_W5NJA6_W5NJA6_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q6TEN5_Q6TEN5_DANRE_7955 and tr_A0A087XVX1_A0A087XVX1_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q6TEN5_Q6TEN5_DANRE_7955 and tr_A0A0P7XLU6_A0A0P7XLU6_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q6TEN5_Q6TEN5_DANRE_7955 and tr_A0A2U9CTF7_A0A2U9CTF7_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q90XD1_Q90XD1_DANRE_7955 and tr_I3KNM8_I3KNM8_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A3B5Q378_A0A3B5Q378_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_I3KUB4_I3KUB4_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_G3NQ77_G3NQ77_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A3B1KI07_A0A3B1KI07_ASTMX_7994 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_W5N425_W5N425_LEPOC_7918 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A096M6T3_A0A096M6T3_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A0P7WNV2_A0A0P7WNV2_9TELE_113540 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A1S3NEK9_A0A1S3NEK9_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A1S3Q425_A0A1S3Q425_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A1S3S1M7_A0A1S3S1M7_SALSA_8030 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_I3QHH4_I3QHH4_XENLA_8355 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A2I4AJW6_A0A2I4AJW6_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A060XPC0_A0A060XPC0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A060Y9I8_A0A060Y9I8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A060YYC0_A0A060YYC0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A2D0QA56_A0A2D0QA56_ICTPU_7998 are exactly identical! WARNING: Sequences tr_Q9DFH1_Q9DFH1_DANRE_7955 and tr_A0A2U9CL41_A0A2U9CL41_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_H2LV56_H2LV56_ORYLA_8090 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_M4ACG0_M4ACG0_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_I3JCM7_I3JCM7_ORENI_8128 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_A0A3B5KH67_A0A3B5KH67_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_H2VEF0_H2VEF0_TAKRU_31033 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_H3C5T1_H3C5T1_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_H3CPN6_H3CPN6_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_A0A087XTM4_A0A087XTM4_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_A0A2I4BCP3_A0A2I4BCP3_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q9DFH2_Q9DFH2_DANRE_7955 and tr_A0A1Y0DJ48_A0A1Y0DJ48_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A1D5NZD9_A0A1D5NZD9_CHICK_9031 and tr_H0ZLA1_H0ZLA1_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A1D5NZD9_A0A1D5NZD9_CHICK_9031 and tr_U3JVA2_U3JVA2_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5NZD9_A0A1D5NZD9_CHICK_9031 and tr_A0A218VCP0_A0A218VCP0_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A1D5PVF7_A0A1D5PVF7_CHICK_9031 and tr_A0A218UG33_A0A218UG33_9PASE_299123 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and sp_P57074_SOX8_CHICK_9031 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_G1N183_G1N183_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_F6XIA1_F6XIA1_MONDO_13616 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_G3WXG4_G3WXG4_SARHA_9305 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_H0Z900_H0Z900_TAEGU_59729 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_H3BAG2_H3BAG2_LATCH_7897 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_U3KGU9_U3KGU9_FICAL_59894 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A3B1INR1_A0A3B1INR1_ASTMX_7994 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A151N207_A0A151N207_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A0Q3XBK4_A0A0Q3XBK4_AMAAE_12930 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A2I0LTM2_A0A2I0LTM2_COLLI_8932 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A1S3RBK7_A0A1S3RBK7_SALSA_8030 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_Q2PZ13_Q2PZ13_SALSA_8030 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A1L8EYP0_A0A1L8EYP0_XENLA_8355 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A3Q0GL30_A0A3Q0GL30_ALLSI_38654 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A1V4KSR0_A0A1V4KSR0_PATFA_372326 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A060Y2K7_A0A060Y2K7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A218UW41_A0A218UW41_9PASE_299123 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A226NN65_A0A226NN65_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A226PPA0_A0A226PPA0_COLVI_9014 are exactly identical! WARNING: Sequences tr_F1P1Z5_F1P1Z5_CHICK_9031 and tr_A0A2D0QC19_A0A2D0QC19_ICTPU_7998 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_K7EXN5_K7EXN5_PELSI_13735 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_H0ZJW3_H0ZJW3_TAEGU_59729 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_H3ACM9_H3ACM9_LATCH_7897 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_U3KIZ4_U3KIZ4_FICAL_59894 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_R0KWE0_R0KWE0_ANAPL_8839 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A0Q3PJC3_A0A0Q3PJC3_AMAAE_12930 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A091EYU2_A0A091EYU2_CORBR_85066 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A091K6J2_A0A091K6J2_EGRGA_188379 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A093PXB6_A0A093PXB6_9PASS_328815 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A087RJ12_A0A087RJ12_APTFO_9233 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A093HWE3_A0A093HWE3_STRCA_441894 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A099YUM4_A0A099YUM4_TINGU_94827 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A091GLG9_A0A091GLG9_9AVES_55661 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A0A0A2A4_A0A0A0A2A4_CHAVO_50402 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A2I0MBE9_A0A2I0MBE9_COLLI_8932 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A093GRJ8_A0A093GRJ8_DRYPU_118200 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A091HZF1_A0A091HZF1_CALAN_9244 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A1U7RFS2_A0A1U7RFS2_ALLSI_38654 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A226MZU5_A0A226MZU5_CALSU_9009 are exactly identical! WARNING: Sequences sp_P48430_SOX2_CHICK_9031 and tr_A0A226PSS4_A0A226PSS4_COLVI_9014 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and sp_Q04887_SOX9_MOUSE_10090 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_M3YS85_M3YS85_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2I3G6W7_A0A2I3G6W7_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G3GTI9_G3GTI9_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G3RLX8_G3RLX8_GORGO_9595 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_H2NUK1_H2NUK1_PONAB_9601 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G1N4C7_G1N4C7_MELGA_9103 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G1T1P0_G1T1P0_RABIT_9986 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and sp_Q7YRJ7_SOX9_CANLF_9615 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_H2QDR6_H2QDR6_PANTR_9598 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_F6XW69_F6XW69_ORNAN_9258 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_F7E3K1_F7E3K1_MONDO_13616 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_F6XLD1_F6XLD1_HORSE_9796 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_F1LYL9_F1LYL9_RAT_10116 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_I3N9S6_I3N9S6_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_H0Y233_H0Y233_OTOGA_30611 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and sp_P48436_SOX9_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_F6PPG2_F6PPG2_MACMU_9544 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and sp_P61753_SOX9_MACMU_9544 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G5AV36_G5AV36_HETGA_10181 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_K7GF94_K7GF94_PELSI_13735 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G3SNK4_G3SNK4_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G3X192_G3X192_SARHA_9305 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_H0YXE0_H0YXE0_TAEGU_59729 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and sp_Q9BG91_SOX9_CALJA_9483 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_U3CPN1_U3CPN1_CALJA_9483 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_F1RV30_F1RV30_PIG_9823 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and sp_O18896_SOX9_PIG_9823 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_H3BHH2_H3BHH2_LATCH_7897 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G1MEX1_G1MEX1_AILME_9646 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_G7PVA3_G7PVA3_MACFA_9541 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_L5KP74_L5KP74_PTEAL_9402 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A337SCT0_A0A337SCT0_FELCA_9685 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A096NU47_A0A096NU47_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A091D5J2_A0A091D5J2_FUKDA_885580 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A0D9QWJ2_A0A0D9QWJ2_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_Q9YGP7_Q9YGP7_ALLMI_8496 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A091E8L7_A0A091E8L7_CORBR_85066 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A091V787_A0A091V787_NIPNI_128390 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A087RA62_A0A087RA62_APTFO_9233 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A099ZEP0_A0A099ZEP0_TINGU_94827 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2I0M7F1_A0A2I0M7F1_COLLI_8932 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A093G868_A0A093G868_DRYPU_118200 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A091HYX8_A0A091HYX8_CALAN_9244 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A1U7SCS0_A0A1U7SCS0_ALLSI_38654 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A1U7QDG5_A0A1U7QDG5_MESAU_10036 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A1V4KVN6_A0A1V4KVN6_PATFA_372326 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A218U845_A0A218U845_9PASE_299123 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A226MR05_A0A226MR05_CALSU_9009 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A226P6C1_A0A226P6C1_COLVI_9014 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2K5N5T1_A0A2K5N5T1_CERAT_9531 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2K6DT16_A0A2K6DT16_MACNE_9545 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2U3W1N2_A0A2U3W1N2_ODORO_9708 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2Y9DGM6_A0A2Y9DGM6_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2Y9KWM5_A0A2Y9KWM5_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2Y9PEX3_A0A2Y9PEX3_DELLE_9749 are exactly identical! WARNING: Sequences sp_P48434_SOX9_CHICK_9031 and tr_A0A2Y9TDT6_A0A2Y9TDT6_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and sp_Q04888_SOX10_MOUSE_10090 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_M3YNM2_M3YNM2_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2I3FSV3_A0A2I3FSV3_NOMLE_61853 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_G1PPS4_G1PPS4_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_G3RTX9_G3RTX9_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_H9GM37_H9GM37_ANOCA_28377 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_G1T2J3_G1T2J3_RABIT_9986 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_F1PHT3_F1PHT3_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2J8LNY1_A0A2J8LNY1_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_H9H793_H9H793_MONDO_13616 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_F6WZU9_F6WZU9_HORSE_9796 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_W5PZF9_W5PZF9_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and sp_O55170_SOX10_RAT_10116 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_I3MYB5_I3MYB5_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_H0XRV1_H0XRV1_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A286XA74_A0A286XA74_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and sp_P56693_SOX10_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_K7G5M4_K7G5M4_PELSI_13735 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_G3U829_G3U829_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_H0ZJN2_H0ZJN2_TAEGU_59729 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_F6XMN9_F6XMN9_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A286ZW65_A0A286ZW65_PIG_9823 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and sp_A5A763_SOX10_PIG_9823 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_G1LUY0_G1LUY0_AILME_9646 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_F1N6W0_F1N6W0_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_L5KI89_L5KI89_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_M3VZ63_M3VZ63_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_U3KE06_U3KE06_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_U3J6F2_U3J6F2_ANAPL_8839 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A096NK02_A0A096NK02_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A091E054_A0A091E054_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A0D9R3E1_A0A0D9R3E1_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A151NHP7_A0A151NHP7_ALLMI_8496 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A0Q3QTL1_A0A0Q3QTL1_AMAAE_12930 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A091EXG0_A0A091EXG0_CORBR_85066 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A091INF5_A0A091INF5_EGRGA_188379 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A091W1J1_A0A091W1J1_NIPNI_128390 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A087QLP9_A0A087QLP9_APTFO_9233 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A093H8F3_A0A093H8F3_STRCA_441894 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A099ZSP9_A0A099ZSP9_TINGU_94827 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A091GH65_A0A091GH65_9AVES_55661 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A0A0A9H3_A0A0A0A9H3_CHAVO_50402 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_R7VQH0_R7VQH0_COLLI_8932 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A093GF93_A0A093GF93_DRYPU_118200 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A091HL92_A0A091HL92_CALAN_9244 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A1S2ZHC1_A0A1S2ZHC1_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A1U7T350_A0A1U7T350_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A1U7RMD3_A0A1U7RMD3_ALLSI_38654 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A1U7QGF2_A0A1U7QGF2_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A1V4JAX1_A0A1V4JAX1_PATFA_372326 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A218UYN3_A0A218UYN3_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A226MZW2_A0A226MZW2_CALSU_9009 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A226PCU3_A0A226PCU3_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2K5L248_A0A2K5L248_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2K6DCL5_A0A2K6DCL5_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2R9A0H5_A0A2R9A0H5_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2U3WP77_A0A2U3WP77_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2U3YWQ9_A0A2U3YWQ9_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2Y9DGE7_A0A2Y9DGE7_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2Y9KM56_A0A2Y9KM56_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2Y9QB75_A0A2Y9QB75_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A2Y9EYU4_A0A2Y9EYU4_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q9W757_SOX10_CHICK_9031 and tr_A0A384AP26_A0A384AP26_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q9W7R5_SOX21_CHICK_9031 and tr_A0A151NRH8_A0A151NRH8_ALLMI_8496 are exactly identical! WARNING: Sequences sp_Q9W7R5_SOX21_CHICK_9031 and tr_A0A226M6J9_A0A226M6J9_CALSU_9009 are exactly identical! WARNING: Sequences sp_Q9W7R5_SOX21_CHICK_9031 and tr_A0A226MUU1_A0A226MUU1_CALSU_9009 are exactly identical! WARNING: Sequences sp_Q9W7R5_SOX21_CHICK_9031 and tr_A0A226NYS8_A0A226NYS8_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and sp_Q04892_SOX14_MOUSE_10090 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_M3Z4N2_M3Z4N2_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G1SBJ0_G1SBJ0_NOMLE_61853 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G3HEY5_G3HEY5_CRIGR_10029 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G3RDD2_G3RDD2_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_H2PBI9_H2PBI9_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G1TJ86_G1TJ86_RABIT_9986 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2I3TV57_A0A2I3TV57_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_F6XNT3_F6XNT3_MONDO_13616 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_W5Q1Z3_W5Q1Z3_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_B7SZV3_B7SZV3_RAT_10116 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A287D385_A0A287D385_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_H0WE30_H0WE30_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and sp_O95416_SOX14_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_F7HQE3_F7HQE3_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G5BC40_G5BC40_HETGA_10181 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G3SSE7_G3SSE7_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G3WHS5_G3WHS5_SARHA_9305 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_H0Z8W5_H0Z8W5_TAEGU_59729 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and sp_A4QNG3_SOX14_XENTR_8364 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2R8P701_A0A2R8P701_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_H3AVL8_H3AVL8_LATCH_7897 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_G7P040_G7P040_MACFA_9541 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_L5KZV5_L5KZV5_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2I2U9L9_A0A2I2U9L9_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_U3KIG3_U3KIG3_FICAL_59894 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_U3HYI1_U3HYI1_ANAPL_8839 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A096MSU2_A0A096MSU2_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A091EBT3_A0A091EBT3_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A0D9SC48_A0A0D9SC48_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A151NGX8_A0A151NGX8_ALLMI_8496 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A0Q3PLH6_A0A0Q3PLH6_AMAAE_12930 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A093Q8L4_A0A093Q8L4_9PASS_328815 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A093J9H0_A0A093J9H0_STRCA_441894 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A091XRL3_A0A091XRL3_OPIHO_30419 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A0A0AMQ0_A0A0A0AMQ0_CHAVO_50402 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A093GCB4_A0A093GCB4_DRYPU_118200 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A091HR26_A0A091HR26_CALAN_9244 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1S2ZMY7_A0A1S2ZMY7_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1S3GQ94_A0A1S3GQ94_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1L8G4Z6_A0A1L8G4Z6_XENLA_8355 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1L8GB57_A0A1L8GB57_XENLA_8355 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1U7T8B1_A0A1U7T8B1_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1U7RC23_A0A1U7RC23_ALLSI_38654 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1U7QSF6_A0A1U7QSF6_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A1V4KQX0_A0A1V4KQX0_PATFA_372326 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A218UEN1_A0A218UEN1_9PASE_299123 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A226NCN2_A0A226NCN2_CALSU_9009 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A226PUW5_A0A226PUW5_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2K5KS53_A0A2K5KS53_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2K6ANL6_A0A2K6ANL6_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2K5XVC7_A0A2K5XVC7_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2R8ZCF2_A0A2R8ZCF2_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2U4B8W6_A0A2U4B8W6_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2U3WV20_A0A2U3WV20_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2U3X925_A0A2U3X925_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2Y9DUM9_A0A2Y9DUM9_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2Y9KGL2_A0A2Y9KGL2_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2Y9NT43_A0A2Y9NT43_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A2Y9FBD0_A0A2Y9FBD0_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A384DHB9_A0A384DHB9_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q9W7R6_SOX14_CHICK_9031 and tr_A0A383Z5H6_A0A383Z5H6_BALAS_310752 are exactly identical! WARNING: Sequences sp_P40646_SOX7_MOUSE_10090 and tr_K7ESR9_K7ESR9_PONAB_9601 are exactly identical! WARNING: Sequences sp_P40646_SOX7_MOUSE_10090 and tr_D3ZTE1_D3ZTE1_RAT_10116 are exactly identical! WARNING: Sequences sp_P40646_SOX7_MOUSE_10090 and tr_A0A2U3XQK6_A0A2U3XQK6_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P43680_SOX18_MOUSE_10090 and tr_G3IBT0_G3IBT0_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P43680_SOX18_MOUSE_10090 and tr_Q4V7E4_Q4V7E4_RAT_10116 are exactly identical! WARNING: Sequences sp_P43680_SOX18_MOUSE_10090 and tr_A0A1U7QWJ8_A0A1U7QWJ8_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_M3YWS7_M3YWS7_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_G1PTM0_G1PTM0_MYOLU_59463 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_G3HBV8_G3HBV8_CRIGR_10029 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_G3S0X8_G3S0X8_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_H2NPN0_H2NPN0_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_H9GAY8_H9GAY8_ANOCA_28377 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_H2QA91_H2QA91_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_W5PYJ2_W5PYJ2_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_D3ZR96_D3ZR96_RAT_10116 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_H0XPG0_H0XPG0_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_H0UZ27_H0UZ27_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and sp_P57073_SOX8_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_F6WQQ2_F6WQQ2_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A286ZU14_A0A286ZU14_PIG_9823 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_F1MBL5_F1MBL5_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2I2V1Z6_A0A2I2V1Z6_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_W5M149_W5M149_LEPOC_7918 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A096NKL6_A0A096NKL6_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A091DRK7_A0A091DRK7_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A0D9RHJ2_A0A0D9RHJ2_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A1S3A1Y0_A0A1S3A1Y0_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A1L8ER49_A0A1L8ER49_XENLA_8355 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A1U7R5V6_A0A1U7R5V6_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2K5N2B7_A0A2K5N2B7_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2K6DE05_A0A2K6DE05_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2U4AK12_A0A2U4AK12_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2U3W517_A0A2U3W517_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2U3Y6D3_A0A2U3Y6D3_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2Y9KM00_A0A2Y9KM00_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2Y9PTC3_A0A2Y9PTC3_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A2Y9EE02_A0A2Y9EE02_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q04886_SOX8_MOUSE_10090 and tr_A0A384A3K2_A0A384A3K2_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_H2P1I0_H2P1I0_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_E2RH58_E2RH58_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_K7CW19_K7CW19_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_D3ZZ13_D3ZZ13_RAT_10116 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_H0XKX2_H0XKX2_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A286X7U6_A0A286X7U6_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and sp_O15370_SOX12_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A1D5QB43_A0A1D5QB43_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2R8ML84_A0A2R8ML84_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_I3LK63_I3LK63_PIG_9823 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A337RVV8_A0A337RVV8_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A096N4N0_A0A096N4N0_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A0D9SBP5_A0A0D9SBP5_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A1S2ZQT1_A0A1S2ZQT1_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A3Q0C9F2_A0A3Q0C9F2_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2K5L3D6_A0A2K5L3D6_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2K6ATW4_A0A2K6ATW4_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2U3VAD4_A0A2U3VAD4_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2U3VEI1_A0A2U3VEI1_ODORO_9708 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2U3X7Y7_A0A2U3X7Y7_LEPWE_9713 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2Y9D9W8_A0A2Y9D9W8_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2Y9IPI9_A0A2Y9IPI9_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2Y9PZ92_A0A2Y9PZ92_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q04890_SOX12_MOUSE_10090 and tr_A0A2Y9T670_A0A2Y9T670_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_G3S507_G3S507_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_H2PQB5_H2PQB5_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_H2QW62_H2QW62_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_G3V923_G3V923_RAT_10116 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_H0XM42_H0XM42_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_H0UUZ2_H0UUZ2_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and sp_Q9H6I2_SOX17_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_G3UCN5_G3UCN5_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A2R8N6U9_A0A2R8N6U9_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_F1RSI1_F1RSI1_PIG_9823 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_G1LYX1_G1LYX1_AILME_9646 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_G7PBU8_G7PBU8_MACFA_9541 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_F1N1F9_F1N1F9_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_L5JUZ8_L5JUZ8_PTEAL_9402 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A337RUQ0_A0A337RUQ0_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A096MV92_A0A096MV92_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A1S2Z9R2_A0A1S2Z9R2_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A1S3EMN3_A0A1S3EMN3_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A1U7RF78_A0A1U7RF78_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A2K6CCT3_A0A2K6CCT3_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A2R8Z6H5_A0A2R8Z6H5_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A2U4AJ34_A0A2U4AJ34_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A2Y9DEJ4_A0A2Y9DEJ4_TRIMA_127582 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A2Y9M570_A0A2Y9M570_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q61473_SOX17_MOUSE_10090 and tr_A0A2Y9SXF2_A0A2Y9SXF2_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3YDA1_M3YDA1_MUSPF_9669 and tr_H0WXT4_H0WXT4_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3YDA1_M3YDA1_MUSPF_9669 and tr_A0A096P2R3_A0A096P2R3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YDA1_M3YDA1_MUSPF_9669 and tr_A0A2U3VT99_A0A2U3VT99_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YDA1_M3YDA1_MUSPF_9669 and tr_A0A2U3Y5G9_A0A2U3Y5G9_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YDA1_M3YDA1_MUSPF_9669 and tr_A0A2Y9L2S9_A0A2Y9L2S9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A1Z2WUV9_A0A1Z2WUV9_ORYLA_8090 and tr_A0A3B1ISY8_A0A3B1ISY8_ASTMX_7994 are exactly identical! WARNING: Sequences tr_A0A1Z2WUV9_A0A1Z2WUV9_ORYLA_8090 and tr_A0A3B1IU21_A0A3B1IU21_ASTMX_7994 are exactly identical! WARNING: Sequences tr_A0A1Z2WUV9_A0A1Z2WUV9_ORYLA_8090 and tr_A0A0P7V0T3_A0A0P7V0T3_9TELE_113540 are exactly identical! WARNING: Sequences tr_A0A1Z2WUV9_A0A1Z2WUV9_ORYLA_8090 and tr_A0A2D0S116_A0A2D0S116_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_M4AZB1_M4AZB1_XIPMA_8083 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_I3KY88_I3KY88_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_Q6WNT5_Q6WNT5_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_Q4SIN0_Q4SIN0_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_A0A087XH71_A0A087XH71_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_A0A1S3LZ60_A0A1S3LZ60_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_A0A2I4AIG3_A0A2I4AIG3_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_A0A060Z6M0_A0A060Z6M0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A3B3HT05_A0A3B3HT05_ORYLA_8090 and tr_A0A2U9BLI9_A0A2U9BLI9_SCOMX_52904 are exactly identical! WARNING: Sequences tr_C3VV12_C3VV12_ORYLA_8090 and tr_M3ZRM7_M3ZRM7_XIPMA_8083 are exactly identical! WARNING: Sequences tr_C3VV12_C3VV12_ORYLA_8090 and tr_I3JCM1_I3JCM1_ORENI_8128 are exactly identical! WARNING: Sequences tr_C3VV12_C3VV12_ORYLA_8090 and tr_A0A087XU91_A0A087XU91_POEFO_48698 are exactly identical! WARNING: Sequences tr_C3VV12_C3VV12_ORYLA_8090 and tr_A0A2I4BCP9_A0A2I4BCP9_9TELE_52670 are exactly identical! WARNING: Sequences tr_C3VV12_C3VV12_ORYLA_8090 and tr_A0A2U9CQU2_A0A2U9CQU2_SCOMX_52904 are exactly identical! WARNING: Sequences tr_C3VV13_C3VV13_ORYLA_8090 and tr_H2T8B8_H2T8B8_TAKRU_31033 are exactly identical! WARNING: Sequences tr_C3VV13_C3VV13_ORYLA_8090 and tr_H3CZS1_H3CZS1_TETNG_99883 are exactly identical! WARNING: Sequences tr_C3VV13_C3VV13_ORYLA_8090 and tr_A0A2U9CPU5_A0A2U9CPU5_SCOMX_52904 are exactly identical! WARNING: Sequences tr_C3VV17_C3VV17_ORYLA_8090 and tr_Q6WNS5_Q6WNS5_TAKRU_31033 are exactly identical! WARNING: Sequences tr_C3VV17_C3VV17_ORYLA_8090 and tr_H3DIC0_H3DIC0_TETNG_99883 are exactly identical! WARNING: Sequences tr_C3VV17_C3VV17_ORYLA_8090 and tr_A0A2U9CMZ3_A0A2U9CMZ3_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2LJV9_H2LJV9_ORYLA_8090 and tr_M4A5D2_M4A5D2_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2LJV9_H2LJV9_ORYLA_8090 and tr_G3NTT5_G3NTT5_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2LJV9_H2LJV9_ORYLA_8090 and tr_A0A087YEH4_A0A087YEH4_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2LJV9_H2LJV9_ORYLA_8090 and tr_A0A2U9AZB0_A0A2U9AZB0_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2M836_H2M836_ORYLA_8090 and tr_M4B0D0_M4B0D0_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2M836_H2M836_ORYLA_8090 and tr_I3KZS2_I3KZS2_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2M836_H2M836_ORYLA_8090 and tr_G3NRV5_G3NRV5_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2M836_H2M836_ORYLA_8090 and tr_A0A087YRN8_A0A087YRN8_POEFO_48698 are exactly identical! WARNING: Sequences tr_H2M836_H2M836_ORYLA_8090 and tr_A0A2I4CSB7_A0A2I4CSB7_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2M836_H2M836_ORYLA_8090 and tr_W5UF16_W5UF16_ICTPU_7998 are exactly identical! WARNING: Sequences tr_H2M836_H2M836_ORYLA_8090 and tr_A0A2U9C3D4_A0A2U9C3D4_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2M9H2_H2M9H2_ORYLA_8090 and tr_M4AZT5_M4AZT5_XIPMA_8083 are exactly identical! WARNING: Sequences tr_H2M9H2_H2M9H2_ORYLA_8090 and tr_G3NEM6_G3NEM6_GASAC_69293 are exactly identical! WARNING: Sequences tr_H2M9H2_H2M9H2_ORYLA_8090 and tr_W5LU80_W5LU80_ASTMX_7994 are exactly identical! WARNING: Sequences tr_H2M9H2_H2M9H2_ORYLA_8090 and tr_A0A2I4BHE3_A0A2I4BHE3_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2M9H2_H2M9H2_ORYLA_8090 and tr_A0A2D0R236_A0A2D0R236_ICTPU_7998 are exactly identical! WARNING: Sequences tr_H2M9H2_H2M9H2_ORYLA_8090 and tr_A0A2U9CBE9_A0A2U9CBE9_SCOMX_52904 are exactly identical! WARNING: Sequences tr_Q9PT76_Q9PT76_ORYLA_8090 and tr_M4AYL9_M4AYL9_XIPMA_8083 are exactly identical! WARNING: Sequences tr_Q9PT76_Q9PT76_ORYLA_8090 and tr_G3PYK1_G3PYK1_GASAC_69293 are exactly identical! WARNING: Sequences tr_Q9PT76_Q9PT76_ORYLA_8090 and tr_A0A087YS71_A0A087YS71_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q9PT76_Q9PT76_ORYLA_8090 and tr_A0A2I4AY38_A0A2I4AY38_9TELE_52670 are exactly identical! WARNING: Sequences tr_Q9PT76_Q9PT76_ORYLA_8090 and tr_A0A2U9C5V8_A0A2U9C5V8_SCOMX_52904 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and tr_G3SA93_G3SA93_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and tr_A0A2J8KPH4_A0A2J8KPH4_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and sp_O60248_SOX15_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and tr_G7PTI4_G7PTI4_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and tr_A0A0D9RG54_A0A0D9RG54_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and tr_A0A2K5NCK4_A0A2K5NCK4_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and tr_A0A2K6D1T5_A0A2K6D1T5_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1REV6_G1REV6_NOMLE_61853 and tr_A0A2K6A9Y5_A0A2K6A9Y5_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_E2R3H4_E2R3H4_CANLF_9615 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_F7E2Q6_F7E2Q6_HORSE_9796 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_I3M6F6_I3M6F6_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_G3SMZ5_G3SMZ5_LOXAF_9785 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_F1ST29_F1ST29_PIG_9823 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_L5JXN1_L5JXN1_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_M3WBS1_M3WBS1_FELCA_9685 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_A0A2Y9PWG0_A0A2Y9PWG0_DELLE_9749 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_A0A2Y9EF37_A0A2Y9EF37_PHYCD_9755 are exactly identical! WARNING: Sequences tr_G1P054_G1P054_MYOLU_59463 and tr_A0A383YUC3_A0A383YUC3_BALAS_310752 are exactly identical! WARNING: Sequences tr_G1QC03_G1QC03_MYOLU_59463 and tr_U3J0D5_U3J0D5_ANAPL_8839 are exactly identical! WARNING: Sequences tr_G1QC03_G1QC03_MYOLU_59463 and tr_A0A2K6ADF8_A0A2K6ADF8_MANLE_9568 are exactly identical! WARNING: Sequences tr_Q20201_Q20201_CAEEL_6239 and tr_G0MB92_G0MB92_CAEBE_135651 are exactly identical! WARNING: Sequences tr_Q20201_Q20201_CAEEL_6239 and tr_E3MC38_E3MC38_CAERE_31234 are exactly identical! WARNING: Sequences tr_Q20201_Q20201_CAEEL_6239 and tr_A8X4J1_A8X4J1_CAEBR_6238 are exactly identical! WARNING: Sequences tr_Q20201_Q20201_CAEEL_6239 and tr_A0A1I7TN07_A0A1I7TN07_9PELO_1561998 are exactly identical! WARNING: Sequences tr_Q20201_Q20201_CAEEL_6239 and tr_A0A261CMI7_A0A261CMI7_9PELO_1503980 are exactly identical! WARNING: Sequences tr_Q20201_Q20201_CAEEL_6239 and tr_A0A2G5T0I9_A0A2G5T0I9_9PELO_1611254 are exactly identical! WARNING: Sequences tr_H2QKU0_H2QKU0_PANTR_9598 and tr_I3N0H2_I3N0H2_ICTTR_43179 are exactly identical! WARNING: Sequences tr_H2QKU0_H2QKU0_PANTR_9598 and sp_P35713_SOX18_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2QKU0_H2QKU0_PANTR_9598 and tr_F7FV06_F7FV06_CALJA_9483 are exactly identical! WARNING: Sequences tr_H2QKU0_H2QKU0_PANTR_9598 and tr_A0A096NN29_A0A096NN29_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H2QKU0_H2QKU0_PANTR_9598 and tr_A0A2K5MF01_A0A2K5MF01_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6VU03_F6VU03_MONDO_13616 and tr_G3VPA1_G3VPA1_SARHA_9305 are exactly identical! WARNING: Sequences tr_F7G0D1_F7G0D1_MONDO_13616 and tr_G3WCX2_G3WCX2_SARHA_9305 are exactly identical! WARNING: Sequences tr_W5PYX2_W5PYX2_SHEEP_9940 and tr_G1LWY8_G1LWY8_AILME_9646 are exactly identical! WARNING: Sequences tr_W5PYX2_W5PYX2_SHEEP_9940 and tr_A0A3Q0E395_A0A3Q0E395_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A3B5PV88_A0A3B5PV88_XIPMA_8083 and tr_A0A087Y3K5_A0A087Y3K5_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5PV88_A0A3B5PV88_XIPMA_8083 and tr_A0A0P7UY05_A0A0P7UY05_9TELE_113540 are exactly identical! WARNING: Sequences tr_A0A3B5PV88_A0A3B5PV88_XIPMA_8083 and tr_A0A2I4AY41_A0A2I4AY41_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B5Q1I2_A0A3B5Q1I2_XIPMA_8083 and tr_A0A087X2X9_A0A087X2X9_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5R3P7_A0A3B5R3P7_XIPMA_8083 and tr_A0A087YIL9_A0A087YIL9_POEFO_48698 are exactly identical! WARNING: Sequences tr_M3ZIP0_M3ZIP0_XIPMA_8083 and tr_A0A087Y784_A0A087Y784_POEFO_48698 are exactly identical! WARNING: Sequences tr_M3ZPT6_M3ZPT6_XIPMA_8083 and tr_I3KDV1_I3KDV1_ORENI_8128 are exactly identical! WARNING: Sequences tr_A4GU08_A4GU08_ORENI_8128 and tr_Q6WNT8_Q6WNT8_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A4GU08_A4GU08_ORENI_8128 and tr_Q4SV91_Q4SV91_TETNG_99883 are exactly identical! WARNING: Sequences tr_A4GU08_A4GU08_ORENI_8128 and tr_A0A0P7XKK6_A0A0P7XKK6_9TELE_113540 are exactly identical! WARNING: Sequences tr_I3KX86_I3KX86_ORENI_8128 and tr_A0A3B5KF53_A0A3B5KF53_TAKRU_31033 are exactly identical! WARNING: Sequences tr_I3KX86_I3KX86_ORENI_8128 and tr_Q4S0P5_Q4S0P5_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2RIZ8_H2RIZ8_TAKRU_31033 and tr_Q4T3F4_Q4T3F4_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q6WNT1_Q6WNT1_TAKRU_31033 and tr_H3CWK9_H3CWK9_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q6WNT1_Q6WNT1_TAKRU_31033 and sp_Q6IZ48_SOX8_TETNG_99883 are exactly identical! WARNING: Sequences tr_Q6WNT3_Q6WNT3_TAKRU_31033 and tr_H3CW60_H3CW60_TETNG_99883 are exactly identical! WARNING: Sequences tr_A0A2H2IM93_A0A2H2IM93_CAEJA_281687 and tr_G0NL03_G0NL03_CAEBE_135651 are exactly identical! WARNING: Sequences tr_K1QKM6_K1QKM6_CRAGI_29159 and tr_A0A210QV71_A0A210QV71_MIZYE_6573 are exactly identical! WARNING: Sequences tr_A0A0H5S245_A0A0H5S245_BRUMA_6279 and tr_A0A2K6VYH7_A0A2K6VYH7_ONCVO_6282 are exactly identical! WARNING: Sequences tr_A0A0H5S245_A0A0H5S245_BRUMA_6279 and tr_A0A0N4TQT5_A0A0N4TQT5_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0H5S245_A0A0H5S245_BRUMA_6279 and tr_A0A0R3RMM9_A0A0R3RMM9_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A0H5S245_A0A0H5S245_BRUMA_6279 and tr_A0A183HKX4_A0A183HKX4_9BILA_387005 are exactly identical! WARNING: Sequences tr_A0A0H5S245_A0A0H5S245_BRUMA_6279 and tr_A0A182ELX6_A0A182ELX6_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A0H5S245_A0A0H5S245_BRUMA_6279 and tr_A0A1I7VNN3_A0A1I7VNN3_LOALO_7209 are exactly identical! WARNING: Sequences tr_F7AGX3_F7AGX3_MACMU_9544 and tr_A0A2U3YND0_A0A2U3YND0_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G5B5D1_G5B5D1_HETGA_10181 and tr_A0A1S2ZNS1_A0A1S2ZNS1_ERIEU_9365 are exactly identical! WARNING: Sequences tr_A0A212F4S7_A0A212F4S7_DANPL_278856 and tr_A0A194QQ68_A0A194QQ68_PAPMA_76193 are exactly identical! WARNING: Sequences tr_A0A212F4S7_A0A212F4S7_DANPL_278856 and tr_A0A194QGS9_A0A194QGS9_PAPXU_66420 are exactly identical! WARNING: Sequences tr_D6WND1_D6WND1_TRICA_7070 and tr_E2C2Q9_E2C2Q9_HARSA_610380 are exactly identical! WARNING: Sequences tr_D6WND1_D6WND1_TRICA_7070 and tr_A0A0M9A4T7_A0A0M9A4T7_9HYME_166423 are exactly identical! WARNING: Sequences tr_D6WND1_D6WND1_TRICA_7070 and tr_A0A0L7QNL0_A0A0L7QNL0_9HYME_597456 are exactly identical! WARNING: Sequences tr_D6WND1_D6WND1_TRICA_7070 and tr_A0A1W4WKY1_A0A1W4WKY1_AGRPL_224129 are exactly identical! WARNING: Sequences tr_D6WND1_D6WND1_TRICA_7070 and tr_A0A2A3EHS8_A0A2A3EHS8_APICC_94128 are exactly identical! WARNING: Sequences tr_D6WND2_D6WND2_TRICA_7070 and tr_A0A2J7R6A1_A0A2J7R6A1_9NEOP_105785 are exactly identical! WARNING: Sequences tr_K7EZR6_K7EZR6_PELSI_13735 and tr_A0A151LZ99_A0A151LZ99_ALLMI_8496 are exactly identical! WARNING: Sequences tr_K7EZR6_K7EZR6_PELSI_13735 and tr_A0A3Q0H7C7_A0A3Q0H7C7_ALLSI_38654 are exactly identical! WARNING: Sequences tr_K7FRH6_K7FRH6_PELSI_13735 and tr_H0ZA76_H0ZA76_TAEGU_59729 are exactly identical! WARNING: Sequences tr_K7FRH6_K7FRH6_PELSI_13735 and tr_U3K6X6_U3K6X6_FICAL_59894 are exactly identical! WARNING: Sequences tr_K7FRH6_K7FRH6_PELSI_13735 and tr_A0A218US57_A0A218US57_9PASE_299123 are exactly identical! WARNING: Sequences tr_K7FRH6_K7FRH6_PELSI_13735 and tr_A0A226NK20_A0A226NK20_CALSU_9009 are exactly identical! WARNING: Sequences tr_K7FRH6_K7FRH6_PELSI_13735 and tr_A0A226PEZ1_A0A226PEZ1_COLVI_9014 are exactly identical! WARNING: Sequences tr_G3T6C1_G3T6C1_LOXAF_9785 and tr_A0A2Y9QKW6_A0A2Y9QKW6_TRIMA_127582 are exactly identical! WARNING: Sequences tr_G3UE19_G3UE19_LOXAF_9785 and tr_G3W8V7_G3W8V7_SARHA_9305 are exactly identical! WARNING: Sequences tr_G3UE19_G3UE19_LOXAF_9785 and tr_A0A2Y9DVW2_A0A2Y9DVW2_TRIMA_127582 are exactly identical! WARNING: Sequences tr_G3UE81_G3UE81_LOXAF_9785 and tr_L5KUT2_L5KUT2_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G3W2Q6_G3W2Q6_SARHA_9305 and tr_G7PFE6_G7PFE6_MACFA_9541 are exactly identical! WARNING: Sequences sp_A4IIJ8_SOX10_XENTR_8364 and tr_H3A5R9_H3A5R9_LATCH_7897 are exactly identical! WARNING: Sequences sp_A4IIJ8_SOX10_XENTR_8364 and tr_A0A1L8GH44_A0A1L8GH44_XENLA_8355 are exactly identical! WARNING: Sequences sp_A4IIJ8_SOX10_XENTR_8364 and tr_A0A1L8GNW7_A0A1L8GNW7_XENLA_8355 are exactly identical! WARNING: Sequences tr_F7EAA5_F7EAA5_XENTR_8364 and tr_A0A1S2ZZ84_A0A1S2ZZ84_ERIEU_9365 are exactly identical! WARNING: Sequences tr_F7EAA5_F7EAA5_XENTR_8364 and tr_A0A1S3FPD6_A0A1S3FPD6_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q28GD5_SOX7_XENTR_8364 and tr_A0A1L8GC14_A0A1L8GC14_XENLA_8355 are exactly identical! WARNING: Sequences sp_Q66JF1_SOX11_XENTR_8364 and tr_A0A1L8G567_A0A1L8G567_XENLA_8355 are exactly identical! WARNING: Sequences sp_Q66JF1_SOX11_XENTR_8364 and tr_A0A1L8GBJ0_A0A1L8GBJ0_XENLA_8355 are exactly identical! WARNING: Sequences sp_Q6F2F0_S17B3_XENTR_8364 and sp_Q8AWH2_S17B1_XENTR_8364 are exactly identical! WARNING: Sequences tr_A0A287APF5_A0A287APF5_PIG_9823 and tr_A0A2U3YQW3_A0A2U3YQW3_LEPWE_9713 are exactly identical! WARNING: Sequences tr_E3LCV8_E3LCV8_CAERE_31234 and tr_A8XPM5_A8XPM5_CAEBR_6238 are exactly identical! WARNING: Sequences tr_E3LCV8_E3LCV8_CAERE_31234 and tr_A0A1I7TWE9_A0A1I7TWE9_9PELO_1561998 are exactly identical! WARNING: Sequences tr_E3LCV8_E3LCV8_CAERE_31234 and tr_A0A261CSU0_A0A261CSU0_9PELO_1503980 are exactly identical! WARNING: Sequences tr_E3LCV8_E3LCV8_CAERE_31234 and tr_A0A2G5SVY4_A0A2G5SVY4_9PELO_1611254 are exactly identical! WARNING: Sequences tr_B3RIY2_B3RIY2_TRIAD_10228 and tr_A0A369RX36_A0A369RX36_9METZ_287889 are exactly identical! WARNING: Sequences tr_B3RMX4_B3RMX4_TRIAD_10228 and tr_A0A369RRN9_A0A369RRN9_9METZ_287889 are exactly identical! WARNING: Sequences tr_L5KRB6_L5KRB6_PTEAL_9402 and tr_A0A151N801_A0A151N801_ALLMI_8496 are exactly identical! WARNING: Sequences tr_L5KRB6_L5KRB6_PTEAL_9402 and tr_A0A093HF61_A0A093HF61_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A337S669_A0A337S669_FELCA_9685 and tr_A0A2Y9IUY1_A0A2Y9IUY1_ENHLU_391180 are exactly identical! WARNING: Sequences tr_U3KIC5_U3KIC5_FICAL_59894 and tr_A0A218USA2_A0A218USA2_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A3B1JFM8_A0A3B1JFM8_ASTMX_7994 and tr_A0A1S3SBI0_A0A1S3SBI0_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A3B1JFM8_A0A3B1JFM8_ASTMX_7994 and tr_A0A060YSN3_A0A060YSN3_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A0P7V8G2_A0A0P7V8G2_9TELE_113540 and tr_A0A1S3PBK7_A0A1S3PBK7_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A0P7V8G2_A0A0P7V8G2_9TELE_113540 and tr_B5X176_B5X176_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A0K0FLP3_A0A0K0FLP3_STRVS_75913 and tr_A0A0K0EQI8_A0A0K0EQI8_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0FLP3_A0A0K0FLP3_STRVS_75913 and tr_A0A0N4ZYC1_A0A0N4ZYC1_PARTI_131310 are exactly identical! WARNING: Sequences tr_A0A0K0FLP3_A0A0K0FLP3_STRVS_75913 and tr_A0A0N5CDG2_A0A0N5CDG2_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A151MZZ1_A0A151MZZ1_ALLMI_8496 and tr_A0A1U7RKL1_A0A1U7RKL1_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0Q3XB15_A0A0Q3XB15_AMAAE_12930 and tr_A0A1V4JGP2_A0A1V4JGP2_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A091J8L7_A0A091J8L7_EGRGA_188379 and tr_A0A091WE73_A0A091WE73_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A194QUK0_A0A194QUK0_PAPMA_76193 and tr_A0A194PVG2_A0A194PVG2_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A0L7RD03_A0A0L7RD03_9HYME_597456 and tr_A0A0L7RD45_A0A0L7RD45_9HYME_597456 are exactly identical! WARNING: Sequences tr_A0A0L7RD03_A0A0L7RD03_9HYME_597456 and tr_A0A154P1I0_A0A154P1I0_9HYME_178035 are exactly identical! WARNING: Sequences tr_A0A1S3L5B2_A0A1S3L5B2_SALSA_8030 and tr_A0A1S3Q4H6_A0A1S3Q4H6_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3L5B2_A0A1S3L5B2_SALSA_8030 and tr_A0A2U9BNQ3_A0A2U9BNQ3_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A1S3M793_A0A1S3M793_SALSA_8030 and tr_A0A060YHL4_A0A060YHL4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3M793_A0A1S3M793_SALSA_8030 and tr_W5UF52_W5UF52_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A1S3NCY8_A0A1S3NCY8_SALSA_8030 and tr_A0A1S3QA46_A0A1S3QA46_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3NCY8_A0A1S3NCY8_SALSA_8030 and tr_A0A060VPX6_A0A060VPX6_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NCY8_A0A1S3NCY8_SALSA_8030 and tr_A0A060W3M5_A0A060W3M5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NEM9_A0A1S3NEM9_SALSA_8030 and tr_A0A060X6I0_A0A060X6I0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3RA21_A0A1S3RA21_SALSA_8030 and tr_A0A1S3S4E7_A0A1S3S4E7_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3RA21_A0A1S3RA21_SALSA_8030 and tr_A0A060X562_A0A060X562_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3RA21_A0A1S3RA21_SALSA_8030 and tr_A0A060X791_A0A060X791_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1L8H921_A0A1L8H921_XENLA_8355 and tr_A0A1L8HH81_A0A1L8HH81_XENLA_8355 are exactly identical! WARNING: Sequences tr_A0A1U7SLQ3_A0A1U7SLQ3_TARSY_1868482 and tr_A0A2R9A8D7_A0A2R9A8D7_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A226MLW0_A0A226MLW0_CALSU_9009 and tr_A0A226NYM5_A0A226NYM5_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226N304_A0A226N304_CALSU_9009 and tr_A0A226PFY6_A0A226PFY6_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2U4CMX9_A0A2U4CMX9_TURTR_9739 and tr_A0A2Y9QD54_A0A2Y9QD54_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4CMX9_A0A2U4CMX9_TURTR_9739 and tr_A0A2Y9T234_A0A2Y9T234_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 649 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/3_mltree/P48436.raxml.reduced.phy Alignment comprises 1 partitions and 78 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 78 / 78 Gaps: 1.54 % Invariant sites: 3.85 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/3_mltree/P48436.raxml.rba Parallelization scheme autoconfig: 2 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 996 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 78 / 6240 [00:00:00] Data distribution: max. searches per worker: 10 Starting ML tree search with 20 distinct starting trees [00:00:00 -68809.911228] Initial branch length optimization [00:00:02 -53956.268193] Model parameter optimization (eps = 10.000000) [00:00:22 -53757.939167] AUTODETECT spr round 1 (radius: 5) [00:01:58 -25944.144715] AUTODETECT spr round 2 (radius: 10) [00:03:29 -17962.971949] AUTODETECT spr round 3 (radius: 15) [00:05:11 -13923.468899] AUTODETECT spr round 4 (radius: 20) [00:07:01 -11373.649724] AUTODETECT spr round 5 (radius: 25) [00:08:59 -8869.806133] SPR radius for FAST iterations: 25 (autodetect) [00:08:59 -8869.806133] Model parameter optimization (eps = 3.000000) [00:09:14 -8851.893742] FAST spr round 1 (radius: 25) [00:10:48 -7026.398564] FAST spr round 2 (radius: 25) [00:12:12 -6722.095014] FAST spr round 3 (radius: 25) [00:13:35 -6696.278452] FAST spr round 4 (radius: 25) [00:14:56 -6696.240256] Model parameter optimization (eps = 1.000000) [00:15:09 -6694.949687] SLOW spr round 1 (radius: 5) [00:16:34 -6692.648848] SLOW spr round 2 (radius: 5) [00:17:58 -6691.422125] SLOW spr round 3 (radius: 5) [00:19:22 -6691.421733] SLOW spr round 4 (radius: 10) [00:20:51 -6639.906059] SLOW spr round 5 (radius: 5) [00:22:23 -6637.158646] SLOW spr round 6 (radius: 5) [00:23:50 -6637.087595] SLOW spr round 7 (radius: 10) [00:25:17 -6637.087494] SLOW spr round 8 (radius: 15) [00:27:03 -6632.066671] SLOW spr round 9 (radius: 5) [00:28:39 -6632.045333] SLOW spr round 10 (radius: 10) [00:30:07 -6632.045332] SLOW spr round 11 (radius: 15) [00:31:54 -6632.027944] SLOW spr round 12 (radius: 20) [00:34:08 -6623.497774] SLOW spr round 13 (radius: 5) [00:35:47 -6620.210530] SLOW spr round 14 (radius: 5) [00:37:16 -6619.471804] SLOW spr round 15 (radius: 5) [00:38:38 -6619.471799] SLOW spr round 16 (radius: 10) [00:40:04 -6618.191924] SLOW spr round 17 (radius: 5) [00:41:33 -6618.191918] SLOW spr round 18 (radius: 10) [00:43:00 -6618.028005] SLOW spr round 19 (radius: 5) [00:44:29 -6618.028004] SLOW spr round 20 (radius: 10) [00:45:55 -6618.028004] SLOW spr round 21 (radius: 15) [00:47:43 -6617.655253] SLOW spr round 22 (radius: 5) [00:49:18 -6617.655157] SLOW spr round 23 (radius: 10) [00:50:46 -6617.655156] SLOW spr round 24 (radius: 15) [00:52:33 -6617.655156] SLOW spr round 25 (radius: 20) [00:54:46 -6617.655156] SLOW spr round 26 (radius: 25) [00:57:35 -6617.655156] Model parameter optimization (eps = 0.100000) [00:57:49] [worker #0] ML tree search #1, logLikelihood: -6617.003130 [00:57:49 -69344.968242] Initial branch length optimization [00:57:50 -54696.663894] Model parameter optimization (eps = 10.000000) [00:58:09 -54487.530443] AUTODETECT spr round 1 (radius: 5) [00:59:44 -27006.207382] AUTODETECT spr round 2 (radius: 10) [01:01:15 -17578.196778] AUTODETECT spr round 3 (radius: 15) [01:02:55 -12703.585501] AUTODETECT spr round 4 (radius: 20) [01:04:44 -10772.229927] AUTODETECT spr round 5 (radius: 25) [01:06:36 -9332.443748] SPR radius for FAST iterations: 25 (autodetect) [01:06:36 -9332.443748] Model parameter optimization (eps = 3.000000) [01:06:52 -9319.899478] FAST spr round 1 (radius: 25) [01:08:25 -7618.676571] FAST spr round 2 (radius: 25) [01:09:49 -7398.064592] FAST spr round 3 (radius: 25) [01:11:11 -7325.889545] FAST spr round 4 (radius: 25) [01:12:34 -7285.511542] FAST spr round 5 (radius: 25) [01:13:56 -7245.960453] FAST spr round 6 (radius: 25) [01:15:18 -7220.202937] FAST spr round 7 (radius: 25) [01:16:42 -7203.067656] FAST spr round 8 (radius: 25) [01:18:03 -7203.054294] Model parameter optimization (eps = 1.000000) [01:18:16 -7199.473625] SLOW spr round 1 (radius: 5) [01:19:42 -7199.471786] SLOW spr round 2 (radius: 10) [01:21:13 -7192.596334] SLOW spr round 3 (radius: 5) [01:22:45 -7191.870143] SLOW spr round 4 (radius: 5) [01:24:10 -7191.870096] SLOW spr round 5 (radius: 10) [01:25:39 -7191.870033] SLOW spr round 6 (radius: 15) [01:27:29 -7118.333242] SLOW spr round 7 (radius: 5) [01:29:06 -7038.596598] SLOW spr round 8 (radius: 5) [01:29:58] [worker #1] ML tree search #2, logLikelihood: -6795.306350 [01:30:35 -7031.131678] SLOW spr round 9 (radius: 5) [01:31:59 -7031.131547] SLOW spr round 10 (radius: 10) [01:33:29 -7030.756675] SLOW spr round 11 (radius: 5) [01:34:58 -7030.756665] SLOW spr round 12 (radius: 10) [01:36:28 -7025.539121] SLOW spr round 13 (radius: 5) [01:37:57 -7020.086269] SLOW spr round 14 (radius: 5) [01:39:22 -7020.086263] SLOW spr round 15 (radius: 10) [01:40:51 -7020.086256] SLOW spr round 16 (radius: 15) [01:42:36 -7010.006167] SLOW spr round 17 (radius: 5) [01:44:13 -6988.704410] SLOW spr round 18 (radius: 5) [01:45:41 -6986.629850] SLOW spr round 19 (radius: 5) [01:47:06 -6986.628494] SLOW spr round 20 (radius: 10) [01:48:35 -6986.628223] SLOW spr round 21 (radius: 15) [01:50:21 -6984.996179] SLOW spr round 22 (radius: 5) [01:51:57 -6965.998356] SLOW spr round 23 (radius: 5) [01:53:22 -6965.998349] SLOW spr round 24 (radius: 10) [01:54:51 -6965.998346] SLOW spr round 25 (radius: 15) [01:56:34 -6963.341196] SLOW spr round 26 (radius: 5) [01:58:09 -6946.728893] SLOW spr round 27 (radius: 5) [01:59:35 -6946.728886] SLOW spr round 28 (radius: 10) [02:01:04 -6946.728882] SLOW spr round 29 (radius: 15) [02:02:49 -6946.728879] SLOW spr round 30 (radius: 20) [02:05:00 -6928.813161] SLOW spr round 31 (radius: 5) [02:06:38 -6922.384840] SLOW spr round 32 (radius: 5) [02:08:03 -6922.384837] SLOW spr round 33 (radius: 10) [02:09:32 -6922.384832] SLOW spr round 34 (radius: 15) [02:11:17 -6922.384829] SLOW spr round 35 (radius: 20) [02:13:26 -6920.055538] SLOW spr round 36 (radius: 5) [02:15:01 -6920.055533] SLOW spr round 37 (radius: 10) [02:16:32 -6919.079687] SLOW spr round 38 (radius: 5) [02:18:01 -6918.853581] SLOW spr round 39 (radius: 5) [02:19:23 -6918.853581] SLOW spr round 40 (radius: 10) [02:20:51 -6918.853578] SLOW spr round 41 (radius: 15) [02:22:36 -6918.853574] SLOW spr round 42 (radius: 20) [02:24:44 -6918.853571] SLOW spr round 43 (radius: 25) [02:27:27 -6915.460926] SLOW spr round 44 (radius: 5) [02:29:07 -6896.559478] SLOW spr round 45 (radius: 5) [02:30:34 -6895.328033] SLOW spr round 46 (radius: 5) [02:31:56 -6895.328029] SLOW spr round 47 (radius: 10) [02:33:23 -6895.328026] SLOW spr round 48 (radius: 15) [02:35:08 -6895.328023] SLOW spr round 49 (radius: 20) [02:37:15 -6895.328020] SLOW spr round 50 (radius: 25) [02:39:57 -6895.328017] Model parameter optimization (eps = 0.100000) [02:40:05] [worker #0] ML tree search #3, logLikelihood: -6895.134016 [02:40:05 -69178.600491] Initial branch length optimization [02:40:07 -54437.140957] Model parameter optimization (eps = 10.000000) [02:40:25 -54246.728329] AUTODETECT spr round 1 (radius: 5) [02:42:01 -27017.914742] AUTODETECT spr round 2 (radius: 10) [02:43:35 -17440.570505] AUTODETECT spr round 3 (radius: 15) [02:45:15 -13197.264353] AUTODETECT spr round 4 (radius: 20) [02:47:05 -11161.382409] AUTODETECT spr round 5 (radius: 25) [02:49:07 -9657.653806] SPR radius for FAST iterations: 25 (autodetect) [02:49:07 -9657.653806] Model parameter optimization (eps = 3.000000) [02:49:30 -9645.780683] FAST spr round 1 (radius: 25) [02:51:06 -7337.856370] FAST spr round 2 (radius: 25) [02:52:33 -7062.728608] FAST spr round 3 (radius: 25) [02:53:59 -7021.998184] FAST spr round 4 (radius: 25) [02:55:26 -6925.958932] FAST spr round 5 (radius: 25) [02:56:54 -6868.779168] FAST spr round 6 (radius: 25) [02:58:19 -6791.437578] FAST spr round 7 (radius: 25) [02:59:44 -6738.435615] FAST spr round 8 (radius: 25) [03:01:07 -6729.794997] FAST spr round 9 (radius: 25) [03:02:28 -6729.794957] Model parameter optimization (eps = 1.000000) [03:02:32] [worker #1] ML tree search #4, logLikelihood: -6840.201095 [03:02:36 -6729.278235] SLOW spr round 1 (radius: 5) [03:04:02 -6727.612536] SLOW spr round 2 (radius: 5) [03:05:26 -6727.612081] SLOW spr round 3 (radius: 10) [03:06:57 -6717.990744] SLOW spr round 4 (radius: 5) [03:08:29 -6710.755614] SLOW spr round 5 (radius: 5) [03:09:54 -6710.755157] SLOW spr round 6 (radius: 10) [03:11:23 -6709.650486] SLOW spr round 7 (radius: 5) [03:12:53 -6709.650129] SLOW spr round 8 (radius: 10) [03:14:21 -6709.650093] SLOW spr round 9 (radius: 15) [03:16:09 -6662.696298] SLOW spr round 10 (radius: 5) [03:17:47 -6662.122786] SLOW spr round 11 (radius: 5) [03:19:12 -6662.122674] SLOW spr round 12 (radius: 10) [03:20:41 -6659.405824] SLOW spr round 13 (radius: 5) [03:22:10 -6659.405823] SLOW spr round 14 (radius: 10) [03:23:41 -6634.474060] SLOW spr round 15 (radius: 5) [03:25:11 -6634.474005] SLOW spr round 16 (radius: 10) [03:26:40 -6634.474001] SLOW spr round 17 (radius: 15) [03:28:25 -6634.474001] SLOW spr round 18 (radius: 20) [03:30:38 -6616.483956] SLOW spr round 19 (radius: 5) [03:32:15 -6616.005677] SLOW spr round 20 (radius: 5) [03:33:41 -6616.005252] SLOW spr round 21 (radius: 10) [03:35:10 -6616.005235] SLOW spr round 22 (radius: 15) [03:36:56 -6616.005234] SLOW spr round 23 (radius: 20) [03:39:09 -6616.005234] SLOW spr round 24 (radius: 25) [03:41:55 -6611.754257] SLOW spr round 25 (radius: 5) [03:43:35 -6610.944641] SLOW spr round 26 (radius: 5) [03:45:02 -6610.942462] SLOW spr round 27 (radius: 10) [03:46:32 -6606.133419] SLOW spr round 28 (radius: 5) [03:48:02 -6606.133395] SLOW spr round 29 (radius: 10) [03:49:31 -6606.133375] SLOW spr round 30 (radius: 15) [03:51:17 -6606.133374] SLOW spr round 31 (radius: 20) [03:53:33 -6606.133374] SLOW spr round 32 (radius: 25) [03:56:06] [worker #1] ML tree search #6, logLikelihood: -6681.062679 [03:56:20 -6606.133362] Model parameter optimization (eps = 0.100000) [03:56:30] [worker #0] ML tree search #5, logLikelihood: -6605.880787 [03:56:30 -70702.189784] Initial branch length optimization [03:56:32 -55461.681176] Model parameter optimization (eps = 10.000000) [03:56:53 -55256.924051] AUTODETECT spr round 1 (radius: 5) [03:58:28 -27523.577396] AUTODETECT spr round 2 (radius: 10) [04:00:02 -17189.930185] AUTODETECT spr round 3 (radius: 15) [04:01:42 -13038.000849] AUTODETECT spr round 4 (radius: 20) [04:03:30 -10874.610060] AUTODETECT spr round 5 (radius: 25) [04:05:34 -9119.288023] SPR radius for FAST iterations: 25 (autodetect) [04:05:34 -9119.288023] Model parameter optimization (eps = 3.000000) [04:05:50 -9111.228987] FAST spr round 1 (radius: 25) [04:07:26 -7046.004570] FAST spr round 2 (radius: 25) [04:08:54 -6746.746863] FAST spr round 3 (radius: 25) [04:10:21 -6735.829253] FAST spr round 4 (radius: 25) [04:11:46 -6732.981832] FAST spr round 5 (radius: 25) [04:13:09 -6732.981724] Model parameter optimization (eps = 1.000000) [04:13:25 -6729.876835] SLOW spr round 1 (radius: 5) [04:14:53 -6728.948452] SLOW spr round 2 (radius: 5) [04:16:19 -6728.948113] SLOW spr round 3 (radius: 10) [04:17:51 -6722.399578] SLOW spr round 4 (radius: 5) [04:19:22 -6720.005645] SLOW spr round 5 (radius: 5) [04:20:47 -6720.005624] SLOW spr round 6 (radius: 10) [04:22:18 -6719.665511] SLOW spr round 7 (radius: 5) [04:23:49 -6719.459412] SLOW spr round 8 (radius: 5) [04:25:14 -6719.459025] SLOW spr round 9 (radius: 10) [04:26:43 -6719.459025] SLOW spr round 10 (radius: 15) [04:28:29 -6718.552610] SLOW spr round 11 (radius: 5) [04:30:06 -6718.347651] SLOW spr round 12 (radius: 5) [04:31:31 -6718.346868] SLOW spr round 13 (radius: 10) [04:33:00 -6718.346868] SLOW spr round 14 (radius: 15) [04:34:45 -6718.346866] SLOW spr round 15 (radius: 20) [04:36:52 -6716.340123] SLOW spr round 16 (radius: 5) [04:38:31 -6712.091984] SLOW spr round 17 (radius: 5) [04:40:00 -6711.981911] SLOW spr round 18 (radius: 5) [04:41:23 -6711.981843] SLOW spr round 19 (radius: 10) [04:42:52 -6711.981843] SLOW spr round 20 (radius: 15) [04:44:37 -6711.981843] SLOW spr round 21 (radius: 20) [04:46:46 -6710.388921] SLOW spr round 22 (radius: 5) [04:48:23 -6708.059096] SLOW spr round 23 (radius: 5) [04:49:50 -6708.058907] SLOW spr round 24 (radius: 10) [04:51:19 -6708.058871] SLOW spr round 25 (radius: 15) [04:53:04 -6708.058858] SLOW spr round 26 (radius: 20) [04:55:12 -6708.058853] SLOW spr round 27 (radius: 25) [04:57:38 -6707.881540] SLOW spr round 28 (radius: 5) [04:59:15 -6707.881475] SLOW spr round 29 (radius: 10) [05:00:48 -6707.881474] SLOW spr round 30 (radius: 15) [05:02:33 -6707.881474] SLOW spr round 31 (radius: 20) [05:04:42 -6707.804502] SLOW spr round 32 (radius: 25) [05:07:05 -6707.803948] Model parameter optimization (eps = 0.100000) [05:07:21] [worker #0] ML tree search #7, logLikelihood: -6707.432946 [05:07:21 -69403.492350] Initial branch length optimization [05:07:22 -54357.786097] Model parameter optimization (eps = 10.000000) [05:07:46 -54132.521729] AUTODETECT spr round 1 (radius: 5) [05:09:24 -27497.727398] AUTODETECT spr round 2 (radius: 10) [05:10:57 -19356.007004] AUTODETECT spr round 3 (radius: 15) [05:12:43 -13462.383712] AUTODETECT spr round 4 (radius: 20) [05:14:37 -10624.027436] AUTODETECT spr round 5 (radius: 25) [05:16:46 -9156.612411] SPR radius for FAST iterations: 25 (autodetect) [05:16:46 -9156.612411] Model parameter optimization (eps = 3.000000) [05:17:06 -9124.955142] FAST spr round 1 (radius: 25) [05:18:42 -7080.919552] FAST spr round 2 (radius: 25) [05:20:10 -6759.700500] FAST spr round 3 (radius: 25) [05:21:36 -6727.498018] FAST spr round 4 (radius: 25) [05:22:57 -6727.465617] Model parameter optimization (eps = 1.000000) [05:23:10 -6725.698801] SLOW spr round 1 (radius: 5) [05:24:36 -6724.537648] SLOW spr round 2 (radius: 5) [05:26:02 -6724.178265] SLOW spr round 3 (radius: 5) [05:27:26 -6724.177774] SLOW spr round 4 (radius: 10) [05:28:59 -6718.698087] SLOW spr round 5 (radius: 5) [05:30:30 -6718.660831] SLOW spr round 6 (radius: 10) [05:32:02 -6714.556373] SLOW spr round 7 (radius: 5) [05:33:33 -6714.556321] SLOW spr round 8 (radius: 10) [05:33:54] [worker #1] ML tree search #8, logLikelihood: -6718.542720 [05:35:03 -6713.646718] SLOW spr round 9 (radius: 5) [05:36:32 -6713.646717] SLOW spr round 10 (radius: 10) [05:38:02 -6713.646717] SLOW spr round 11 (radius: 15) [05:39:53 -6697.470509] SLOW spr round 12 (radius: 5) [05:41:29 -6697.468352] SLOW spr round 13 (radius: 10) [05:43:01 -6697.468099] SLOW spr round 14 (radius: 15) [05:44:52 -6697.390881] SLOW spr round 15 (radius: 20) [05:47:06 -6697.390879] SLOW spr round 16 (radius: 25) [05:49:48 -6635.965264] SLOW spr round 17 (radius: 5) [05:51:28 -6629.123858] SLOW spr round 18 (radius: 5) [05:52:58 -6629.095246] SLOW spr round 19 (radius: 10) [05:54:28 -6625.514628] SLOW spr round 20 (radius: 5) [05:56:00 -6623.478979] SLOW spr round 21 (radius: 5) [05:57:27 -6621.269633] SLOW spr round 22 (radius: 5) [05:58:51 -6621.266996] SLOW spr round 23 (radius: 10) [06:00:20 -6621.266350] SLOW spr round 24 (radius: 15) [06:02:11 -6621.266188] SLOW spr round 25 (radius: 20) [06:04:25 -6621.266144] SLOW spr round 26 (radius: 25) [06:07:13 -6619.663192] SLOW spr round 27 (radius: 5) [06:08:53 -6619.638247] SLOW spr round 28 (radius: 10) [06:10:28 -6619.638079] SLOW spr round 29 (radius: 15) [06:12:15 -6619.638001] SLOW spr round 30 (radius: 20) [06:14:23 -6619.637963] SLOW spr round 31 (radius: 25) [06:16:53 -6619.637945] Model parameter optimization (eps = 0.100000) [06:17:02] [worker #0] ML tree search #9, logLikelihood: -6619.456914 [06:17:03 -69490.251401] Initial branch length optimization [06:17:04 -54612.722734] Model parameter optimization (eps = 10.000000) [06:17:22 -54398.020100] AUTODETECT spr round 1 (radius: 5) [06:18:57 -27221.361549] AUTODETECT spr round 2 (radius: 10) [06:20:29 -17448.419403] AUTODETECT spr round 3 (radius: 15) [06:22:08 -12799.367290] AUTODETECT spr round 4 (radius: 20) [06:23:57 -10307.749101] AUTODETECT spr round 5 (radius: 25) [06:26:01 -9008.763272] SPR radius for FAST iterations: 25 (autodetect) [06:26:01 -9008.763272] Model parameter optimization (eps = 3.000000) [06:26:20 -8980.926286] FAST spr round 1 (radius: 25) [06:27:55 -7356.247194] FAST spr round 2 (radius: 25) [06:29:23 -7246.902725] FAST spr round 3 (radius: 25) [06:30:50 -7220.724625] FAST spr round 4 (radius: 25) [06:32:13 -7218.091536] FAST spr round 5 (radius: 25) [06:33:36 -7218.091483] Model parameter optimization (eps = 1.000000) [06:33:46 -7217.359706] SLOW spr round 1 (radius: 5) [06:35:13 -7216.017082] SLOW spr round 2 (radius: 5) [06:36:39 -7216.016246] SLOW spr round 3 (radius: 10) [06:38:11 -7215.145386] SLOW spr round 4 (radius: 5) [06:39:41] [worker #1] ML tree search #10, logLikelihood: -6860.400983 [06:39:45 -7214.777441] SLOW spr round 5 (radius: 5) [06:41:13 -7214.777346] SLOW spr round 6 (radius: 10) [06:42:45 -7214.777285] SLOW spr round 7 (radius: 15) [06:44:37 -7123.887758] SLOW spr round 8 (radius: 5) [06:46:14 -6990.966579] SLOW spr round 9 (radius: 5) [06:47:43 -6958.858504] SLOW spr round 10 (radius: 5) [06:49:10 -6958.856300] SLOW spr round 11 (radius: 10) [06:50:44 -6894.344562] SLOW spr round 12 (radius: 5) [06:52:17 -6891.110470] SLOW spr round 13 (radius: 5) [06:53:45 -6891.110443] SLOW spr round 14 (radius: 10) [06:55:18 -6891.110388] SLOW spr round 15 (radius: 15) [06:57:05 -6888.531781] SLOW spr round 16 (radius: 5) [06:58:42 -6887.952905] SLOW spr round 17 (radius: 5) [07:00:10 -6887.952890] SLOW spr round 18 (radius: 10) [07:01:40 -6887.477026] SLOW spr round 19 (radius: 5) [07:03:10 -6887.476465] SLOW spr round 20 (radius: 10) [07:04:41 -6887.476148] SLOW spr round 21 (radius: 15) [07:06:24 -6887.475945] SLOW spr round 22 (radius: 20) [07:08:28 -6887.475799] SLOW spr round 23 (radius: 25) [07:10:58 -6805.873789] SLOW spr round 24 (radius: 5) [07:12:40 -6799.462512] SLOW spr round 25 (radius: 5) [07:14:08 -6799.460105] SLOW spr round 26 (radius: 10) [07:15:38 -6799.458718] SLOW spr round 27 (radius: 15) [07:17:23 -6797.629583] SLOW spr round 28 (radius: 5) [07:18:59 -6797.628661] SLOW spr round 29 (radius: 10) [07:20:31 -6797.628284] SLOW spr round 30 (radius: 15) [07:22:12 -6797.628092] SLOW spr round 31 (radius: 20) [07:24:15 -6793.693334] SLOW spr round 32 (radius: 5) [07:25:55 -6793.207850] SLOW spr round 33 (radius: 5) [07:27:25 -6793.203960] SLOW spr round 34 (radius: 10) [07:28:55 -6793.203886] SLOW spr round 35 (radius: 15) [07:30:38 -6793.203871] SLOW spr round 36 (radius: 20) [07:32:38 -6793.203865] SLOW spr round 37 (radius: 25) [07:35:12 -6793.203864] Model parameter optimization (eps = 0.100000) [07:35:26] [worker #0] ML tree search #11, logLikelihood: -6792.849042 [07:35:26 -69362.357708] Initial branch length optimization [07:35:28 -54241.985001] Model parameter optimization (eps = 10.000000) [07:35:49 -54043.279111] AUTODETECT spr round 1 (radius: 5) [07:37:29 -26801.213214] AUTODETECT spr round 2 (radius: 10) [07:39:04 -17328.682396] AUTODETECT spr round 3 (radius: 15) [07:40:45 -14122.695019] AUTODETECT spr round 4 (radius: 20) [07:42:41 -11768.382706] AUTODETECT spr round 5 (radius: 25) [07:44:49 -10218.889927] SPR radius for FAST iterations: 25 (autodetect) [07:44:49 -10218.889927] Model parameter optimization (eps = 3.000000) [07:45:05 -10211.037338] FAST spr round 1 (radius: 25) [07:46:46 -7477.893854] FAST spr round 2 (radius: 25) [07:48:16 -7150.816096] FAST spr round 3 (radius: 25) [07:49:43 -7048.600578] FAST spr round 4 (radius: 25) [07:51:07 -7043.080283] FAST spr round 5 (radius: 25) [07:52:31 -7024.080011] FAST spr round 6 (radius: 25) [07:53:56 -6997.347554] FAST spr round 7 (radius: 25) [07:55:20 -6994.928613] FAST spr round 8 (radius: 25) [07:56:43 -6994.928609] Model parameter optimization (eps = 1.000000) [07:56:59 -6988.430017] SLOW spr round 1 (radius: 5) [07:58:28 -6987.568245] SLOW spr round 2 (radius: 5) [07:59:54 -6986.702988] SLOW spr round 3 (radius: 5) [08:01:19 -6986.702979] SLOW spr round 4 (radius: 10) [08:02:52 -6986.135024] SLOW spr round 5 (radius: 5) [08:04:25 -6984.240564] SLOW spr round 6 (radius: 5) [08:05:50 -6984.240497] SLOW spr round 7 (radius: 10) [08:07:21 -6983.535396] SLOW spr round 8 (radius: 5) [08:08:55 -6979.829719] SLOW spr round 9 (radius: 5) [08:10:22 -6979.829557] SLOW spr round 10 (radius: 10) [08:11:52 -6979.829550] SLOW spr round 11 (radius: 15) [08:13:40 -6977.821916] SLOW spr round 12 (radius: 5) [08:15:20 -6975.387975] SLOW spr round 13 (radius: 5) [08:16:48 -6975.386618] SLOW spr round 14 (radius: 10) [08:17:54] [worker #1] ML tree search #12, logLikelihood: -6953.093219 [08:18:18 -6975.386600] SLOW spr round 15 (radius: 15) [08:20:07 -6975.386598] SLOW spr round 16 (radius: 20) [08:22:16 -6973.428625] SLOW spr round 17 (radius: 5) [08:23:53 -6973.428556] SLOW spr round 18 (radius: 10) [08:25:26 -6973.428556] SLOW spr round 19 (radius: 15) [08:27:12 -6973.428540] SLOW spr round 20 (radius: 20) [08:29:19 -6973.428540] SLOW spr round 21 (radius: 25) [08:31:57 -6973.164944] SLOW spr round 22 (radius: 5) [08:33:34 -6973.164572] SLOW spr round 23 (radius: 10) [08:35:08 -6972.998388] SLOW spr round 24 (radius: 5) [08:36:38 -6972.998348] SLOW spr round 25 (radius: 10) [08:38:08 -6972.998348] SLOW spr round 26 (radius: 15) [08:39:54 -6972.998348] SLOW spr round 27 (radius: 20) [08:42:01 -6972.598015] SLOW spr round 28 (radius: 5) [08:43:40 -6972.247292] SLOW spr round 29 (radius: 5) [08:45:08 -6972.247113] SLOW spr round 30 (radius: 10) [08:46:37 -6972.247102] SLOW spr round 31 (radius: 15) [08:48:23 -6968.429548] SLOW spr round 32 (radius: 5) [08:49:58 -6968.429517] SLOW spr round 33 (radius: 10) [08:51:29 -6965.096600] SLOW spr round 34 (radius: 5) [08:52:58 -6965.096599] SLOW spr round 35 (radius: 10) [08:54:27 -6965.096599] SLOW spr round 36 (radius: 15) [08:56:12 -6965.096599] SLOW spr round 37 (radius: 20) [08:58:18 -6965.096599] SLOW spr round 38 (radius: 25) [09:00:54 -6965.096599] Model parameter optimization (eps = 0.100000) [09:01:04] [worker #0] ML tree search #13, logLikelihood: -6964.826706 [09:01:04 -69766.152563] Initial branch length optimization [09:01:05 -54635.817730] Model parameter optimization (eps = 10.000000) [09:01:25 -54430.966717] AUTODETECT spr round 1 (radius: 5) [09:03:00 -28376.015585] AUTODETECT spr round 2 (radius: 10) [09:04:33 -18097.821578] AUTODETECT spr round 3 (radius: 15) [09:06:15 -13365.650791] AUTODETECT spr round 4 (radius: 20) [09:08:05 -10408.857419] AUTODETECT spr round 5 (radius: 25) [09:09:58 -8910.376134] SPR radius for FAST iterations: 25 (autodetect) [09:09:58 -8910.376134] Model parameter optimization (eps = 3.000000) [09:10:13 -8907.108114] FAST spr round 1 (radius: 25) [09:11:49 -7159.545788] FAST spr round 2 (radius: 25) [09:13:18 -6970.796131] FAST spr round 3 (radius: 25) [09:14:45 -6966.131570] FAST spr round 4 (radius: 25) [09:16:09 -6965.060200] FAST spr round 5 (radius: 25) [09:17:32 -6965.059189] Model parameter optimization (eps = 1.000000) [09:17:47 -6963.045316] SLOW spr round 1 (radius: 5) [09:19:17 -6961.183304] SLOW spr round 2 (radius: 5) [09:20:46 -6958.680078] SLOW spr round 3 (radius: 5) [09:22:12 -6958.680004] SLOW spr round 4 (radius: 10) [09:23:45 -6875.079955] SLOW spr round 5 (radius: 5) [09:25:17 -6875.079899] SLOW spr round 6 (radius: 10) [09:26:47 -6875.079895] SLOW spr round 7 (radius: 15) [09:28:40 -6831.061241] SLOW spr round 8 (radius: 5) [09:30:19 -6805.194535] SLOW spr round 9 (radius: 5) [09:31:49 -6800.665117] SLOW spr round 10 (radius: 5) [09:33:15 -6800.665071] SLOW spr round 11 (radius: 10) [09:34:49 -6784.806682] SLOW spr round 12 (radius: 5) [09:36:23 -6779.810041] SLOW spr round 13 (radius: 5) [09:37:50 -6779.810020] SLOW spr round 14 (radius: 10) [09:39:22 -6762.756869] SLOW spr round 15 (radius: 5) [09:40:55 -6755.128564] SLOW spr round 16 (radius: 5) [09:42:21 -6755.128548] SLOW spr round 17 (radius: 10) [09:43:52 -6750.662254] SLOW spr round 18 (radius: 5) [09:45:23 -6750.662253] SLOW spr round 19 (radius: 10) [09:46:55 -6749.722990] SLOW spr round 20 (radius: 5) [09:48:26 -6749.722939] SLOW spr round 21 (radius: 10) [09:49:56 -6749.722924] SLOW spr round 22 (radius: 15) [09:51:41 -6748.438196] SLOW spr round 23 (radius: 5) [09:53:18 -6748.437746] SLOW spr round 24 (radius: 10) [09:54:52 -6745.994298] SLOW spr round 25 (radius: 5) [09:56:25 -6745.993088] SLOW spr round 26 (radius: 10) [09:57:56 -6745.993056] SLOW spr round 27 (radius: 15) [09:59:44 -6744.493934] SLOW spr round 28 (radius: 5) [10:01:23 -6743.498546] SLOW spr round 29 (radius: 5) [10:02:54 -6743.498168] SLOW spr round 30 (radius: 10) [10:04:27 -6743.498161] SLOW spr round 31 (radius: 15) [10:06:13 -6743.105693] SLOW spr round 32 (radius: 5) [10:07:52 -6743.088511] SLOW spr round 33 (radius: 10) [10:09:25 -6743.086129] SLOW spr round 34 (radius: 15) [10:11:10 -6743.085613] SLOW spr round 35 (radius: 20) [10:13:09 -6728.653001] SLOW spr round 36 (radius: 5) [10:14:48 -6728.616896] SLOW spr round 37 (radius: 10) [10:16:23 -6727.803595] SLOW spr round 38 (radius: 5) [10:17:56 -6727.803549] SLOW spr round 39 (radius: 10) [10:19:27 -6727.803547] SLOW spr round 40 (radius: 15) [10:21:13 -6727.803547] SLOW spr round 41 (radius: 20) [10:23:14 -6727.803547] SLOW spr round 42 (radius: 25) [10:25:28 -6712.002294] SLOW spr round 43 (radius: 5) [10:27:10 -6708.627808] SLOW spr round 44 (radius: 5) [10:28:41 -6708.627775] SLOW spr round 45 (radius: 10) [10:30:13 -6708.627775] SLOW spr round 46 (radius: 15) [10:32:00 -6705.518661] SLOW spr round 47 (radius: 5) [10:33:37 -6705.516691] SLOW spr round 48 (radius: 10) [10:35:09 -6705.516108] SLOW spr round 49 (radius: 15) [10:36:53 -6705.515903] SLOW spr round 50 (radius: 20) [10:38:53 -6705.515831] SLOW spr round 51 (radius: 25) [10:41:08 -6702.579411] SLOW spr round 52 (radius: 5) [10:42:46 -6702.577155] SLOW spr round 53 (radius: 10) [10:44:19 -6702.576897] SLOW spr round 54 (radius: 15) [10:46:02 -6702.576864] SLOW spr round 55 (radius: 20) [10:46:55] [worker #1] ML tree search #14, logLikelihood: -6652.167294 [10:48:03 -6702.576860] SLOW spr round 56 (radius: 25) [10:50:21 -6702.576859] Model parameter optimization (eps = 0.100000) [10:50:36] [worker #0] ML tree search #15, logLikelihood: -6702.336228 [10:50:36 -69570.642458] Initial branch length optimization [10:50:38 -54617.266381] Model parameter optimization (eps = 10.000000) [10:50:56 -54405.604728] AUTODETECT spr round 1 (radius: 5) [10:52:32 -26742.569636] AUTODETECT spr round 2 (radius: 10) [10:54:05 -17391.117359] AUTODETECT spr round 3 (radius: 15) [10:55:48 -12994.715272] AUTODETECT spr round 4 (radius: 20) [10:57:42 -10896.437388] AUTODETECT spr round 5 (radius: 25) [10:59:47 -9016.753645] SPR radius for FAST iterations: 25 (autodetect) [10:59:47 -9016.753645] Model parameter optimization (eps = 3.000000) [11:00:02 -9008.024437] FAST spr round 1 (radius: 25) [11:01:39 -7204.599917] FAST spr round 2 (radius: 25) [11:03:10 -7046.706514] FAST spr round 3 (radius: 25) [11:04:38 -7017.472590] FAST spr round 4 (radius: 25) [11:06:05 -6878.843266] FAST spr round 5 (radius: 25) [11:07:30 -6878.842286] Model parameter optimization (eps = 1.000000) [11:07:46 -6867.090223] SLOW spr round 1 (radius: 5) [11:09:14 -6863.634405] SLOW spr round 2 (radius: 5) [11:10:39 -6861.287440] SLOW spr round 3 (radius: 5) [11:12:03 -6861.287436] SLOW spr round 4 (radius: 10) [11:13:35 -6782.383690] SLOW spr round 5 (radius: 5) [11:15:09 -6768.793090] SLOW spr round 6 (radius: 5) [11:16:35 -6768.792602] SLOW spr round 7 (radius: 10) [11:18:05 -6768.792595] SLOW spr round 8 (radius: 15) [11:19:52 -6762.879686] SLOW spr round 9 (radius: 5) [11:21:27 -6762.879580] SLOW spr round 10 (radius: 10) [11:22:58 -6759.622060] SLOW spr round 11 (radius: 5) [11:24:27 -6759.621515] SLOW spr round 12 (radius: 10) [11:25:57 -6759.621482] SLOW spr round 13 (radius: 15) [11:27:43 -6757.691968] SLOW spr round 14 (radius: 5) [11:29:19 -6757.107897] SLOW spr round 15 (radius: 5) [11:30:46 -6757.106675] SLOW spr round 16 (radius: 10) [11:32:16 -6757.106614] SLOW spr round 17 (radius: 15) [11:34:03 -6756.763666] SLOW spr round 18 (radius: 5) [11:35:39 -6756.763278] SLOW spr round 19 (radius: 10) [11:37:09 -6756.763274] SLOW spr round 20 (radius: 15) [11:38:55 -6756.763273] SLOW spr round 21 (radius: 20) [11:41:06 -6756.763207] SLOW spr round 22 (radius: 25) [11:43:50 -6756.763207] Model parameter optimization (eps = 0.100000) [11:43:56] [worker #0] ML tree search #17, logLikelihood: -6756.687038 [11:43:56 -69386.053524] Initial branch length optimization [11:43:58 -54383.222200] Model parameter optimization (eps = 10.000000) [11:44:21 -54177.683992] AUTODETECT spr round 1 (radius: 5) [11:45:58 -26494.887140] AUTODETECT spr round 2 (radius: 10) [11:47:30 -16783.547013] AUTODETECT spr round 3 (radius: 15) [11:49:11 -12381.706952] AUTODETECT spr round 4 (radius: 20) [11:51:01 -10775.417979] AUTODETECT spr round 5 (radius: 25) [11:53:02 -9010.321588] SPR radius for FAST iterations: 25 (autodetect) [11:53:02 -9010.321588] Model parameter optimization (eps = 3.000000) [11:53:10 -9007.923554] FAST spr round 1 (radius: 25) [11:54:46 -7404.854474] FAST spr round 2 (radius: 25) [11:56:14 -7211.379867] FAST spr round 3 (radius: 25) [11:57:41 -7153.808169] FAST spr round 4 (radius: 25) [11:59:08 -7128.544058] FAST spr round 5 (radius: 25) [12:00:31 -7125.810984] FAST spr round 6 (radius: 25) [12:01:54 -7125.810779] Model parameter optimization (eps = 1.000000) [12:02:13 -7124.398735] SLOW spr round 1 (radius: 5) [12:03:03] [worker #1] ML tree search #16, logLikelihood: -6691.402764 [12:03:40 -7124.323211] SLOW spr round 2 (radius: 10) [12:05:13 -7040.179988] SLOW spr round 3 (radius: 5) [12:06:47 -7028.819948] SLOW spr round 4 (radius: 5) [12:08:15 -7022.582488] SLOW spr round 5 (radius: 5) [12:09:41 -7022.581826] SLOW spr round 6 (radius: 10) [12:11:10 -7022.581758] SLOW spr round 7 (radius: 15) [12:13:02 -6924.669821] SLOW spr round 8 (radius: 5) [12:14:41 -6923.667471] SLOW spr round 9 (radius: 5) [12:16:12 -6921.565200] SLOW spr round 10 (radius: 5) [12:17:38 -6920.042332] SLOW spr round 11 (radius: 5) [12:19:04 -6919.363696] SLOW spr round 12 (radius: 5) [12:20:28 -6919.363133] SLOW spr round 13 (radius: 10) [12:21:57 -6917.622503] SLOW spr round 14 (radius: 5) [12:23:30 -6916.867369] SLOW spr round 15 (radius: 5) [12:24:57 -6915.832920] SLOW spr round 16 (radius: 5) [12:26:19 -6915.832919] SLOW spr round 17 (radius: 10) [12:27:48 -6915.832919] SLOW spr round 18 (radius: 15) [12:29:43 -6913.659497] SLOW spr round 19 (radius: 5) [12:31:21 -6913.351616] SLOW spr round 20 (radius: 5) [12:32:50 -6913.351140] SLOW spr round 21 (radius: 10) [12:34:20 -6913.351115] SLOW spr round 22 (radius: 15) [12:36:14 -6913.351109] SLOW spr round 23 (radius: 20) [12:38:43 -6884.142898] SLOW spr round 24 (radius: 5) [12:40:23 -6836.975874] SLOW spr round 25 (radius: 5) [12:41:54 -6834.582439] SLOW spr round 26 (radius: 5) [12:43:18 -6834.582151] SLOW spr round 27 (radius: 10) [12:44:47 -6834.120956] SLOW spr round 28 (radius: 5) [12:46:19 -6833.998389] SLOW spr round 29 (radius: 5) [12:47:43 -6833.997950] SLOW spr round 30 (radius: 10) [12:49:11 -6833.997505] SLOW spr round 31 (radius: 15) [12:51:05 -6830.362527] SLOW spr round 32 (radius: 5) [12:52:43 -6828.497732] SLOW spr round 33 (radius: 5) [12:54:09 -6828.497726] SLOW spr round 34 (radius: 10) [12:55:39 -6828.497721] SLOW spr round 35 (radius: 15) [12:57:33 -6828.497721] SLOW spr round 36 (radius: 20) [13:00:01 -6828.497680] SLOW spr round 37 (radius: 25) [13:02:59 -6827.710045] SLOW spr round 38 (radius: 5) [13:04:40 -6824.590697] SLOW spr round 39 (radius: 5) [13:06:07 -6824.589659] SLOW spr round 40 (radius: 10) [13:07:37 -6824.589659] SLOW spr round 41 (radius: 15) [13:09:30 -6824.589659] SLOW spr round 42 (radius: 20) [13:12:00 -6768.154856] SLOW spr round 43 (radius: 5) [13:13:40 -6675.427620] SLOW spr round 44 (radius: 5) [13:15:06 -6675.426380] SLOW spr round 45 (radius: 10) [13:16:36 -6675.095734] SLOW spr round 46 (radius: 5) [13:18:08 -6673.679258] SLOW spr round 47 (radius: 5) [13:19:31 -6673.679043] SLOW spr round 48 (radius: 10) [13:21:00 -6673.679042] SLOW spr round 49 (radius: 15) [13:22:52 -6673.679042] SLOW spr round 50 (radius: 20) [13:24:34] [worker #1] ML tree search #18, logLikelihood: -6860.119372 [13:25:19 -6673.679042] SLOW spr round 51 (radius: 25) [13:28:15 -6673.679042] Model parameter optimization (eps = 0.100000) [13:28:28] [worker #0] ML tree search #19, logLikelihood: -6667.026009 [14:41:20] [worker #1] ML tree search #20, logLikelihood: -6645.075378 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.354432,0.297199) (0.288699,0.530010) (0.305948,1.472823) (0.050921,5.715544) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -6605.880787 AIC score: 17201.761573 / AICc score: 7981241.761573 / BIC score: 21903.395683 Free parameters (model + branch lengths): 1995 WARNING: Number of free parameters (K=1995) is larger than alignment size (n=78). This might lead to overfitting and compromise tree inference results! Best ML tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/3_mltree/P48436.raxml.bestTree All ML trees saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/3_mltree/P48436.raxml.mlTrees Optimized model saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/3_mltree/P48436.raxml.bestModel Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_040621/phylogeny-snakemake/results/P48436/3_mltree/P48436.raxml.log Analysis started: 18-Jun-2021 00:38:30 / finished: 18-Jun-2021 15:19:51 Elapsed time: 52881.018 seconds