RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 13:36:26 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/2_msa/P36894_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/3_mltree/P36894.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/4_raxmlng_ancestral/P36894 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622802986 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/2_msa/P36894_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 532 sites WARNING: Sequences tr_M3XN09_M3XN09_MUSPF_9669 and tr_A0A2U3VJ27_A0A2U3VJ27_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3XN09_M3XN09_MUSPF_9669 and tr_A0A2Y9KR32_A0A2Y9KR32_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YBS0_M3YBS0_MUSPF_9669 and tr_E2QW66_E2QW66_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3YBS0_M3YBS0_MUSPF_9669 and tr_G1LTU6_G1LTU6_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YBS0_M3YBS0_MUSPF_9669 and tr_A0A2U3WMM9_A0A2U3WMM9_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YBS0_M3YBS0_MUSPF_9669 and tr_A0A384CHL7_A0A384CHL7_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and tr_A0A2J8SUK4_A0A2J8SUK4_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and sp_Q04771_ACVR1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and tr_F7A9J8_F7A9J8_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and tr_G7PKM2_G7PKM2_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and tr_A0A0D9RTR7_A0A0D9RTR7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and tr_A0A2K5NWQ4_A0A2K5NWQ4_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and tr_A0A2K6CVH7_A0A2K6CVH7_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1QJA7_G1QJA7_NOMLE_61853 and tr_A0A2K5ZEV2_A0A2K5ZEV2_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I2Y6J8_A0A2I2Y6J8_GORGO_9595 and tr_A0A2R9BFF9_A0A2R9BFF9_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I2YVY6_A0A2I2YVY6_GORGO_9595 and tr_A0A0D9RTS1_A0A0D9RTS1_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I2ZVD2_A0A2I2ZVD2_GORGO_9595 and tr_A0A2I3S7X1_A0A2I3S7X1_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2ZVD2_A0A2I2ZVD2_GORGO_9595 and tr_A0A2R9AE23_A0A2R9AE23_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QMC3_G3QMC3_GORGO_9595 and tr_A0A2J8XW64_A0A2J8XW64_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3QMC3_G3QMC3_GORGO_9595 and tr_A0A2R9BVX7_A0A2R9BVX7_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2J8SXN2_A0A2J8SXN2_PONAB_9601 and tr_A0A0D9R0J5_A0A0D9R0J5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_Q29M17_Q29M17_DROPS_46245 and tr_B4G6Q1_B4G6Q1_DROPE_7234 are exactly identical! WARNING: Sequences tr_H2Q5Y5_H2Q5Y5_PANTR_9598 and sp_P37023_ACVL1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2Q5Y5_H2Q5Y5_PANTR_9598 and tr_A0A2R9BCM1_A0A2R9BCM1_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QIU8_H2QIU8_PANTR_9598 and tr_A0A2R9BBB6_A0A2R9BBB6_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A087ZS89_A0A087ZS89_APIME_7460 and tr_A0A2A3E0I9_A0A2A3E0I9_APICC_94128 are exactly identical! WARNING: Sequences sp_P36897_TGFR1_HUMAN_9606 and tr_A0A2I3NGA1_A0A2I3NGA1_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P36897_TGFR1_HUMAN_9606 and tr_A0A2K6BUU5_A0A2K6BUU5_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7H4T8_F7H4T8_MACMU_9544 and tr_A0A2K5M2A7_A0A2K5M2A7_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7H4T8_F7H4T8_MACMU_9544 and tr_A0A2K6C2T9_A0A2K6C2T9_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7HG73_F7HG73_MACMU_9544 and tr_G7PIB8_G7PIB8_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7HG73_F7HG73_MACMU_9544 and tr_A0A2K5ZZK2_A0A2K5ZZK2_MANLE_9568 are exactly identical! WARNING: Sequences tr_E5S419_E5S419_TRISP_6334 and tr_A0A0V0S0N7_A0A0V0S0N7_9BILA_6336 are exactly identical! WARNING: Sequences tr_Q7PDC5_Q7PDC5_ANOGA_7165 and tr_Q7Q466_Q7Q466_ANOGA_7165 are exactly identical! WARNING: Sequences tr_G3UDV2_G3UDV2_LOXAF_9785 and tr_D3K5N5_D3K5N5_PIG_9823 are exactly identical! WARNING: Sequences tr_G3UDV2_G3UDV2_LOXAF_9785 and tr_F1MSQ2_F1MSQ2_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A287BHU6_A0A287BHU6_PIG_9823 and tr_G1M6Y2_G1M6Y2_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A287BHU6_A0A287BHU6_PIG_9823 and tr_A0A2I2U1C7_A0A2I2U1C7_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A287BHU6_A0A287BHU6_PIG_9823 and tr_A0A384BST5_A0A384BST5_URSMA_29073 are exactly identical! WARNING: Sequences tr_U3JBE7_U3JBE7_FICAL_59894 and tr_A0A218U9E3_A0A218U9E3_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A096MTD0_A0A096MTD0_PAPAN_9555 and tr_A0A2K6AS21_A0A2K6AS21_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096MTD0_A0A096MTD0_PAPAN_9555 and tr_A0A2K5YZ50_A0A2K5YZ50_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A096NRY2_A0A096NRY2_PAPAN_9555 and tr_A0A2K5MZP9_A0A2K5MZP9_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A151MRQ1_A0A151MRQ1_ALLMI_8496 and tr_A0A1U7SFB6_A0A1U7SFB6_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091ED58_A0A091ED58_CORBR_85066 and tr_A0A087QSP6_A0A087QSP6_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091ED58_A0A091ED58_CORBR_85066 and tr_A0A091WNP7_A0A091WNP7_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091ED58_A0A091ED58_CORBR_85066 and tr_A0A0A0AEB0_A0A0A0AEB0_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091JLL3_A0A091JLL3_EGRGA_188379 and tr_A0A091W1H9_A0A091W1H9_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091JLL3_A0A091JLL3_EGRGA_188379 and tr_A0A093H3F6_A0A093H3F6_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A091JLL3_A0A091JLL3_EGRGA_188379 and tr_A0A091WAW3_A0A091WAW3_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A091JLL3_A0A091JLL3_EGRGA_188379 and tr_A0A099ZVM4_A0A099ZVM4_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A0V0RVN2_A0A0V0RVN2_9BILA_6336 and tr_A0A0V0ZBV9_A0A0V0ZBV9_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V1CME1_A0A0V1CME1_TRIBR_45882 and tr_A0A0V0VC13_A0A0V0VC13_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1CME1_A0A0V1CME1_TRIBR_45882 and tr_A0A0V1PC28_A0A0V1PC28_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1CME1_A0A0V1CME1_TRIBR_45882 and tr_A0A0V0TV85_A0A0V0TV85_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V1CP12_A0A0V1CP12_TRIBR_45882 and tr_A0A0V0W009_A0A0V0W009_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1CP12_A0A0V1CP12_TRIBR_45882 and tr_A0A0V1P2F7_A0A0V1P2F7_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1CP12_A0A0V1CP12_TRIBR_45882 and tr_A0A0V0UAC6_A0A0V0UAC6_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0WRA6_A0A0V0WRA6_9BILA_92179 and tr_A0A0V0UZF4_A0A0V0UZF4_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0WRA6_A0A0V0WRA6_9BILA_92179 and tr_A0A0V1L356_A0A0V1L356_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0WRA6_A0A0V0WRA6_9BILA_92179 and tr_A0A0V1NRZ1_A0A0V1NRZ1_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0WRA6_A0A0V0WRA6_9BILA_92179 and tr_A0A0V0UD44_A0A0V0UD44_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0X3A5_A0A0V0X3A5_9BILA_92179 and tr_A0A0V1LMM5_A0A0V1LMM5_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A1S3LKB8_A0A1S3LKB8_SALSA_8030 and tr_C0HBI7_C0HBI7_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A2K5N641_A0A2K5N641_CERAT_9531 and tr_A0A2K6D1Y7_A0A2K6D1Y7_MACNE_9545 are exactly identical! WARNING: Duplicate sequences found: 65 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/4_raxmlng_ancestral/P36894.raxml.reduced.phy Alignment comprises 1 partitions and 532 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 532 Gaps: 15.79 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/4_raxmlng_ancestral/P36894.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/3_mltree/P36894.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 133 / 10640 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -151136.309328 [00:00:00 -151136.309328] Initial branch length optimization [00:00:00 -150803.686818] Model parameter optimization (eps = 0.100000) [00:00:33] Tree #1, final logLikelihood: -150556.623859 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.258623,0.182833) (0.207467,0.348741) (0.323819,1.007667) (0.210091,2.637238) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/4_raxmlng_ancestral/P36894.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/4_raxmlng_ancestral/P36894.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/4_raxmlng_ancestral/P36894.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P36894/4_raxmlng_ancestral/P36894.raxml.log Analysis started: 04-Jun-2021 13:36:26 / finished: 04-Jun-2021 13:37:04 Elapsed time: 38.372 seconds