RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab.
Developed by: Alexey M. Kozlov and Alexandros Stamatakis.
Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth.
Latest version: https://github.com/amkozlov/raxml-ng
Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml

System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM

RAxML-NG was called at 06-Jul-2021 15:24:16 as follows:

raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/2_msa/P31629_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629 --seed 2 --threads 1 --tree rand{20} pars{20}

Analysis options:
  run mode: ML tree search
  start tree(s): random (20)
  random seed: 2
  tip-inner: OFF
  pattern compression: ON
  per-rate scalers: OFF
  site repeats: ON
  fast spr radius: AUTO
  spr subtree cutoff: 1.000000
  branch lengths: proportional (ML estimate, algorithm: NR-FAST)
  SIMD kernels: AVX2
  parallelization: coarse-grained (auto), NONE/sequential

[00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/2_msa/P31629_trimmed_msa.fasta
[00:00:00] Loaded alignment with 959 taxa and 20 sites

WARNING: Sequences tr_B4QB33_B4QB33_DROSI_7240 and tr_A0A0B4KFC0_A0A0B4KFC0_DROME_7227 are exactly identical!
WARNING: Sequences tr_B4QB33_B4QB33_DROSI_7240 and tr_B4HN39_B4HN39_DROSE_7238 are exactly identical!
WARNING: Sequences tr_B4QB33_B4QB33_DROSI_7240 and tr_B5DZD8_B5DZD8_DROPS_46245 are exactly identical!
WARNING: Sequences tr_B4QB33_B4QB33_DROSI_7240 and tr_B4H6B8_B4H6B8_DROPE_7234 are exactly identical!
WARNING: Sequences tr_B4QB33_B4QB33_DROSI_7240 and tr_A0A0Q9WDU9_A0A0Q9WDU9_DROVI_7244 are exactly identical!
WARNING: Sequences tr_B4QB33_B4QB33_DROSI_7240 and tr_A0A0M4EFS8_A0A0M4EFS8_DROBS_30019 are exactly identical!
WARNING: Sequences tr_B4QB33_B4QB33_DROSI_7240 and tr_A0A1W4U4Z5_A0A1W4U4Z5_DROFC_30025 are exactly identical!
WARNING: Sequences tr_E9H111_E9H111_DAPPU_6669 and tr_A0A162DC94_A0A162DC94_9CRUS_35525 are exactly identical!
WARNING: Sequences tr_E1ZVZ5_E1ZVZ5_CAMFO_104421 and tr_A0A158NQ38_A0A158NQ38_ATTCE_12957 are exactly identical!
WARNING: Sequences tr_E1ZVZ5_E1ZVZ5_CAMFO_104421 and tr_F4X5H9_F4X5H9_ACREC_103372 are exactly identical!
WARNING: Sequences tr_E1ZVZ5_E1ZVZ5_CAMFO_104421 and tr_E0VXZ9_E0VXZ9_PEDHC_121224 are exactly identical!
WARNING: Sequences tr_E1ZVZ5_E1ZVZ5_CAMFO_104421 and tr_A0A151IZB2_A0A151IZB2_9HYME_471704 are exactly identical!
WARNING: Sequences tr_E1ZVZ5_E1ZVZ5_CAMFO_104421 and tr_A0A195BJ52_A0A195BJ52_9HYME_520822 are exactly identical!
WARNING: Sequences tr_E1ZVZ5_E1ZVZ5_CAMFO_104421 and tr_A0A195FP05_A0A195FP05_9HYME_34720 are exactly identical!
WARNING: Sequences tr_E1ZVZ5_E1ZVZ5_CAMFO_104421 and tr_A0A195CUR0_A0A195CUR0_9HYME_456900 are exactly identical!
WARNING: Sequences tr_A0A0R4IM01_A0A0R4IM01_DANRE_7955 and tr_G1KC30_G1KC30_ANOCA_28377 are exactly identical!
WARNING: Sequences tr_A0A0R4IM01_A0A0R4IM01_DANRE_7955 and tr_A0A2D0SJG3_A0A2D0SJG3_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_H2MV82_H2MV82_ORYLA_8090 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_M4AGE7_M4AGE7_XIPMA_8083 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_H2UUJ0_H2UUJ0_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_H3CZF1_H3CZF1_TETNG_99883 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_G3PE21_G3PE21_GASAC_69293 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_H3ACU1_H3ACU1_LATCH_7897 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_W5KT49_W5KT49_ASTMX_7994 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_W5LWX0_W5LWX0_LEPOC_7918 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A087YGA6_A0A087YGA6_POEFO_48698 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A0N8JYL0_A0A0N8JYL0_9TELE_113540 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A0P7XSB5_A0A0P7XSB5_9TELE_113540 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A1S3M9V8_A0A1S3M9V8_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A1S3S8L9_A0A1S3S8L9_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A2I4CH98_A0A2I4CH98_9TELE_52670 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A060WBT9_A0A060WBT9_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A060YBP7_A0A060YBP7_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A2D0T034_A0A2D0T034_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A286Y903_A0A286Y903_DANRE_7955 and tr_A0A2U9CXP1_A0A2U9CXP1_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_F1RDL5_F1RDL5_DANRE_7955 and tr_A0A2D0RJV4_A0A2D0RJV4_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A1D5NZJ9_A0A1D5NZJ9_CHICK_9031 and tr_A0A2I0LK72_A0A2I0LK72_COLLI_8932 are exactly identical!
WARNING: Sequences tr_A0A1D5NZJ9_A0A1D5NZJ9_CHICK_9031 and tr_A0A226MD78_A0A226MD78_CALSU_9009 are exactly identical!
WARNING: Sequences tr_F1NFT7_F1NFT7_CHICK_9031 and tr_A0A091VV42_A0A091VV42_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_F1NFT7_F1NFT7_CHICK_9031 and tr_A0A087RB72_A0A087RB72_APTFO_9233 are exactly identical!
WARNING: Sequences tr_F1NFT7_F1NFT7_CHICK_9031 and tr_A0A091W8L7_A0A091W8L7_OPIHO_30419 are exactly identical!
WARNING: Sequences tr_F1NFT7_F1NFT7_CHICK_9031 and tr_A0A091GAU4_A0A091GAU4_9AVES_55661 are exactly identical!
WARNING: Sequences tr_F1NFT7_F1NFT7_CHICK_9031 and tr_A0A0A0AWL6_A0A0A0AWL6_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_F1NFT7_F1NFT7_CHICK_9031 and tr_A0A2I0M227_A0A2I0M227_COLLI_8932 are exactly identical!
WARNING: Sequences tr_F1NFT7_F1NFT7_CHICK_9031 and tr_A0A1V4KL34_A0A1V4KL34_PATFA_372326 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_G1MWG4_G1MWG4_MELGA_9103 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_H9GDY5_H9GDY5_ANOCA_28377 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_F6YRY9_F6YRY9_MONDO_13616 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_K7FA07_K7FA07_PELSI_13735 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_G3WS96_G3WS96_SARHA_9305 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_H0Z5Y3_H0Z5Y3_TAEGU_59729 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_H3BAW2_H3BAW2_LATCH_7897 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_U3KFZ3_U3KFZ3_FICAL_59894 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_U3IZ17_U3IZ17_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A151N116_A0A151N116_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A0Q3MJP8_A0A0Q3MJP8_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A091J653_A0A091J653_EGRGA_188379 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A091W157_A0A091W157_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A087QRB2_A0A087QRB2_APTFO_9233 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A091G880_A0A091G880_9AVES_55661 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A0A0ADN4_A0A0A0ADN4_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A2I0MXL9_A0A2I0MXL9_COLLI_8932 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A093G5J9_A0A093G5J9_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A091IV02_A0A091IV02_CALAN_9244 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A3Q0GRG2_A0A3Q0GRG2_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A1V4JWV2_A0A1V4JWV2_PATFA_372326 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A218UJU1_A0A218UJU1_9PASE_299123 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A226MYI0_A0A226MYI0_CALSU_9009 are exactly identical!
WARNING: Sequences tr_F1NWA0_F1NWA0_CHICK_9031 and tr_A0A226PYW5_A0A226PYW5_COLVI_9014 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and sp_Q3UHF7_ZEP2_MOUSE_10090 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_M3Z2W9_M3Z2W9_MUSPF_9669 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G1RYI8_G1RYI8_NOMLE_61853 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G1NWB7_G1NWB7_MYOLU_59463 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G3H6W6_G3H6W6_CRIGR_10029 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G3RQW1_G3RQW1_GORGO_9595 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_H2PKH2_H2PKH2_PONAB_9601 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G1NJV9_G1NJV9_MELGA_9103 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G1SNA1_G1SNA1_RABIT_9986 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_F1PBL9_F1PBL9_CANLF_9615 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_K7AEI2_K7AEI2_PANTR_9598 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_F6W985_F6W985_ORNAN_9258 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_F6T3P4_F6T3P4_MONDO_13616 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_F6ZC22_F6ZC22_HORSE_9796 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_W5NTS2_W5NTS2_SHEEP_9940 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and sp_Q00900_ZEP2_RAT_10116 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_I3N524_I3N524_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_H0XGS1_H0XGS1_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_H0V4W2_H0V4W2_CAVPO_10141 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and sp_P31629_ZEP2_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_F7HLJ5_F7HLJ5_MACMU_9544 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G5BL52_G5BL52_HETGA_10181 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_K7FQK1_K7FQK1_PELSI_13735 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G3T446_G3T446_LOXAF_9785 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G3W1X4_G3W1X4_SARHA_9305 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_H0ZL44_H0ZL44_TAEGU_59729 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_F6UB72_F6UB72_XENTR_8364 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_U3AR67_U3AR67_CALJA_9483 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_F1S700_F1S700_PIG_9823 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_D2GUS3_D2GUS3_AILME_9646 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_G7P310_G7P310_MACFA_9541 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_E1B842_E1B842_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_L5KDM0_L5KDM0_PTEAL_9402 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_M3X5V4_M3X5V4_FELCA_9685 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_U3KE52_U3KE52_FICAL_59894 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_U3J682_U3J682_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A096NLH4_A0A096NLH4_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A0D9RWW3_A0A0D9RWW3_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A151NLS8_A0A151NLS8_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A0Q3PWM0_A0A0Q3PWM0_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A091EX47_A0A091EX47_CORBR_85066 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A091JIV8_A0A091JIV8_EGRGA_188379 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A093QWT7_A0A093QWT7_9PASS_328815 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A091UT58_A0A091UT58_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A087R691_A0A087R691_APTFO_9233 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A093HFS5_A0A093HFS5_STRCA_441894 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A091W9V8_A0A091W9V8_OPIHO_30419 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A099ZLK6_A0A099ZLK6_TINGU_94827 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A091FQT3_A0A091FQT3_9AVES_55661 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A0A0ADI7_A0A0A0ADI7_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2I0MTF9_A0A2I0MTF9_COLLI_8932 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A093GCT7_A0A093GCT7_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A091I0U6_A0A091I0U6_CALAN_9244 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A1S2ZX35_A0A1S2ZX35_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A1S3G171_A0A1S3G171_DIPOR_10020 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A1L8G8J5_A0A1L8G8J5_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A1U7TNS2_A0A1U7TNS2_TARSY_1868482 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A1U8DIC8_A0A1U8DIC8_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A1U8BQW9_A0A1U8BQW9_MESAU_10036 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A1V4JLQ0_A0A1V4JLQ0_PATFA_372326 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A218UZR5_A0A218UZR5_9PASE_299123 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A226N3V3_A0A226N3V3_CALSU_9009 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A226PWC1_A0A226PWC1_COLVI_9014 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2K6ASD4_A0A2K6ASD4_MACNE_9545 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2K5Y363_A0A2K5Y363_MANLE_9568 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2R9CK09_A0A2R9CK09_PANPA_9597 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2U4CP32_A0A2U4CP32_TURTR_9739 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2U3VPK1_A0A2U3VPK1_ODORO_9708 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2Y9QTG6_A0A2Y9QTG6_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2Y9JG20_A0A2Y9JG20_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2Y9M8S9_A0A2Y9M8S9_DELLE_9749 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A2Y9EEZ4_A0A2Y9EEZ4_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A384CEL6_A0A384CEL6_URSMA_29073 are exactly identical!
WARNING: Sequences tr_F1P1B9_F1P1B9_CHICK_9031 and tr_A0A383Z858_A0A383Z858_BALAS_310752 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_G1MQB3_G1MQB3_MELGA_9103 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_H9G3H3_H9G3H3_ANOCA_28377 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_K7GD73_K7GD73_PELSI_13735 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_H3B8H9_H3B8H9_LATCH_7897 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_U3JEJ2_U3JEJ2_FICAL_59894 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_U3ISK5_U3ISK5_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_W5M7E2_W5M7E2_LEPOC_7918 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_A0A151PGW0_A0A151PGW0_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_A0A0Q3XAZ3_A0A0Q3XAZ3_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_A0A0A0B1K1_A0A0A0B1K1_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_A0A2I0LRY0_A0A2I0LRY0_COLLI_8932 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_A0A1U7QZV8_A0A1U7QZV8_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_R4GH84_R4GH84_CHICK_9031 and tr_A0A1V4JJ69_A0A1V4JJ69_PATFA_372326 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2I2Y529_A0A2I2Y529_GORGO_9595 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_J9P4T1_J9P4T1_CANLF_9615 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2I3SIN9_A0A2I3SIN9_PANTR_9598 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_I3MV72_I3MV72_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A286XL66_A0A286XL66_CAVPO_10141 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and sp_P0CG23_ZN853_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A1D5Q6W7_A0A1D5Q6W7_MACMU_9544 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2R8ML49_A0A2R8ML49_CALJA_9483 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A287BP48_A0A287BP48_PIG_9823 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A337S9N2_A0A337S9N2_FELCA_9685 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A096NUF5_A0A096NUF5_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A0D9RYM7_A0A0D9RYM7_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A1S3WE26_A0A1S3WE26_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A3Q0DPN1_A0A3Q0DPN1_TARSY_1868482 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2K5M9I6_A0A2K5M9I6_CERAT_9531 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2K6E3I2_A0A2K6E3I2_MACNE_9545 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2K5ZGV1_A0A2K5ZGV1_MANLE_9568 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2R9BC75_A0A2R9BC75_PANPA_9597 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2U4AZK6_A0A2U4AZK6_TURTR_9739 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2U3Z9G5_A0A2U3Z9G5_ODORO_9708 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2Y9R6P3_A0A2Y9R6P3_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2Y9JFF2_A0A2Y9JFF2_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2Y9PM11_A0A2Y9PM11_DELLE_9749 are exactly identical!
WARNING: Sequences tr_A0A1D5RM95_A0A1D5RM95_MOUSE_10090 and tr_A0A2Y9SM42_A0A2Y9SM42_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_M3YRJ9_M3YRJ9_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G1RNU5_G1RNU5_NOMLE_61853 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G1P304_G1P304_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G3HCN7_G3HCN7_CRIGR_10029 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G3RLC8_G3RLC8_GORGO_9595 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_H2N7S9_H2N7S9_PONAB_9601 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G1SEY8_G1SEY8_RABIT_9986 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_F1PQF2_F1PQF2_CANLF_9615 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2I3TXB5_A0A2I3TXB5_PANTR_9598 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_F6WVU0_F6WVU0_MONDO_13616 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_F7A5K8_F7A5K8_HORSE_9796 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_I3N6I2_I3N6I2_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_H0XKM1_H0XKM1_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A286XH62_A0A286XH62_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and sp_Q5T1R4_ZEP3_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_F7GJV4_F7GJV4_MACMU_9544 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G5AQJ3_G5AQJ3_HETGA_10181 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G3TJ60_G3TJ60_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G3VVU4_G3VVU4_SARHA_9305 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_F7I5I4_F7I5I4_CALJA_9483 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A287A7G3_A0A287A7G3_PIG_9823 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G1L0Y8_G1L0Y8_AILME_9646 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_G7NUE6_G7NUE6_MACFA_9541 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_F1MBK6_F1MBK6_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_L5L8X9_L5L8X9_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_M3WJY7_M3WJY7_FELCA_9685 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A096ML08_A0A096ML08_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A091E4W3_A0A091E4W3_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A0D9S7L6_A0A0D9S7L6_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A1S2ZXK0_A0A1S2ZXK0_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A1S3F6H4_A0A1S3F6H4_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A1U7UJF7_A0A1U7UJF7_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A1U8CTW3_A0A1U8CTW3_MESAU_10036 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2K5LT90_A0A2K5LT90_CERAT_9531 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2K6B1H1_A0A2K6B1H1_MACNE_9545 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2K5ZYR3_A0A2K5ZYR3_MANLE_9568 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2R9BEG6_A0A2R9BEG6_PANPA_9597 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2U4BK43_A0A2U4BK43_TURTR_9739 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2U3WDT4_A0A2U3WDT4_ODORO_9708 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2Y9DCM3_A0A2Y9DCM3_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2Y9IT16_A0A2Y9IT16_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A2Y9NI85_A0A2Y9NI85_DELLE_9749 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A384CS83_A0A384CS83_URSMA_29073 are exactly identical!
WARNING: Sequences sp_A2A884_ZEP3_MOUSE_10090 and tr_A0A383YPK8_A0A383YPK8_BALAS_310752 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_M3Y8X4_M3Y8X4_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G1PKN7_G1PKN7_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_H2P8H4_H2P8H4_PONAB_9601 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G1MX93_G1MX93_MELGA_9103 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G1SST1_G1SST1_RABIT_9986 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_E2RBS0_E2RBS0_CANLF_9615 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_K7AFV7_K7AFV7_PANTR_9598 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_W5QD83_W5QD83_SHEEP_9940 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A0G2JVA9_A0A0G2JVA9_RAT_10116 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_I3MHT9_I3MHT9_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_H0XFW3_H0XFW3_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_H0VNW2_H0VNW2_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and sp_Q9UKS7_IKZF2_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_F7B8A3_F7B8A3_MACMU_9544 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G5C866_G5C866_HETGA_10181 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G3T1G1_G3T1G1_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_F7BPD8_F7BPD8_XENTR_8364 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_F6Q749_F6Q749_CALJA_9483 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A287AWM2_A0A287AWM2_PIG_9823 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G1LN65_G1LN65_AILME_9646 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G7PLC5_G7PLC5_MACFA_9541 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_G3X7L0_G3X7L0_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2I2UG54_A0A2I2UG54_FELCA_9685 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A096MW48_A0A096MW48_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A091CMP2_A0A091CMP2_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A151N9L7_A0A151N9L7_ALLMI_8496 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A0Q3PC78_A0A0Q3PC78_AMAAE_12930 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A091ILL8_A0A091ILL8_EGRGA_188379 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A093PJ29_A0A093PJ29_9PASS_328815 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A091UM52_A0A091UM52_NIPNI_128390 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A093I391_A0A093I391_STRCA_441894 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A091W9F3_A0A091W9F3_OPIHO_30419 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A099YT22_A0A099YT22_TINGU_94827 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A091GLS1_A0A091GLS1_9AVES_55661 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A0A0AN76_A0A0A0AN76_CHAVO_50402 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2I0MIP4_A0A2I0MIP4_COLLI_8932 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A093I8E4_A0A093I8E4_DRYPU_118200 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A091IAZ5_A0A091IAZ5_CALAN_9244 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A1S3AJG0_A0A1S3AJG0_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A1S3ER65_A0A1S3ER65_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A1L8EPL4_A0A1L8EPL4_XENLA_8355 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A1L8EWT5_A0A1L8EWT5_XENLA_8355 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A1U7U1A5_A0A1U7U1A5_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A3Q0GF73_A0A3Q0GF73_ALLSI_38654 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A3Q0CQT3_A0A3Q0CQT3_MESAU_10036 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A1V4K719_A0A1V4K719_PATFA_372326 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2K5LBV8_A0A2K5LBV8_CERAT_9531 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2K6BT04_A0A2K6BT04_MACNE_9545 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2K5YC92_A0A2K5YC92_MANLE_9568 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2R9C8Y7_A0A2R9C8Y7_PANPA_9597 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2U4BN70_A0A2U4BN70_TURTR_9739 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2U3W090_A0A2U3W090_ODORO_9708 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2Y9QUG4_A0A2Y9QUG4_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2Y9IUR4_A0A2Y9IUR4_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A2Y9MW95_A0A2Y9MW95_DELLE_9749 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A384BSX7_A0A384BSX7_URSMA_29073 are exactly identical!
WARNING: Sequences sp_P81183_IKZF2_MOUSE_10090 and tr_A0A384AKR0_A0A384AKR0_BALAS_310752 are exactly identical!
WARNING: Sequences sp_Q03172_ZEP1_MOUSE_10090 and tr_I3NHS8_I3NHS8_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_Q6P560_ZN182_MOUSE_10090 and tr_M0RBY6_M0RBY6_RAT_10116 are exactly identical!
WARNING: Sequences tr_Q8C0Q5_Q8C0Q5_MOUSE_10090 and tr_D4A171_D4A171_RAT_10116 are exactly identical!
WARNING: Sequences tr_Q8C0Q5_Q8C0Q5_MOUSE_10090 and tr_H0V226_H0V226_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_M3XPF8_M3XPF8_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2I3HUB7_A0A2I3HUB7_NOMLE_61853 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G1QDM6_G1QDM6_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G3R7D9_G3R7D9_GORGO_9595 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_H2NHN0_H2NHN0_PONAB_9601 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G1U0X5_G1U0X5_RABIT_9986 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_J9NTQ0_J9NTQ0_CANLF_9615 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2J8Q1G0_A0A2J8Q1G0_PANTR_9598 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_H9H5Y6_H9H5Y6_MONDO_13616 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_F6YR65_F6YR65_HORSE_9796 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_W5PLL1_W5PLL1_SHEEP_9940 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_D4A636_D4A636_RAT_10116 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_I3MFQ0_I3MFQ0_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_H0XPV9_H0XPV9_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and sp_Q9H2S9_IKZF4_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G7N7B0_G7N7B0_MACMU_9544 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G5BB92_G5BB92_HETGA_10181 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_K7F588_K7F588_PELSI_13735 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G3UII7_G3UII7_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G3VZ64_G3VZ64_SARHA_9305 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2R8PL87_A0A2R8PL87_CALJA_9483 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A287A3P0_A0A287A3P0_PIG_9823 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G1L952_G1L952_AILME_9646 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_G7PIG3_G7PIG3_MACFA_9541 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_F1N670_F1N670_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_L5KV14_L5KV14_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_M3WSR9_M3WSR9_FELCA_9685 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A0D9QYY9_A0A0D9QYY9_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A151NR76_A0A151NR76_ALLMI_8496 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A1S3ADT5_A0A1S3ADT5_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A1U7UAC6_A0A1U7UAC6_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A1U7SRL9_A0A1U7SRL9_ALLSI_38654 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A1U8CJF0_A0A1U8CJF0_MESAU_10036 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2K5LTX4_A0A2K5LTX4_CERAT_9531 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2K6AQT5_A0A2K6AQT5_MACNE_9545 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2K5YE94_A0A2K5YE94_MANLE_9568 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2R9CIJ3_A0A2R9CIJ3_PANPA_9597 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2U3W197_A0A2U3W197_ODORO_9708 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2U3XBG7_A0A2U3XBG7_LEPWE_9713 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2Y9FXS2_A0A2Y9FXS2_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2Y9KXL4_A0A2Y9KXL4_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2Y9NEC2_A0A2Y9NEC2_DELLE_9749 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A2Y9FRT1_A0A2Y9FRT1_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A384DTR3_A0A384DTR3_URSMA_29073 are exactly identical!
WARNING: Sequences sp_Q8C208_IKZF4_MOUSE_10090 and tr_A0A383ZXG8_A0A383ZXG8_BALAS_310752 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G1QIW3_G1QIW3_NOMLE_61853 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G1PTR7_G1PTR7_MYOLU_59463 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G3H0H0_G3H0H0_CRIGR_10029 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G3RJ96_G3RJ96_GORGO_9595 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_H2PHY2_H2PHY2_PONAB_9601 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G1T371_G1T371_RABIT_9986 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_F1PBA6_F1PBA6_CANLF_9615 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2I3SHZ1_A0A2I3SHZ1_PANTR_9598 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_F6T0L7_F6T0L7_HORSE_9796 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_F1M9H4_F1M9H4_RAT_10116 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_H0X738_H0X738_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_H0VAB3_H0VAB3_CAVPO_10141 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and sp_P15822_ZEP1_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_F6UQH4_F6UQH4_MACMU_9544 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G5BN53_G5BN53_HETGA_10181 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G3T6R1_G3T6R1_LOXAF_9785 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_F6SGT9_F6SGT9_XENTR_8364 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_U3EM66_U3EM66_CALJA_9483 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A287AE11_A0A287AE11_PIG_9823 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G1L7J3_G1L7J3_AILME_9646 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_G7P4F4_G7P4F4_MACFA_9541 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_F1MI25_F1MI25_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_L5KW00_L5KW00_PTEAL_9402 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_W5MMR1_W5MMR1_LEPOC_7918 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A096NKY7_A0A096NKY7_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A0D9R579_A0A0D9R579_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A1S3GST3_A0A1S3GST3_DIPOR_10020 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A1L8FXZ3_A0A1L8FXZ3_XENLA_8355 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A1U7SY55_A0A1U7SY55_TARSY_1868482 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A1U7Q759_A0A1U7Q759_MESAU_10036 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2K5MDF9_A0A2K5MDF9_CERAT_9531 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2K6AXU2_A0A2K6AXU2_MACNE_9545 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2K6A1Y3_A0A2K6A1Y3_MANLE_9568 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2R9A6G7_A0A2R9A6G7_PANPA_9597 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2U4C5T1_A0A2U4C5T1_TURTR_9739 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2U3ZJ12_A0A2U3ZJ12_ODORO_9708 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2U3XMK1_A0A2U3XMK1_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2Y9RNT9_A0A2Y9RNT9_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2Y9KW76_A0A2Y9KW76_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2Y9P5M2_A0A2Y9P5M2_DELLE_9749 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A2Y9SG83_A0A2Y9SG83_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A384C8X3_A0A384C8X3_URSMA_29073 are exactly identical!
WARNING: Sequences tr_M3XNM2_M3XNM2_MUSPF_9669 and tr_A0A383ZG65_A0A383ZG65_BALAS_310752 are exactly identical!
WARNING: Sequences tr_M3XPZ5_M3XPZ5_MUSPF_9669 and tr_J9NUF9_J9NUF9_CANLF_9615 are exactly identical!
WARNING: Sequences tr_M3XPZ5_M3XPZ5_MUSPF_9669 and tr_M3W030_M3W030_FELCA_9685 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_J9P0I0_J9P0I0_CANLF_9615 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_H0WQV6_H0WQV6_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_G7PZ22_G7PZ22_MACFA_9541 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2I2UB48_A0A2I2UB48_FELCA_9685 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2I3MEB8_A0A2I3MEB8_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2K5NZC2_A0A2K5NZC2_CERAT_9531 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2K6E8I7_A0A2K6E8I7_MACNE_9545 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2K6A449_A0A2K6A449_MANLE_9568 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2U4ATQ9_A0A2U4ATQ9_TURTR_9739 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2U3ZKC5_A0A2U3ZKC5_ODORO_9708 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2U3YRZ0_A0A2U3YRZ0_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2Y9IJV5_A0A2Y9IJV5_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A2Y9S2H1_A0A2Y9S2H1_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_M3Y5J1_M3Y5J1_MUSPF_9669 and tr_A0A383ZK43_A0A383ZK43_BALAS_310752 are exactly identical!
WARNING: Sequences tr_M3YB55_M3YB55_MUSPF_9669 and tr_A0A2Y9LC03_A0A2Y9LC03_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_A0A3B3HWE5_A0A3B3HWE5_ORYLA_8090 and tr_A0A1S3SRL3_A0A1S3SRL3_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A3B3HWE5_A0A3B3HWE5_ORYLA_8090 and tr_A0A060W502_A0A060W502_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A3B3HWE5_A0A3B3HWE5_ORYLA_8090 and tr_A0A060WS62_A0A060WS62_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_B4J845_B4J845_DROGR_7222 and tr_B4KQ26_B4KQ26_DROMO_7230 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_G3QEI2_G3QEI2_GORGO_9595 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_K7ESX2_K7ESX2_PONAB_9601 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_A0A2I3SXN0_A0A2I3SXN0_PANTR_9598 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and sp_O15535_ZSC9_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_A0A1D5RGV3_A0A1D5RGV3_MACMU_9544 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_G7P3S6_G7P3S6_MACFA_9541 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_A0A096NLJ9_A0A096NLJ9_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_A0A2K5L6R0_A0A2K5L6R0_CERAT_9531 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_A0A2K6E8H7_A0A2K6E8H7_MACNE_9545 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_A0A2K6AJP0_A0A2K6AJP0_MANLE_9568 are exactly identical!
WARNING: Sequences tr_A0A2I3GJX2_A0A2I3GJX2_NOMLE_61853 and tr_A0A2R8ZPX2_A0A2R8ZPX2_PANPA_9597 are exactly identical!
WARNING: Sequences tr_A0A2I3HI62_A0A2I3HI62_NOMLE_61853 and tr_H2QAX9_H2QAX9_PANTR_9598 are exactly identical!
WARNING: Sequences tr_A0A2I3HI62_A0A2I3HI62_NOMLE_61853 and sp_Q96H86_ZN764_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_A0A2I3HI62_A0A2I3HI62_NOMLE_61853 and tr_A0A2R9ABZ5_A0A2R9ABZ5_PANPA_9597 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_G3H6G6_G3H6G6_CRIGR_10029 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_H2NXF7_H2NXF7_PONAB_9601 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_F1PED5_F1PED5_CANLF_9615 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_H2RH32_H2RH32_PANTR_9598 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_F6YFY8_F6YFY8_HORSE_9796 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_I3NAL6_I3NAL6_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and sp_Q96PQ6_ZN317_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_G7NNB5_G7NNB5_MACMU_9544 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_F7ISH9_F7ISH9_CALJA_9483 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_G1LNC8_G1LNC8_AILME_9646 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_G7PZ41_G7PZ41_MACFA_9541 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_E1BAK2_E1BAK2_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_L5KQL1_L5KQL1_PTEAL_9402 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A337RZU0_A0A337RZU0_FELCA_9685 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A096NPJ6_A0A096NPJ6_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A0D9R5W8_A0A0D9R5W8_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A1U7SFV3_A0A1U7SFV3_TARSY_1868482 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A2K5MG20_A0A2K5MG20_CERAT_9531 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A2K6B331_A0A2K6B331_MACNE_9545 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A2K6A086_A0A2K6A086_MANLE_9568 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A2R9B2Z8_A0A2R9B2Z8_PANPA_9597 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A2U3ZEB3_A0A2U3ZEB3_ODORO_9708 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A2U3YA90_A0A2U3YA90_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A2Y9F5V6_A0A2Y9F5V6_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_A0A2I3HNU6_A0A2I3HNU6_NOMLE_61853 and tr_A0A384DA77_A0A384DA77_URSMA_29073 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_G3R6B0_G3R6B0_GORGO_9595 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2J8S1G2_A0A2J8S1G2_PONAB_9601 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_H2QF98_H2QF98_PANTR_9598 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A287CXJ3_A0A287CXJ3_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and sp_Q13360_ZN177_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_F7A7M4_F7A7M4_MACMU_9544 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_G5B347_G5B347_HETGA_10181 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_U3DI71_U3DI71_CALJA_9483 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A287BLQ3_A0A287BLQ3_PIG_9823 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_G1L311_G1L311_AILME_9646 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_G7PZ49_G7PZ49_MACFA_9541 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A337SA08_A0A337SA08_FELCA_9685 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A0A0MUB1_A0A0A0MUB1_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A0D9R5S0_A0A0D9R5S0_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2K5KVX6_A0A2K5KVX6_CERAT_9531 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2K6DUY9_A0A2K6DUY9_MACNE_9545 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2K5XT92_A0A2K5XT92_MANLE_9568 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2R9B5V5_A0A2R9B5V5_PANPA_9597 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2U4B614_A0A2U4B614_TURTR_9739 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2U3ZEC0_A0A2U3ZEC0_ODORO_9708 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2U3YAA0_A0A2U3YAA0_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2Y9DQ77_A0A2Y9DQ77_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2Y9LLY7_A0A2Y9LLY7_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2Y9LWQ4_A0A2Y9LWQ4_DELLE_9749 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A2Y9ELZ9_A0A2Y9ELZ9_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A384D9K3_A0A384D9K3_URSMA_29073 are exactly identical!
WARNING: Sequences tr_G1RMS8_G1RMS8_NOMLE_61853 and tr_A0A383Z1P8_A0A383Z1P8_BALAS_310752 are exactly identical!
WARNING: Sequences tr_G1PJN5_G1PJN5_MYOLU_59463 and tr_H0X459_H0X459_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_G3QTC2_G3QTC2_GORGO_9595 and tr_H2R451_H2R451_PANTR_9598 are exactly identical!
WARNING: Sequences tr_G3QTC2_G3QTC2_GORGO_9595 and tr_A0A2R9A197_A0A2R9A197_PANPA_9597 are exactly identical!
WARNING: Sequences tr_G3SDS4_G3SDS4_GORGO_9595 and tr_A0A2J8KMQ6_A0A2J8KMQ6_PANTR_9598 are exactly identical!
WARNING: Sequences tr_G3SDS4_G3SDS4_GORGO_9595 and sp_Q5JPB2_ZN831_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_G3SDS4_G3SDS4_GORGO_9595 and tr_A0A2R9B2X9_A0A2R9B2X9_PANPA_9597 are exactly identical!
WARNING: Sequences tr_H2NXG9_H2NXG9_PONAB_9601 and tr_H2QFA1_H2QFA1_PANTR_9598 are exactly identical!
WARNING: Sequences tr_H2NXG9_H2NXG9_PONAB_9601 and sp_Q8N587_ZN561_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_H2NXG9_H2NXG9_PONAB_9601 and tr_A0A0D9R5N4_A0A0D9R5N4_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_H2NXG9_H2NXG9_PONAB_9601 and tr_A0A2K6BL78_A0A2K6BL78_MACNE_9545 are exactly identical!
WARNING: Sequences tr_H2NXG9_H2NXG9_PONAB_9601 and tr_A0A2K5ZZT9_A0A2K5ZZT9_MANLE_9568 are exactly identical!
WARNING: Sequences tr_H2NXG9_H2NXG9_PONAB_9601 and tr_A0A2R9BIL5_A0A2R9BIL5_PANPA_9597 are exactly identical!
WARNING: Sequences tr_B5U8M3_B5U8M3_CAEEL_6239 and tr_A0A2H2HVP1_A0A2H2HVP1_CAEJA_281687 are exactly identical!
WARNING: Sequences tr_B5U8M3_B5U8M3_CAEEL_6239 and tr_G0MHP3_G0MHP3_CAEBE_135651 are exactly identical!
WARNING: Sequences tr_B5U8M3_B5U8M3_CAEEL_6239 and tr_E3M246_E3M246_CAERE_31234 are exactly identical!
WARNING: Sequences tr_B5U8M3_B5U8M3_CAEEL_6239 and tr_A0A1I7U145_A0A1I7U145_9PELO_1561998 are exactly identical!
WARNING: Sequences tr_B5U8M3_B5U8M3_CAEEL_6239 and tr_A0A261CNU2_A0A261CNU2_9PELO_1503980 are exactly identical!
WARNING: Sequences sp_Q966L8_CHE1_CAEEL_6239 and tr_G0NZ69_G0NZ69_CAEBE_135651 are exactly identical!
WARNING: Sequences sp_Q966L8_CHE1_CAEEL_6239 and tr_E3MVT6_E3MVT6_CAERE_31234 are exactly identical!
WARNING: Sequences sp_Q966L8_CHE1_CAEEL_6239 and tr_A0A261BG16_A0A261BG16_9PELO_1503980 are exactly identical!
WARNING: Sequences tr_A0A2J8MM58_A0A2J8MM58_PANTR_9598 and sp_Q96N95_ZN396_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_F7GID4_F7GID4_MONDO_13616 and tr_G3VEB6_G3VEB6_SARHA_9305 are exactly identical!
WARNING: Sequences tr_B0VZR2_B0VZR2_CULQU_7176 and tr_Q7QJS8_Q7QJS8_ANOGA_7165 are exactly identical!
WARNING: Sequences tr_B0VZR2_B0VZR2_CULQU_7176 and tr_A0A084VFB2_A0A084VFB2_ANOSI_74873 are exactly identical!
WARNING: Sequences sp_A1L1L7_ZN426_RAT_10116 and tr_A0A1U8C8V6_A0A1U8C8V6_MESAU_10036 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_I3KSA8_I3KSA8_ORENI_8128 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_A0A3B5K8W5_A0A3B5K8W5_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_H3C667_H3C667_TETNG_99883 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_A0A096MAQ6_A0A096MAQ6_POEFO_48698 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_A0A0P7WER1_A0A0P7WER1_9TELE_113540 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_A0A2I4B9W5_A0A2I4B9W5_9TELE_52670 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_A0A060WNL9_A0A060WNL9_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A3B5PUS0_A0A3B5PUS0_XIPMA_8083 and tr_A0A2U9BFY5_A0A2U9BFY5_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_A0A3B5Q9Y0_A0A3B5Q9Y0_XIPMA_8083 and tr_I3K7Y5_I3K7Y5_ORENI_8128 are exactly identical!
WARNING: Sequences tr_A0A3B5Q9Y0_A0A3B5Q9Y0_XIPMA_8083 and tr_H2TS15_H2TS15_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_A0A3B5Q9Y0_A0A3B5Q9Y0_XIPMA_8083 and tr_H3CFW1_H3CFW1_TETNG_99883 are exactly identical!
WARNING: Sequences tr_A0A3B5Q9Y0_A0A3B5Q9Y0_XIPMA_8083 and tr_G3NCL0_G3NCL0_GASAC_69293 are exactly identical!
WARNING: Sequences tr_A0A3B5Q9Y0_A0A3B5Q9Y0_XIPMA_8083 and tr_A0A087XHS1_A0A087XHS1_POEFO_48698 are exactly identical!
WARNING: Sequences tr_A0A3B5Q9Y0_A0A3B5Q9Y0_XIPMA_8083 and tr_A0A2I4CMC4_A0A2I4CMC4_9TELE_52670 are exactly identical!
WARNING: Sequences tr_A0A3B5QX73_A0A3B5QX73_XIPMA_8083 and tr_I3IVS9_I3IVS9_ORENI_8128 are exactly identical!
WARNING: Sequences tr_A0A3B5QX73_A0A3B5QX73_XIPMA_8083 and tr_H2SY07_H2SY07_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_A0A3B5QX73_A0A3B5QX73_XIPMA_8083 and tr_H3DPS5_H3DPS5_TETNG_99883 are exactly identical!
WARNING: Sequences tr_A0A3B5QX73_A0A3B5QX73_XIPMA_8083 and tr_G3PD60_G3PD60_GASAC_69293 are exactly identical!
WARNING: Sequences tr_A0A3B5QX73_A0A3B5QX73_XIPMA_8083 and tr_A0A087YDT4_A0A087YDT4_POEFO_48698 are exactly identical!
WARNING: Sequences tr_A0A3B5QX73_A0A3B5QX73_XIPMA_8083 and tr_A0A2I4CUK7_A0A2I4CUK7_9TELE_52670 are exactly identical!
WARNING: Sequences tr_A0A3B5QX73_A0A3B5QX73_XIPMA_8083 and tr_A0A2U9CHS1_A0A2U9CHS1_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_M3ZTS5_M3ZTS5_XIPMA_8083 and tr_A0A096LW39_A0A096LW39_POEFO_48698 are exactly identical!
WARNING: Sequences tr_M4A875_M4A875_XIPMA_8083 and tr_I3JI22_I3JI22_ORENI_8128 are exactly identical!
WARNING: Sequences tr_M4A875_M4A875_XIPMA_8083 and tr_H2UFN6_H2UFN6_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_M4A875_M4A875_XIPMA_8083 and tr_H3CWB1_H3CWB1_TETNG_99883 are exactly identical!
WARNING: Sequences tr_M4A875_M4A875_XIPMA_8083 and tr_A0A087XTW0_A0A087XTW0_POEFO_48698 are exactly identical!
WARNING: Sequences tr_M4A875_M4A875_XIPMA_8083 and tr_A0A2I4BZX4_A0A2I4BZX4_9TELE_52670 are exactly identical!
WARNING: Sequences tr_M4A875_M4A875_XIPMA_8083 and tr_A0A2U9AZ19_A0A2U9AZ19_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_A0A087ZNE9_A0A087ZNE9_APIME_7460 and tr_A0A026WN46_A0A026WN46_OOCBI_2015173 are exactly identical!
WARNING: Sequences tr_A0A087ZNE9_A0A087ZNE9_APIME_7460 and tr_A0A0L7QPS7_A0A0L7QPS7_9HYME_597456 are exactly identical!
WARNING: Sequences tr_A0A087ZNE9_A0A087ZNE9_APIME_7460 and tr_A0A2A3E296_A0A2A3E296_APICC_94128 are exactly identical!
WARNING: Sequences tr_A0A088A781_A0A088A781_APIME_7460 and tr_A0A0L7R7K4_A0A0L7R7K4_9HYME_597456 are exactly identical!
WARNING: Sequences tr_A0A088A781_A0A088A781_APIME_7460 and tr_A0A2A3E7R1_A0A2A3E7R1_APICC_94128 are exactly identical!
WARNING: Sequences tr_H9J2D5_H9J2D5_BOMMO_7091 and tr_A0A2A4JZ72_A0A2A4JZ72_HELVI_7102 are exactly identical!
WARNING: Sequences tr_A0A158NQH1_A0A158NQH1_ATTCE_12957 and tr_A0A151HYC0_A0A151HYC0_9HYME_520822 are exactly identical!
WARNING: Sequences tr_A0A158NQH1_A0A158NQH1_ATTCE_12957 and tr_A0A195CCL4_A0A195CCL4_9HYME_456900 are exactly identical!
WARNING: Sequences tr_I3K2E4_I3K2E4_ORENI_8128 and tr_G3P345_G3P345_GASAC_69293 are exactly identical!
WARNING: Sequences tr_I3MGL2_I3MGL2_ICTTR_43179 and tr_G5C295_G5C295_HETGA_10181 are exactly identical!
WARNING: Sequences tr_I3MGL2_I3MGL2_ICTTR_43179 and tr_A0A2Y9P435_A0A2Y9P435_DELLE_9749 are exactly identical!
WARNING: Sequences tr_I3MGL2_I3MGL2_ICTTR_43179 and tr_A0A2Y9PBR7_A0A2Y9PBR7_DELLE_9749 are exactly identical!
WARNING: Sequences tr_I3MGL2_I3MGL2_ICTTR_43179 and tr_A0A2Y9SGF8_A0A2Y9SGF8_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_A0A3B5KAI7_A0A3B5KAI7_TAKRU_31033 and tr_H2S4G2_H2S4G2_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_A0A1D5Q959_A0A1D5Q959_MACMU_9544 and tr_A0A2K6AWZ9_A0A2K6AWZ9_MACNE_9545 are exactly identical!
WARNING: Sequences tr_F7HT45_F7HT45_MACMU_9544 and tr_A0A096NNF6_A0A096NNF6_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_F7HT45_F7HT45_MACMU_9544 and tr_A0A2K5MYL6_A0A2K5MYL6_CERAT_9531 are exactly identical!
WARNING: Sequences tr_F7HT45_F7HT45_MACMU_9544 and tr_A0A2K6D2B4_A0A2K6D2B4_MACNE_9545 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V0SDV1_A0A0V0SDV1_9BILA_6336 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V1CZ94_A0A0V1CZ94_TRIBR_45882 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V0X2X4_A0A0V0X2X4_9BILA_92179 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V0V5Q2_A0A0V0V5Q2_9BILA_181606 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V1LIE7_A0A0V1LIE7_9BILA_6335 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V1AHA6_A0A0V1AHA6_9BILA_990121 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V0XIN1_A0A0V0XIN1_TRIPS_6337 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V1MMZ4_A0A0V1MMZ4_9BILA_268474 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V1NWA5_A0A0V1NWA5_9BILA_92180 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V1I0U0_A0A0V1I0U0_9BILA_268475 are exactly identical!
WARNING: Sequences tr_E5S6M2_E5S6M2_TRISP_6334 and tr_A0A0V0U485_A0A0V0U485_9BILA_144512 are exactly identical!
WARNING: Sequences tr_G3SR68_G3SR68_LOXAF_9785 and tr_A0A2Y9RBS4_A0A2Y9RBS4_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_F6QU53_F6QU53_XENTR_8364 and tr_A0A1L8H7H8_A0A1L8H7H8_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F6QU53_F6QU53_XENTR_8364 and tr_A0A1L8HEA5_A0A1L8HEA5_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F6WD25_F6WD25_XENTR_8364 and tr_A0A1L8FGM2_A0A1L8FGM2_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F6WD25_F6WD25_XENTR_8364 and tr_A0A1L8FMV7_A0A1L8FMV7_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F7EJD5_F7EJD5_XENTR_8364 and tr_A0A1L8H9T3_A0A1L8H9T3_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F7EJD5_F7EJD5_XENTR_8364 and tr_A0A1L8HHX3_A0A1L8HHX3_XENLA_8355 are exactly identical!
WARNING: Sequences tr_A8XRB2_A8XRB2_CAEBR_6238 and tr_A0A2G5SQ42_A0A2G5SQ42_9PELO_1611254 are exactly identical!
WARNING: Sequences tr_B3RZ20_B3RZ20_TRIAD_10228 and tr_A0A369RRG0_A0A369RRG0_9METZ_287889 are exactly identical!
WARNING: Sequences tr_S2IVH6_S2IVH6_MUCC1_1220926 and tr_A0A168Q3L0_A0A168Q3L0_MUCCL_747725 are exactly identical!
WARNING: Sequences tr_R7TJT8_R7TJT8_CAPTE_283909 and tr_R7UU82_R7UU82_CAPTE_283909 are exactly identical!
WARNING: Sequences tr_U3IXP0_U3IXP0_ANAPL_8839 and tr_A0A0Q3X9Q0_A0A0Q3X9Q0_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_U3IXP0_U3IXP0_ANAPL_8839 and tr_A0A093HY07_A0A093HY07_STRCA_441894 are exactly identical!
WARNING: Sequences tr_U3IXP0_U3IXP0_ANAPL_8839 and tr_A0A226MVA3_A0A226MVA3_CALSU_9009 are exactly identical!
WARNING: Sequences tr_U3IXP0_U3IXP0_ANAPL_8839 and tr_A0A226NXW6_A0A226NXW6_COLVI_9014 are exactly identical!
WARNING: Sequences tr_U3J9R1_U3J9R1_ANAPL_8839 and tr_A0A091ULK7_A0A091ULK7_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A158PQ21_A0A158PQ21_BRUPA_6280 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A0R3QZ97_A0A0R3QZ97_9BILA_42155 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A158Q711_A0A158Q711_9BILA_1147741 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A183HM61_A0A183HM61_9BILA_387005 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A182EAX1_A0A182EAX1_ONCOC_42157 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A182EBV2_A0A182EBV2_ONCOC_42157 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A182ECY7_A0A182ECY7_ONCOC_42157 are exactly identical!
WARNING: Sequences tr_A0A2K6VY29_A0A2K6VY29_ONCVO_6282 and tr_A0A1I7VNZ3_A0A1I7VNZ3_LOALO_7209 are exactly identical!
WARNING: Sequences tr_A0A067R189_A0A067R189_ZOONE_136037 and tr_A0A2J7R663_A0A2J7R663_9NEOP_105785 are exactly identical!
WARNING: Sequences tr_A0A087X7W4_A0A087X7W4_POEFO_48698 and tr_A0A2I4ATL6_A0A2I4ATL6_9TELE_52670 are exactly identical!
WARNING: Sequences tr_A0A0K0FMJ3_A0A0K0FMJ3_STRVS_75913 and tr_A0A0K0ER35_A0A0K0ER35_STRER_6248 are exactly identical!
WARNING: Sequences tr_A0A0K0FMJ3_A0A0K0FMJ3_STRVS_75913 and tr_A0A0N4Z165_A0A0N4Z165_PARTI_131310 are exactly identical!
WARNING: Sequences tr_A0A0K0FMJ3_A0A0K0FMJ3_STRVS_75913 and tr_A0A0N5BNF3_A0A0N5BNF3_STREA_174720 are exactly identical!
WARNING: Sequences tr_A0A0A1P7X4_A0A0A1P7X4_9FUNG_58291 and tr_A0A2G4SKF4_A0A2G4SKF4_9FUNG_1340429 are exactly identical!
WARNING: Sequences tr_A0A151LYH2_A0A151LYH2_ALLMI_8496 and tr_A0A091V014_A0A091V014_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_A0A151LYH2_A0A151LYH2_ALLMI_8496 and tr_A0A3Q0FNK5_A0A3Q0FNK5_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A151MER3_A0A151MER3_ALLMI_8496 and tr_A0A1U8DKY8_A0A1U8DKY8_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A151NVJ3_A0A151NVJ3_ALLMI_8496 and tr_A0A3Q0HK58_A0A3Q0HK58_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A151P6L8_A0A151P6L8_ALLMI_8496 and tr_A0A093I539_A0A093I539_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_A0A151P6L8_A0A151P6L8_ALLMI_8496 and tr_A0A1U8D0G2_A0A1U8D0G2_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A194QUR0_A0A194QUR0_PAPMA_76193 and tr_A0A194PUZ8_A0A194PUZ8_PAPXU_66420 are exactly identical!
WARNING: Sequences tr_A0A091UI29_A0A091UI29_NIPNI_128390 and tr_A0A0A0AHX5_A0A0A0AHX5_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_A0A0V0WUD9_A0A0V0WUD9_9BILA_92179 and tr_A0A0V0V405_A0A0V0V405_9BILA_181606 are exactly identical!
WARNING: Sequences tr_A0A0V0WUD9_A0A0V0WUD9_9BILA_92179 and tr_A0A0V0ZXX6_A0A0V0ZXX6_9BILA_990121 are exactly identical!
WARNING: Sequences tr_A0A0V0WUD9_A0A0V0WUD9_9BILA_92179 and tr_A0A0V0Y8A5_A0A0V0Y8A5_TRIPS_6337 are exactly identical!
WARNING: Sequences tr_A0A0V0WUD9_A0A0V0WUD9_9BILA_92179 and tr_A0A0V1PCE4_A0A0V1PCE4_9BILA_92180 are exactly identical!
WARNING: Sequences tr_A0A0V0WUD9_A0A0V0WUD9_9BILA_92179 and tr_A0A0V0U694_A0A0V0U694_9BILA_144512 are exactly identical!
WARNING: Sequences tr_A0A1S3AR34_A0A1S3AR34_ERIEU_9365 and tr_A0A1S3M516_A0A1S3M516_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3AR34_A0A1S3AR34_ERIEU_9365 and tr_A0A1S3Q2F8_A0A1S3Q2F8_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3AR34_A0A1S3AR34_ERIEU_9365 and tr_A0A060W2B3_A0A060W2B3_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3HCW7_A0A1S3HCW7_LINUN_7574 and tr_A0A1S3JG61_A0A1S3JG61_LINUN_7574 are exactly identical!
WARNING: Sequences tr_A0A1S3JJV6_A0A1S3JJV6_LINUN_7574 and tr_A0A1S3JNF5_A0A1S3JNF5_LINUN_7574 are exactly identical!
WARNING: Sequences tr_A0A1S3JJV6_A0A1S3JJV6_LINUN_7574 and tr_A0A1S3JNF9_A0A1S3JNF9_LINUN_7574 are exactly identical!
WARNING: Sequences tr_A0A1S3JJV6_A0A1S3JJV6_LINUN_7574 and tr_A0A1S3JPH2_A0A1S3JPH2_LINUN_7574 are exactly identical!
WARNING: Sequences tr_A0A1S3M3N0_A0A1S3M3N0_SALSA_8030 and tr_A0A1S3Q003_A0A1S3Q003_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3M3N0_A0A1S3M3N0_SALSA_8030 and tr_A0A060WC96_A0A060WC96_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3PBK1_A0A1S3PBK1_SALSA_8030 and tr_A0A060X6V9_A0A060X6V9_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3QEH4_A0A1S3QEH4_SALSA_8030 and tr_A0A1S3RD09_A0A1S3RD09_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3QEH4_A0A1S3QEH4_SALSA_8030 and tr_A0A1S3REA4_A0A1S3REA4_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3QEH4_A0A1S3QEH4_SALSA_8030 and tr_A0A1S3SLW8_A0A1S3SLW8_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3QEH4_A0A1S3QEH4_SALSA_8030 and tr_A0A060Y5I0_A0A060Y5I0_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3RTQ4_A0A1S3RTQ4_SALSA_8030 and tr_A0A060WKZ2_A0A060WKZ2_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A2A2JTL4_A0A2A2JTL4_9BILA_2018661 and tr_A0A2A2K9F6_A0A2A2K9F6_9BILA_2018661 are exactly identical!
WARNING: Sequences tr_A0A2D0PLP7_A0A2D0PLP7_ICTPU_7998 and tr_A0A2D0PMP5_A0A2D0PMP5_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A2J7Q8V5_A0A2J7Q8V5_9NEOP_105785 and tr_A0A2P8YJ76_A0A2P8YJ76_BLAGE_6973 are exactly identical!
WARNING: Duplicate sequences found: 603

NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) 
NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629.raxml.reduced.phy

Alignment comprises 1 partitions and 20 patterns

Partition 0: noname
Model: LG4X+R4
Alignment sites / patterns: 20 / 20
Gaps: 2.50 %
Invariant sites: 0.00 %


NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629.raxml.rba

Parallelization scheme autoconfig: 1 worker(s) x 1 thread(s)

Parallel reduction/worker buffer size: 1 KB  / 0 KB

[00:00:00] Generating 20 random starting tree(s) with 959 taxa
[00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 20 / 1600
[00:00:00] Data distribution: max. searches per worker: 20

Starting ML tree search with 20 distinct starting trees

[00:00:00 -36062.609214] Initial branch length optimization
[00:00:00 -27172.046171] Model parameter optimization (eps = 10.000000)
[00:00:46 -26751.941799] AUTODETECT spr round 1 (radius: 5)
[00:01:32 -19024.867797] AUTODETECT spr round 2 (radius: 10)
[00:02:22 -14530.846622] AUTODETECT spr round 3 (radius: 15)
[00:03:18 -11593.254038] AUTODETECT spr round 4 (radius: 20)
[00:04:17 -10092.002274] AUTODETECT spr round 5 (radius: 25)
[00:05:21 -8834.803025] SPR radius for FAST iterations: 25 (autodetect)
[00:05:21 -8834.803025] Model parameter optimization (eps = 3.000000)
[00:05:38 -8633.112977] FAST spr round 1 (radius: 25)
[00:06:31 -6966.840282] FAST spr round 2 (radius: 25)
[00:07:21 -6816.267114] FAST spr round 3 (radius: 25)
[00:08:10 -6801.153488] FAST spr round 4 (radius: 25)
[00:08:57 -6783.085867] FAST spr round 5 (radius: 25)
[00:09:44 -6781.944801] FAST spr round 6 (radius: 25)
[00:10:31 -6781.943887] Model parameter optimization (eps = 1.000000)
[00:10:40 -6773.169955] SLOW spr round 1 (radius: 5)
[00:11:29 -6769.592805] SLOW spr round 2 (radius: 5)
[00:12:18 -6768.423495] SLOW spr round 3 (radius: 5)
[00:13:07 -6767.851889] SLOW spr round 4 (radius: 5)
[00:13:55 -6767.807824] SLOW spr round 5 (radius: 10)
[00:14:46 -6767.590772] SLOW spr round 6 (radius: 5)
[00:15:37 -6767.589908] SLOW spr round 7 (radius: 10)
[00:16:28 -6765.368677] SLOW spr round 8 (radius: 5)
[00:17:19 -6765.353166] SLOW spr round 9 (radius: 10)
[00:18:10 -6765.351235] SLOW spr round 10 (radius: 15)
[00:19:09 -6752.721548] SLOW spr round 11 (radius: 5)
[00:20:03 -6750.676671] SLOW spr round 12 (radius: 5)
[00:20:51 -6750.673271] SLOW spr round 13 (radius: 10)
[00:21:41 -6749.041760] SLOW spr round 14 (radius: 5)
[00:22:32 -6749.024647] SLOW spr round 15 (radius: 10)
[00:23:22 -6748.880476] SLOW spr round 16 (radius: 5)
[00:24:12 -6748.869436] SLOW spr round 17 (radius: 10)
[00:25:03 -6748.869295] SLOW spr round 18 (radius: 15)
[00:26:00 -6747.820171] SLOW spr round 19 (radius: 5)
[00:26:53 -6747.814041] SLOW spr round 20 (radius: 10)
[00:27:43 -6747.813422] SLOW spr round 21 (radius: 15)
[00:28:41 -6747.277998] SLOW spr round 22 (radius: 5)
[00:29:34 -6747.277934] SLOW spr round 23 (radius: 10)
[00:30:25 -6747.277916] SLOW spr round 24 (radius: 15)
[00:31:24 -6747.277901] SLOW spr round 25 (radius: 20)
[00:32:35 -6738.876250] SLOW spr round 26 (radius: 5)
[00:33:30 -6733.551613] SLOW spr round 27 (radius: 5)
[00:34:22 -6733.546164] SLOW spr round 28 (radius: 10)
[00:35:14 -6731.691101] SLOW spr round 29 (radius: 5)
[00:36:08 -6729.036220] SLOW spr round 30 (radius: 5)
[00:36:57 -6728.981122] SLOW spr round 31 (radius: 10)
[00:37:50 -6728.981063] SLOW spr round 32 (radius: 15)
[00:38:49 -6726.314553] SLOW spr round 33 (radius: 5)
[00:39:42 -6726.314524] SLOW spr round 34 (radius: 10)
[00:40:33 -6652.933427] SLOW spr round 35 (radius: 5)
[00:41:25 -6646.963977] SLOW spr round 36 (radius: 5)
[00:42:12 -6646.963027] SLOW spr round 37 (radius: 10)
[00:43:03 -6646.962954] SLOW spr round 38 (radius: 15)
[00:44:00 -6644.790293] SLOW spr round 39 (radius: 5)
[00:44:54 -6644.157441] SLOW spr round 40 (radius: 5)
[00:45:43 -6644.156887] SLOW spr round 41 (radius: 10)
[00:46:33 -6638.150431] SLOW spr round 42 (radius: 5)
[00:47:24 -6638.150404] SLOW spr round 43 (radius: 10)
[00:48:15 -6634.435734] SLOW spr round 44 (radius: 5)
[00:49:06 -6634.435628] SLOW spr round 45 (radius: 10)
[00:49:56 -6634.435625] SLOW spr round 46 (radius: 15)
[00:50:55 -6631.984559] SLOW spr round 47 (radius: 5)
[00:51:49 -6631.866991] SLOW spr round 48 (radius: 5)
[00:52:37 -6631.865670] SLOW spr round 49 (radius: 10)
[00:53:27 -6631.865486] SLOW spr round 50 (radius: 15)
[00:54:26 -6631.865458] SLOW spr round 51 (radius: 20)
[00:55:37 -6620.401925] SLOW spr round 52 (radius: 5)
[00:56:31 -6619.728428] SLOW spr round 53 (radius: 5)
[00:57:21 -6619.727655] SLOW spr round 54 (radius: 10)
[00:58:12 -6619.727122] SLOW spr round 55 (radius: 15)
[00:59:10 -6619.727099] SLOW spr round 56 (radius: 20)
[01:00:22 -6619.492165] SLOW spr round 57 (radius: 5)
[01:01:16 -6619.492157] SLOW spr round 58 (radius: 10)
[01:02:08 -6619.492157] SLOW spr round 59 (radius: 15)
[01:03:06 -6619.492157] SLOW spr round 60 (radius: 20)
[01:04:17 -6619.492157] SLOW spr round 61 (radius: 25)
[01:05:38 -6618.758456] SLOW spr round 62 (radius: 5)
[01:06:32 -6617.756830] SLOW spr round 63 (radius: 5)
[01:07:23 -6617.755862] SLOW spr round 64 (radius: 10)
[01:08:13 -6617.755859] SLOW spr round 65 (radius: 15)
[01:09:11 -6617.755859] SLOW spr round 66 (radius: 20)
[01:10:22 -6617.755859] SLOW spr round 67 (radius: 25)
[01:11:43 -6617.755859] Model parameter optimization (eps = 0.100000)

[01:11:50] ML tree search #1, logLikelihood: -6615.968048

[01:11:50 -35559.933074] Initial branch length optimization
[01:11:51 -26992.037978] Model parameter optimization (eps = 10.000000)
[01:12:28 -26491.729971] AUTODETECT spr round 1 (radius: 5)
[01:13:13 -19353.952542] AUTODETECT spr round 2 (radius: 10)
[01:14:02 -15420.503676] AUTODETECT spr round 3 (radius: 15)
[01:14:55 -12457.846897] AUTODETECT spr round 4 (radius: 20)
[01:15:51 -11236.284371] AUTODETECT spr round 5 (radius: 25)
[01:16:51 -10386.162420] SPR radius for FAST iterations: 25 (autodetect)
[01:16:51 -10386.162420] Model parameter optimization (eps = 3.000000)
[01:17:05 -10157.282295] FAST spr round 1 (radius: 25)
[01:18:01 -7878.889655] FAST spr round 2 (radius: 25)
[01:18:50 -7300.717966] FAST spr round 3 (radius: 25)
[01:19:38 -7214.049898] FAST spr round 4 (radius: 25)
[01:20:25 -7212.601929] FAST spr round 5 (radius: 25)
[01:21:12 -7212.600485] Model parameter optimization (eps = 1.000000)
[01:21:21 -7202.040716] SLOW spr round 1 (radius: 5)
[01:22:10 -7178.161999] SLOW spr round 2 (radius: 5)
[01:22:59 -7157.525633] SLOW spr round 3 (radius: 5)
[01:23:49 -7157.050314] SLOW spr round 4 (radius: 5)
[01:24:37 -7157.050201] SLOW spr round 5 (radius: 10)
[01:25:29 -7057.353098] SLOW spr round 6 (radius: 5)
[01:26:21 -7000.659572] SLOW spr round 7 (radius: 5)
[01:27:10 -6997.587198] SLOW spr round 8 (radius: 5)
[01:27:59 -6995.653395] SLOW spr round 9 (radius: 5)
[01:28:49 -6994.183065] SLOW spr round 10 (radius: 5)
[01:29:38 -6993.501161] SLOW spr round 11 (radius: 5)
[01:30:26 -6993.500893] SLOW spr round 12 (radius: 10)
[01:31:16 -6991.769741] SLOW spr round 13 (radius: 5)
[01:32:09 -6990.825454] SLOW spr round 14 (radius: 5)
[01:32:56 -6990.824938] SLOW spr round 15 (radius: 10)
[01:33:46 -6990.824839] SLOW spr round 16 (radius: 15)
[01:34:48 -6888.425797] SLOW spr round 17 (radius: 5)
[01:35:42 -6824.757023] SLOW spr round 18 (radius: 5)
[01:36:32 -6814.267023] SLOW spr round 19 (radius: 5)
[01:37:21 -6813.242331] SLOW spr round 20 (radius: 5)
[01:38:08 -6813.095380] SLOW spr round 21 (radius: 5)
[01:38:55 -6813.095235] SLOW spr round 22 (radius: 10)
[01:39:46 -6720.386272] SLOW spr round 23 (radius: 5)
[01:40:38 -6709.618962] SLOW spr round 24 (radius: 5)
[01:41:26 -6709.585433] SLOW spr round 25 (radius: 10)
[01:42:16 -6709.508824] SLOW spr round 26 (radius: 15)
[01:43:15 -6663.748362] SLOW spr round 27 (radius: 5)
[01:44:08 -6659.827761] SLOW spr round 28 (radius: 5)
[01:44:58 -6659.676487] SLOW spr round 29 (radius: 5)
[01:45:45 -6659.635724] SLOW spr round 30 (radius: 10)
[01:46:34 -6659.462148] SLOW spr round 31 (radius: 5)
[01:47:24 -6659.462007] SLOW spr round 32 (radius: 10)
[01:48:13 -6659.462007] SLOW spr round 33 (radius: 15)
[01:49:11 -6659.462007] SLOW spr round 34 (radius: 20)
[01:50:27 -6574.115948] SLOW spr round 35 (radius: 5)
[01:51:19 -6531.575724] SLOW spr round 36 (radius: 5)
[01:52:08 -6530.200411] SLOW spr round 37 (radius: 5)
[01:52:55 -6530.200297] SLOW spr round 38 (radius: 10)
[01:53:44 -6530.200296] SLOW spr round 39 (radius: 15)
[01:54:42 -6482.881978] SLOW spr round 40 (radius: 5)
[01:55:34 -6482.881697] SLOW spr round 41 (radius: 10)
[01:56:23 -6480.143026] SLOW spr round 42 (radius: 5)
[01:57:13 -6480.142967] SLOW spr round 43 (radius: 10)
[01:58:02 -6480.142967] SLOW spr round 44 (radius: 15)
[01:58:59 -6480.142967] SLOW spr round 45 (radius: 20)
[02:00:15 -6471.513387] SLOW spr round 46 (radius: 5)
[02:01:07 -6471.512382] SLOW spr round 47 (radius: 10)
[02:01:56 -6471.512378] SLOW spr round 48 (radius: 15)
[02:02:54 -6471.512377] SLOW spr round 49 (radius: 20)
[02:04:08 -6471.512377] SLOW spr round 50 (radius: 25)
[02:05:29 -6468.308374] SLOW spr round 51 (radius: 5)
[02:06:22 -6468.078385] SLOW spr round 52 (radius: 5)
[02:07:10 -6468.078350] SLOW spr round 53 (radius: 10)
[02:07:59 -6468.078349] SLOW spr round 54 (radius: 15)
[02:08:58 -6466.380870] SLOW spr round 55 (radius: 5)
[02:09:50 -6466.380835] SLOW spr round 56 (radius: 10)
[02:10:40 -6466.380832] SLOW spr round 57 (radius: 15)
[02:11:38 -6465.850826] SLOW spr round 58 (radius: 5)
[02:12:30 -6465.850826] SLOW spr round 59 (radius: 10)
[02:13:20 -6465.850826] SLOW spr round 60 (radius: 15)
[02:14:18 -6465.850826] SLOW spr round 61 (radius: 20)
[02:15:33 -6465.499007] SLOW spr round 62 (radius: 5)
[02:16:25 -6465.498851] SLOW spr round 63 (radius: 10)
[02:17:16 -6465.290846] SLOW spr round 64 (radius: 5)
[02:18:06 -6465.290836] SLOW spr round 65 (radius: 10)
[02:18:56 -6465.290836] SLOW spr round 66 (radius: 15)
[02:19:54 -6465.290836] SLOW spr round 67 (radius: 20)
[02:21:09 -6465.290835] SLOW spr round 68 (radius: 25)
[02:22:30 -6465.290835] Model parameter optimization (eps = 0.100000)

[02:22:37] ML tree search #2, logLikelihood: -6462.339807

[02:22:37 -35840.666498] Initial branch length optimization
[02:22:38 -27324.385871] Model parameter optimization (eps = 10.000000)
[02:24:16 -26648.782035] AUTODETECT spr round 1 (radius: 5)
[02:24:59 -19557.035064] AUTODETECT spr round 2 (radius: 10)
[02:25:50 -14707.162201] AUTODETECT spr round 3 (radius: 15)
[02:26:46 -11034.101677] AUTODETECT spr round 4 (radius: 20)
[02:27:49 -9159.896742] AUTODETECT spr round 5 (radius: 25)
[02:28:54 -8611.973914] SPR radius for FAST iterations: 25 (autodetect)
[02:28:54 -8611.973914] Model parameter optimization (eps = 3.000000)
[02:29:19 -8348.193878] FAST spr round 1 (radius: 25)
[02:30:11 -6972.439454] FAST spr round 2 (radius: 25)
[02:31:03 -6710.041806] FAST spr round 3 (radius: 25)
[02:31:56 -6697.021518] FAST spr round 4 (radius: 25)
[02:32:49 -6686.789574] FAST spr round 5 (radius: 25)
[02:33:40 -6686.727027] Model parameter optimization (eps = 1.000000)
[02:33:49 -6674.144497] SLOW spr round 1 (radius: 5)
[02:34:39 -6670.791331] SLOW spr round 2 (radius: 5)
[02:35:28 -6670.789537] SLOW spr round 3 (radius: 10)
[02:36:20 -6659.586578] SLOW spr round 4 (radius: 5)
[02:37:10 -6659.586034] SLOW spr round 5 (radius: 10)
[02:38:02 -6659.585676] SLOW spr round 6 (radius: 15)
[02:39:00 -6606.808047] SLOW spr round 7 (radius: 5)
[02:39:55 -6555.098077] SLOW spr round 8 (radius: 5)
[02:40:45 -6545.380144] SLOW spr round 9 (radius: 5)
[02:41:34 -6545.379927] SLOW spr round 10 (radius: 10)
[02:42:24 -6545.368676] SLOW spr round 11 (radius: 15)
[02:43:24 -6532.003553] SLOW spr round 12 (radius: 5)
[02:44:18 -6481.478164] SLOW spr round 13 (radius: 5)
[02:45:09 -6475.975739] SLOW spr round 14 (radius: 5)
[02:45:59 -6474.117259] SLOW spr round 15 (radius: 5)
[02:46:48 -6473.649662] SLOW spr round 16 (radius: 5)
[02:47:36 -6473.649397] SLOW spr round 17 (radius: 10)
[02:48:28 -6473.649148] SLOW spr round 18 (radius: 15)
[02:49:25 -6472.460122] SLOW spr round 19 (radius: 5)
[02:50:19 -6470.992253] SLOW spr round 20 (radius: 5)
[02:51:09 -6470.992012] SLOW spr round 21 (radius: 10)
[02:52:00 -6468.470297] SLOW spr round 22 (radius: 5)
[02:52:51 -6468.217488] SLOW spr round 23 (radius: 5)
[02:53:40 -6468.217280] SLOW spr round 24 (radius: 10)
[02:54:31 -6468.217192] SLOW spr round 25 (radius: 15)
[02:55:28 -6468.160929] SLOW spr round 26 (radius: 20)
[02:56:41 -6445.923233] SLOW spr round 27 (radius: 5)
[02:57:36 -6431.042980] SLOW spr round 28 (radius: 5)
[02:58:26 -6429.684611] SLOW spr round 29 (radius: 5)
[02:59:15 -6429.683776] SLOW spr round 30 (radius: 10)
[03:00:05 -6429.683623] SLOW spr round 31 (radius: 15)
[03:01:01 -6429.075294] SLOW spr round 32 (radius: 5)
[03:01:55 -6428.743316] SLOW spr round 33 (radius: 5)
[03:02:44 -6428.743081] SLOW spr round 34 (radius: 10)
[03:03:34 -6428.743022] SLOW spr round 35 (radius: 15)
[03:04:31 -6428.742967] SLOW spr round 36 (radius: 20)
[03:05:44 -6426.381729] SLOW spr round 37 (radius: 5)
[03:06:38 -6426.267666] SLOW spr round 38 (radius: 5)
[03:07:27 -6426.267593] SLOW spr round 39 (radius: 10)
[03:08:18 -6426.267539] SLOW spr round 40 (radius: 15)
[03:09:14 -6426.267485] SLOW spr round 41 (radius: 20)
[03:10:27 -6425.680683] SLOW spr round 42 (radius: 5)
[03:11:20 -6425.680314] SLOW spr round 43 (radius: 10)
[03:12:11 -6425.224012] SLOW spr round 44 (radius: 5)
[03:13:01 -6425.224005] SLOW spr round 45 (radius: 10)
[03:13:51 -6425.224004] SLOW spr round 46 (radius: 15)
[03:14:47 -6425.224003] SLOW spr round 47 (radius: 20)
[03:15:59 -6425.224002] SLOW spr round 48 (radius: 25)
[03:17:23 -6423.666459] SLOW spr round 49 (radius: 5)
[03:18:16 -6423.665428] SLOW spr round 50 (radius: 10)
[03:19:07 -6423.665109] SLOW spr round 51 (radius: 15)
[03:20:03 -6423.665090] SLOW spr round 52 (radius: 20)
[03:21:16 -6416.699362] SLOW spr round 53 (radius: 5)
[03:22:09 -6416.316734] SLOW spr round 54 (radius: 5)
[03:22:58 -6415.189212] SLOW spr round 55 (radius: 5)
[03:23:45 -6415.188623] SLOW spr round 56 (radius: 10)
[03:24:35 -6414.663013] SLOW spr round 57 (radius: 5)
[03:25:24 -6414.546103] SLOW spr round 58 (radius: 5)
[03:26:11 -6414.543472] SLOW spr round 59 (radius: 10)
[03:27:01 -6414.543470] SLOW spr round 60 (radius: 15)
[03:27:56 -6414.543468] SLOW spr round 61 (radius: 20)
[03:29:07 -6414.543467] SLOW spr round 62 (radius: 25)
[03:30:29 -6394.206046] SLOW spr round 63 (radius: 5)
[03:31:21 -6394.206041] SLOW spr round 64 (radius: 10)
[03:32:12 -6394.206039] SLOW spr round 65 (radius: 15)
[03:33:07 -6394.206038] SLOW spr round 66 (radius: 20)
[03:34:18 -6394.206037] SLOW spr round 67 (radius: 25)
[03:35:39 -6394.206036] Model parameter optimization (eps = 0.100000)

[03:35:45] ML tree search #3, logLikelihood: -6392.509071

[03:35:45 -35922.931821] Initial branch length optimization
[03:35:45 -27194.762963] Model parameter optimization (eps = 10.000000)
[03:36:22 -26678.692655] AUTODETECT spr round 1 (radius: 5)
[03:37:06 -19406.250883] AUTODETECT spr round 2 (radius: 10)
[03:37:56 -13930.852845] AUTODETECT spr round 3 (radius: 15)
[03:38:49 -11583.273292] AUTODETECT spr round 4 (radius: 20)
[03:39:48 -9957.505172] AUTODETECT spr round 5 (radius: 25)
[03:40:51 -9501.748440] SPR radius for FAST iterations: 25 (autodetect)
[03:40:51 -9501.748440] Model parameter optimization (eps = 3.000000)
[03:41:13 -9302.551705] FAST spr round 1 (radius: 25)
[03:42:03 -8003.827643] FAST spr round 2 (radius: 25)
[03:42:52 -7915.522987] FAST spr round 3 (radius: 25)
[03:43:39 -7913.221339] FAST spr round 4 (radius: 25)
[03:44:25 -7912.863638] FAST spr round 5 (radius: 25)
[03:45:11 -7912.863619] Model parameter optimization (eps = 1.000000)
[03:45:19 -7904.924142] SLOW spr round 1 (radius: 5)
[03:46:08 -7812.346720] SLOW spr round 2 (radius: 5)
[03:46:58 -7810.486989] SLOW spr round 3 (radius: 5)
[03:47:47 -7810.486587] SLOW spr round 4 (radius: 10)
[03:48:38 -7803.979097] SLOW spr round 5 (radius: 5)
[03:49:31 -7802.900874] SLOW spr round 6 (radius: 5)
[03:50:21 -7802.900599] SLOW spr round 7 (radius: 10)
[03:51:11 -7801.996344] SLOW spr round 8 (radius: 5)
[03:52:05 -7801.538052] SLOW spr round 9 (radius: 5)
[03:52:55 -7801.536802] SLOW spr round 10 (radius: 10)
[03:53:45 -7801.536798] SLOW spr round 11 (radius: 15)
[03:54:43 -7764.493774] SLOW spr round 12 (radius: 5)
[03:55:38 -7751.509937] SLOW spr round 13 (radius: 5)
[03:56:29 -7751.508298] SLOW spr round 14 (radius: 10)
[03:57:19 -7750.878228] SLOW spr round 15 (radius: 5)
[03:58:11 -7750.877853] SLOW spr round 16 (radius: 10)
[03:59:02 -7748.839796] SLOW spr round 17 (radius: 5)
[03:59:55 -7748.839354] SLOW spr round 18 (radius: 10)
[04:00:46 -7748.839290] SLOW spr round 19 (radius: 15)
[04:01:44 -7747.681340] SLOW spr round 20 (radius: 5)
[04:02:38 -7747.681311] SLOW spr round 21 (radius: 10)
[04:03:30 -7747.471855] SLOW spr round 22 (radius: 5)
[04:04:23 -7747.471854] SLOW spr round 23 (radius: 10)
[04:05:14 -7747.471853] SLOW spr round 24 (radius: 15)
[04:06:12 -7747.067081] SLOW spr round 25 (radius: 5)
[04:07:07 -7746.497733] SLOW spr round 26 (radius: 5)
[04:07:57 -7746.497725] SLOW spr round 27 (radius: 10)
[04:08:48 -7746.497724] SLOW spr round 28 (radius: 15)
[04:09:46 -7746.007963] SLOW spr round 29 (radius: 5)
[04:10:41 -7745.395651] SLOW spr round 30 (radius: 5)
[04:11:31 -7745.394930] SLOW spr round 31 (radius: 10)
[04:12:22 -7745.157787] SLOW spr round 32 (radius: 5)
[04:13:14 -7745.154290] SLOW spr round 33 (radius: 10)
[04:14:05 -7745.152621] SLOW spr round 34 (radius: 15)
[04:15:02 -7743.027318] SLOW spr round 35 (radius: 5)
[04:15:56 -7742.331493] SLOW spr round 36 (radius: 5)
[04:16:46 -7742.330738] SLOW spr round 37 (radius: 10)
[04:17:36 -7742.330676] SLOW spr round 38 (radius: 15)
[04:18:33 -7742.330670] SLOW spr round 39 (radius: 20)
[04:19:43 -7734.936274] SLOW spr round 40 (radius: 5)
[04:20:37 -7734.895173] SLOW spr round 41 (radius: 10)
[04:21:29 -7734.580866] SLOW spr round 42 (radius: 5)
[04:22:21 -7734.580676] SLOW spr round 43 (radius: 10)
[04:23:11 -7734.580639] SLOW spr round 44 (radius: 15)
[04:24:08 -7734.580632] SLOW spr round 45 (radius: 20)
[04:25:18 -7734.580630] SLOW spr round 46 (radius: 25)
[04:26:29 -7729.293754] SLOW spr round 47 (radius: 5)
[04:27:22 -7729.293681] SLOW spr round 48 (radius: 10)
[04:28:15 -7728.266953] SLOW spr round 49 (radius: 5)
[04:29:06 -7728.266083] SLOW spr round 50 (radius: 10)
[04:29:56 -7727.926486] SLOW spr round 51 (radius: 5)
[04:30:47 -7727.925690] SLOW spr round 52 (radius: 10)
[04:31:38 -7727.925676] SLOW spr round 53 (radius: 15)
[04:32:35 -7727.864712] SLOW spr round 54 (radius: 20)
[04:33:46 -7727.864712] SLOW spr round 55 (radius: 25)
[04:34:59 -7727.864712] Model parameter optimization (eps = 0.100000)

[04:35:08] ML tree search #4, logLikelihood: -7723.868463

[04:35:08 -36111.730823] Initial branch length optimization
[04:35:08 -27362.318274] Model parameter optimization (eps = 10.000000)
[04:36:56 -26741.714013] AUTODETECT spr round 1 (radius: 5)
[04:37:39 -19251.345275] AUTODETECT spr round 2 (radius: 10)
[04:38:28 -14562.011138] AUTODETECT spr round 3 (radius: 15)
[04:39:22 -11536.950240] AUTODETECT spr round 4 (radius: 20)
[04:40:18 -10366.624898] AUTODETECT spr round 5 (radius: 25)
[04:41:17 -9624.082482] SPR radius for FAST iterations: 25 (autodetect)
[04:41:17 -9624.082482] Model parameter optimization (eps = 3.000000)
[04:41:38 -9412.555843] FAST spr round 1 (radius: 25)
[04:42:31 -7631.375595] FAST spr round 2 (radius: 25)
[04:43:20 -7281.644860] FAST spr round 3 (radius: 25)
[04:44:08 -7243.614188] FAST spr round 4 (radius: 25)
[04:44:55 -7222.046933] FAST spr round 5 (radius: 25)
[04:45:41 -7221.422114] FAST spr round 6 (radius: 25)
[04:46:27 -7221.421364] Model parameter optimization (eps = 1.000000)
[04:46:35 -7217.611327] SLOW spr round 1 (radius: 5)
[04:47:27 -7185.573520] SLOW spr round 2 (radius: 5)
[04:48:18 -7185.467184] SLOW spr round 3 (radius: 5)
[04:49:09 -7185.465829] SLOW spr round 4 (radius: 10)
[04:50:03 -7144.045129] SLOW spr round 5 (radius: 5)
[04:50:58 -7141.068650] SLOW spr round 6 (radius: 5)
[04:51:50 -7141.067690] SLOW spr round 7 (radius: 10)
[04:52:42 -7139.834167] SLOW spr round 8 (radius: 5)
[04:53:36 -7139.681078] SLOW spr round 9 (radius: 5)
[04:54:26 -7139.679679] SLOW spr round 10 (radius: 10)
[04:55:18 -7139.679273] SLOW spr round 11 (radius: 15)
[04:56:23 -7040.412226] SLOW spr round 12 (radius: 5)
[04:57:20 -7038.283615] SLOW spr round 13 (radius: 5)
[04:58:11 -7038.272791] SLOW spr round 14 (radius: 10)
[04:59:03 -7036.899281] SLOW spr round 15 (radius: 5)
[04:59:56 -7036.899166] SLOW spr round 16 (radius: 10)
[05:00:48 -7036.263903] SLOW spr round 17 (radius: 5)
[05:01:40 -7036.263741] SLOW spr round 18 (radius: 10)
[05:02:32 -7036.263624] SLOW spr round 19 (radius: 15)
[05:03:32 -7005.127132] SLOW spr round 20 (radius: 5)
[05:04:28 -7004.614686] SLOW spr round 21 (radius: 5)
[05:05:19 -7004.083706] SLOW spr round 22 (radius: 5)
[05:06:08 -7004.083316] SLOW spr round 23 (radius: 10)
[05:06:59 -7003.442304] SLOW spr round 24 (radius: 5)
[05:07:52 -7002.804832] SLOW spr round 25 (radius: 5)
[05:08:41 -7002.804125] SLOW spr round 26 (radius: 10)
[05:09:31 -7002.804033] SLOW spr round 27 (radius: 15)
[05:10:30 -7002.417915] SLOW spr round 28 (radius: 5)
[05:11:26 -6999.075736] SLOW spr round 29 (radius: 5)
[05:12:17 -6998.903004] SLOW spr round 30 (radius: 5)
[05:13:06 -6998.902693] SLOW spr round 31 (radius: 10)
[05:13:56 -6998.902632] SLOW spr round 32 (radius: 15)
[05:14:56 -6997.366830] SLOW spr round 33 (radius: 5)
[05:15:50 -6997.366335] SLOW spr round 34 (radius: 10)
[05:16:42 -6997.366268] SLOW spr round 35 (radius: 15)
[05:17:41 -6997.366212] SLOW spr round 36 (radius: 20)
[05:18:52 -6991.345397] SLOW spr round 37 (radius: 5)
[05:19:42 -6991.344717] SLOW spr round 38 (radius: 10)
[05:20:31 -6988.980169] SLOW spr round 39 (radius: 5)
[05:21:19 -6987.131077] SLOW spr round 40 (radius: 5)
[05:22:04 -6987.129586] SLOW spr round 41 (radius: 10)
[05:22:50 -6987.129425] SLOW spr round 42 (radius: 15)
[05:23:43 -6987.129365] SLOW spr round 43 (radius: 20)
[05:24:53 -6980.500568] SLOW spr round 44 (radius: 5)
[05:25:47 -6980.500558] SLOW spr round 45 (radius: 10)
[05:26:39 -6980.500557] SLOW spr round 46 (radius: 15)
[05:27:37 -6980.500542] SLOW spr round 47 (radius: 20)
[05:28:48 -6980.500542] SLOW spr round 48 (radius: 25)
[05:30:08 -6967.913274] SLOW spr round 49 (radius: 5)
[05:31:03 -6967.907120] SLOW spr round 50 (radius: 10)
[05:31:54 -6966.532247] SLOW spr round 51 (radius: 5)
[05:32:42 -6966.532232] SLOW spr round 52 (radius: 10)
[05:33:27 -6965.622467] SLOW spr round 53 (radius: 5)
[05:34:16 -6965.622445] SLOW spr round 54 (radius: 10)
[05:35:06 -6964.825241] SLOW spr round 55 (radius: 5)
[05:35:57 -6964.711729] SLOW spr round 56 (radius: 5)
[05:36:46 -6964.711713] SLOW spr round 57 (radius: 10)
[05:37:36 -6964.711712] SLOW spr round 58 (radius: 15)
[05:38:34 -6964.711712] SLOW spr round 59 (radius: 20)
[05:39:45 -6925.402781] SLOW spr round 60 (radius: 5)
[05:40:39 -6925.321312] SLOW spr round 61 (radius: 10)
[05:41:30 -6925.320973] SLOW spr round 62 (radius: 15)
[05:42:28 -6925.320968] SLOW spr round 63 (radius: 20)
[05:43:37 -6925.320968] SLOW spr round 64 (radius: 25)
[05:44:54 -6925.320968] Model parameter optimization (eps = 0.100000)

[05:45:03] ML tree search #5, logLikelihood: -6922.777500

[05:45:03 -36226.073486] Initial branch length optimization
[05:45:03 -27451.709408] Model parameter optimization (eps = 10.000000)
[05:47:26 -26675.807634] AUTODETECT spr round 1 (radius: 5)
[05:48:11 -19229.196173] AUTODETECT spr round 2 (radius: 10)
[05:49:01 -14793.221583] AUTODETECT spr round 3 (radius: 15)
[05:49:58 -11444.338514] AUTODETECT spr round 4 (radius: 20)
[05:50:56 -10373.692338] AUTODETECT spr round 5 (radius: 25)
[05:51:55 -10118.726441] SPR radius for FAST iterations: 25 (autodetect)
[05:51:55 -10118.726441] Model parameter optimization (eps = 3.000000)
[05:52:10 -10000.390796] FAST spr round 1 (radius: 25)
[05:53:05 -8631.139100] FAST spr round 2 (radius: 25)
[05:53:55 -8490.544783] FAST spr round 3 (radius: 25)
[05:54:44 -8439.546475] FAST spr round 4 (radius: 25)
[05:55:31 -8395.416371] FAST spr round 5 (radius: 25)
[05:56:19 -8394.706159] FAST spr round 6 (radius: 25)
[05:57:05 -8394.705904] Model parameter optimization (eps = 1.000000)
[05:57:13 -8388.656196] SLOW spr round 1 (radius: 5)
[05:58:01 -8385.773062] SLOW spr round 2 (radius: 5)
[05:58:51 -8384.764772] SLOW spr round 3 (radius: 5)
[05:59:39 -8384.764009] SLOW spr round 4 (radius: 10)
[06:00:30 -8362.219398] SLOW spr round 5 (radius: 5)
[06:01:24 -8353.710841] SLOW spr round 6 (radius: 5)
[06:02:14 -8351.262563] SLOW spr round 7 (radius: 5)
[06:03:03 -8351.259650] SLOW spr round 8 (radius: 10)
[06:03:54 -8351.259423] SLOW spr round 9 (radius: 15)
[06:04:53 -8347.465552] SLOW spr round 10 (radius: 5)
[06:05:48 -8344.414283] SLOW spr round 11 (radius: 5)
[06:06:37 -8344.412783] SLOW spr round 12 (radius: 10)
[06:07:27 -8344.283011] SLOW spr round 13 (radius: 5)
[06:08:18 -8344.282957] SLOW spr round 14 (radius: 10)
[06:09:09 -8344.197228] SLOW spr round 15 (radius: 15)
[06:10:07 -8344.197212] SLOW spr round 16 (radius: 20)
[06:11:15 -8341.839179] SLOW spr round 17 (radius: 5)
[06:12:07 -8341.837956] SLOW spr round 18 (radius: 10)
[06:12:57 -8341.813680] SLOW spr round 19 (radius: 15)
[06:13:52 -8341.685072] SLOW spr round 20 (radius: 5)
[06:14:43 -8341.665578] SLOW spr round 21 (radius: 10)
[06:15:32 -8341.462649] SLOW spr round 22 (radius: 5)
[06:16:21 -8341.462596] SLOW spr round 23 (radius: 10)
[06:17:09 -8341.462579] SLOW spr round 24 (radius: 15)
[06:18:06 -8340.832467] SLOW spr round 25 (radius: 5)
[06:18:56 -8340.828882] SLOW spr round 26 (radius: 10)
[06:19:45 -8340.048510] SLOW spr round 27 (radius: 5)
[06:20:33 -8340.048505] SLOW spr round 28 (radius: 10)
[06:21:21 -8340.048505] SLOW spr round 29 (radius: 15)
[06:22:16 -8340.048505] SLOW spr round 30 (radius: 20)
[06:23:20 -8340.048505] SLOW spr round 31 (radius: 25)
[06:24:28 -8339.593108] SLOW spr round 32 (radius: 5)
[06:25:20 -8339.592988] SLOW spr round 33 (radius: 10)
[06:26:10 -8339.592982] SLOW spr round 34 (radius: 15)
[06:27:06 -8337.839655] SLOW spr round 35 (radius: 5)
[06:27:58 -8337.640371] SLOW spr round 36 (radius: 5)
[06:28:45 -8337.637872] SLOW spr round 37 (radius: 10)
[06:29:33 -8337.636447] SLOW spr round 38 (radius: 15)
[06:30:28 -8337.635624] SLOW spr round 39 (radius: 20)
[06:31:32 -8337.635144] SLOW spr round 40 (radius: 25)
[06:32:40 -8337.634862] Model parameter optimization (eps = 0.100000)

[06:32:46] ML tree search #6, logLikelihood: -8336.622536

[06:32:46 -36233.982907] Initial branch length optimization
[06:32:46 -27262.844877] Model parameter optimization (eps = 10.000000)
[06:34:29 -26536.248857] AUTODETECT spr round 1 (radius: 5)
[06:35:11 -19776.084076] AUTODETECT spr round 2 (radius: 10)
[06:35:58 -15442.165517] AUTODETECT spr round 3 (radius: 15)
[06:36:48 -12537.254877] AUTODETECT spr round 4 (radius: 20)
[06:37:48 -10609.394656] AUTODETECT spr round 5 (radius: 25)
[06:38:46 -9607.392855] SPR radius for FAST iterations: 25 (autodetect)
[06:38:46 -9607.392855] Model parameter optimization (eps = 3.000000)
[06:39:02 -9409.487560] FAST spr round 1 (radius: 25)
[06:39:53 -7301.085249] FAST spr round 2 (radius: 25)
[06:40:42 -6978.996995] FAST spr round 3 (radius: 25)
[06:41:30 -6957.830400] FAST spr round 4 (radius: 25)
[06:42:17 -6957.474011] FAST spr round 5 (radius: 25)
[06:43:03 -6957.472460] Model parameter optimization (eps = 1.000000)
[06:43:13 -6951.840226] SLOW spr round 1 (radius: 5)
[06:43:59 -6905.801165] SLOW spr round 2 (radius: 5)
[06:44:44 -6905.386346] SLOW spr round 3 (radius: 5)
[06:45:28 -6905.385436] SLOW spr round 4 (radius: 10)
[06:46:14 -6868.424178] SLOW spr round 5 (radius: 5)
[06:47:02 -6865.556177] SLOW spr round 6 (radius: 5)
[06:47:47 -6865.555584] SLOW spr round 7 (radius: 10)
[06:48:33 -6865.226298] SLOW spr round 8 (radius: 5)
[06:49:20 -6865.117971] SLOW spr round 9 (radius: 5)
[06:50:06 -6865.115649] SLOW spr round 10 (radius: 10)
[06:50:52 -6865.115279] SLOW spr round 11 (radius: 15)
[06:51:46 -6847.318724] SLOW spr round 12 (radius: 5)
[06:52:37 -6840.561259] SLOW spr round 13 (radius: 5)
[06:53:24 -6840.560800] SLOW spr round 14 (radius: 10)
[06:54:12 -6839.962509] SLOW spr round 15 (radius: 5)
[06:55:00 -6839.962414] SLOW spr round 16 (radius: 10)
[06:55:48 -6839.804948] SLOW spr round 17 (radius: 5)
[06:56:37 -6839.804261] SLOW spr round 18 (radius: 10)
[06:57:24 -6839.804233] SLOW spr round 19 (radius: 15)
[06:58:15 -6837.831637] SLOW spr round 20 (radius: 5)
[06:59:03 -6837.831629] SLOW spr round 21 (radius: 10)
[06:59:49 -6836.306497] SLOW spr round 22 (radius: 5)
[07:00:35 -6836.167537] SLOW spr round 23 (radius: 5)
[07:01:19 -6836.167213] SLOW spr round 24 (radius: 10)
[07:02:04 -6836.167148] SLOW spr round 25 (radius: 15)
[07:02:56 -6836.036020] SLOW spr round 26 (radius: 5)
[07:03:43 -6836.036015] SLOW spr round 27 (radius: 10)
[07:04:29 -6836.036012] SLOW spr round 28 (radius: 15)
[07:05:21 -6836.036010] SLOW spr round 29 (radius: 20)
[07:06:24 -6825.179084] SLOW spr round 30 (radius: 5)
[07:07:14 -6822.859321] SLOW spr round 31 (radius: 5)
[07:07:59 -6822.858447] SLOW spr round 32 (radius: 10)
[07:08:45 -6822.858212] SLOW spr round 33 (radius: 15)
[07:09:36 -6791.276615] SLOW spr round 34 (radius: 5)
[07:10:24 -6791.264203] SLOW spr round 35 (radius: 10)
[07:11:10 -6791.261378] SLOW spr round 36 (radius: 15)
[07:12:01 -6791.260879] SLOW spr round 37 (radius: 20)
[07:13:03 -6789.013875] SLOW spr round 38 (radius: 5)
[07:13:53 -6766.075623] SLOW spr round 39 (radius: 5)
[07:14:39 -6763.780497] SLOW spr round 40 (radius: 5)
[07:15:23 -6763.662903] SLOW spr round 41 (radius: 5)
[07:16:07 -6763.661461] SLOW spr round 42 (radius: 10)
[07:16:52 -6763.661419] SLOW spr round 43 (radius: 15)
[07:17:42 -6763.661416] SLOW spr round 44 (radius: 20)
[07:18:43 -6763.661414] SLOW spr round 45 (radius: 25)
[07:19:55 -6747.758529] SLOW spr round 46 (radius: 5)
[07:20:45 -6715.560255] SLOW spr round 47 (radius: 5)
[07:21:31 -6704.266811] SLOW spr round 48 (radius: 5)
[07:22:15 -6703.423425] SLOW spr round 49 (radius: 5)
[07:22:58 -6703.204825] SLOW spr round 50 (radius: 5)
[07:23:42 -6703.204823] SLOW spr round 51 (radius: 10)
[07:24:27 -6694.302110] SLOW spr round 52 (radius: 5)
[07:25:14 -6686.145216] SLOW spr round 53 (radius: 5)
[07:25:58 -6678.259684] SLOW spr round 54 (radius: 5)
[07:26:42 -6678.259682] SLOW spr round 55 (radius: 10)
[07:27:29 -6678.259680] SLOW spr round 56 (radius: 15)
[07:28:22 -6672.578592] SLOW spr round 57 (radius: 5)
[07:29:12 -6672.578590] SLOW spr round 58 (radius: 10)
[07:29:58 -6672.578588] SLOW spr round 59 (radius: 15)
[07:30:50 -6672.578586] SLOW spr round 60 (radius: 20)
[07:31:50 -6668.411003] SLOW spr round 61 (radius: 5)
[07:32:40 -6667.074143] SLOW spr round 62 (radius: 5)
[07:33:25 -6667.074136] SLOW spr round 63 (radius: 10)
[07:34:11 -6667.074134] SLOW spr round 64 (radius: 15)
[07:35:01 -6667.074132] SLOW spr round 65 (radius: 20)
[07:36:03 -6667.074130] SLOW spr round 66 (radius: 25)
[07:37:12 -6665.469159] SLOW spr round 67 (radius: 5)
[07:38:03 -6665.469010] SLOW spr round 68 (radius: 10)
[07:38:49 -6665.469000] SLOW spr round 69 (radius: 15)
[07:39:39 -6665.468998] SLOW spr round 70 (radius: 20)
[07:40:39 -6665.468996] SLOW spr round 71 (radius: 25)
[07:41:50 -6665.468994] Model parameter optimization (eps = 0.100000)

[07:41:56] ML tree search #7, logLikelihood: -6663.649092

[07:41:56 -36220.291157] Initial branch length optimization
[07:41:57 -27574.594169] Model parameter optimization (eps = 10.000000)
[07:43:42 -26999.890585] AUTODETECT spr round 1 (radius: 5)
[07:44:23 -19340.863860] AUTODETECT spr round 2 (radius: 10)
[07:45:10 -14331.185524] AUTODETECT spr round 3 (radius: 15)
[07:45:59 -11873.885070] AUTODETECT spr round 4 (radius: 20)
[07:46:54 -9837.444959] AUTODETECT spr round 5 (radius: 25)
[07:47:56 -8705.436783] SPR radius for FAST iterations: 25 (autodetect)
[07:47:56 -8705.436783] Model parameter optimization (eps = 3.000000)
[07:48:10 -8503.794214] FAST spr round 1 (radius: 25)
[07:49:02 -7031.362886] FAST spr round 2 (radius: 25)
[07:49:52 -6832.006279] FAST spr round 3 (radius: 25)
[07:50:41 -6758.905831] FAST spr round 4 (radius: 25)
[07:51:30 -6735.420659] FAST spr round 5 (radius: 25)
[07:52:16 -6677.687424] FAST spr round 6 (radius: 25)
[07:53:01 -6676.943464] FAST spr round 7 (radius: 25)
[07:53:47 -6676.942423] Model parameter optimization (eps = 1.000000)
[07:53:53 -6671.842030] SLOW spr round 1 (radius: 5)
[07:54:41 -6615.297440] SLOW spr round 2 (radius: 5)
[07:55:28 -6609.633663] SLOW spr round 3 (radius: 5)
[07:56:15 -6609.452683] SLOW spr round 4 (radius: 5)
[07:57:00 -6609.233930] SLOW spr round 5 (radius: 5)
[07:57:45 -6609.233183] SLOW spr round 6 (radius: 10)
[07:58:31 -6581.957094] SLOW spr round 7 (radius: 5)
[07:59:18 -6581.520914] SLOW spr round 8 (radius: 5)
[08:00:03 -6581.520163] SLOW spr round 9 (radius: 10)
[08:00:49 -6581.520112] SLOW spr round 10 (radius: 15)
[08:01:42 -6571.776013] SLOW spr round 11 (radius: 5)
[08:02:32 -6569.676843] SLOW spr round 12 (radius: 5)
[08:03:17 -6569.675214] SLOW spr round 13 (radius: 10)
[08:04:04 -6566.787589] SLOW spr round 14 (radius: 5)
[08:04:51 -6564.896180] SLOW spr round 15 (radius: 5)
[08:05:36 -6564.896015] SLOW spr round 16 (radius: 10)
[08:06:22 -6564.895986] SLOW spr round 17 (radius: 15)
[08:07:16 -6543.139529] SLOW spr round 18 (radius: 5)
[08:08:06 -6534.009192] SLOW spr round 19 (radius: 5)
[08:08:52 -6532.694458] SLOW spr round 20 (radius: 5)
[08:09:36 -6532.694412] SLOW spr round 21 (radius: 10)
[08:10:22 -6532.694400] SLOW spr round 22 (radius: 15)
[08:11:16 -6525.289067] SLOW spr round 23 (radius: 5)
[08:12:05 -6525.287333] SLOW spr round 24 (radius: 10)
[08:12:54 -6522.780889] SLOW spr round 25 (radius: 5)
[08:13:45 -6520.411680] SLOW spr round 26 (radius: 5)
[08:14:31 -6520.411664] SLOW spr round 27 (radius: 10)
[08:15:20 -6520.411652] SLOW spr round 28 (radius: 15)
[08:16:14 -6520.411631] SLOW spr round 29 (radius: 20)
[08:17:22 -6514.360372] SLOW spr round 30 (radius: 5)
[08:18:15 -6511.791474] SLOW spr round 31 (radius: 5)
[08:19:04 -6511.401517] SLOW spr round 32 (radius: 5)
[08:19:50 -6511.399945] SLOW spr round 33 (radius: 10)
[08:20:39 -6511.399888] SLOW spr round 34 (radius: 15)
[08:21:33 -6511.399883] SLOW spr round 35 (radius: 20)
[08:22:41 -6511.399882] SLOW spr round 36 (radius: 25)
[08:23:51 -6504.280650] SLOW spr round 37 (radius: 5)
[08:24:44 -6504.096731] SLOW spr round 38 (radius: 5)
[08:25:32 -6504.095424] SLOW spr round 39 (radius: 10)
[08:26:20 -6504.095131] SLOW spr round 40 (radius: 15)
[08:27:14 -6504.095082] SLOW spr round 41 (radius: 20)
[08:28:21 -6504.095073] SLOW spr round 42 (radius: 25)
[08:29:28 -6504.095071] Model parameter optimization (eps = 0.100000)

[08:29:35] ML tree search #8, logLikelihood: -6502.424900

[08:29:35 -35782.156686] Initial branch length optimization
[08:29:35 -27200.576960] Model parameter optimization (eps = 10.000000)
[08:31:45 -26449.120343] AUTODETECT spr round 1 (radius: 5)
[08:32:26 -19620.338317] AUTODETECT spr round 2 (radius: 10)
[08:33:14 -14472.000070] AUTODETECT spr round 3 (radius: 15)
[08:34:07 -11410.607655] AUTODETECT spr round 4 (radius: 20)
[08:35:00 -10045.042931] AUTODETECT spr round 5 (radius: 25)
[08:35:59 -9042.814827] SPR radius for FAST iterations: 25 (autodetect)
[08:35:59 -9042.814827] Model parameter optimization (eps = 3.000000)
[08:36:14 -8912.903960] FAST spr round 1 (radius: 25)
[08:37:06 -7691.794598] FAST spr round 2 (radius: 25)
[08:37:53 -7394.379482] FAST spr round 3 (radius: 25)
[08:38:40 -7363.605433] FAST spr round 4 (radius: 25)
[08:39:28 -7279.293171] FAST spr round 5 (radius: 25)
[08:40:14 -7266.854588] FAST spr round 6 (radius: 25)
[08:41:00 -7265.434469] FAST spr round 7 (radius: 25)
[08:41:46 -7265.434315] Model parameter optimization (eps = 1.000000)
[08:41:53 -7259.060635] SLOW spr round 1 (radius: 5)
[08:42:43 -7213.205367] SLOW spr round 2 (radius: 5)
[08:43:33 -7211.407955] SLOW spr round 3 (radius: 5)
[08:44:22 -7211.407945] SLOW spr round 4 (radius: 10)
[08:45:14 -7191.299906] SLOW spr round 5 (radius: 5)
[08:46:07 -7187.554423] SLOW spr round 6 (radius: 5)
[08:46:56 -7187.548813] SLOW spr round 7 (radius: 10)
[08:47:48 -7187.548151] SLOW spr round 8 (radius: 15)
[08:48:49 -7172.945475] SLOW spr round 9 (radius: 5)
[08:49:45 -7172.945355] SLOW spr round 10 (radius: 10)
[08:50:38 -7171.898285] SLOW spr round 11 (radius: 5)
[08:51:30 -7171.898269] SLOW spr round 12 (radius: 10)
[08:52:21 -7171.898269] SLOW spr round 13 (radius: 15)
[08:53:22 -7165.595917] SLOW spr round 14 (radius: 5)
[08:54:18 -7162.479768] SLOW spr round 15 (radius: 5)
[08:55:09 -7162.478027] SLOW spr round 16 (radius: 10)
[08:56:00 -7162.477967] SLOW spr round 17 (radius: 15)
[08:56:59 -7138.300248] SLOW spr round 18 (radius: 5)
[08:57:52 -7138.299608] SLOW spr round 19 (radius: 10)
[08:58:44 -7138.156085] SLOW spr round 20 (radius: 5)
[08:59:34 -7138.154967] SLOW spr round 21 (radius: 10)
[09:00:25 -7138.154952] SLOW spr round 22 (radius: 15)
[09:01:22 -7137.806779] SLOW spr round 23 (radius: 5)
[09:02:15 -7137.806687] SLOW spr round 24 (radius: 10)
[09:03:06 -7137.806683] SLOW spr round 25 (radius: 15)
[09:04:05 -7137.806683] SLOW spr round 26 (radius: 20)
[09:05:20 -6936.314271] SLOW spr round 27 (radius: 5)
[09:06:13 -6881.048461] SLOW spr round 28 (radius: 5)
[09:07:00 -6870.969168] SLOW spr round 29 (radius: 5)
[09:07:46 -6870.880749] SLOW spr round 30 (radius: 10)
[09:08:33 -6865.746256] SLOW spr round 31 (radius: 5)
[09:09:22 -6856.673193] SLOW spr round 32 (radius: 5)
[09:10:06 -6856.670825] SLOW spr round 33 (radius: 10)
[09:10:53 -6856.670783] SLOW spr round 34 (radius: 15)
[09:11:47 -6761.666690] SLOW spr round 35 (radius: 5)
[09:12:37 -6721.721181] SLOW spr round 36 (radius: 5)
[09:13:23 -6719.480467] SLOW spr round 37 (radius: 5)
[09:14:08 -6719.480172] SLOW spr round 38 (radius: 10)
[09:14:55 -6682.463187] SLOW spr round 39 (radius: 5)
[09:15:42 -6681.723131] SLOW spr round 40 (radius: 5)
[09:16:27 -6679.648806] SLOW spr round 41 (radius: 5)
[09:17:12 -6679.631467] SLOW spr round 42 (radius: 10)
[09:17:58 -6678.849019] SLOW spr round 43 (radius: 5)
[09:18:45 -6678.848581] SLOW spr round 44 (radius: 10)
[09:19:32 -6678.848540] SLOW spr round 45 (radius: 15)
[09:20:25 -6676.121098] SLOW spr round 46 (radius: 5)
[09:21:14 -6673.823228] SLOW spr round 47 (radius: 5)
[09:22:00 -6673.752520] SLOW spr round 48 (radius: 10)
[09:22:46 -6673.752037] SLOW spr round 49 (radius: 15)
[09:23:39 -6669.860139] SLOW spr round 50 (radius: 5)
[09:24:27 -6669.625050] SLOW spr round 51 (radius: 5)
[09:25:13 -6667.994089] SLOW spr round 52 (radius: 5)
[09:25:57 -6667.994064] SLOW spr round 53 (radius: 10)
[09:26:44 -6667.994059] SLOW spr round 54 (radius: 15)
[09:27:36 -6667.994058] SLOW spr round 55 (radius: 20)
[09:28:37 -6667.994058] SLOW spr round 56 (radius: 25)
[09:29:49 -6633.668820] SLOW spr round 57 (radius: 5)
[09:30:39 -6629.883721] SLOW spr round 58 (radius: 5)
[09:31:25 -6629.772634] SLOW spr round 59 (radius: 5)
[09:32:09 -6629.772398] SLOW spr round 60 (radius: 10)
[09:32:55 -6629.772353] SLOW spr round 61 (radius: 15)
[09:33:48 -6621.881120] SLOW spr round 62 (radius: 5)
[09:34:38 -6615.062503] SLOW spr round 63 (radius: 5)
[09:35:23 -6611.590364] SLOW spr round 64 (radius: 5)
[09:36:07 -6611.590327] SLOW spr round 65 (radius: 10)
[09:36:54 -6609.950383] SLOW spr round 66 (radius: 5)
[09:37:40 -6609.950369] SLOW spr round 67 (radius: 10)
[09:38:26 -6609.950354] SLOW spr round 68 (radius: 15)
[09:39:18 -6609.950339] SLOW spr round 69 (radius: 20)
[09:40:24 -6607.783170] SLOW spr round 70 (radius: 5)
[09:41:13 -6607.782933] SLOW spr round 71 (radius: 10)
[09:42:00 -6607.782917] SLOW spr round 72 (radius: 15)
[09:42:51 -6607.782902] SLOW spr round 73 (radius: 20)
[09:43:56 -6560.033491] SLOW spr round 74 (radius: 5)
[09:44:46 -6542.945228] SLOW spr round 75 (radius: 5)
[09:45:32 -6536.280054] SLOW spr round 76 (radius: 5)
[09:46:16 -6536.046647] SLOW spr round 77 (radius: 5)
[09:46:59 -6536.046632] SLOW spr round 78 (radius: 10)
[09:47:45 -6535.762728] SLOW spr round 79 (radius: 5)
[09:48:31 -6535.762711] SLOW spr round 80 (radius: 10)
[09:49:20 -6535.762697] SLOW spr round 81 (radius: 15)
[09:50:13 -6535.762683] SLOW spr round 82 (radius: 20)
[09:51:19 -6535.762669] SLOW spr round 83 (radius: 25)
[09:52:32 -6534.813786] SLOW spr round 84 (radius: 5)
[09:53:23 -6534.808770] SLOW spr round 85 (radius: 10)
[09:54:12 -6534.808740] SLOW spr round 86 (radius: 15)
[09:55:05 -6532.955480] SLOW spr round 87 (radius: 5)
[09:55:55 -6532.955233] SLOW spr round 88 (radius: 10)
[09:56:44 -6532.955092] SLOW spr round 89 (radius: 15)
[09:57:37 -6532.954997] SLOW spr round 90 (radius: 20)
[09:58:43 -6532.886983] SLOW spr round 91 (radius: 25)
[09:59:56 -6532.886863] Model parameter optimization (eps = 0.100000)

[10:00:03] ML tree search #9, logLikelihood: -6529.575360

[10:00:03 -36157.501673] Initial branch length optimization
[10:00:04 -27412.380858] Model parameter optimization (eps = 10.000000)
[10:01:17 -26840.214894] AUTODETECT spr round 1 (radius: 5)
[10:02:00 -19189.020968] AUTODETECT spr round 2 (radius: 10)
[10:02:47 -14734.459420] AUTODETECT spr round 3 (radius: 15)
[10:03:39 -11838.391825] AUTODETECT spr round 4 (radius: 20)
[10:04:33 -10265.400503] AUTODETECT spr round 5 (radius: 25)
[10:05:33 -9424.079925] SPR radius for FAST iterations: 25 (autodetect)
[10:05:33 -9424.079925] Model parameter optimization (eps = 3.000000)
[10:05:46 -9240.755409] FAST spr round 1 (radius: 25)
[10:06:36 -7433.637535] FAST spr round 2 (radius: 25)
[10:07:24 -7243.155440] FAST spr round 3 (radius: 25)
[10:08:12 -7181.473585] FAST spr round 4 (radius: 25)
[10:08:58 -7124.435105] FAST spr round 5 (radius: 25)
[10:09:45 -7113.431384] FAST spr round 6 (radius: 25)
[10:10:30 -7113.429354] Model parameter optimization (eps = 1.000000)
[10:10:40 -7102.594366] SLOW spr round 1 (radius: 5)
[10:11:28 -7027.732767] SLOW spr round 2 (radius: 5)
[10:12:16 -7003.713692] SLOW spr round 3 (radius: 5)
[10:13:02 -6969.893310] SLOW spr round 4 (radius: 5)
[10:13:49 -6963.238277] SLOW spr round 5 (radius: 5)
[10:14:35 -6963.238043] SLOW spr round 6 (radius: 10)
[10:15:23 -6959.448300] SLOW spr round 7 (radius: 5)
[10:16:14 -6957.592646] SLOW spr round 8 (radius: 5)
[10:17:01 -6957.253669] SLOW spr round 9 (radius: 5)
[10:17:47 -6957.253544] SLOW spr round 10 (radius: 10)
[10:18:35 -6953.800000] SLOW spr round 11 (radius: 5)
[10:19:24 -6953.185804] SLOW spr round 12 (radius: 5)
[10:20:11 -6953.047218] SLOW spr round 13 (radius: 5)
[10:20:57 -6953.047074] SLOW spr round 14 (radius: 10)
[10:21:45 -6952.771475] SLOW spr round 15 (radius: 5)
[10:22:34 -6952.771475] SLOW spr round 16 (radius: 10)
[10:23:23 -6949.353950] SLOW spr round 17 (radius: 5)
[10:24:13 -6948.674978] SLOW spr round 18 (radius: 5)
[10:24:59 -6948.674914] SLOW spr round 19 (radius: 10)
[10:25:47 -6948.674912] SLOW spr round 20 (radius: 15)
[10:26:42 -6936.721353] SLOW spr round 21 (radius: 5)
[10:27:35 -6934.199887] SLOW spr round 22 (radius: 5)
[10:28:23 -6933.988202] SLOW spr round 23 (radius: 5)
[10:29:09 -6933.987853] SLOW spr round 24 (radius: 10)
[10:29:57 -6933.987785] SLOW spr round 25 (radius: 15)
[10:30:52 -6927.662507] SLOW spr round 26 (radius: 5)
[10:31:45 -6924.872606] SLOW spr round 27 (radius: 5)
[10:32:32 -6924.872544] SLOW spr round 28 (radius: 10)
[10:33:20 -6924.872511] SLOW spr round 29 (radius: 15)
[10:34:15 -6924.872509] SLOW spr round 30 (radius: 20)
[10:35:23 -6918.485192] SLOW spr round 31 (radius: 5)
[10:36:15 -6917.679276] SLOW spr round 32 (radius: 5)
[10:37:04 -6915.044946] SLOW spr round 33 (radius: 5)
[10:37:50 -6914.581834] SLOW spr round 34 (radius: 5)
[10:38:37 -6914.581810] SLOW spr round 35 (radius: 10)
[10:39:24 -6914.581809] SLOW spr round 36 (radius: 15)
[10:40:20 -6914.277798] SLOW spr round 37 (radius: 5)
[10:41:11 -6914.277798] SLOW spr round 38 (radius: 10)
[10:41:59 -6914.116261] SLOW spr round 39 (radius: 5)
[10:42:48 -6914.116217] SLOW spr round 40 (radius: 10)
[10:43:36 -6914.116211] SLOW spr round 41 (radius: 15)
[10:44:31 -6914.116211] SLOW spr round 42 (radius: 20)
[10:45:39 -6914.116211] SLOW spr round 43 (radius: 25)
[10:46:49 -6912.608610] SLOW spr round 44 (radius: 5)
[10:47:41 -6912.315852] SLOW spr round 45 (radius: 5)
[10:48:29 -6912.315147] SLOW spr round 46 (radius: 10)
[10:49:17 -6912.315137] SLOW spr round 47 (radius: 15)
[10:50:11 -6912.315137] SLOW spr round 48 (radius: 20)
[10:51:18 -6912.065277] SLOW spr round 49 (radius: 5)
[10:52:09 -6912.065257] SLOW spr round 50 (radius: 10)
[10:52:58 -6912.065257] SLOW spr round 51 (radius: 15)
[10:53:52 -6912.065257] SLOW spr round 52 (radius: 20)
[10:54:59 -6912.065257] SLOW spr round 53 (radius: 25)
[10:56:07 -6912.065257] Model parameter optimization (eps = 0.100000)

[10:56:14] ML tree search #10, logLikelihood: -6910.186677

[10:56:15 -36134.612806] Initial branch length optimization
[10:56:15 -27545.943427] Model parameter optimization (eps = 10.000000)
[10:56:47 -27073.525904] AUTODETECT spr round 1 (radius: 5)
[10:57:31 -19426.259143] AUTODETECT spr round 2 (radius: 10)
[10:58:19 -14298.753417] AUTODETECT spr round 3 (radius: 15)
[10:59:10 -11942.299924] AUTODETECT spr round 4 (radius: 20)
[11:00:12 -10593.922809] AUTODETECT spr round 5 (radius: 25)
[11:01:16 -9714.505086] SPR radius for FAST iterations: 25 (autodetect)
[11:01:16 -9714.505086] Model parameter optimization (eps = 3.000000)
[11:01:39 -9399.325521] FAST spr round 1 (radius: 25)
[11:02:33 -7326.066348] FAST spr round 2 (radius: 25)
[11:03:20 -7152.979709] FAST spr round 3 (radius: 25)
[11:04:07 -7073.011309] FAST spr round 4 (radius: 25)
[11:04:52 -7068.146371] FAST spr round 5 (radius: 25)
[11:05:37 -7066.173388] FAST spr round 6 (radius: 25)
[11:06:21 -7066.173164] Model parameter optimization (eps = 1.000000)
[11:06:27 -7039.583331] SLOW spr round 1 (radius: 5)
[11:07:19 -7035.686319] SLOW spr round 2 (radius: 5)
[11:08:10 -7035.614836] SLOW spr round 3 (radius: 10)
[11:09:03 -7021.636946] SLOW spr round 4 (radius: 5)
[11:09:59 -7016.080033] SLOW spr round 5 (radius: 5)
[11:10:51 -7016.078620] SLOW spr round 6 (radius: 10)
[11:11:44 -7016.078322] SLOW spr round 7 (radius: 15)
[11:12:53 -6943.755384] SLOW spr round 8 (radius: 5)
[11:13:53 -6937.091947] SLOW spr round 9 (radius: 5)
[11:14:45 -6937.088987] SLOW spr round 10 (radius: 10)
[11:15:38 -6937.088198] SLOW spr round 11 (radius: 15)
[11:16:43 -6933.633530] SLOW spr round 12 (radius: 5)
[11:17:40 -6933.633329] SLOW spr round 13 (radius: 10)
[11:18:34 -6933.633312] SLOW spr round 14 (radius: 15)
[11:19:36 -6933.633310] SLOW spr round 15 (radius: 20)
[11:20:59 -6916.813124] SLOW spr round 16 (radius: 5)
[11:21:56 -6880.954808] SLOW spr round 17 (radius: 5)
[11:22:46 -6875.131150] SLOW spr round 18 (radius: 5)
[11:23:34 -6874.689178] SLOW spr round 19 (radius: 5)
[11:24:21 -6874.290696] SLOW spr round 20 (radius: 5)
[11:25:09 -6874.290696] SLOW spr round 21 (radius: 10)
[11:25:59 -6857.173741] SLOW spr round 22 (radius: 5)
[11:26:51 -6852.623401] SLOW spr round 23 (radius: 5)
[11:27:39 -6852.623271] SLOW spr round 24 (radius: 10)
[11:28:29 -6846.949293] SLOW spr round 25 (radius: 5)
[11:29:19 -6846.949293] SLOW spr round 26 (radius: 10)
[11:30:10 -6846.949293] SLOW spr round 27 (radius: 15)
[11:31:08 -6846.927766] SLOW spr round 28 (radius: 20)
[11:32:27 -6846.927765] SLOW spr round 29 (radius: 25)
[11:33:50 -6818.488026] SLOW spr round 30 (radius: 5)
[11:34:45 -6816.688850] SLOW spr round 31 (radius: 5)
[11:35:33 -6816.688840] SLOW spr round 32 (radius: 10)
[11:36:23 -6816.688840] SLOW spr round 33 (radius: 15)
[11:37:20 -6815.377187] SLOW spr round 34 (radius: 5)
[11:38:14 -6815.088569] SLOW spr round 35 (radius: 5)
[11:39:01 -6815.086093] SLOW spr round 36 (radius: 10)
[11:39:51 -6813.340414] SLOW spr round 37 (radius: 5)
[11:40:40 -6812.932668] SLOW spr round 38 (radius: 5)
[11:41:27 -6812.924704] SLOW spr round 39 (radius: 10)
[11:42:16 -6812.780143] SLOW spr round 40 (radius: 5)
[11:43:06 -6812.779443] SLOW spr round 41 (radius: 10)
[11:43:55 -6812.779434] SLOW spr round 42 (radius: 15)
[11:44:51 -6810.518428] SLOW spr round 43 (radius: 5)
[11:45:44 -6808.939315] SLOW spr round 44 (radius: 5)
[11:46:33 -6808.935799] SLOW spr round 45 (radius: 10)
[11:47:21 -6808.935408] SLOW spr round 46 (radius: 15)
[11:48:17 -6808.935367] SLOW spr round 47 (radius: 20)
[11:49:31 -6806.545598] SLOW spr round 48 (radius: 5)
[11:50:24 -6806.539298] SLOW spr round 49 (radius: 10)
[11:51:13 -6806.537755] SLOW spr round 50 (radius: 15)
[11:52:09 -6806.537375] SLOW spr round 51 (radius: 20)
[11:53:23 -6806.537284] SLOW spr round 52 (radius: 25)
[11:54:46 -6806.537262] Model parameter optimization (eps = 0.100000)

[11:54:53] ML tree search #11, logLikelihood: -6806.186179

[11:54:53 -35868.759592] Initial branch length optimization
[11:54:53 -27369.604487] Model parameter optimization (eps = 10.000000)
[11:56:04 -26753.866952] AUTODETECT spr round 1 (radius: 5)
[11:56:45 -19476.691974] AUTODETECT spr round 2 (radius: 10)
[11:57:32 -14803.432687] AUTODETECT spr round 3 (radius: 15)
[11:58:23 -12016.522052] AUTODETECT spr round 4 (radius: 20)
[11:59:21 -9725.087785] AUTODETECT spr round 5 (radius: 25)
[12:00:21 -8634.142068] SPR radius for FAST iterations: 25 (autodetect)
[12:00:21 -8634.142068] Model parameter optimization (eps = 3.000000)
[12:00:34 -8470.980017] FAST spr round 1 (radius: 25)
[12:01:24 -7021.549773] FAST spr round 2 (radius: 25)
[12:02:11 -6945.971674] FAST spr round 3 (radius: 25)
[12:02:57 -6924.719081] FAST spr round 4 (radius: 25)
[12:03:42 -6924.704873] Model parameter optimization (eps = 1.000000)
[12:03:49 -6913.909316] SLOW spr round 1 (radius: 5)
[12:04:36 -6825.675571] SLOW spr round 2 (radius: 5)
[12:05:23 -6825.671620] SLOW spr round 3 (radius: 10)
[12:06:12 -6821.571677] SLOW spr round 4 (radius: 5)
[12:07:02 -6810.634502] SLOW spr round 5 (radius: 5)
[12:07:49 -6809.925296] SLOW spr round 6 (radius: 5)
[12:08:36 -6809.924395] SLOW spr round 7 (radius: 10)
[12:09:24 -6802.486269] SLOW spr round 8 (radius: 5)
[12:10:13 -6802.486005] SLOW spr round 9 (radius: 10)
[12:11:02 -6801.020294] SLOW spr round 10 (radius: 5)
[12:11:50 -6801.019694] SLOW spr round 11 (radius: 10)
[12:12:39 -6801.018036] SLOW spr round 12 (radius: 15)
[12:13:35 -6790.190094] SLOW spr round 13 (radius: 5)
[12:14:27 -6779.376540] SLOW spr round 14 (radius: 5)
[12:15:14 -6779.375338] SLOW spr round 15 (radius: 10)
[12:16:03 -6776.153060] SLOW spr round 16 (radius: 5)
[12:16:51 -6776.052644] SLOW spr round 17 (radius: 5)
[12:17:38 -6775.888010] SLOW spr round 18 (radius: 5)
[12:18:23 -6775.887852] SLOW spr round 19 (radius: 10)
[12:19:11 -6775.887847] SLOW spr round 20 (radius: 15)
[12:20:07 -6730.714020] SLOW spr round 21 (radius: 5)
[12:20:57 -6707.054715] SLOW spr round 22 (radius: 5)
[12:21:44 -6706.239751] SLOW spr round 23 (radius: 5)
[12:22:29 -6706.239281] SLOW spr round 24 (radius: 10)
[12:23:16 -6706.239218] SLOW spr round 25 (radius: 15)
[12:24:12 -6698.757312] SLOW spr round 26 (radius: 5)
[12:25:03 -6695.730288] SLOW spr round 27 (radius: 5)
[12:25:50 -6695.437822] SLOW spr round 28 (radius: 5)
[12:26:36 -6695.437141] SLOW spr round 29 (radius: 10)
[12:27:23 -6695.437092] SLOW spr round 30 (radius: 15)
[12:28:19 -6694.654139] SLOW spr round 31 (radius: 5)
[12:29:08 -6694.654068] SLOW spr round 32 (radius: 10)
[12:29:57 -6694.654058] SLOW spr round 33 (radius: 15)
[12:30:52 -6694.124673] SLOW spr round 34 (radius: 5)
[12:31:43 -6694.124402] SLOW spr round 35 (radius: 10)
[12:32:31 -6694.124394] SLOW spr round 36 (radius: 15)
[12:33:27 -6694.124392] SLOW spr round 37 (radius: 20)
[12:34:38 -6688.866935] SLOW spr round 38 (radius: 5)
[12:35:28 -6687.962795] SLOW spr round 39 (radius: 5)
[12:36:15 -6687.960947] SLOW spr round 40 (radius: 10)
[12:37:03 -6684.144288] SLOW spr round 41 (radius: 5)
[12:37:51 -6683.680943] SLOW spr round 42 (radius: 5)
[12:38:36 -6683.680936] SLOW spr round 43 (radius: 10)
[12:39:24 -6683.570524] SLOW spr round 44 (radius: 5)
[12:40:11 -6683.570521] SLOW spr round 45 (radius: 10)
[12:40:59 -6683.570519] SLOW spr round 46 (radius: 15)
[12:41:54 -6683.570516] SLOW spr round 47 (radius: 20)
[12:43:05 -6662.731726] SLOW spr round 48 (radius: 5)
[12:43:55 -6662.731723] SLOW spr round 49 (radius: 10)
[12:44:44 -6662.731720] SLOW spr round 50 (radius: 15)
[12:45:39 -6662.731718] SLOW spr round 51 (radius: 20)
[12:46:51 -6662.731715] SLOW spr round 52 (radius: 25)
[12:48:12 -6656.239220] SLOW spr round 53 (radius: 5)
[12:49:03 -6656.237839] SLOW spr round 54 (radius: 10)
[12:49:53 -6656.237765] SLOW spr round 55 (radius: 15)
[12:50:48 -6656.237759] SLOW spr round 56 (radius: 20)
[12:51:58 -6647.288185] SLOW spr round 57 (radius: 5)
[12:52:49 -6647.287946] SLOW spr round 58 (radius: 10)
[12:53:38 -6647.287913] SLOW spr round 59 (radius: 15)
[12:54:33 -6647.287907] SLOW spr round 60 (radius: 20)
[12:55:43 -6647.287904] SLOW spr round 61 (radius: 25)
[12:57:00 -6647.077519] SLOW spr round 62 (radius: 5)
[12:57:51 -6647.077517] SLOW spr round 63 (radius: 10)
[12:58:41 -6647.077514] SLOW spr round 64 (radius: 15)
[12:59:35 -6647.077512] SLOW spr round 65 (radius: 20)
[13:00:45 -6647.077510] SLOW spr round 66 (radius: 25)
[13:02:02 -6647.077507] Model parameter optimization (eps = 0.100000)

[13:02:09] ML tree search #12, logLikelihood: -6645.076102

[13:02:09 -35982.367173] Initial branch length optimization
[13:02:10 -27288.703110] Model parameter optimization (eps = 10.000000)
[13:04:43 -26434.159754] AUTODETECT spr round 1 (radius: 5)
[13:05:25 -19546.066369] AUTODETECT spr round 2 (radius: 10)
[13:06:12 -15279.684108] AUTODETECT spr round 3 (radius: 15)
[13:07:05 -12072.775195] AUTODETECT spr round 4 (radius: 20)
[13:08:07 -9110.983641] AUTODETECT spr round 5 (radius: 25)
[13:09:06 -8413.301406] SPR radius for FAST iterations: 25 (autodetect)
[13:09:06 -8413.301406] Model parameter optimization (eps = 3.000000)
[13:09:25 -8285.109744] FAST spr round 1 (radius: 25)
[13:10:16 -6894.879733] FAST spr round 2 (radius: 25)
[13:11:03 -6763.043214] FAST spr round 3 (radius: 25)
[13:11:50 -6748.724192] FAST spr round 4 (radius: 25)
[13:12:35 -6733.330426] FAST spr round 5 (radius: 25)
[13:13:21 -6727.579573] FAST spr round 6 (radius: 25)
[13:14:06 -6727.579501] Model parameter optimization (eps = 1.000000)
[13:14:15 -6719.885854] SLOW spr round 1 (radius: 5)
[13:15:01 -6675.383921] SLOW spr round 2 (radius: 5)
[13:15:48 -6668.629584] SLOW spr round 3 (radius: 5)
[13:16:34 -6667.403250] SLOW spr round 4 (radius: 5)
[13:17:22 -6666.670024] SLOW spr round 5 (radius: 5)
[13:18:07 -6666.669781] SLOW spr round 6 (radius: 10)
[13:18:56 -6665.662489] SLOW spr round 7 (radius: 5)
[13:19:45 -6664.434911] SLOW spr round 8 (radius: 5)
[13:20:31 -6664.433583] SLOW spr round 9 (radius: 10)
[13:21:19 -6663.531070] SLOW spr round 10 (radius: 5)
[13:22:07 -6663.531015] SLOW spr round 11 (radius: 10)
[13:22:55 -6659.268418] SLOW spr round 12 (radius: 5)
[13:23:43 -6656.886950] SLOW spr round 13 (radius: 5)
[13:24:29 -6656.886552] SLOW spr round 14 (radius: 10)
[13:25:17 -6656.886544] SLOW spr round 15 (radius: 15)
[13:26:12 -6627.484116] SLOW spr round 16 (radius: 5)
[13:27:03 -6613.695412] SLOW spr round 17 (radius: 5)
[13:27:50 -6611.767094] SLOW spr round 18 (radius: 5)
[13:28:35 -6611.767052] SLOW spr round 19 (radius: 10)
[13:29:23 -6611.767048] SLOW spr round 20 (radius: 15)
[13:30:17 -6608.225043] SLOW spr round 21 (radius: 5)
[13:31:07 -6607.839302] SLOW spr round 22 (radius: 5)
[13:31:53 -6607.830033] SLOW spr round 23 (radius: 10)
[13:32:41 -6606.289514] SLOW spr round 24 (radius: 5)
[13:33:28 -6606.289417] SLOW spr round 25 (radius: 10)
[13:34:15 -6606.289413] SLOW spr round 26 (radius: 15)
[13:35:08 -6605.118691] SLOW spr round 27 (radius: 5)
[13:35:58 -6604.853881] SLOW spr round 28 (radius: 5)
[13:36:44 -6604.853696] SLOW spr round 29 (radius: 10)
[13:37:32 -6604.853681] SLOW spr round 30 (radius: 15)
[13:38:25 -6603.605668] SLOW spr round 31 (radius: 5)
[13:39:14 -6603.605665] SLOW spr round 32 (radius: 10)
[13:40:02 -6601.726276] SLOW spr round 33 (radius: 5)
[13:40:49 -6601.371377] SLOW spr round 34 (radius: 5)
[13:41:34 -6601.370985] SLOW spr round 35 (radius: 10)
[13:42:20 -6601.370983] SLOW spr round 36 (radius: 15)
[13:43:14 -6601.370983] SLOW spr round 37 (radius: 20)
[13:44:20 -6596.469337] SLOW spr round 38 (radius: 5)
[13:45:10 -6595.528237] SLOW spr round 39 (radius: 5)
[13:45:56 -6595.527309] SLOW spr round 40 (radius: 10)
[13:46:42 -6595.527292] SLOW spr round 41 (radius: 15)
[13:47:34 -6595.527285] SLOW spr round 42 (radius: 20)
[13:48:38 -6594.998847] SLOW spr round 43 (radius: 5)
[13:49:28 -6592.078832] SLOW spr round 44 (radius: 5)
[13:50:14 -6592.078589] SLOW spr round 45 (radius: 10)
[13:51:00 -6592.078349] SLOW spr round 46 (radius: 15)
[13:51:52 -6592.078087] SLOW spr round 47 (radius: 20)
[13:52:57 -6592.077843] SLOW spr round 48 (radius: 25)
[13:54:10 -6578.501185] SLOW spr round 49 (radius: 5)
[13:55:01 -6577.369796] SLOW spr round 50 (radius: 5)
[13:55:47 -6577.368944] SLOW spr round 51 (radius: 10)
[13:56:34 -6577.368661] SLOW spr round 52 (radius: 15)
[13:57:26 -6577.368396] SLOW spr round 53 (radius: 20)
[13:58:31 -6577.368134] SLOW spr round 54 (radius: 25)
[13:59:45 -6577.347590] Model parameter optimization (eps = 0.100000)

[13:59:52] ML tree search #13, logLikelihood: -6573.673871

[13:59:52 -36183.417718] Initial branch length optimization
[13:59:52 -27587.147758] Model parameter optimization (eps = 10.000000)
[14:02:10 -26806.775903] AUTODETECT spr round 1 (radius: 5)
[14:02:52 -19135.671378] AUTODETECT spr round 2 (radius: 10)
[14:03:38 -14173.638773] AUTODETECT spr round 3 (radius: 15)
[14:04:31 -12101.191198] AUTODETECT spr round 4 (radius: 20)
[14:05:25 -9845.617970] AUTODETECT spr round 5 (radius: 25)
[14:06:26 -8640.139988] SPR radius for FAST iterations: 25 (autodetect)
[14:06:26 -8640.139988] Model parameter optimization (eps = 3.000000)
[14:06:42 -8422.039927] FAST spr round 1 (radius: 25)
[14:07:32 -7063.426011] FAST spr round 2 (radius: 25)
[14:08:18 -6986.699486] FAST spr round 3 (radius: 25)
[14:09:03 -6985.362962] FAST spr round 4 (radius: 25)
[14:09:47 -6985.200031] FAST spr round 5 (radius: 25)
[14:10:30 -6985.196997] Model parameter optimization (eps = 1.000000)
[14:10:38 -6973.543199] SLOW spr round 1 (radius: 5)
[14:11:24 -6927.622118] SLOW spr round 2 (radius: 5)
[14:12:10 -6926.967295] SLOW spr round 3 (radius: 5)
[14:12:55 -6926.967219] SLOW spr round 4 (radius: 10)
[14:13:44 -6925.909542] SLOW spr round 5 (radius: 5)
[14:14:36 -6921.401864] SLOW spr round 6 (radius: 5)
[14:15:23 -6921.401789] SLOW spr round 7 (radius: 10)
[14:16:12 -6921.401765] SLOW spr round 8 (radius: 15)
[14:17:12 -6893.419885] SLOW spr round 9 (radius: 5)
[14:18:03 -6893.297659] SLOW spr round 10 (radius: 5)
[14:18:51 -6893.295876] SLOW spr round 11 (radius: 10)
[14:19:39 -6891.009662] SLOW spr round 12 (radius: 5)
[14:20:28 -6891.009531] SLOW spr round 13 (radius: 10)
[14:21:16 -6890.422268] SLOW spr round 14 (radius: 5)
[14:22:06 -6890.422267] SLOW spr round 15 (radius: 10)
[14:22:54 -6890.422267] SLOW spr round 16 (radius: 15)
[14:23:52 -6890.422267] SLOW spr round 17 (radius: 20)
[14:25:10 -6875.023260] SLOW spr round 18 (radius: 5)
[14:26:04 -6867.024023] SLOW spr round 19 (radius: 5)
[14:26:51 -6866.951639] SLOW spr round 20 (radius: 10)
[14:27:40 -6866.951475] SLOW spr round 21 (radius: 15)
[14:28:38 -6866.547188] SLOW spr round 22 (radius: 5)
[14:29:30 -6866.546478] SLOW spr round 23 (radius: 10)
[14:30:18 -6866.546448] SLOW spr round 24 (radius: 15)
[14:31:16 -6866.546446] SLOW spr round 25 (radius: 20)
[14:32:32 -6828.045487] SLOW spr round 26 (radius: 5)
[14:33:23 -6827.090368] SLOW spr round 27 (radius: 5)
[14:34:10 -6827.090345] SLOW spr round 28 (radius: 10)
[14:34:59 -6826.577221] SLOW spr round 29 (radius: 5)
[14:35:48 -6826.576916] SLOW spr round 30 (radius: 10)
[14:36:37 -6826.576911] SLOW spr round 31 (radius: 15)
[14:37:34 -6826.576911] SLOW spr round 32 (radius: 20)
[14:38:52 -6823.931168] SLOW spr round 33 (radius: 5)
[14:39:44 -6823.930404] SLOW spr round 34 (radius: 10)
[14:40:33 -6822.974001] SLOW spr round 35 (radius: 5)
[14:41:22 -6822.973988] SLOW spr round 36 (radius: 10)
[14:42:10 -6822.973988] SLOW spr round 37 (radius: 15)
[14:43:07 -6822.973988] SLOW spr round 38 (radius: 20)
[14:44:22 -6819.777683] SLOW spr round 39 (radius: 5)
[14:45:14 -6818.132656] SLOW spr round 40 (radius: 5)
[14:46:01 -6818.132005] SLOW spr round 41 (radius: 10)
[14:46:48 -6818.131447] SLOW spr round 42 (radius: 15)
[14:47:45 -6818.130947] SLOW spr round 43 (radius: 20)
[14:49:01 -6818.130479] SLOW spr round 44 (radius: 25)
[14:50:25 -6802.475591] SLOW spr round 45 (radius: 5)
[14:51:17 -6751.562925] SLOW spr round 46 (radius: 5)
[14:52:06 -6751.558366] SLOW spr round 47 (radius: 10)
[14:52:53 -6751.558352] SLOW spr round 48 (radius: 15)
[14:53:51 -6742.840061] SLOW spr round 49 (radius: 5)
[14:54:42 -6742.839777] SLOW spr round 50 (radius: 10)
[14:55:31 -6742.839745] SLOW spr round 51 (radius: 15)
[14:56:28 -6742.839738] SLOW spr round 52 (radius: 20)
[14:57:44 -6741.793698] SLOW spr round 53 (radius: 5)
[14:58:35 -6741.793696] SLOW spr round 54 (radius: 10)
[14:59:24 -6741.793694] SLOW spr round 55 (radius: 15)
[15:00:20 -6741.793691] SLOW spr round 56 (radius: 20)
[15:01:36 -6741.793689] SLOW spr round 57 (radius: 25)
[15:02:59 -6741.793687] Model parameter optimization (eps = 0.100000)

[15:03:09] ML tree search #14, logLikelihood: -6738.410440

[15:03:09 -36038.043519] Initial branch length optimization
[15:03:10 -27384.844316] Model parameter optimization (eps = 10.000000)
[15:03:44 -26816.545731] AUTODETECT spr round 1 (radius: 5)
[15:04:27 -19617.343560] AUTODETECT spr round 2 (radius: 10)
[15:05:14 -14530.770223] AUTODETECT spr round 3 (radius: 15)
[15:06:08 -11600.280894] AUTODETECT spr round 4 (radius: 20)
[15:07:02 -10494.665962] AUTODETECT spr round 5 (radius: 25)
[15:07:57 -9992.714058] SPR radius for FAST iterations: 25 (autodetect)
[15:07:57 -9992.714058] Model parameter optimization (eps = 3.000000)
[15:08:12 -9666.868998] FAST spr round 1 (radius: 25)
[15:09:05 -7475.690920] FAST spr round 2 (radius: 25)
[15:09:54 -7170.588507] FAST spr round 3 (radius: 25)
[15:10:43 -7125.107504] FAST spr round 4 (radius: 25)
[15:11:31 -7108.168977] FAST spr round 5 (radius: 25)
[15:12:17 -7108.168079] Model parameter optimization (eps = 1.000000)
[15:12:24 -7100.936154] SLOW spr round 1 (radius: 5)
[15:13:11 -6951.425843] SLOW spr round 2 (radius: 5)
[15:13:58 -6941.852658] SLOW spr round 3 (radius: 5)
[15:14:44 -6926.304100] SLOW spr round 4 (radius: 5)
[15:15:31 -6925.483025] SLOW spr round 5 (radius: 5)
[15:16:18 -6925.482649] SLOW spr round 6 (radius: 10)
[15:17:07 -6886.607087] SLOW spr round 7 (radius: 5)
[15:17:56 -6870.795392] SLOW spr round 8 (radius: 5)
[15:18:43 -6870.600832] SLOW spr round 9 (radius: 5)
[15:19:29 -6870.597277] SLOW spr round 10 (radius: 10)
[15:20:18 -6865.802771] SLOW spr round 11 (radius: 5)
[15:21:06 -6865.802700] SLOW spr round 12 (radius: 10)
[15:21:53 -6853.116108] SLOW spr round 13 (radius: 5)
[15:22:40 -6843.591214] SLOW spr round 14 (radius: 5)
[15:23:25 -6843.591147] SLOW spr round 15 (radius: 10)
[15:24:11 -6843.591087] SLOW spr round 16 (radius: 15)
[15:25:04 -6814.710013] SLOW spr round 17 (radius: 5)
[15:25:54 -6787.484393] SLOW spr round 18 (radius: 5)
[15:26:40 -6785.065290] SLOW spr round 19 (radius: 5)
[15:27:24 -6784.890481] SLOW spr round 20 (radius: 5)
[15:28:09 -6784.889532] SLOW spr round 21 (radius: 10)
[15:28:55 -6784.221933] SLOW spr round 22 (radius: 5)
[15:29:41 -6784.221872] SLOW spr round 23 (radius: 10)
[15:30:27 -6784.221814] SLOW spr round 24 (radius: 15)
[15:31:20 -6738.752360] SLOW spr round 25 (radius: 5)
[15:32:09 -6717.671692] SLOW spr round 26 (radius: 5)
[15:32:55 -6717.316030] SLOW spr round 27 (radius: 5)
[15:33:40 -6717.315881] SLOW spr round 28 (radius: 10)
[15:34:25 -6717.315808] SLOW spr round 29 (radius: 15)
[15:35:18 -6716.126024] SLOW spr round 30 (radius: 5)
[15:36:06 -6716.125965] SLOW spr round 31 (radius: 10)
[15:36:52 -6716.125908] SLOW spr round 32 (radius: 15)
[15:37:44 -6716.125852] SLOW spr round 33 (radius: 20)
[15:38:53 -6692.724807] SLOW spr round 34 (radius: 5)
[15:39:42 -6692.264807] SLOW spr round 35 (radius: 5)
[15:40:29 -6691.579186] SLOW spr round 36 (radius: 5)
[15:41:14 -6691.578319] SLOW spr round 37 (radius: 10)
[15:42:00 -6687.960348] SLOW spr round 38 (radius: 5)
[15:42:48 -6687.540517] SLOW spr round 39 (radius: 5)
[15:43:33 -6687.540420] SLOW spr round 40 (radius: 10)
[15:44:20 -6687.540348] SLOW spr round 41 (radius: 15)
[15:45:13 -6682.410216] SLOW spr round 42 (radius: 5)
[15:46:03 -6681.899171] SLOW spr round 43 (radius: 5)
[15:46:49 -6681.899063] SLOW spr round 44 (radius: 10)
[15:47:36 -6681.393035] SLOW spr round 45 (radius: 5)
[15:48:23 -6681.392713] SLOW spr round 46 (radius: 10)
[15:49:10 -6681.392610] SLOW spr round 47 (radius: 15)
[15:50:03 -6681.392563] SLOW spr round 48 (radius: 20)
[15:51:12 -6681.258268] SLOW spr round 49 (radius: 5)
[15:52:02 -6680.678922] SLOW spr round 50 (radius: 5)
[15:52:48 -6680.678916] SLOW spr round 51 (radius: 10)
[15:53:35 -6680.678916] SLOW spr round 52 (radius: 15)
[15:54:28 -6680.486250] SLOW spr round 53 (radius: 5)
[15:55:18 -6680.485702] SLOW spr round 54 (radius: 10)
[15:56:05 -6680.485702] SLOW spr round 55 (radius: 15)
[15:56:58 -6680.485702] SLOW spr round 56 (radius: 20)
[15:58:07 -6680.485702] SLOW spr round 57 (radius: 25)
[15:59:23 -6636.452315] SLOW spr round 58 (radius: 5)
[16:00:14 -6634.775402] SLOW spr round 59 (radius: 5)
[16:01:00 -6634.774892] SLOW spr round 60 (radius: 10)
[16:01:47 -6628.275189] SLOW spr round 61 (radius: 5)
[16:02:34 -6628.275168] SLOW spr round 62 (radius: 10)
[16:03:21 -6628.275156] SLOW spr round 63 (radius: 15)
[16:04:14 -6628.275155] SLOW spr round 64 (radius: 20)
[16:05:22 -6619.564408] SLOW spr round 65 (radius: 5)
[16:06:12 -6619.564389] SLOW spr round 66 (radius: 10)
[16:06:59 -6619.564389] SLOW spr round 67 (radius: 15)
[16:07:52 -6619.564389] SLOW spr round 68 (radius: 20)
[16:09:00 -6619.564389] SLOW spr round 69 (radius: 25)
[16:10:15 -6611.854122] SLOW spr round 70 (radius: 5)
[16:11:06 -6607.553750] SLOW spr round 71 (radius: 5)
[16:11:54 -6607.521700] SLOW spr round 72 (radius: 10)
[16:12:41 -6605.761954] SLOW spr round 73 (radius: 5)
[16:13:30 -6603.762878] SLOW spr round 74 (radius: 5)
[16:14:16 -6603.732305] SLOW spr round 75 (radius: 10)
[16:15:04 -6603.112975] SLOW spr round 76 (radius: 5)
[16:15:51 -6603.112447] SLOW spr round 77 (radius: 10)
[16:16:39 -6603.112306] SLOW spr round 78 (radius: 15)
[16:17:33 -6598.670377] SLOW spr round 79 (radius: 5)
[16:18:23 -6598.670372] SLOW spr round 80 (radius: 10)
[16:19:11 -6598.670371] SLOW spr round 81 (radius: 15)
[16:20:05 -6598.670371] SLOW spr round 82 (radius: 20)
[16:21:15 -6597.739299] SLOW spr round 83 (radius: 5)
[16:22:05 -6597.338411] SLOW spr round 84 (radius: 5)
[16:22:51 -6597.338410] SLOW spr round 85 (radius: 10)
[16:23:39 -6597.338410] SLOW spr round 86 (radius: 15)
[16:24:33 -6597.338410] SLOW spr round 87 (radius: 20)
[16:25:42 -6597.338410] SLOW spr round 88 (radius: 25)
[16:26:58 -6596.322099] SLOW spr round 89 (radius: 5)
[16:27:48 -6596.290589] SLOW spr round 90 (radius: 10)
[16:28:36 -6596.288959] SLOW spr round 91 (radius: 15)
[16:29:30 -6596.288282] SLOW spr round 92 (radius: 20)
[16:30:38 -6596.101177] SLOW spr round 93 (radius: 5)
[16:31:28 -6596.100911] SLOW spr round 94 (radius: 10)
[16:32:16 -6596.100767] SLOW spr round 95 (radius: 15)
[16:33:09 -6596.100675] SLOW spr round 96 (radius: 20)
[16:34:18 -6596.100615] SLOW spr round 97 (radius: 25)
[16:35:33 -6596.100576] Model parameter optimization (eps = 0.100000)

[16:35:38] ML tree search #15, logLikelihood: -6593.899357

[16:35:38 -36132.178193] Initial branch length optimization
[16:35:38 -27616.987788] Model parameter optimization (eps = 10.000000)
[16:37:39 -26847.921066] AUTODETECT spr round 1 (radius: 5)
[16:38:20 -19412.114234] AUTODETECT spr round 2 (radius: 10)
[16:39:05 -14488.291680] AUTODETECT spr round 3 (radius: 15)
[16:39:54 -11706.496399] AUTODETECT spr round 4 (radius: 20)
[16:40:46 -10481.102547] AUTODETECT spr round 5 (radius: 25)
[16:41:47 -9763.384978] SPR radius for FAST iterations: 25 (autodetect)
[16:41:47 -9763.384978] Model parameter optimization (eps = 3.000000)
[16:42:03 -9625.857482] FAST spr round 1 (radius: 25)
[16:42:55 -7402.354004] FAST spr round 2 (radius: 25)
[16:43:42 -6990.280730] FAST spr round 3 (radius: 25)
[16:44:30 -6958.319211] FAST spr round 4 (radius: 25)
[16:45:16 -6958.061274] FAST spr round 5 (radius: 25)
[16:46:01 -6958.059274] Model parameter optimization (eps = 1.000000)
[16:46:09 -6915.216642] SLOW spr round 1 (radius: 5)
[16:46:55 -6906.411867] SLOW spr round 2 (radius: 5)
[16:47:41 -6902.636270] SLOW spr round 3 (radius: 5)
[16:48:27 -6901.836782] SLOW spr round 4 (radius: 5)
[16:49:12 -6901.836775] SLOW spr round 5 (radius: 10)
[16:50:00 -6894.389196] SLOW spr round 6 (radius: 5)
[16:50:50 -6891.254162] SLOW spr round 7 (radius: 5)
[16:51:36 -6890.847968] SLOW spr round 8 (radius: 5)
[16:52:20 -6890.847533] SLOW spr round 9 (radius: 10)
[16:53:07 -6889.252878] SLOW spr round 10 (radius: 5)
[16:53:55 -6889.251469] SLOW spr round 11 (radius: 10)
[16:54:43 -6889.251461] SLOW spr round 12 (radius: 15)
[16:55:40 -6844.516221] SLOW spr round 13 (radius: 5)
[16:56:31 -6830.996847] SLOW spr round 14 (radius: 5)
[16:57:18 -6829.081997] SLOW spr round 15 (radius: 5)
[16:58:02 -6829.018206] SLOW spr round 16 (radius: 10)
[16:58:49 -6793.015826] SLOW spr round 17 (radius: 5)
[16:59:38 -6777.153207] SLOW spr round 18 (radius: 5)
[17:00:25 -6775.889034] SLOW spr round 19 (radius: 5)
[17:01:10 -6775.242218] SLOW spr round 20 (radius: 5)
[17:01:55 -6774.966551] SLOW spr round 21 (radius: 5)
[17:02:38 -6774.966418] SLOW spr round 22 (radius: 10)
[17:03:25 -6765.448389] SLOW spr round 23 (radius: 5)
[17:04:13 -6748.671675] SLOW spr round 24 (radius: 5)
[17:04:59 -6748.592118] SLOW spr round 25 (radius: 10)
[17:05:45 -6748.590795] SLOW spr round 26 (radius: 15)
[17:06:40 -6701.355980] SLOW spr round 27 (radius: 5)
[17:07:30 -6696.963733] SLOW spr round 28 (radius: 5)
[17:08:16 -6696.916030] SLOW spr round 29 (radius: 10)
[17:09:02 -6696.913433] SLOW spr round 30 (radius: 15)
[17:09:57 -6696.403504] SLOW spr round 31 (radius: 5)
[17:10:46 -6696.403014] SLOW spr round 32 (radius: 10)
[17:11:33 -6696.402712] SLOW spr round 33 (radius: 15)
[17:12:26 -6696.402523] SLOW spr round 34 (radius: 20)
[17:13:35 -6657.882147] SLOW spr round 35 (radius: 5)
[17:14:25 -6657.499882] SLOW spr round 36 (radius: 5)
[17:15:10 -6657.497431] SLOW spr round 37 (radius: 10)
[17:15:56 -6657.495811] SLOW spr round 38 (radius: 15)
[17:16:49 -6655.379166] SLOW spr round 39 (radius: 5)
[17:17:38 -6655.323438] SLOW spr round 40 (radius: 10)
[17:18:24 -6655.321780] SLOW spr round 41 (radius: 15)
[17:19:18 -6609.985064] SLOW spr round 42 (radius: 5)
[17:20:07 -6609.489587] SLOW spr round 43 (radius: 5)
[17:20:52 -6609.487788] SLOW spr round 44 (radius: 10)
[17:21:37 -6609.486329] SLOW spr round 45 (radius: 15)
[17:22:30 -6607.579688] SLOW spr round 46 (radius: 5)
[17:23:18 -6606.744617] SLOW spr round 47 (radius: 5)
[17:24:03 -6606.743996] SLOW spr round 48 (radius: 10)
[17:24:49 -6606.743589] SLOW spr round 49 (radius: 15)
[17:25:42 -6606.743321] SLOW spr round 50 (radius: 20)
[17:26:49 -6605.052880] SLOW spr round 51 (radius: 5)
[17:27:38 -6605.026486] SLOW spr round 52 (radius: 10)
[17:28:25 -6605.026308] SLOW spr round 53 (radius: 15)
[17:29:18 -6601.023770] SLOW spr round 54 (radius: 5)
[17:30:07 -6600.797975] SLOW spr round 55 (radius: 5)
[17:30:51 -6600.797602] SLOW spr round 56 (radius: 10)
[17:31:37 -6600.797526] SLOW spr round 57 (radius: 15)
[17:32:31 -6600.797451] SLOW spr round 58 (radius: 20)
[17:33:39 -6600.609380] SLOW spr round 59 (radius: 5)
[17:34:29 -6554.277598] SLOW spr round 60 (radius: 5)
[17:35:15 -6542.628715] SLOW spr round 61 (radius: 5)
[17:35:59 -6542.628642] SLOW spr round 62 (radius: 10)
[17:36:44 -6542.628570] SLOW spr round 63 (radius: 15)
[17:37:38 -6537.894994] SLOW spr round 64 (radius: 5)
[17:38:26 -6537.894943] SLOW spr round 65 (radius: 10)
[17:39:13 -6537.894943] SLOW spr round 66 (radius: 15)
[17:40:06 -6537.894943] SLOW spr round 67 (radius: 20)
[17:41:13 -6537.894943] SLOW spr round 68 (radius: 25)
[17:42:29 -6537.347329] SLOW spr round 69 (radius: 5)
[17:43:18 -6537.347299] SLOW spr round 70 (radius: 10)
[17:44:05 -6537.347275] SLOW spr round 71 (radius: 15)
[17:44:58 -6533.167019] SLOW spr round 72 (radius: 5)
[17:45:47 -6533.166101] SLOW spr round 73 (radius: 10)
[17:46:34 -6529.765586] SLOW spr round 74 (radius: 5)
[17:47:20 -6529.740695] SLOW spr round 75 (radius: 10)
[17:48:06 -6529.739687] SLOW spr round 76 (radius: 15)
[17:48:59 -6499.637862] SLOW spr round 77 (radius: 5)
[17:49:47 -6495.164541] SLOW spr round 78 (radius: 5)
[17:50:32 -6495.164541] SLOW spr round 79 (radius: 10)
[17:51:18 -6495.164541] SLOW spr round 80 (radius: 15)
[17:52:10 -6495.164541] SLOW spr round 81 (radius: 20)
[17:53:17 -6495.164541] SLOW spr round 82 (radius: 25)
[17:54:30 -6495.164541] Model parameter optimization (eps = 0.100000)

[17:54:37] ML tree search #16, logLikelihood: -6494.277163

[17:54:37 -36227.833736] Initial branch length optimization
[17:54:37 -27419.645374] Model parameter optimization (eps = 10.000000)
[17:55:29 -26924.333253] AUTODETECT spr round 1 (radius: 5)
[17:56:10 -19543.452114] AUTODETECT spr round 2 (radius: 10)
[17:56:57 -14630.895443] AUTODETECT spr round 3 (radius: 15)
[17:57:48 -11313.468192] AUTODETECT spr round 4 (radius: 20)
[17:58:40 -9672.065705] AUTODETECT spr round 5 (radius: 25)
[17:59:34 -9042.167694] SPR radius for FAST iterations: 25 (autodetect)
[17:59:34 -9042.167694] Model parameter optimization (eps = 3.000000)
[17:59:58 -8762.697386] FAST spr round 1 (radius: 25)
[18:00:48 -7161.125828] FAST spr round 2 (radius: 25)
[18:01:36 -6918.680328] FAST spr round 3 (radius: 25)
[18:02:24 -6870.644619] FAST spr round 4 (radius: 25)
[18:03:09 -6868.749740] FAST spr round 5 (radius: 25)
[18:03:55 -6868.749251] Model parameter optimization (eps = 1.000000)
[18:03:59 -6867.962300] SLOW spr round 1 (radius: 5)
[18:04:45 -6843.464468] SLOW spr round 2 (radius: 5)
[18:05:30 -6843.043436] SLOW spr round 3 (radius: 5)
[18:06:15 -6843.043326] SLOW spr round 4 (radius: 10)
[18:07:02 -6839.585945] SLOW spr round 5 (radius: 5)
[18:07:51 -6835.462196] SLOW spr round 6 (radius: 5)
[18:08:37 -6833.325737] SLOW spr round 7 (radius: 5)
[18:09:21 -6833.325292] SLOW spr round 8 (radius: 10)
[18:10:08 -6827.459585] SLOW spr round 9 (radius: 5)
[18:10:57 -6826.821169] SLOW spr round 10 (radius: 5)
[18:11:41 -6826.820915] SLOW spr round 11 (radius: 10)
[18:12:28 -6826.820843] SLOW spr round 12 (radius: 15)
[18:13:23 -6711.660434] SLOW spr round 13 (radius: 5)
[18:14:13 -6682.227399] SLOW spr round 14 (radius: 5)
[18:14:59 -6680.282049] SLOW spr round 15 (radius: 5)
[18:15:44 -6680.282027] SLOW spr round 16 (radius: 10)
[18:16:30 -6680.075723] SLOW spr round 17 (radius: 5)
[18:17:18 -6680.075035] SLOW spr round 18 (radius: 10)
[18:18:04 -6680.075029] SLOW spr round 19 (radius: 15)
[18:18:58 -6628.978641] SLOW spr round 20 (radius: 5)
[18:19:47 -6626.213163] SLOW spr round 21 (radius: 5)
[18:20:33 -6626.212481] SLOW spr round 22 (radius: 10)
[18:21:19 -6626.212209] SLOW spr round 23 (radius: 15)
[18:22:12 -6626.204443] SLOW spr round 24 (radius: 20)
[18:23:16 -6598.978235] SLOW spr round 25 (radius: 5)
[18:24:05 -6598.976269] SLOW spr round 26 (radius: 10)
[18:24:52 -6598.975995] SLOW spr round 27 (radius: 15)
[18:25:45 -6598.975904] SLOW spr round 28 (radius: 20)
[18:26:50 -6598.957245] SLOW spr round 29 (radius: 25)
[18:28:03 -6586.572457] SLOW spr round 30 (radius: 5)
[18:28:54 -6584.436973] SLOW spr round 31 (radius: 5)
[18:29:41 -6584.436920] SLOW spr round 32 (radius: 10)
[18:30:29 -6581.121042] SLOW spr round 33 (radius: 5)
[18:31:17 -6579.634034] SLOW spr round 34 (radius: 5)
[18:32:03 -6579.633881] SLOW spr round 35 (radius: 10)
[18:32:50 -6579.633870] SLOW spr round 36 (radius: 15)
[18:33:49 -6570.172577] SLOW spr round 37 (radius: 5)
[18:34:42 -6570.172574] SLOW spr round 38 (radius: 10)
[18:35:32 -6570.172574] SLOW spr round 39 (radius: 15)
[18:36:29 -6570.172574] SLOW spr round 40 (radius: 20)
[18:37:39 -6569.206923] SLOW spr round 41 (radius: 5)
[18:38:31 -6569.206742] SLOW spr round 42 (radius: 10)
[18:39:21 -6569.206742] SLOW spr round 43 (radius: 15)
[18:40:18 -6569.206742] SLOW spr round 44 (radius: 20)
[18:41:28 -6569.206742] SLOW spr round 45 (radius: 25)
[18:42:47 -6567.352437] SLOW spr round 46 (radius: 5)
[18:43:39 -6567.352235] SLOW spr round 47 (radius: 10)
[18:44:28 -6567.352211] SLOW spr round 48 (radius: 15)
[18:45:25 -6567.352208] SLOW spr round 49 (radius: 20)
[18:46:34 -6567.352208] SLOW spr round 50 (radius: 25)
[18:47:52 -6567.352208] Model parameter optimization (eps = 0.100000)

[18:48:00] ML tree search #17, logLikelihood: -6566.109689

[18:48:00 -36058.644242] Initial branch length optimization
[18:48:01 -27330.980640] Model parameter optimization (eps = 10.000000)
[18:50:24 -26580.415010] AUTODETECT spr round 1 (radius: 5)
[18:51:07 -19431.017317] AUTODETECT spr round 2 (radius: 10)
[18:51:54 -15064.126604] AUTODETECT spr round 3 (radius: 15)
[18:52:45 -11801.637008] AUTODETECT spr round 4 (radius: 20)
[18:53:46 -10866.440460] AUTODETECT spr round 5 (radius: 25)
[18:54:47 -8836.552375] SPR radius for FAST iterations: 25 (autodetect)
[18:54:47 -8836.552375] Model parameter optimization (eps = 3.000000)
[18:55:09 -8503.851722] FAST spr round 1 (radius: 25)
[18:56:01 -7035.052420] FAST spr round 2 (radius: 25)
[18:56:50 -6916.064294] FAST spr round 3 (radius: 25)
[18:57:40 -6868.412059] FAST spr round 4 (radius: 25)
[18:58:30 -6820.152923] FAST spr round 5 (radius: 25)
[18:59:19 -6806.073159] FAST spr round 6 (radius: 25)
[19:00:08 -6805.143749] FAST spr round 7 (radius: 25)
[19:00:57 -6805.143383] Model parameter optimization (eps = 1.000000)
[19:01:03 -6803.843010] SLOW spr round 1 (radius: 5)
[19:01:54 -6797.959760] SLOW spr round 2 (radius: 5)
[19:02:45 -6762.656374] SLOW spr round 3 (radius: 5)
[19:03:34 -6757.772978] SLOW spr round 4 (radius: 5)
[19:04:22 -6757.771625] SLOW spr round 5 (radius: 10)
[19:05:13 -6730.514010] SLOW spr round 6 (radius: 5)
[19:06:05 -6720.786237] SLOW spr round 7 (radius: 5)
[19:06:54 -6720.399106] SLOW spr round 8 (radius: 5)
[19:07:42 -6720.397931] SLOW spr round 9 (radius: 10)
[19:08:33 -6720.397868] SLOW spr round 10 (radius: 15)
[19:09:32 -6715.374772] SLOW spr round 11 (radius: 5)
[19:10:26 -6712.408964] SLOW spr round 12 (radius: 5)
[19:11:15 -6711.947153] SLOW spr round 13 (radius: 5)
[19:12:03 -6711.946575] SLOW spr round 14 (radius: 10)
[19:12:53 -6711.416773] SLOW spr round 15 (radius: 5)
[19:13:44 -6711.416590] SLOW spr round 16 (radius: 10)
[19:14:34 -6711.416577] SLOW spr round 17 (radius: 15)
[19:15:32 -6711.223055] SLOW spr round 18 (radius: 5)
[19:16:25 -6711.223055] SLOW spr round 19 (radius: 10)
[19:17:16 -6708.631267] SLOW spr round 20 (radius: 5)
[19:18:06 -6708.373310] SLOW spr round 21 (radius: 5)
[19:18:54 -6708.373301] SLOW spr round 22 (radius: 10)
[19:19:44 -6708.373300] SLOW spr round 23 (radius: 15)
[19:20:42 -6708.373300] SLOW spr round 24 (radius: 20)
[19:21:56 -6671.813424] SLOW spr round 25 (radius: 5)
[19:22:50 -6664.409596] SLOW spr round 26 (radius: 5)
[19:23:39 -6662.407782] SLOW spr round 27 (radius: 5)
[19:24:26 -6662.407681] SLOW spr round 28 (radius: 10)
[19:25:15 -6634.857951] SLOW spr round 29 (radius: 5)
[19:26:05 -6634.856317] SLOW spr round 30 (radius: 10)
[19:26:54 -6634.305258] SLOW spr round 31 (radius: 5)
[19:27:44 -6634.304964] SLOW spr round 32 (radius: 10)
[19:28:33 -6634.304947] SLOW spr round 33 (radius: 15)
[19:29:30 -6629.588763] SLOW spr round 34 (radius: 5)
[19:30:23 -6575.196597] SLOW spr round 35 (radius: 5)
[19:31:12 -6570.593492] SLOW spr round 36 (radius: 5)
[19:31:58 -6570.593167] SLOW spr round 37 (radius: 10)
[19:32:48 -6570.593137] SLOW spr round 38 (radius: 15)
[19:33:45 -6569.456869] SLOW spr round 39 (radius: 5)
[19:34:37 -6569.069208] SLOW spr round 40 (radius: 5)
[19:35:25 -6569.068874] SLOW spr round 41 (radius: 10)
[19:36:14 -6569.068868] SLOW spr round 42 (radius: 15)
[19:37:11 -6569.068868] SLOW spr round 43 (radius: 20)
[19:38:23 -6568.429406] SLOW spr round 44 (radius: 5)
[19:39:15 -6568.422319] SLOW spr round 45 (radius: 10)
[19:40:05 -6567.043972] SLOW spr round 46 (radius: 5)
[19:40:55 -6566.366608] SLOW spr round 47 (radius: 5)
[19:41:42 -6566.366499] SLOW spr round 48 (radius: 10)
[19:42:32 -6566.366493] SLOW spr round 49 (radius: 15)
[19:43:28 -6565.695962] SLOW spr round 50 (radius: 5)
[19:44:19 -6565.695949] SLOW spr round 51 (radius: 10)
[19:45:09 -6565.695949] SLOW spr round 52 (radius: 15)
[19:46:05 -6565.695949] SLOW spr round 53 (radius: 20)
[19:47:18 -6564.882553] SLOW spr round 54 (radius: 5)
[19:48:11 -6564.842012] SLOW spr round 55 (radius: 10)
[19:49:00 -6564.842009] SLOW spr round 56 (radius: 15)
[19:49:56 -6564.842009] SLOW spr round 57 (radius: 20)
[19:51:07 -6564.842009] SLOW spr round 58 (radius: 25)
[19:52:29 -6536.682219] SLOW spr round 59 (radius: 5)
[19:53:22 -6509.407528] SLOW spr round 60 (radius: 5)
[19:54:10 -6507.464871] SLOW spr round 61 (radius: 5)
[19:54:57 -6507.464837] SLOW spr round 62 (radius: 10)
[19:55:46 -6506.191128] SLOW spr round 63 (radius: 5)
[19:56:35 -6506.190913] SLOW spr round 64 (radius: 10)
[19:57:26 -6506.190901] SLOW spr round 65 (radius: 15)
[19:58:23 -6506.190900] SLOW spr round 66 (radius: 20)
[19:59:37 -6506.190900] SLOW spr round 67 (radius: 25)
[20:01:00 -6504.846861] SLOW spr round 68 (radius: 5)
[20:01:55 -6504.362571] SLOW spr round 69 (radius: 5)
[20:02:44 -6504.362120] SLOW spr round 70 (radius: 10)
[20:03:34 -6504.362109] SLOW spr round 71 (radius: 15)
[20:04:29 -6504.255492] SLOW spr round 72 (radius: 5)
[20:05:20 -6504.255347] SLOW spr round 73 (radius: 10)
[20:06:09 -6504.255345] SLOW spr round 74 (radius: 15)
[20:07:05 -6504.255344] SLOW spr round 75 (radius: 20)
[20:08:16 -6504.255344] SLOW spr round 76 (radius: 25)
[20:09:33 -6504.255344] Model parameter optimization (eps = 0.100000)

[20:09:38] ML tree search #18, logLikelihood: -6502.573714

[20:09:38 -36132.493909] Initial branch length optimization
[20:09:39 -27619.325006] Model parameter optimization (eps = 10.000000)
[20:12:07 -26832.800070] AUTODETECT spr round 1 (radius: 5)
[20:12:50 -19448.824352] AUTODETECT spr round 2 (radius: 10)
[20:13:37 -14237.631903] AUTODETECT spr round 3 (radius: 15)
[20:14:29 -11389.912232] AUTODETECT spr round 4 (radius: 20)
[20:15:25 -9893.306521] AUTODETECT spr round 5 (radius: 25)
[20:16:26 -9015.044464] SPR radius for FAST iterations: 25 (autodetect)
[20:16:26 -9015.044464] Model parameter optimization (eps = 3.000000)
[20:16:43 -8848.033109] FAST spr round 1 (radius: 25)
[20:17:34 -7863.371233] FAST spr round 2 (radius: 25)
[20:18:21 -7806.325357] FAST spr round 3 (radius: 25)
[20:19:06 -7801.188537] FAST spr round 4 (radius: 25)
[20:19:51 -7799.258318] FAST spr round 5 (radius: 25)
[20:20:35 -7799.258253] Model parameter optimization (eps = 1.000000)
[20:20:42 -7792.980128] SLOW spr round 1 (radius: 5)
[20:21:30 -7790.416661] SLOW spr round 2 (radius: 5)
[20:22:19 -7788.527388] SLOW spr round 3 (radius: 5)
[20:23:06 -7788.527193] SLOW spr round 4 (radius: 10)
[20:23:56 -7787.305045] SLOW spr round 5 (radius: 5)
[20:24:49 -7783.414169] SLOW spr round 6 (radius: 5)
[20:25:39 -7782.423817] SLOW spr round 7 (radius: 5)
[20:26:27 -7782.422478] SLOW spr round 8 (radius: 10)
[20:27:16 -7782.422303] SLOW spr round 9 (radius: 15)
[20:28:16 -7760.149058] SLOW spr round 10 (radius: 5)
[20:29:12 -7759.611403] SLOW spr round 11 (radius: 5)
[20:30:03 -7759.597579] SLOW spr round 12 (radius: 10)
[20:30:52 -7759.597357] SLOW spr round 13 (radius: 15)
[20:31:52 -7758.818858] SLOW spr round 14 (radius: 5)
[20:32:47 -7758.818857] SLOW spr round 15 (radius: 10)
[20:33:38 -7757.673370] SLOW spr round 16 (radius: 5)
[20:34:31 -7757.469008] SLOW spr round 17 (radius: 5)
[20:35:20 -7757.468950] SLOW spr round 18 (radius: 10)
[20:36:10 -7757.468950] SLOW spr round 19 (radius: 15)
[20:37:10 -7757.468950] SLOW spr round 20 (radius: 20)
[20:38:24 -7751.732684] SLOW spr round 21 (radius: 5)
[20:39:20 -7751.273944] SLOW spr round 22 (radius: 5)
[20:40:11 -7751.272209] SLOW spr round 23 (radius: 10)
[20:41:01 -7751.272209] SLOW spr round 24 (radius: 15)
[20:42:01 -7751.272209] SLOW spr round 25 (radius: 20)
[20:43:16 -7749.350551] SLOW spr round 26 (radius: 5)
[20:44:12 -7749.282604] SLOW spr round 27 (radius: 10)
[20:45:04 -7749.282599] SLOW spr round 28 (radius: 15)
[20:46:04 -7749.282599] SLOW spr round 29 (radius: 20)
[20:47:19 -7749.282599] SLOW spr round 30 (radius: 25)
[20:48:45 -7706.608227] SLOW spr round 31 (radius: 5)
[20:49:42 -7702.681092] SLOW spr round 32 (radius: 5)
[20:50:33 -7702.680664] SLOW spr round 33 (radius: 10)
[20:51:23 -7702.680534] SLOW spr round 34 (radius: 15)
[20:52:24 -7702.680497] SLOW spr round 35 (radius: 20)
[20:53:41 -7702.680486] SLOW spr round 36 (radius: 25)
[20:55:06 -7700.539438] SLOW spr round 37 (radius: 5)
[20:56:04 -7678.810183] SLOW spr round 38 (radius: 5)
[20:56:55 -7678.810015] SLOW spr round 39 (radius: 10)
[20:57:46 -7678.810015] SLOW spr round 40 (radius: 15)
[20:58:47 -7678.810015] SLOW spr round 41 (radius: 20)
[21:00:03 -7678.810015] SLOW spr round 42 (radius: 25)
[21:01:29 -7677.932032] SLOW spr round 43 (radius: 5)
[21:02:25 -7677.932019] SLOW spr round 44 (radius: 10)
[21:03:19 -7677.932019] SLOW spr round 45 (radius: 15)
[21:04:20 -7677.932019] SLOW spr round 46 (radius: 20)
[21:05:36 -7677.932019] SLOW spr round 47 (radius: 25)
[21:07:02 -7677.932019] Model parameter optimization (eps = 0.100000)

[21:07:10] ML tree search #19, logLikelihood: -7677.396794

[21:07:11 -36252.326003] Initial branch length optimization
[21:07:11 -27730.668531] Model parameter optimization (eps = 10.000000)
[21:09:18 -27007.396401] AUTODETECT spr round 1 (radius: 5)
[21:10:01 -18809.361352] AUTODETECT spr round 2 (radius: 10)
[21:10:48 -13783.040633] AUTODETECT spr round 3 (radius: 15)
[21:11:40 -11326.337205] AUTODETECT spr round 4 (radius: 20)
[21:12:35 -9506.734733] AUTODETECT spr round 5 (radius: 25)
[21:13:35 -9059.700019] SPR radius for FAST iterations: 25 (autodetect)
[21:13:35 -9059.700019] Model parameter optimization (eps = 3.000000)
[21:13:50 -8933.150789] FAST spr round 1 (radius: 25)
[21:14:43 -7176.289528] FAST spr round 2 (radius: 25)
[21:15:32 -6943.422105] FAST spr round 3 (radius: 25)
[21:16:21 -6889.124537] FAST spr round 4 (radius: 25)
[21:17:09 -6888.683888] FAST spr round 5 (radius: 25)
[21:17:56 -6888.682511] Model parameter optimization (eps = 1.000000)
[21:18:04 -6881.893541] SLOW spr round 1 (radius: 5)
[21:18:52 -6881.139293] SLOW spr round 2 (radius: 5)
[21:19:39 -6881.133763] SLOW spr round 3 (radius: 10)
[21:20:28 -6874.864154] SLOW spr round 4 (radius: 5)
[21:21:17 -6874.442263] SLOW spr round 5 (radius: 5)
[21:22:04 -6874.441995] SLOW spr round 6 (radius: 10)
[21:22:53 -6872.267137] SLOW spr round 7 (radius: 5)
[21:23:42 -6872.266822] SLOW spr round 8 (radius: 10)
[21:24:31 -6871.222994] SLOW spr round 9 (radius: 5)
[21:25:19 -6871.222843] SLOW spr round 10 (radius: 10)
[21:26:08 -6871.222771] SLOW spr round 11 (radius: 15)
[21:27:02 -6865.221953] SLOW spr round 12 (radius: 5)
[21:27:53 -6865.221816] SLOW spr round 13 (radius: 10)
[21:28:42 -6865.221798] SLOW spr round 14 (radius: 15)
[21:29:35 -6865.221784] SLOW spr round 15 (radius: 20)
[21:30:46 -6789.678019] SLOW spr round 16 (radius: 5)
[21:31:39 -6765.902821] SLOW spr round 17 (radius: 5)
[21:32:27 -6712.325226] SLOW spr round 18 (radius: 5)
[21:33:15 -6702.253673] SLOW spr round 19 (radius: 5)
[21:34:01 -6698.821409] SLOW spr round 20 (radius: 5)
[21:34:48 -6694.862900] SLOW spr round 21 (radius: 5)
[21:35:34 -6693.864506] SLOW spr round 22 (radius: 5)
[21:36:19 -6693.864489] SLOW spr round 23 (radius: 10)
[21:37:08 -6683.631086] SLOW spr round 24 (radius: 5)
[21:37:56 -6683.621636] SLOW spr round 25 (radius: 10)
[21:38:44 -6672.884433] SLOW spr round 26 (radius: 5)
[21:39:32 -6672.884251] SLOW spr round 27 (radius: 10)
[21:40:21 -6672.884093] SLOW spr round 28 (radius: 15)
[21:41:13 -6672.586644] SLOW spr round 29 (radius: 5)
[21:42:04 -6672.586185] SLOW spr round 30 (radius: 10)
[21:42:53 -6672.586169] SLOW spr round 31 (radius: 15)
[21:43:46 -6672.586156] SLOW spr round 32 (radius: 20)
[21:44:53 -6669.383733] SLOW spr round 33 (radius: 5)
[21:45:44 -6669.382813] SLOW spr round 34 (radius: 10)
[21:46:33 -6669.382791] SLOW spr round 35 (radius: 15)
[21:47:25 -6669.382776] SLOW spr round 36 (radius: 20)
[21:48:34 -6669.382772] SLOW spr round 37 (radius: 25)
[21:49:50 -6651.429139] SLOW spr round 38 (radius: 5)
[21:50:43 -6650.576036] SLOW spr round 39 (radius: 5)
[21:51:31 -6650.575585] SLOW spr round 40 (radius: 10)
[21:52:20 -6645.564634] SLOW spr round 41 (radius: 5)
[21:53:09 -6645.522069] SLOW spr round 42 (radius: 10)
[21:53:58 -6645.339479] SLOW spr round 43 (radius: 5)
[21:54:46 -6645.339211] SLOW spr round 44 (radius: 10)
[21:55:35 -6645.339207] SLOW spr round 45 (radius: 15)
[21:56:29 -6624.529343] SLOW spr round 46 (radius: 5)
[21:57:20 -6623.914956] SLOW spr round 47 (radius: 5)
[21:58:08 -6623.914379] SLOW spr round 48 (radius: 10)
[21:58:57 -6623.914332] SLOW spr round 49 (radius: 15)
[21:59:51 -6623.914326] SLOW spr round 50 (radius: 20)
[22:00:59 -6623.914325] SLOW spr round 51 (radius: 25)
[22:02:17 -6619.919800] SLOW spr round 52 (radius: 5)
[22:03:10 -6556.867967] SLOW spr round 53 (radius: 5)
[22:04:00 -6549.151618] SLOW spr round 54 (radius: 5)
[22:04:47 -6547.711137] SLOW spr round 55 (radius: 5)
[22:05:33 -6547.706993] SLOW spr round 56 (radius: 10)
[22:06:20 -6546.739112] SLOW spr round 57 (radius: 5)
[22:07:09 -6546.739020] SLOW spr round 58 (radius: 10)
[22:07:58 -6546.738996] SLOW spr round 59 (radius: 15)
[22:08:50 -6545.626502] SLOW spr round 60 (radius: 5)
[22:09:42 -6545.570260] SLOW spr round 61 (radius: 10)
[22:10:32 -6543.612861] SLOW spr round 62 (radius: 5)
[22:11:21 -6542.870538] SLOW spr round 63 (radius: 5)
[22:12:09 -6542.870483] SLOW spr round 64 (radius: 10)
[22:12:57 -6542.870480] SLOW spr round 65 (radius: 15)
[22:13:50 -6541.510739] SLOW spr round 66 (radius: 5)
[22:14:41 -6541.287887] SLOW spr round 67 (radius: 5)
[22:15:29 -6541.287885] SLOW spr round 68 (radius: 10)
[22:16:17 -6541.287884] SLOW spr round 69 (radius: 15)
[22:17:11 -6541.287884] SLOW spr round 70 (radius: 20)
[22:18:16 -6541.287883] SLOW spr round 71 (radius: 25)
[22:19:31 -6539.501867] SLOW spr round 72 (radius: 5)
[22:20:23 -6539.379223] SLOW spr round 73 (radius: 5)
[22:21:11 -6539.379042] SLOW spr round 74 (radius: 10)
[22:22:00 -6539.087769] SLOW spr round 75 (radius: 5)
[22:22:48 -6539.087068] SLOW spr round 76 (radius: 10)
[22:23:37 -6539.086937] SLOW spr round 77 (radius: 15)
[22:24:29 -6539.086911] SLOW spr round 78 (radius: 20)
[22:25:36 -6539.086906] SLOW spr round 79 (radius: 25)
[22:26:51 -6539.086904] Model parameter optimization (eps = 0.100000)

[22:26:58] ML tree search #20, logLikelihood: -6538.145009


Optimized model parameters:

   Partition 0: noname
   Rate heterogeneity: FREE (4 cats, mean),  weights&rates: (0.250021,0.301272) (0.099996,0.459187) (0.549988,1.001626) (0.099995,3.278918) 
   Base frequencies (model): 
M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 
M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 
M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 
M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 
   Substitution rates (model): 
M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 
M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 
M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 
M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 


Final LogLikelihood: -6392.509071

AIC score: 16627.018142 / AICc score: 7400951.018142 / BIC score: 18539.819839
Free parameters (model + branch lengths): 1921

WARNING: Number of free parameters (K=1921) is larger than alignment size (n=20).
         This might lead to overfitting and compromise tree inference results!


WARNING: Best ML tree contains 668 near-zero branches!

Best ML tree with collapsed near-zero branches saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629.raxml.bestTreeCollapsed
Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629.raxml.bestTree
All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629.raxml.mlTrees
Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629.raxml.bestModel

Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P31629/3_mltree/P31629.raxml.log

Analysis started: 06-Jul-2021 15:24:16 / finished: 07-Jul-2021 13:51:15

Elapsed time: 80818.460 seconds

Consumed energy: 6965.364 Wh (= 35 km in an electric car, or 174 km with an e-scooter!)