RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 14:10:34 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/2_msa/P24723_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/3_mltree/P24723.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/4_raxmlng_ancestral/P24723 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622805034 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/2_msa/P24723_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 683 sites WARNING: Sequences sp_P68404_KPCB_MOUSE_10090 and sp_P68403_KPCB_RAT_10116 are exactly identical! WARNING: Sequences tr_M3YKR5_M3YKR5_MUSPF_9669 and tr_A0A2Y9KDV9_A0A2Y9KDV9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YY49_M3YY49_MUSPF_9669 and tr_A0A2Y9L4P5_A0A2Y9L4P5_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P05130_KPC1_DROME_7227 and tr_B4HTB4_B4HTB4_DROSE_7238 are exactly identical! WARNING: Sequences sp_P05130_KPC1_DROME_7227 and tr_A0A1W4VE13_A0A1W4VE13_DROFC_30025 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_G3R8H1_G3R8H1_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_H2P6C3_H2P6C3_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_K7CBH8_K7CBH8_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and sp_Q02156_KPCE_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_U3FXN4_U3FXN4_CALJA_9483 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_A0A2R9AUU7_A0A2R9AUU7_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QL13_G3QL13_GORGO_9595 and tr_K7DA70_K7DA70_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QZ70_G3QZ70_GORGO_9595 and tr_H2Q8F2_H2Q8F2_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QZ70_G3QZ70_GORGO_9595 and tr_A0A2R9AS27_A0A2R9AS27_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3R5W0_G3R5W0_GORGO_9595 and tr_H2QAS6_H2QAS6_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R5W0_G3R5W0_GORGO_9595 and tr_F7I4K8_F7I4K8_CALJA_9483 are exactly identical! WARNING: Sequences tr_G3R5W0_G3R5W0_GORGO_9595 and tr_A0A2I3N8C1_A0A2I3N8C1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3R5W0_G3R5W0_GORGO_9595 and tr_A0A2K5L6M3_A0A2K5L6M3_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3R5W0_G3R5W0_GORGO_9595 and tr_A0A2K6B2U4_A0A2K6B2U4_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3RCJ3_G3RCJ3_GORGO_9595 and sp_Q04759_KPCT_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and sp_P05696_KPCA_RAT_10116 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_U3BPE0_U3BPE0_CALJA_9483 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_A0A096NTX9_A0A096NTX9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_A0A1U7QLD2_A0A1U7QLD2_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_A0A2K5LMT6_A0A2K5LMT6_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_A0A2K6CYI9_A0A2K6CYI9_MACNE_9545 are exactly identical! WARNING: Sequences tr_F1PMX4_F1PMX4_CANLF_9615 and tr_G1LHE1_G1LHE1_AILME_9646 are exactly identical! WARNING: Sequences tr_F1PMX4_F1PMX4_CANLF_9615 and tr_A0A2I2USU9_A0A2I2USU9_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A2I3RQJ8_A0A2I3RQJ8_PANTR_9598 and sp_P41743_KPCI_HUMAN_9606 are exactly identical! WARNING: Sequences tr_F6W6Q5_F6W6Q5_HORSE_9796 and tr_F1MJX9_F1MJX9_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A158NMP4_A0A158NMP4_ATTCE_12957 and tr_F4X312_F4X312_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158P293_A0A158P293_ATTCE_12957 and tr_A0A151I099_A0A151I099_9HYME_520822 are exactly identical! WARNING: Sequences tr_H0WI40_H0WI40_OTOGA_30611 and tr_K9J4L8_K9J4L8_PIG_9823 are exactly identical! WARNING: Sequences tr_H0WI40_H0WI40_OTOGA_30611 and tr_M3WEI7_M3WEI7_FELCA_9685 are exactly identical! WARNING: Sequences sp_P05771_KPCB_HUMAN_9606 and tr_F7BYI4_F7BYI4_MACMU_9544 are exactly identical! WARNING: Sequences sp_P05771_KPCB_HUMAN_9606 and tr_A0A0D9R2T7_A0A0D9R2T7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7BIC2_F7BIC2_MACMU_9544 and tr_G7PM48_G7PM48_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7BIC2_F7BIC2_MACMU_9544 and tr_A0A2I3LQL3_A0A2I3LQL3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7BIC2_F7BIC2_MACMU_9544 and tr_A0A2K5NF50_A0A2K5NF50_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7BIC2_F7BIC2_MACMU_9544 and tr_A0A2K6BZK0_A0A2K6BZK0_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_G7PAH0_G7PAH0_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A096NVI4_A0A096NVI4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A2K5KX36_A0A2K5KX36_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A2K6DL10_A0A2K6DL10_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A2K6A797_A0A2K6A797_MANLE_9568 are exactly identical! WARNING: Sequences tr_H9EU39_H9EU39_MACMU_9544 and tr_G7NZU6_G7NZU6_MACFA_9541 are exactly identical! WARNING: Sequences tr_H9EU39_H9EU39_MACMU_9544 and tr_A0A096NG19_A0A096NG19_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H9EU39_H9EU39_MACMU_9544 and tr_A0A0D9RKU2_A0A0D9RKU2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H9EU39_H9EU39_MACMU_9544 and tr_A0A2K5MBX9_A0A2K5MBX9_CERAT_9531 are exactly identical! WARNING: Sequences tr_H9EU39_H9EU39_MACMU_9544 and tr_A0A2K6A1K4_A0A2K6A1K4_MANLE_9568 are exactly identical! WARNING: Sequences tr_G0P7F0_G0P7F0_CAEBE_135651 and tr_G0P9H6_G0P9H6_CAEBE_135651 are exactly identical! WARNING: Sequences tr_F1MDC9_F1MDC9_BOVIN_9913 and tr_A0A2U4BY98_A0A2U4BY98_TURTR_9739 are exactly identical! WARNING: Sequences tr_F1MDC9_F1MDC9_BOVIN_9913 and tr_A0A384ARX2_A0A384ARX2_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A096N5E6_A0A096N5E6_PAPAN_9555 and tr_A0A2K5LZ26_A0A2K5LZ26_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096N5E6_A0A096N5E6_PAPAN_9555 and tr_A0A2K6DWH7_A0A2K6DWH7_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A091IPB1_A0A091IPB1_EGRGA_188379 and tr_A0A087RG88_A0A087RG88_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091IPB1_A0A091IPB1_EGRGA_188379 and tr_A0A099ZUS4_A0A099ZUS4_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091IPB1_A0A091IPB1_EGRGA_188379 and tr_A0A091HI65_A0A091HI65_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091K566_A0A091K566_EGRGA_188379 and tr_A0A0A0A134_A0A0A0A134_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091WIS6_A0A091WIS6_OPIHO_30419 and tr_A0A091FFE0_A0A091FFE0_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A2I0MAM9_A0A2I0MAM9_COLLI_8932 and tr_A0A1V4JJL9_A0A1V4JJL9_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0V0W3K1_A0A0V0W3K1_9BILA_92179 and tr_A0A0V1LHX8_A0A0V1LHX8_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0W3K1_A0A0V0W3K1_9BILA_92179 and tr_A0A0V1NKY3_A0A0V1NKY3_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0W3K1_A0A0V0W3K1_9BILA_92179 and tr_A0A0V0TN94_A0A0V0TN94_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A226MNJ8_A0A226MNJ8_CALSU_9009 and tr_A0A226PS60_A0A226PS60_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0QNY7_A0A2D0QNY7_ICTPU_7998 and tr_A0A2D0QPR0_A0A2D0QPR0_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U4C8G1_A0A2U4C8G1_TURTR_9739 and tr_A0A2Y9SNU2_A0A2Y9SNU2_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 67 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/4_raxmlng_ancestral/P24723.raxml.reduced.phy Alignment comprises 1 partitions and 683 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 683 Gaps: 19.13 % Invariant sites: 0.15 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/4_raxmlng_ancestral/P24723.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/3_mltree/P24723.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 171 / 13680 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -168912.910137 [00:00:00 -168912.910137] Initial branch length optimization [00:00:01 -161198.205477] Model parameter optimization (eps = 0.100000) [00:00:37] Tree #1, final logLikelihood: -160862.675382 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.224655,0.259668) (0.226139,0.442824) (0.313321,0.972610) (0.235885,2.275620) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/4_raxmlng_ancestral/P24723.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/4_raxmlng_ancestral/P24723.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/4_raxmlng_ancestral/P24723.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P24723/4_raxmlng_ancestral/P24723.raxml.log Analysis started: 04-Jun-2021 14:10:34 / finished: 04-Jun-2021 14:11:18 Elapsed time: 43.765 seconds