RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 06-Jul-2021 17:28:17 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/2_msa/P21579_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579 --seed 2 --threads 3 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (3 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/2_msa/P21579_trimmed_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 130 sites WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and sp_P21521_SY65_DROME_7227 are exactly identical! WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and tr_B4I2Q5_B4I2Q5_DROSE_7238 are exactly identical! WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and tr_Q29KW1_Q29KW1_DROPS_46245 are exactly identical! WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and tr_B4MYZ3_B4MYZ3_DROWI_7260 are exactly identical! WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and tr_B3N1B0_B3N1B0_DROAN_7217 are exactly identical! WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and tr_B4GSQ9_B4GSQ9_DROPE_7234 are exactly identical! WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and tr_A0A0L0BRY9_A0A0L0BRY9_LUCCU_7375 are exactly identical! WARNING: Sequences tr_B4Q8K7_B4Q8K7_DROSI_7240 and tr_A0A1W4V5W1_A0A1W4V5W1_DROFC_30025 are exactly identical! WARNING: Sequences tr_E9FTC0_E9FTC0_DAPPU_6669 and tr_A0A164LM42_A0A164LM42_9CRUS_35525 are exactly identical! WARNING: Sequences tr_E1ZWH9_E1ZWH9_CAMFO_104421 and tr_F4WQP4_F4WQP4_ACREC_103372 are exactly identical! WARNING: Sequences tr_E1ZWH9_E1ZWH9_CAMFO_104421 and tr_E2BYG2_E2BYG2_HARSA_610380 are exactly identical! WARNING: Sequences tr_E1ZWH9_E1ZWH9_CAMFO_104421 and tr_A0A026WLT2_A0A026WLT2_OOCBI_2015173 are exactly identical! WARNING: Sequences tr_E1ZWH9_E1ZWH9_CAMFO_104421 and tr_A0A151X3W5_A0A151X3W5_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A2R8RWI1_A0A2R8RWI1_DANRE_7955 and tr_I3IS33_I3IS33_DANRE_7955 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_G1MS64_G1MS64_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_H0YST4_H0YST4_TAEGU_59729 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_U3JIQ6_U3JIQ6_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_U3IU54_U3IU54_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A0Q3LXM4_A0A0Q3LXM4_AMAAE_12930 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A091F0Z0_A0A091F0Z0_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A091JK50_A0A091JK50_EGRGA_188379 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A091W180_A0A091W180_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A087R725_A0A087R725_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A093H725_A0A093H725_STRCA_441894 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A091WNU9_A0A091WNU9_OPIHO_30419 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A099Z6P6_A0A099Z6P6_TINGU_94827 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A091G0E4_A0A091G0E4_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A0A0A8D2_A0A0A0A8D2_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A2I0LZU1_A0A2I0LZU1_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A093GCF9_A0A093GCF9_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A091ICE4_A0A091ICE4_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A1V4KG22_A0A1V4KG22_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A218USD7_A0A218USD7_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A226NHV1_A0A226NHV1_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5P3K5_A0A1D5P3K5_CHICK_9031 and tr_A0A226NXR2_A0A226NXR2_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A1D5P4N8_A0A1D5P4N8_CHICK_9031 and tr_G1N011_G1N011_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5P4N8_A0A1D5P4N8_CHICK_9031 and tr_U3KBM3_U3KBM3_FICAL_59894 are exactly identical! WARNING: Sequences tr_A0A1D5P4N8_A0A1D5P4N8_CHICK_9031 and tr_U3IGK1_U3IGK1_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5P4N8_A0A1D5P4N8_CHICK_9031 and tr_A0A091H2E2_A0A091H2E2_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5P4N8_A0A1D5P4N8_CHICK_9031 and tr_A0A218UVG4_A0A218UVG4_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A1D5P4N8_A0A1D5P4N8_CHICK_9031 and tr_A0A226MQ48_A0A226MQ48_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A1D5P4N8_A0A1D5P4N8_CHICK_9031 and tr_A0A226NUL0_A0A226NUL0_COLVI_9014 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_G1NET9_G1NET9_MELGA_9103 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_K7FJP9_K7FJP9_PELSI_13735 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_Q2XQH2_Q2XQH2_TAEGU_59729 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_U3K7D1_U3K7D1_FICAL_59894 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_U3J5L0_U3J5L0_ANAPL_8839 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A151PGA3_A0A151PGA3_ALLMI_8496 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A0Q3UPX3_A0A0Q3UPX3_AMAAE_12930 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A091EKK4_A0A091EKK4_CORBR_85066 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A091JQ71_A0A091JQ71_EGRGA_188379 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A093SHV8_A0A093SHV8_9PASS_328815 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A091UXT6_A0A091UXT6_NIPNI_128390 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A087RD12_A0A087RD12_APTFO_9233 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A093HA34_A0A093HA34_STRCA_441894 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A091WHN1_A0A091WHN1_OPIHO_30419 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A091G777_A0A091G777_9AVES_55661 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A0A0B1G8_A0A0A0B1G8_CHAVO_50402 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A2I0LV01_A0A2I0LV01_COLLI_8932 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A091IG62_A0A091IG62_CALAN_9244 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A1U7RVS2_A0A1U7RVS2_ALLSI_38654 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A1V4KMV0_A0A1V4KMV0_PATFA_372326 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A218URZ9_A0A218URZ9_9PASE_299123 are exactly identical! WARNING: Sequences sp_P47191_SYT1_CHICK_9031 and tr_A0A226NNK5_A0A226NNK5_CALSU_9009 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_M3Z191_M3Z191_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G1QYR5_G1QYR5_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G1P5H1_G1P5H1_MYOLU_59463 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G3HZ13_G3HZ13_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G3S3Z1_G3S3Z1_GORGO_9595 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_H2NI51_H2NI51_PONAB_9601 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and sp_Q5R4J5_SYT1_PONAB_9601 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G1U4K2_G1U4K2_RABIT_9986 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_F1PNW4_F1PNW4_CANLF_9615 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_H2R3R2_H2R3R2_PANTR_9598 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_F7CH73_F7CH73_ORNAN_9258 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_F7FJ84_F7FJ84_MONDO_13616 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_F6R134_F6R134_HORSE_9796 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_W5Q083_W5Q083_SHEEP_9940 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and sp_P21707_SYT1_RAT_10116 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_I3MUB7_I3MUB7_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_H0X1L2_H0X1L2_OTOGA_30611 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_H0UXN2_H0UXN2_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and sp_P21579_SYT1_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_F7GFB1_F7GFB1_MACMU_9544 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G5C9J0_G5C9J0_HETGA_10181 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G3TB57_G3TB57_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G3W694_G3W694_SARHA_9305 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_U3CTJ2_U3CTJ2_CALJA_9483 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_F1RYK1_F1RYK1_PIG_9823 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G1M426_G1M426_AILME_9646 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_G7PIJ5_G7PIJ5_MACFA_9541 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and sp_P48018_SYT1_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_L5JVM1_L5JVM1_PTEAL_9402 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A096MSC6_A0A096MSC6_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A091D6J5_A0A091D6J5_FUKDA_885580 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A0D9QVE3_A0A0D9QVE3_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A1S2ZWL2_A0A1S2ZWL2_ERIEU_9365 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A1S3FH29_A0A1S3FH29_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A1U7TGJ5_A0A1U7TGJ5_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A1U8BIL9_A0A1U8BIL9_MESAU_10036 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2K5M2T0_A0A2K5M2T0_CERAT_9531 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2K6BM63_A0A2K6BM63_MACNE_9545 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2K5Y7K4_A0A2K5Y7K4_MANLE_9568 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2R9A4D0_A0A2R9A4D0_PANPA_9597 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2U3WFF7_A0A2U3WFF7_ODORO_9708 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2U3Z0W3_A0A2U3Z0W3_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2Y9E1L1_A0A2Y9E1L1_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2Y9IQN1_A0A2Y9IQN1_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2Y9M3I5_A0A2Y9M3I5_DELLE_9749 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A2Y9SMH3_A0A2Y9SMH3_PHYCD_9755 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A384DNK3_A0A384DNK3_URSMA_29073 are exactly identical! WARNING: Sequences sp_P46096_SYT1_MOUSE_10090 and tr_A0A384B5V7_A0A384B5V7_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q9R0N7_SYT7_MOUSE_10090 and tr_G3IEQ8_G3IEQ8_CRIGR_10029 are exactly identical! WARNING: Sequences sp_Q9R0N7_SYT7_MOUSE_10090 and tr_A0A1U8C083_A0A1U8C083_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_M3Y218_M3Y218_MUSPF_9669 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_G3HQH6_G3HQH6_CRIGR_10029 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_F1PQ58_F1PQ58_CANLF_9615 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_F6R0R1_F6R0R1_HORSE_9796 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_W5QFB3_W5QFB3_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and sp_Q62746_SYT6_RAT_10116 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_I3MXX7_I3MXX7_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_H0XA42_H0XA42_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A286XMW0_A0A286XMW0_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and sp_Q5T7P8_SYT6_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_G5ATE2_G5ATE2_HETGA_10181 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_G3UFL2_G3UFL2_LOXAF_9785 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_F7CIJ5_F7CIJ5_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A287A9R7_A0A287A9R7_PIG_9823 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_G1L1J3_G1L1J3_AILME_9646 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_E1BGL9_E1BGL9_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A091DGY7_A0A091DGY7_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A1S3WKC5_A0A1S3WKC5_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A3Q0E2D5_A0A3Q0E2D5_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A1U7QX43_A0A1U7QX43_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A2R9AV32_A0A2R9AV32_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A2Y9J041_A0A2Y9J041_ENHLU_391180 are exactly identical! WARNING: Sequences sp_Q9R0N8_SYT6_MOUSE_10090 and tr_A0A384CMA9_A0A384CMA9_URSMA_29073 are exactly identical! WARNING: Sequences sp_Q9R0N9_SYT9_MOUSE_10090 and sp_Q925C0_SYT9_RAT_10116 are exactly identical! WARNING: Sequences tr_M3Y8J1_M3Y8J1_MUSPF_9669 and tr_E2QT50_E2QT50_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3Y8J1_M3Y8J1_MUSPF_9669 and tr_A0A2Y9IHN5_A0A2Y9IHN5_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YG88_M3YG88_MUSPF_9669 and tr_A0A2Y9KV18_A0A2Y9KV18_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2I3HVJ8_A0A2I3HVJ8_NOMLE_61853 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G3H3M3_G3H3M3_CRIGR_10029 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G3QPB7_G3QPB7_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_H2N452_H2N452_PONAB_9601 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G1U765_G1U765_RABIT_9986 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2J8QWL9_A0A2J8QWL9_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_F6WM83_F6WM83_MONDO_13616 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and sp_P29101_SYT2_RAT_10116 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_I3MF66_I3MF66_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_H0WJJ6_H0WJJ6_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_H0V0J8_H0V0J8_CAVPO_10141 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and sp_Q8N9I0_SYT2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_F6XQZ0_F6XQZ0_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G5B382_G5B382_HETGA_10181 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G3TKL1_G3TKL1_LOXAF_9785 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G3WNY7_G3WNY7_SARHA_9305 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_U3D3N3_U3D3N3_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_F1S5A0_F1S5A0_PIG_9823 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G1M056_G1M056_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G7NWD9_G7NWD9_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_G5E6N8_G5E6N8_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A337S2H8_A0A337S2H8_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A096NPR1_A0A096NPR1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A091D2G8_A0A091D2G8_FUKDA_885580 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A0D9RNU7_A0A0D9RNU7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A1S2ZNM6_A0A1S2ZNM6_ERIEU_9365 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A1S3F8E3_A0A1S3F8E3_DIPOR_10020 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A3Q0DFQ2_A0A3Q0DFQ2_TARSY_1868482 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A1U8BZ08_A0A1U8BZ08_MESAU_10036 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2K5NYD0_A0A2K5NYD0_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2K6EAW5_A0A2K6EAW5_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2K5XZG2_A0A2K5XZG2_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2R9BB69_A0A2R9BB69_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2U4C6Q1_A0A2U4C6Q1_TURTR_9739 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2U3VED5_A0A2U3VED5_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2U3Y7L5_A0A2U3Y7L5_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2Y9DJG8_A0A2Y9DJG8_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2Y9JU44_A0A2Y9JU44_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A2Y9MF54_A0A2Y9MF54_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3YIC8_M3YIC8_MUSPF_9669 and tr_A0A384BLB6_A0A384BLB6_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_G3RUH1_G3RUH1_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_H2ND77_H2ND77_PONAB_9601 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A2I3S3Y2_A0A2I3S3Y2_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_F6U816_F6U816_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and sp_O43581_SYT7_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A1D5RJ25_A0A1D5RJ25_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A2R8MQJ3_A0A2R8MQJ3_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_G1MDY9_G1MDY9_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_G7PPX7_G7PPX7_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A096MPA7_A0A096MPA7_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A0D9R290_A0A0D9R290_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A2K6EAT1_A0A2K6EAT1_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A2K5YPR0_A0A2K5YPR0_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A2R9CJ93_A0A2R9CJ93_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A2U3WMA1_A0A2U3WMA1_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YRT3_M3YRT3_MUSPF_9669 and tr_A0A2Y9JMX7_A0A2Y9JMX7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_H2MDR8_H2MDR8_ORYLA_8090 and tr_I3KJU5_I3KJU5_ORENI_8128 are exactly identical! WARNING: Sequences tr_B4JQV9_B4JQV9_DROGR_7222 and tr_B4LV77_B4LV77_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4JQV9_B4JQV9_DROGR_7222 and tr_A0A0Q9X5I6_A0A0Q9X5I6_DROMO_7230 are exactly identical! WARNING: Sequences tr_G1P1A1_G1P1A1_MYOLU_59463 and tr_A0A1S3A1F3_A0A1S3A1F3_ERIEU_9365 are exactly identical! WARNING: Sequences tr_G1PQI8_G1PQI8_MYOLU_59463 and tr_W5QAV3_W5QAV3_SHEEP_9940 are exactly identical! WARNING: Sequences tr_G3I4T0_G3I4T0_CRIGR_10029 and tr_A0A3Q0DEH8_A0A3Q0DEH8_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A2J8U8Z9_A0A2J8U8Z9_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_E2R521_E2R521_CANLF_9615 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A2J8J1B3_A0A2J8J1B3_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_F6TAQ3_F6TAQ3_HORSE_9796 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_H0XNC5_H0XNC5_OTOGA_30611 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and sp_Q9BQG1_SYT3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_G3TP65_G3TP65_LOXAF_9785 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_U3DPW9_U3DPW9_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_F1RH13_F1RH13_PIG_9823 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_G1M2R5_G1M2R5_AILME_9646 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_G7PYE9_G7PYE9_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_E1BJ13_E1BJ13_BOVIN_9913 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_L5L449_L5L449_PTEAL_9402 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_M3WNT1_M3WNT1_FELCA_9685 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A0A0MVP0_A0A0A0MVP0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A0D9S4W8_A0A0D9S4W8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A2K5LZ34_A0A2K5LZ34_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A2R9BWD3_A0A2R9BWD3_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A2U3WLZ8_A0A2U3WLZ8_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A2Y9DWI9_A0A2Y9DWI9_TRIMA_127582 are exactly identical! WARNING: Sequences tr_A0A2I2YRH5_A0A2I2YRH5_GORGO_9595 and tr_A0A2Y9L0S9_A0A2Y9L0S9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_G3R0Z1_G3R0Z1_GORGO_9595 and tr_H2P066_H2P066_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3R0Z1_G3R0Z1_GORGO_9595 and tr_A0A2J8IWZ5_A0A2J8IWZ5_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3R0Z1_G3R0Z1_GORGO_9595 and sp_O00445_SYT5_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3R0Z1_G3R0Z1_GORGO_9595 and tr_A0A2R9AJ92_A0A2R9AJ92_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_H2Q338_H2Q338_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_I3MEZ0_I3MEZ0_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_H0WUX0_H0WUX0_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and sp_Q86SS6_SYT9_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_F7BYV9_F7BYV9_CALJA_9483 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_A0A2I3LF68_A0A2I3LF68_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_A0A1S3G7Z0_A0A1S3G7Z0_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_A0A1U7UIP1_A0A1U7UIP1_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_A0A3Q0CZZ9_A0A3Q0CZZ9_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_A0A2K5KW82_A0A2K5KW82_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_A0A2K5Y4C6_A0A2K5Y4C6_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3RLQ8_G3RLQ8_GORGO_9595 and tr_A0A2R9C6N3_A0A2R9C6N3_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and sp_Q5RCK6_SYT10_PONAB_9601 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_I3NHC1_I3NHC1_ICTTR_43179 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_F7G8E4_F7G8E4_MACMU_9544 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_G7PHL1_G7PHL1_MACFA_9541 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_A0A096NEP0_A0A096NEP0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_A0A0D9R4R8_A0A0D9R4R8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_A0A1U7TIX3_A0A1U7TIX3_TARSY_1868482 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_A0A2K5M2K2_A0A2K5M2K2_CERAT_9531 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_A0A2K6DPS7_A0A2K6DPS7_MACNE_9545 are exactly identical! WARNING: Sequences tr_H2NGY5_H2NGY5_PONAB_9601 and tr_A0A2K5XB34_A0A2K5XB34_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_H0ZMQ2_H0ZMQ2_TAEGU_59729 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_U3K3Y2_U3K3Y2_FICAL_59894 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A0Q3P1Y8_A0A0Q3P1Y8_AMAAE_12930 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A091EXF2_A0A091EXF2_CORBR_85066 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A091WLG7_A0A091WLG7_OPIHO_30419 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A099YW27_A0A099YW27_TINGU_94827 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A0A0ALS7_A0A0A0ALS7_CHAVO_50402 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A093GC57_A0A093GC57_DRYPU_118200 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A218V1J3_A0A218V1J3_9PASE_299123 are exactly identical! WARNING: Sequences tr_G1NKR5_G1NKR5_MELGA_9103 and tr_A0A226MP97_A0A226MP97_CALSU_9009 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_F1Q293_F1Q293_CANLF_9615 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_W5PUJ6_W5PUJ6_SHEEP_9940 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A287D7K9_A0A287D7K9_ICTTR_43179 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_H0XR59_H0XR59_OTOGA_30611 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A287AWQ2_A0A287AWQ2_PIG_9823 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_F1N4J4_F1N4J4_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_L5KR99_L5KR99_PTEAL_9402 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A1S2ZY80_A0A1S2ZY80_ERIEU_9365 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A1S3G6X6_A0A1S3G6X6_DIPOR_10020 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A3Q0DN80_A0A3Q0DN80_TARSY_1868482 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A2Y9PKS2_A0A2Y9PKS2_DELLE_9749 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A2Y9TI06_A0A2Y9TI06_PHYCD_9755 are exactly identical! WARNING: Sequences tr_G1THD6_G1THD6_RABIT_9986 and tr_A0A383ZHH7_A0A383ZHH7_BALAS_310752 are exactly identical! WARNING: Sequences tr_B5DRX8_B5DRX8_DROPS_46245 and tr_B4H863_B4H863_DROPE_7234 are exactly identical! WARNING: Sequences tr_B5DRX8_B5DRX8_DROPS_46245 and tr_B4MEY0_B4MEY0_DROVI_7244 are exactly identical! WARNING: Sequences tr_F1PKU1_F1PKU1_CANLF_9615 and tr_W5Q3L1_W5Q3L1_SHEEP_9940 are exactly identical! WARNING: Sequences tr_F1PKU1_F1PKU1_CANLF_9615 and tr_G3SW50_G3SW50_LOXAF_9785 are exactly identical! WARNING: Sequences tr_F1PKU1_F1PKU1_CANLF_9615 and tr_F1MVI4_F1MVI4_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F1PKU1_F1PKU1_CANLF_9615 and tr_M3W3P0_M3W3P0_FELCA_9685 are exactly identical! WARNING: Sequences tr_F1PKU1_F1PKU1_CANLF_9615 and tr_A0A2U3YPT0_A0A2U3YPT0_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F1PKU1_F1PKU1_CANLF_9615 and tr_A0A2Y9G151_A0A2Y9G151_TRIMA_127582 are exactly identical! WARNING: Sequences tr_F1PKU1_F1PKU1_CANLF_9615 and tr_A0A384BII1_A0A384BII1_URSMA_29073 are exactly identical! WARNING: Sequences tr_A0A2I3SAD1_A0A2I3SAD1_PANTR_9598 and tr_A0A2R9BPK1_A0A2R9BPK1_PANPA_9597 are exactly identical! WARNING: Sequences tr_F7F104_F7F104_MONDO_13616 and tr_G3VKW7_G3VKW7_SARHA_9305 are exactly identical! WARNING: Sequences tr_B0WCF7_B0WCF7_CULQU_7176 and tr_Q17NH1_Q17NH1_AEDAE_7159 are exactly identical! WARNING: Sequences sp_P47861_SYT5_RAT_10116 and tr_A0A1U7RCC3_A0A1U7RCC3_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A3B5QMU4_A0A3B5QMU4_XIPMA_8083 and tr_A0A087XEW2_A0A087XEW2_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5QMU4_A0A3B5QMU4_XIPMA_8083 and tr_A0A2I4CPA5_A0A2I4CPA5_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B5R0K7_A0A3B5R0K7_XIPMA_8083 and tr_A0A096M092_A0A096M092_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AQ05_M4AQ05_XIPMA_8083 and tr_A0A087XPW3_A0A087XPW3_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A088AT06_A0A088AT06_APIME_7460 and tr_A0A2A3EG78_A0A2A3EG78_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A088AU72_A0A088AU72_APIME_7460 and tr_A0A0M9A312_A0A0M9A312_9HYME_166423 are exactly identical! WARNING: Sequences tr_A0A158NE18_A0A158NE18_ATTCE_12957 and tr_F4X438_F4X438_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NE18_A0A158NE18_ATTCE_12957 and tr_A0A151WS27_A0A151WS27_9HYME_64791 are exactly identical! WARNING: Sequences tr_A0A158NE18_A0A158NE18_ATTCE_12957 and tr_A0A151ISN2_A0A151ISN2_9HYME_471704 are exactly identical! WARNING: Sequences tr_A0A158NE18_A0A158NE18_ATTCE_12957 and tr_A0A151I0A6_A0A151I0A6_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A158NE18_A0A158NE18_ATTCE_12957 and tr_A0A151JXM3_A0A151JXM3_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A158NE18_A0A158NE18_ATTCE_12957 and tr_A0A151IIL1_A0A151IIL1_9HYME_456900 are exactly identical! WARNING: Sequences tr_A0A158NE18_A0A158NE18_ATTCE_12957 and tr_A0A151IIM1_A0A151IIM1_9HYME_456900 are exactly identical! WARNING: Sequences tr_I3ITR5_I3ITR5_ORENI_8128 and tr_H3D539_H3D539_TETNG_99883 are exactly identical! WARNING: Sequences tr_I3JG30_I3JG30_ORENI_8128 and tr_H2V511_H2V511_TAKRU_31033 are exactly identical! WARNING: Sequences tr_I3JG30_I3JG30_ORENI_8128 and tr_H3CVH6_H3CVH6_TETNG_99883 are exactly identical! WARNING: Sequences tr_I3JTX3_I3JTX3_ORENI_8128 and tr_A0A087Y3P5_A0A087Y3P5_POEFO_48698 are exactly identical! WARNING: Sequences tr_I3KVW7_I3KVW7_ORENI_8128 and tr_H2U7M8_H2U7M8_TAKRU_31033 are exactly identical! WARNING: Sequences tr_H2ST41_H2ST41_TAKRU_31033 and tr_H3DF73_H3DF73_TETNG_99883 are exactly identical! WARNING: Sequences tr_H2ST41_H2ST41_TAKRU_31033 and tr_A0A2U9BVM2_A0A2U9BVM2_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2T962_H2T962_TAKRU_31033 and tr_A0A2U9BD08_A0A2U9BD08_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A286Y4C3_A0A286Y4C3_CAVPO_10141 and tr_G5AYF9_G5AYF9_HETGA_10181 are exactly identical! WARNING: Sequences tr_H0W0A4_H0W0A4_CAVPO_10141 and tr_G5B8T2_G5B8T2_HETGA_10181 are exactly identical! WARNING: Sequences tr_A0A0H5SPI7_A0A0H5SPI7_BRUMA_6279 and tr_A0A0N4TIW5_A0A0N4TIW5_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0H5SPI7_A0A0H5SPI7_BRUMA_6279 and tr_A0A0R3R0T2_A0A0R3R0T2_9BILA_42155 are exactly identical! WARNING: Sequences tr_A0A0K0JBL1_A0A0K0JBL1_BRUMA_6279 and tr_A0A0N4TYN5_A0A0N4TYN5_BRUPA_6280 are exactly identical! WARNING: Sequences tr_A0A0K0JBL1_A0A0K0JBL1_BRUMA_6279 and tr_A0A0R3RTN2_A0A0R3RTN2_9BILA_1147741 are exactly identical! WARNING: Sequences tr_A0A0K0JBL1_A0A0K0JBL1_BRUMA_6279 and tr_A0A1I7VCC3_A0A1I7VCC3_LOALO_7209 are exactly identical! WARNING: Sequences tr_A0A0K0JR16_A0A0K0JR16_BRUMA_6279 and tr_A0A0R3QK47_A0A0R3QK47_9BILA_42155 are exactly identical! WARNING: Sequences tr_A0A1D5R7T9_A0A1D5R7T9_MACMU_9544 and tr_G7NW80_G7NW80_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A1D5R7T9_A0A1D5R7T9_MACMU_9544 and tr_A0A2I3LWE8_A0A2I3LWE8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A1D5R7T9_A0A1D5R7T9_MACMU_9544 and tr_A0A0D9S689_A0A0D9S689_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A1D5R7T9_A0A1D5R7T9_MACMU_9544 and tr_A0A2K5NCN7_A0A2K5NCN7_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A1D5R7T9_A0A1D5R7T9_MACMU_9544 and tr_A0A2K6CE51_A0A2K6CE51_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A1D5R7T9_A0A1D5R7T9_MACMU_9544 and tr_A0A2K5YNS8_A0A2K5YNS8_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7AI08_F7AI08_MACMU_9544 and tr_G7PYY4_G7PYY4_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7AI08_F7AI08_MACMU_9544 and tr_A0A0A0MWK6_A0A0A0MWK6_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7AI08_F7AI08_MACMU_9544 and tr_A0A0D9S5Y5_A0A0D9S5Y5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7AI08_F7AI08_MACMU_9544 and tr_A0A2K5MDX8_A0A2K5MDX8_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7AI08_F7AI08_MACMU_9544 and tr_A0A2K6DYL4_A0A2K6DYL4_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7AI08_F7AI08_MACMU_9544 and tr_A0A2K5XLY6_A0A2K5XLY6_MANLE_9568 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V0S6M9_A0A0V0S6M9_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V1CW84_A0A0V1CW84_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V0V2M3_A0A0V0V2M3_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V1LUX6_A0A0V1LUX6_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V1A9M5_A0A0V1A9M5_9BILA_990121 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V1FP42_A0A0V1FP42_TRIPS_6337 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V1NXH9_A0A0V1NXH9_9BILA_92180 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V1HR73_A0A0V1HR73_9BILA_268475 are exactly identical! WARNING: Sequences tr_E5SLZ5_E5SLZ5_TRISP_6334 and tr_A0A0V0UHU1_A0A0V0UHU1_9BILA_144512 are exactly identical! WARNING: Sequences tr_Q7PN22_Q7PN22_ANOGA_7165 and tr_A0A084VP08_A0A084VP08_ANOSI_74873 are exactly identical! WARNING: Sequences tr_W4YQF6_W4YQF6_STRPU_7668 and tr_W4YWY9_W4YWY9_STRPU_7668 are exactly identical! WARNING: Sequences tr_G3SSF4_G3SSF4_LOXAF_9785 and tr_A0A287BAW8_A0A287BAW8_PIG_9823 are exactly identical! WARNING: Sequences tr_H0YS04_H0YS04_TAEGU_59729 and tr_A0A218UJZ7_A0A218UJZ7_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0Z409_H0Z409_TAEGU_59729 and tr_U3K812_U3K812_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0Z409_H0Z409_TAEGU_59729 and tr_A0A218USB8_A0A218USB8_9PASE_299123 are exactly identical! WARNING: Sequences tr_G0NQX7_G0NQX7_CAEBE_135651 and tr_E3LQT9_E3LQT9_CAERE_31234 are exactly identical! WARNING: Sequences tr_G0NQX7_G0NQX7_CAEBE_135651 and tr_A8XCL2_A8XCL2_CAEBR_6238 are exactly identical! WARNING: Sequences tr_G0NQX7_G0NQX7_CAEBE_135651 and tr_A0A261BMR8_A0A261BMR8_9PELO_1503980 are exactly identical! WARNING: Sequences tr_G0NQX7_G0NQX7_CAEBE_135651 and tr_A0A2G5V0L2_A0A2G5V0L2_9PELO_1611254 are exactly identical! WARNING: Sequences tr_E3M004_E3M004_CAERE_31234 and tr_A0A1I7T4Y0_A0A1I7T4Y0_9PELO_1561998 are exactly identical! WARNING: Sequences tr_A8X273_A8X273_CAEBR_6238 and tr_A0A2G5TDJ6_A0A2G5TDJ6_9PELO_1611254 are exactly identical! WARNING: Sequences tr_G1LA08_G1LA08_AILME_9646 and tr_M3W4F2_M3W4F2_FELCA_9685 are exactly identical! WARNING: Sequences tr_G1LA08_G1LA08_AILME_9646 and tr_A0A2U3W9U1_A0A2U3W9U1_ODORO_9708 are exactly identical! WARNING: Sequences tr_G1LA08_G1LA08_AILME_9646 and tr_A0A2U3Z1K3_A0A2U3Z1K3_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G1LA08_G1LA08_AILME_9646 and tr_A0A384DMJ3_A0A384DMJ3_URSMA_29073 are exactly identical! WARNING: Sequences tr_B3SBZ4_B3SBZ4_TRIAD_10228 and tr_A0A369RWB7_A0A369RWB7_9METZ_287889 are exactly identical! WARNING: Sequences tr_B3SBZ5_B3SBZ5_TRIAD_10228 and tr_A0A369RVW2_A0A369RVW2_9METZ_287889 are exactly identical! WARNING: Sequences tr_L5KYF4_L5KYF4_PTEAL_9402 and tr_A0A2Y9T842_A0A2Y9T842_PHYCD_9755 are exactly identical! WARNING: Sequences tr_U3IGH9_U3IGH9_ANAPL_8839 and tr_A0A091JDX7_A0A091JDX7_EGRGA_188379 are exactly identical! WARNING: Sequences tr_U3IGH9_U3IGH9_ANAPL_8839 and tr_A0A091VX66_A0A091VX66_NIPNI_128390 are exactly identical! WARNING: Sequences tr_U3IGH9_U3IGH9_ANAPL_8839 and tr_A0A087RKB6_A0A087RKB6_APTFO_9233 are exactly identical! WARNING: Sequences tr_U3IGH9_U3IGH9_ANAPL_8839 and tr_A0A0A0B204_A0A0A0B204_CHAVO_50402 are exactly identical! WARNING: Sequences tr_U3IGH9_U3IGH9_ANAPL_8839 and tr_A0A093G2F2_A0A093G2F2_DRYPU_118200 are exactly identical! WARNING: Sequences tr_U3IT97_U3IT97_ANAPL_8839 and tr_A0A091J9P6_A0A091J9P6_EGRGA_188379 are exactly identical! WARNING: Sequences tr_U3IT97_U3IT97_ANAPL_8839 and tr_A0A087QPH7_A0A087QPH7_APTFO_9233 are exactly identical! WARNING: Sequences tr_U3IT97_U3IT97_ANAPL_8839 and tr_A0A091GKZ8_A0A091GKZ8_9AVES_55661 are exactly identical! WARNING: Sequences tr_U3IT97_U3IT97_ANAPL_8839 and tr_A0A0A0ANL6_A0A0A0ANL6_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A044UM23_A0A044UM23_ONCVO_6282 and tr_A0A182EN53_A0A182EN53_ONCOC_42157 are exactly identical! WARNING: Sequences tr_A0A0K0FCQ8_A0A0K0FCQ8_STRVS_75913 and tr_A0A0K0E4B1_A0A0K0E4B1_STRER_6248 are exactly identical! WARNING: Sequences tr_A0A0K0FCQ8_A0A0K0FCQ8_STRVS_75913 and tr_A0A0N5BC53_A0A0N5BC53_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A090LHP3_A0A090LHP3_STRRB_34506 and tr_A0A0N5BS92_A0A0N5BS92_STREA_174720 are exactly identical! WARNING: Sequences tr_A0A0R3X951_A0A0R3X951_HYDTA_6205 and tr_A0A0R3VSU8_A0A0R3VSU8_TAEAS_60517 are exactly identical! WARNING: Sequences tr_A0A151MBT3_A0A151MBT3_ALLMI_8496 and tr_A0A1U7RRJ1_A0A1U7RRJ1_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151N8Z6_A0A151N8Z6_ALLMI_8496 and tr_A0A1U7S2D1_A0A1U7S2D1_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151NID4_A0A151NID4_ALLMI_8496 and tr_A0A1U7RM90_A0A1U7RM90_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151NSQ7_A0A151NSQ7_ALLMI_8496 and tr_A0A1U7R008_A0A1U7R008_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091E8V1_A0A091E8V1_CORBR_85066 and tr_A0A093PY52_A0A093PY52_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A091IPG7_A0A091IPG7_EGRGA_188379 and tr_A0A087RJG5_A0A087RJG5_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A0N0PDY1_A0A0N0PDY1_PAPMA_76193 and tr_A0A194PUL4_A0A194PUL4_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A194R0U2_A0A194R0U2_PAPMA_76193 and tr_A0A194PHE8_A0A194PHE8_PAPXU_66420 are exactly identical! WARNING: Sequences tr_A0A091UY54_A0A091UY54_NIPNI_128390 and tr_A0A093GB32_A0A093GB32_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091UY54_A0A091UY54_NIPNI_128390 and tr_A0A226MMD6_A0A226MMD6_CALSU_9009 are exactly identical! WARNING: Sequences tr_A0A091UY54_A0A091UY54_NIPNI_128390 and tr_A0A226P0U9_A0A226P0U9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A0L7RAT9_A0A0L7RAT9_9HYME_597456 and tr_A0A154PM27_A0A154PM27_9HYME_178035 are exactly identical! WARNING: Sequences tr_A0A2I0LZQ2_A0A2I0LZQ2_COLLI_8932 and tr_A0A1V4KX64_A0A1V4KX64_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A2I0MK25_A0A2I0MK25_COLLI_8932 and tr_A0A1V4K839_A0A1V4K839_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V1CN79_A0A0V1CN79_TRIBR_45882 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V0X2N8_A0A0V0X2N8_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V0VP69_A0A0V0VP69_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V1L3W4_A0A0V1L3W4_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V1E2R8_A0A0V1E2R8_TRIPS_6337 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V1PA79_A0A0V1PA79_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V1HLV4_A0A0V1HLV4_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V0SDJ6_A0A0V0SDJ6_9BILA_6336 and tr_A0A0V0UA16_A0A0V0UA16_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A1S3HFT3_A0A1S3HFT3_LINUN_7574 and tr_A0A1S3HHD6_A0A1S3HHD6_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3K264_A0A1S3K264_LINUN_7574 and tr_A0A1S3K274_A0A1S3K274_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3K264_A0A1S3K264_LINUN_7574 and tr_A0A1S3K2I0_A0A1S3K2I0_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3K264_A0A1S3K264_LINUN_7574 and tr_A0A1S3K2U9_A0A1S3K2U9_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A1S3KV63_A0A1S3KV63_SALSA_8030 and tr_A0A1S3PUH4_A0A1S3PUH4_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3KV63_A0A1S3KV63_SALSA_8030 and tr_A0A060XJU0_A0A060XJU0_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3KVG1_A0A1S3KVG1_SALSA_8030 and tr_A0A1S3PUS3_A0A1S3PUS3_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3LE97_A0A1S3LE97_SALSA_8030 and tr_A0A060WEE6_A0A060WEE6_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3MGY4_A0A1S3MGY4_SALSA_8030 and tr_A0A060X6K5_A0A060X6K5_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3MGY4_A0A1S3MGY4_SALSA_8030 and tr_A0A060XJ16_A0A060XJ16_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3N085_A0A1S3N085_SALSA_8030 and tr_A0A1S3SH72_A0A1S3SH72_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3N085_A0A1S3N085_SALSA_8030 and tr_A0A060X841_A0A060X841_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3N0A8_A0A1S3N0A8_SALSA_8030 and tr_A0A1S3SHM2_A0A1S3SHM2_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3N0A8_A0A1S3N0A8_SALSA_8030 and tr_A0A060X188_A0A060X188_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3NFQ5_A0A1S3NFQ5_SALSA_8030 and tr_A0A060WGD1_A0A060WGD1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3P8P1_A0A1S3P8P1_SALSA_8030 and tr_A0A060Y4F8_A0A060Y4F8_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3PCR3_A0A1S3PCR3_SALSA_8030 and tr_A0A060X9Z4_A0A060X9Z4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3R8Q8_A0A1S3R8Q8_SALSA_8030 and tr_A0A060WYA7_A0A060WYA7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A2A2KC38_A0A2A2KC38_9BILA_2018661 and tr_A0A2A2LFW4_A0A2A2LFW4_9BILA_2018661 are exactly identical! WARNING: Sequences tr_A0A2D0QSW3_A0A2D0QSW3_ICTPU_7998 and tr_A0A2D0QTJ3_A0A2D0QTJ3_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RFM7_A0A2D0RFM7_ICTPU_7998 and tr_W5UAP9_W5UAP9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RVL3_A0A2D0RVL3_ICTPU_7998 and tr_A0A2D0RWH6_A0A2D0RWH6_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RVL3_A0A2D0RVL3_ICTPU_7998 and tr_A0A2D0RX54_A0A2D0RX54_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0T3U6_A0A2D0T3U6_ICTPU_7998 and tr_W5UJ63_W5UJ63_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U3V3F1_A0A2U3V3F1_TURTR_9739 and tr_A0A2Y9PGD2_A0A2Y9PGD2_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4A1B7_A0A2U4A1B7_TURTR_9739 and tr_A0A2Y9P395_A0A2Y9P395_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4A1B7_A0A2U4A1B7_TURTR_9739 and tr_A0A2Y9SAH2_A0A2Y9SAH2_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4BK99_A0A2U4BK99_TURTR_9739 and tr_A0A2Y9NCX3_A0A2Y9NCX3_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4BK99_A0A2U4BK99_TURTR_9739 and tr_A0A2Y9T1X0_A0A2Y9T1X0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4CF73_A0A2U4CF73_TURTR_9739 and tr_A0A2Y9MAW3_A0A2Y9MAW3_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4CF73_A0A2U4CF73_TURTR_9739 and tr_A0A2Y9SBN6_A0A2Y9SBN6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4CF73_A0A2U4CF73_TURTR_9739 and tr_A0A383ZCH5_A0A383ZCH5_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 423 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579.raxml.reduced.phy Alignment comprises 1 partitions and 130 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 130 / 130 Gaps: 0.36 % Invariant sites: 1.54 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579.raxml.rba Parallelization scheme autoconfig: 3 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 1001 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 130 / 10400 [00:00:00] Data distribution: max. searches per worker: 7 Starting ML tree search with 20 distinct starting trees [00:00:00 -163063.080831] Initial branch length optimization [00:00:02 -134830.468410] Model parameter optimization (eps = 10.000000) [00:00:27 -134090.229712] AUTODETECT spr round 1 (radius: 5) [00:02:29 -77917.165015] AUTODETECT spr round 2 (radius: 10) [00:04:35 -51091.535313] AUTODETECT spr round 3 (radius: 15) [00:06:51 -37444.569701] AUTODETECT spr round 4 (radius: 20) [00:09:32 -29830.678831] AUTODETECT spr round 5 (radius: 25) [00:12:22 -28885.970459] SPR radius for FAST iterations: 25 (autodetect) [00:12:22 -28885.970459] Model parameter optimization (eps = 3.000000) [00:12:43 -28753.231242] FAST spr round 1 (radius: 25) [00:14:33 -22863.386836] FAST spr round 2 (radius: 25) [00:16:12 -21772.821170] FAST spr round 3 (radius: 25) [00:17:39 -21409.027257] FAST spr round 4 (radius: 25) [00:19:00 -21274.194912] FAST spr round 5 (radius: 25) [00:20:27 -21214.177270] FAST spr round 6 (radius: 25) [00:21:49 -21214.174465] Model parameter optimization (eps = 1.000000) [00:22:00 -21209.565372] SLOW spr round 1 (radius: 5) [00:23:35 -21202.513059] SLOW spr round 2 (radius: 5) [00:25:11 -21201.507385] SLOW spr round 3 (radius: 5) [00:26:40 -21201.507176] SLOW spr round 4 (radius: 10) [00:28:18 -21164.066602] SLOW spr round 5 (radius: 5) [00:30:16 -21002.352476] SLOW spr round 6 (radius: 5) [00:32:02 -20993.549565] SLOW spr round 7 (radius: 5) [00:33:35 -20993.549146] SLOW spr round 8 (radius: 10) [00:35:11 -20993.397792] SLOW spr round 9 (radius: 5) [00:37:07 -20992.859480] SLOW spr round 10 (radius: 5) [00:38:48 -20992.859432] SLOW spr round 11 (radius: 10) [00:40:28 -20989.576153] SLOW spr round 12 (radius: 5) [00:42:21 -20989.575013] SLOW spr round 13 (radius: 10) [00:44:03 -20987.442496] SLOW spr round 14 (radius: 5) [00:45:52 -20987.190462] SLOW spr round 15 (radius: 5) [00:47:29 -20987.190452] SLOW spr round 16 (radius: 10) [00:49:03 -20987.190452] SLOW spr round 17 (radius: 15) [00:51:11 -20987.190452] SLOW spr round 18 (radius: 20) [00:54:18 -20987.190452] SLOW spr round 19 (radius: 25) [00:55:59] [worker #1] ML tree search #2, logLikelihood: -20986.680512 [00:58:18 -20987.190452] Model parameter optimization (eps = 0.100000) [00:58:23] [worker #0] ML tree search #1, logLikelihood: -20987.125847 [00:58:23 -162184.433912] Initial branch length optimization [00:58:26 -134426.728504] Model parameter optimization (eps = 10.000000) [00:58:57 -133662.314740] AUTODETECT spr round 1 (radius: 5) [01:00:59 -77828.477694] AUTODETECT spr round 2 (radius: 10) [01:03:02 -50094.296004] AUTODETECT spr round 3 (radius: 15) [01:05:19 -35300.599383] AUTODETECT spr round 4 (radius: 20) [01:07:44] [worker #2] ML tree search #3, logLikelihood: -20995.973049 [01:07:53 -29527.436629] AUTODETECT spr round 5 (radius: 25) [01:10:42 -26892.361023] SPR radius for FAST iterations: 25 (autodetect) [01:10:42 -26892.361023] Model parameter optimization (eps = 3.000000) [01:11:03 -26822.464484] FAST spr round 1 (radius: 25) [01:12:54 -22103.283863] FAST spr round 2 (radius: 25) [01:14:25 -21308.256637] FAST spr round 3 (radius: 25) [01:15:51 -21067.980268] FAST spr round 4 (radius: 25) [01:17:18 -21025.968960] FAST spr round 5 (radius: 25) [01:18:36 -21025.968753] Model parameter optimization (eps = 1.000000) [01:18:46 -21024.129206] SLOW spr round 1 (radius: 5) [01:20:18 -21013.039313] SLOW spr round 2 (radius: 5) [01:21:51 -21012.245628] SLOW spr round 3 (radius: 5) [01:23:19 -21012.245373] SLOW spr round 4 (radius: 10) [01:24:55 -20994.017862] SLOW spr round 5 (radius: 5) [01:26:49 -20990.134553] SLOW spr round 6 (radius: 5) [01:28:31 -20990.134473] SLOW spr round 7 (radius: 10) [01:30:08 -20990.113966] SLOW spr round 8 (radius: 15) [01:32:26 -20987.367184] SLOW spr round 9 (radius: 5) [01:34:24 -20987.367173] SLOW spr round 10 (radius: 10) [01:36:13 -20987.367173] SLOW spr round 11 (radius: 15) [01:38:23 -20987.367173] SLOW spr round 12 (radius: 20) [01:39:10] [worker #1] ML tree search #5, logLikelihood: -20998.980523 [01:41:43 -20987.367173] SLOW spr round 13 (radius: 25) [01:45:47 -20987.367173] Model parameter optimization (eps = 0.100000) [01:45:54] [worker #0] ML tree search #4, logLikelihood: -20987.311087 [01:45:54 -161560.099864] Initial branch length optimization [01:45:58 -133580.149935] Model parameter optimization (eps = 10.000000) [01:46:31 -132878.019699] AUTODETECT spr round 1 (radius: 5) [01:48:34 -77662.800315] AUTODETECT spr round 2 (radius: 10) [01:50:36 -50820.209444] AUTODETECT spr round 3 (radius: 15) [01:52:53 -35310.191884] AUTODETECT spr round 4 (radius: 20) [01:55:18 -27944.725773] AUTODETECT spr round 5 (radius: 25) [01:57:53 -26278.986005] SPR radius for FAST iterations: 25 (autodetect) [01:57:53 -26278.986005] Model parameter optimization (eps = 3.000000) [01:58:12 -26225.244310] FAST spr round 1 (radius: 25) [02:00:00 -21504.638653] FAST spr round 2 (radius: 25) [02:01:34 -21092.445473] FAST spr round 3 (radius: 25) [02:03:03 -21056.226222] FAST spr round 4 (radius: 25) [02:04:24 -21051.261389] FAST spr round 5 (radius: 25) [02:05:42 -21051.261076] Model parameter optimization (eps = 1.000000) [02:06:01 -21004.425121] SLOW spr round 1 (radius: 5) [02:07:34 -20995.957212] SLOW spr round 2 (radius: 5) [02:09:06 -20995.955549] SLOW spr round 3 (radius: 10) [02:10:45 -20993.730834] SLOW spr round 4 (radius: 5) [02:12:39 -20992.925749] SLOW spr round 5 (radius: 5) [02:14:23 -20992.281396] SLOW spr round 6 (radius: 5) [02:14:33] [worker #1] ML tree search #8, logLikelihood: -20983.533162 [02:16:00 -20992.281101] SLOW spr round 7 (radius: 10) [02:17:39 -20992.266713] SLOW spr round 8 (radius: 15) [02:19:09] [worker #2] ML tree search #6, logLikelihood: -20975.739225 [02:19:51 -20991.062218] SLOW spr round 9 (radius: 5) [02:21:53 -20990.147655] SLOW spr round 10 (radius: 5) [02:23:39 -20990.147574] SLOW spr round 11 (radius: 10) [02:25:22 -20990.147505] SLOW spr round 12 (radius: 15) [02:27:36 -20990.147467] SLOW spr round 13 (radius: 20) [02:30:59 -20990.147452] SLOW spr round 14 (radius: 25) [02:35:25 -20990.147451] Model parameter optimization (eps = 0.100000) [02:35:32] [worker #0] ML tree search #7, logLikelihood: -20990.083703 [02:35:32 -162014.542281] Initial branch length optimization [02:35:36 -134427.409666] Model parameter optimization (eps = 10.000000) [02:36:10 -133721.273783] AUTODETECT spr round 1 (radius: 5) [02:38:12 -77649.325747] AUTODETECT spr round 2 (radius: 10) [02:40:15 -47515.607233] AUTODETECT spr round 3 (radius: 15) [02:42:25 -35032.218862] AUTODETECT spr round 4 (radius: 20) [02:45:10 -29884.017031] AUTODETECT spr round 5 (radius: 25) [02:48:18 -28295.311903] SPR radius for FAST iterations: 25 (autodetect) [02:48:18 -28295.311903] Model parameter optimization (eps = 3.000000) [02:48:41 -28165.150277] FAST spr round 1 (radius: 25) [02:50:34 -21829.857703] FAST spr round 2 (radius: 25) [02:52:04 -21112.482295] FAST spr round 3 (radius: 25) [02:53:30 -21032.410452] FAST spr round 4 (radius: 25) [02:54:50 -21030.637664] FAST spr round 5 (radius: 25) [02:56:08 -21028.609136] FAST spr round 6 (radius: 25) [02:57:27 -21027.088101] FAST spr round 7 (radius: 25) [02:58:44 -21027.088096] Model parameter optimization (eps = 1.000000) [02:58:55 -21022.991340] SLOW spr round 1 (radius: 5) [03:00:27 -21015.435723] SLOW spr round 2 (radius: 5) [03:01:59 -21014.674298] SLOW spr round 3 (radius: 5) [03:03:27 -21014.673987] SLOW spr round 4 (radius: 10) [03:03:58] [worker #1] ML tree search #11, logLikelihood: -20989.673007 [03:05:03 -21014.673866] SLOW spr round 5 (radius: 15) [03:07:20 -21013.677604] SLOW spr round 6 (radius: 5) [03:09:22 -21009.892531] SLOW spr round 7 (radius: 5) [03:11:09 -21008.160190] SLOW spr round 8 (radius: 5) [03:12:50 -21008.160057] SLOW spr round 9 (radius: 10) [03:14:25 -21008.160049] SLOW spr round 10 (radius: 15) [03:16:39 -21008.160045] SLOW spr round 11 (radius: 20) [03:19:50 -21008.160044] SLOW spr round 12 (radius: 25) [03:24:02 -21008.160044] Model parameter optimization (eps = 0.100000) [03:24:10] [worker #0] ML tree search #10, logLikelihood: -21007.986951 [03:24:10 -161478.777739] Initial branch length optimization [03:24:13 -133520.537459] Model parameter optimization (eps = 10.000000) [03:24:45 -132875.910803] AUTODETECT spr round 1 (radius: 5) [03:27:05 -79274.048046] AUTODETECT spr round 2 (radius: 10) [03:29:27 -48923.033794] AUTODETECT spr round 3 (radius: 15) [03:30:41] [worker #2] ML tree search #9, logLikelihood: -20984.063909 [03:32:00 -36021.219814] AUTODETECT spr round 4 (radius: 20) [03:34:53 -29560.257538] AUTODETECT spr round 5 (radius: 25) [03:38:08 -26760.485152] SPR radius for FAST iterations: 25 (autodetect) [03:38:08 -26760.485152] Model parameter optimization (eps = 3.000000) [03:38:40 -26644.839687] FAST spr round 1 (radius: 25) [03:40:44 -21680.111530] FAST spr round 2 (radius: 25) [03:42:34 -21054.321112] FAST spr round 3 (radius: 25) [03:44:18 -21013.121119] FAST spr round 4 (radius: 25) [03:45:56 -21003.818219] FAST spr round 5 (radius: 25) [03:47:32 -21003.145134] FAST spr round 6 (radius: 25) [03:49:10 -21003.145127] Model parameter optimization (eps = 1.000000) [03:49:21 -21001.118578] SLOW spr round 1 (radius: 5) [03:51:04 -20989.740664] SLOW spr round 2 (radius: 5) [03:52:44 -20989.740547] SLOW spr round 3 (radius: 10) [03:54:39 -20989.740498] SLOW spr round 4 (radius: 15) [03:57:17 -20989.656733] SLOW spr round 5 (radius: 20) [04:01:13 -20989.656732] SLOW spr round 6 (radius: 25) [04:06:13 -20989.656732] Model parameter optimization (eps = 0.100000) [04:06:17] [worker #0] ML tree search #13, logLikelihood: -20989.644729 [04:06:17 -163153.955056] Initial branch length optimization [04:06:21 -134645.663863] Model parameter optimization (eps = 10.000000) [04:06:49 -133933.233674] AUTODETECT spr round 1 (radius: 5) [04:09:04 -77759.699300] AUTODETECT spr round 2 (radius: 10) [04:09:25] [worker #1] ML tree search #14, logLikelihood: -20987.949990 [04:11:25 -51003.977689] AUTODETECT spr round 3 (radius: 15) [04:14:12 -34646.148327] AUTODETECT spr round 4 (radius: 20) [04:14:42] [worker #2] ML tree search #12, logLikelihood: -20996.285331 [04:16:58 -30404.768452] AUTODETECT spr round 5 (radius: 25) [04:20:10 -28046.107979] SPR radius for FAST iterations: 25 (autodetect) [04:20:10 -28046.107979] Model parameter optimization (eps = 3.000000) [04:20:30 -27954.618927] FAST spr round 1 (radius: 25) [04:22:22 -22311.528846] FAST spr round 2 (radius: 25) [04:24:03 -21683.117736] FAST spr round 3 (radius: 25) [04:25:42 -21529.650133] FAST spr round 4 (radius: 25) [04:27:23 -21508.055986] FAST spr round 5 (radius: 25) [04:29:02 -21495.540821] FAST spr round 6 (radius: 25) [04:30:38 -21495.540672] Model parameter optimization (eps = 1.000000) [04:30:54 -21492.767732] SLOW spr round 1 (radius: 5) [04:32:41 -21482.055476] SLOW spr round 2 (radius: 5) [04:34:34 -21481.541384] SLOW spr round 3 (radius: 5) [04:36:26 -21481.255228] SLOW spr round 4 (radius: 5) [04:38:09 -21481.255166] SLOW spr round 5 (radius: 10) [04:40:03 -21476.261539] SLOW spr round 6 (radius: 5) [04:42:11 -21471.602483] SLOW spr round 7 (radius: 5) [04:44:13 -21470.860333] SLOW spr round 8 (radius: 5) [04:46:08 -21470.860259] SLOW spr round 9 (radius: 10) [04:48:09 -21470.860231] SLOW spr round 10 (radius: 15) [04:50:54 -21270.773789] SLOW spr round 11 (radius: 5) [04:53:06 -20995.068745] SLOW spr round 12 (radius: 5) [04:55:02 -20995.065938] SLOW spr round 13 (radius: 10) [04:55:04] [worker #1] ML tree search #17, logLikelihood: -20984.378698 [04:57:04 -20995.064929] SLOW spr round 14 (radius: 15) [04:59:39 -20995.064660] SLOW spr round 15 (radius: 20) [05:03:20 -20995.064594] SLOW spr round 16 (radius: 25) [05:07:58 -20995.064572] Model parameter optimization (eps = 0.100000) [05:08:11] [worker #0] ML tree search #16, logLikelihood: -20994.085066 [05:08:11 -162611.521275] Initial branch length optimization [05:08:14 -134948.314154] Model parameter optimization (eps = 10.000000) [05:08:48 -134282.772717] AUTODETECT spr round 1 (radius: 5) [05:11:04 -78385.878582] AUTODETECT spr round 2 (radius: 10) [05:13:24 -49161.998109] AUTODETECT spr round 3 (radius: 15) [05:13:29] [worker #2] ML tree search #15, logLikelihood: -20987.801189 [05:15:52 -34761.379396] AUTODETECT spr round 4 (radius: 20) [05:18:51 -30946.969754] AUTODETECT spr round 5 (radius: 25) [05:22:18 -28301.725071] SPR radius for FAST iterations: 25 (autodetect) [05:22:18 -28301.725071] Model parameter optimization (eps = 3.000000) [05:22:40 -28210.703594] FAST spr round 1 (radius: 25) [05:24:38 -21842.506409] FAST spr round 2 (radius: 25) [05:26:24 -21094.942376] FAST spr round 3 (radius: 25) [05:28:08 -21028.002260] FAST spr round 4 (radius: 25) [05:29:48 -21016.697732] FAST spr round 5 (radius: 25) [05:31:23 -21013.243558] FAST spr round 6 (radius: 25) [05:32:58 -21013.243126] Model parameter optimization (eps = 1.000000) [05:33:15 -21009.477196] SLOW spr round 1 (radius: 5) [05:35:03 -21006.758623] SLOW spr round 2 (radius: 5) [05:36:42 -21006.757879] SLOW spr round 3 (radius: 10) [05:38:31 -21006.757647] SLOW spr round 4 (radius: 15) [05:41:07 -21005.100081] SLOW spr round 5 (radius: 5) [05:43:25 -21005.100038] SLOW spr round 6 (radius: 10) [05:45:35 -21005.085604] SLOW spr round 7 (radius: 15) [05:48:04 -21005.085603] SLOW spr round 8 (radius: 20) [05:51:50 -21005.085603] SLOW spr round 9 (radius: 25) [05:56:43 -21005.085603] Model parameter optimization (eps = 0.100000) [05:56:49] [worker #0] ML tree search #19, logLikelihood: -21005.021723 [06:02:12] [worker #2] ML tree search #18, logLikelihood: -20992.304302 [06:06:32] [worker #1] ML tree search #20, logLikelihood: -20980.565337 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.202749,0.548375) (0.254619,0.716238) (0.350198,0.735569) (0.192434,2.332511) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -20975.739225 AIC score: 45961.478451 / AICc score: 8090021.478451 / BIC score: 51710.885024 Free parameters (model + branch lengths): 2005 WARNING: Number of free parameters (K=2005) is larger than alignment size (n=130). This might lead to overfitting and compromise tree inference results! WARNING: Best ML tree contains 517 near-zero branches! Best ML tree with collapsed near-zero branches saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579.raxml.bestTreeCollapsed Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P21579/3_mltree/P21579.raxml.log Analysis started: 06-Jul-2021 17:28:17 / finished: 06-Jul-2021 23:34:50 Elapsed time: 21992.911 seconds Consumed energy: 1999.048 Wh (= 10 km in an electric car, or 50 km with an e-scooter!)