RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 05-Jul-2021 14:06:17 as follows: raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/2_msa/P14867_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/3_mltree/P14867 --seed 2 --threads 5 --tree rand{20} pars{20} Analysis options: run mode: ML tree search start tree(s): random (20) random seed: 2 tip-inner: OFF pattern compression: ON per-rate scalers: OFF site repeats: ON fast spr radius: AUTO spr subtree cutoff: 1.000000 branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (5 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/2_msa/P14867_trimmed_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 245 sites WARNING: Sequences tr_B4NUH7_B4NUH7_DROSI_7240 and tr_Q9VXL9_Q9VXL9_DROME_7227 are exactly identical! WARNING: Sequences tr_B4NUH7_B4NUH7_DROSI_7240 and tr_A0A1W4V2W7_A0A1W4V2W7_DROFC_30025 are exactly identical! WARNING: Sequences tr_A0A2R8Q5F6_A0A2R8Q5F6_DANRE_7955 and tr_E9QE70_E9QE70_DANRE_7955 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_G1NPJ0_G1NPJ0_MELGA_9103 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_H0ZJG9_H0ZJG9_TAEGU_59729 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and sp_Q08E50_GBRA5_BOVIN_9913 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_U3JN42_U3JN42_FICAL_59894 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_U3J7R3_U3J7R3_ANAPL_8839 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A091EUS5_A0A091EUS5_CORBR_85066 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A091JTQ9_A0A091JTQ9_EGRGA_188379 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A093QFA9_A0A093QFA9_9PASS_328815 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A091WW47_A0A091WW47_NIPNI_128390 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A087R5Y9_A0A087R5Y9_APTFO_9233 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A093HB40_A0A093HB40_STRCA_441894 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A091VG89_A0A091VG89_OPIHO_30419 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A099Z582_A0A099Z582_TINGU_94827 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A091FWP1_A0A091FWP1_9AVES_55661 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A0A0AB34_A0A0A0AB34_CHAVO_50402 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A2I0MLL1_A0A2I0MLL1_COLLI_8932 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A093GD49_A0A093GD49_DRYPU_118200 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A091I9Z1_A0A091I9Z1_CALAN_9244 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A1V4JBL1_A0A1V4JBL1_PATFA_372326 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A218V4A0_A0A218V4A0_9PASE_299123 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A226PLN9_A0A226PLN9_COLVI_9014 are exactly identical! WARNING: Sequences tr_E1BW42_E1BW42_CHICK_9031 and tr_A0A2Y9DE27_A0A2Y9DE27_TRIMA_127582 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_G1NHM0_G1NHM0_MELGA_9103 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_H0ZDG3_H0ZDG3_TAEGU_59729 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_U3JJZ2_U3JJZ2_FICAL_59894 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_U3IWL0_U3IWL0_ANAPL_8839 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_A0A091FUT2_A0A091FUT2_CORBR_85066 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_A0A093QBU0_A0A093QBU0_9PASS_328815 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_A0A093QR61_A0A093QR61_9PASS_328815 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_A0A091WDJ6_A0A091WDJ6_OPIHO_30419 are exactly identical! WARNING: Sequences tr_E1C890_E1C890_CHICK_9031 and tr_A0A218VEW0_A0A218VEW0_9PASE_299123 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_G1N0R7_G1N0R7_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_U3K9A3_U3K9A3_FICAL_59894 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_U3IRI4_U3IRI4_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A0Q3MMS1_A0A0Q3MMS1_AMAAE_12930 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A091EX14_A0A091EX14_CORBR_85066 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A091J0X1_A0A091J0X1_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A093S2F2_A0A093S2F2_9PASS_328815 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A091WEY6_A0A091WEY6_NIPNI_128390 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A087QUI8_A0A087QUI8_APTFO_9233 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A093HAR6_A0A093HAR6_STRCA_441894 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A091W6K5_A0A091W6K5_OPIHO_30419 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A099ZAE7_A0A099ZAE7_TINGU_94827 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A091FS19_A0A091FS19_9AVES_55661 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A0A0AT20_A0A0A0AT20_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A2I0M4K5_A0A2I0M4K5_COLLI_8932 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A093J2A7_A0A093J2A7_DRYPU_118200 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A1V4KYA2_A0A1V4KYA2_PATFA_372326 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A218UKZ1_A0A218UKZ1_9PASE_299123 are exactly identical! WARNING: Sequences tr_F1NAX6_F1NAX6_CHICK_9031 and tr_A0A226MEE9_A0A226MEE9_CALSU_9009 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_G1NHM5_G1NHM5_MELGA_9103 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_H0ZDK2_H0ZDK2_TAEGU_59729 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_U3JJY8_U3JJY8_FICAL_59894 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_U3J6Z1_U3J6Z1_ANAPL_8839 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A0Q3M2P6_A0A0Q3M2P6_AMAAE_12930 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A091F8T1_A0A091F8T1_CORBR_85066 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A091K2L4_A0A091K2L4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A091VYG2_A0A091VYG2_NIPNI_128390 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A087RAC9_A0A087RAC9_APTFO_9233 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A093HZJ8_A0A093HZJ8_STRCA_441894 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A091WB10_A0A091WB10_OPIHO_30419 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A099YXT6_A0A099YXT6_TINGU_94827 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A091G2W3_A0A091G2W3_9AVES_55661 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A0A0AFG3_A0A0A0AFG3_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A2I0MMV6_A0A2I0MMV6_COLLI_8932 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A093GBA7_A0A093GBA7_DRYPU_118200 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A1V4JFV1_A0A1V4JFV1_PATFA_372326 are exactly identical! WARNING: Sequences tr_F1NXA6_F1NXA6_CHICK_9031 and tr_A0A218VFM1_A0A218VFM1_9PASE_299123 are exactly identical! WARNING: Sequences sp_P19150_GBRA1_CHICK_9031 and tr_G1MUV7_G1MUV7_MELGA_9103 are exactly identical! WARNING: Sequences sp_P19150_GBRA1_CHICK_9031 and tr_U3J1H3_U3J1H3_ANAPL_8839 are exactly identical! WARNING: Sequences sp_P19150_GBRA1_CHICK_9031 and tr_A0A091IYM1_A0A091IYM1_CALAN_9244 are exactly identical! WARNING: Sequences sp_P19150_GBRA1_CHICK_9031 and tr_A0A226PN49_A0A226PN49_COLVI_9014 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_G1MUR5_G1MUR5_MELGA_9103 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_U3J335_U3J335_ANAPL_8839 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A091JP51_A0A091JP51_EGRGA_188379 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A091VGD4_A0A091VGD4_NIPNI_128390 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A087REJ3_A0A087REJ3_APTFO_9233 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A093GYL5_A0A093GYL5_STRCA_441894 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A091VLK9_A0A091VLK9_OPIHO_30419 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A099YQQ5_A0A099YQQ5_TINGU_94827 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A0A0A340_A0A0A0A340_CHAVO_50402 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A2I0MA74_A0A2I0MA74_COLLI_8932 are exactly identical! WARNING: Sequences sp_P21548_GBRG2_CHICK_9031 and tr_A0A1V4KUW8_A0A1V4KUW8_PATFA_372326 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_G3X8K9_G3X8K9_MELGA_9103 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_H0Z7N5_H0Z7N5_TAEGU_59729 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_U3K9A8_U3K9A8_FICAL_59894 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_U3IP50_U3IP50_ANAPL_8839 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A0Q3TT19_A0A0Q3TT19_AMAAE_12930 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A091EVW0_A0A091EVW0_CORBR_85066 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A091IXM4_A0A091IXM4_EGRGA_188379 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A093PJW2_A0A093PJW2_9PASS_328815 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A091VBM4_A0A091VBM4_NIPNI_128390 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A087QUI9_A0A087QUI9_APTFO_9233 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A093HIF5_A0A093HIF5_STRCA_441894 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A099ZA95_A0A099ZA95_TINGU_94827 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A091FQR3_A0A091FQR3_9AVES_55661 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A0A0AS21_A0A0A0AS21_CHAVO_50402 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A2I0M4M6_A0A2I0M4M6_COLLI_8932 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A093H157_A0A093H157_DRYPU_118200 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A218UL23_A0A218UL23_9PASE_299123 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A226MTR1_A0A226MTR1_CALSU_9009 are exactly identical! WARNING: Sequences sp_P34904_GBRG4_CHICK_9031 and tr_A0A226P7B0_A0A226P7B0_COLVI_9014 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_G1NHP7_G1NHP7_MELGA_9103 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_U3JJY6_U3JJY6_FICAL_59894 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_U3J7J0_U3J7J0_ANAPL_8839 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A0Q3QUT2_A0A0Q3QUT2_AMAAE_12930 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A091F4A4_A0A091F4A4_CORBR_85066 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A091JBQ4_A0A091JBQ4_EGRGA_188379 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A093QIJ2_A0A093QIJ2_9PASS_328815 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A091VXD3_A0A091VXD3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A087RAC8_A0A087RAC8_APTFO_9233 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A093HTL6_A0A093HTL6_STRCA_441894 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A0A0AID7_A0A0A0AID7_CHAVO_50402 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A2I0MMW6_A0A2I0MMW6_COLLI_8932 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A093GHM7_A0A093GHM7_DRYPU_118200 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A218VEW2_A0A218VEW2_9PASE_299123 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A226MTE5_A0A226MTE5_CALSU_9009 are exactly identical! WARNING: Sequences tr_Q7LZ70_Q7LZ70_CHICK_9031 and tr_A0A226PWQ0_A0A226PWQ0_COLVI_9014 are exactly identical! WARNING: Sequences sp_Q90845_GBRA6_CHICK_9031 and tr_G1MUW8_G1MUW8_MELGA_9103 are exactly identical! WARNING: Sequences sp_Q90845_GBRA6_CHICK_9031 and tr_U3J0I6_U3J0I6_ANAPL_8839 are exactly identical! WARNING: Sequences sp_Q90845_GBRA6_CHICK_9031 and tr_A0A099YVN8_A0A099YVN8_TINGU_94827 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_M3YP57_M3YP57_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and sp_Q5REA1_GBRG2_PONAB_9601 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_G1TC97_G1TC97_RABIT_9986 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_E2RSQ0_E2RSQ0_CANLF_9615 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and sp_P18508_GBRG2_RAT_10116 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_H0X385_H0X385_OTOGA_30611 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_H0UXY7_H0UXY7_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and sp_P18507_GBRG2_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_G3TVP5_G3TVP5_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_L5L253_L5L253_PTEAL_9402 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A2I2UNR3_A0A2I2UNR3_FELCA_9685 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A0D9RD62_A0A0D9RD62_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A3Q0CT97_A0A3Q0CT97_MESAU_10036 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A2U3VC31_A0A2U3VC31_ODORO_9708 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A2U3XHD7_A0A2U3XHD7_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A2Y9DBJ9_A0A2Y9DBJ9_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A2Y9ISV4_A0A2Y9ISV4_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P22723_GBRG2_MOUSE_10090 and tr_A0A384C829_A0A384C829_URSMA_29073 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_M3Y0V9_M3Y0V9_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2I3GIB9_A0A2I3GIB9_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_G1PHY8_G1PHY8_MYOLU_59463 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2I2YVQ9_A0A2I2YVQ9_GORGO_9595 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and sp_Q5RCC5_GBRA2_PONAB_9601 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_G1SHU6_G1SHU6_RABIT_9986 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_F1PEH3_F1PEH3_CANLF_9615 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2I3RA39_A0A2I3RA39_PANTR_9598 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_F6U3M0_F6U3M0_HORSE_9796 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_W5Q1N6_W5Q1N6_SHEEP_9940 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_I3M4U3_I3M4U3_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and sp_P47869_GBRA2_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_F6U2C0_F6U2C0_MACMU_9544 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_G5AVK2_G5AVK2_HETGA_10181 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_G3SRB3_G3SRB3_LOXAF_9785 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_F7I411_F7I411_CALJA_9483 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A287A779_A0A287A779_PIG_9823 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_G1L9Q6_G1L9Q6_AILME_9646 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_G8F2J4_G8F2J4_MACFA_9541 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_L5JYP9_L5JYP9_PTEAL_9402 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A337SQD9_A0A337SQD9_FELCA_9685 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2I3LYD3_A0A2I3LYD3_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A091DIQ7_A0A091DIQ7_FUKDA_885580 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A0D9RX35_A0A0D9RX35_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A1S3ARL6_A0A1S3ARL6_ERIEU_9365 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A1S3EKE1_A0A1S3EKE1_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A3Q0E8G5_A0A3Q0E8G5_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A3Q0D7Z6_A0A3Q0D7Z6_MESAU_10036 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2K6BEQ5_A0A2K6BEQ5_MACNE_9545 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2K5YVQ8_A0A2K5YVQ8_MANLE_9568 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2R9A081_A0A2R9A081_PANPA_9597 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2U4AS10_A0A2U4AS10_TURTR_9739 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2U3VMS3_A0A2U3VMS3_ODORO_9708 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2U3X7F4_A0A2U3X7F4_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2Y9RVX8_A0A2Y9RVX8_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2Y9JMD2_A0A2Y9JMD2_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2Y9MNS6_A0A2Y9MNS6_DELLE_9749 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A2Y9TDS8_A0A2Y9TDS8_PHYCD_9755 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A384CXT8_A0A384CXT8_URSMA_29073 are exactly identical! WARNING: Sequences sp_P26048_GBRA2_MOUSE_10090 and tr_A0A384A0B3_A0A384A0B3_BALAS_310752 are exactly identical! WARNING: Sequences sp_P26049_GBRA3_MOUSE_10090 and sp_P20236_GBRA3_RAT_10116 are exactly identical! WARNING: Sequences sp_P26049_GBRA3_MOUSE_10090 and tr_A0A1U8D172_A0A1U8D172_MESAU_10036 are exactly identical! WARNING: Sequences sp_P27681_GBRG3_MOUSE_10090 and sp_P28473_GBRG3_RAT_10116 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_M3YP62_M3YP62_MUSPF_9669 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2I3H2X6_A0A2I3H2X6_NOMLE_61853 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_G1PP14_G1PP14_MYOLU_59463 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_G3I2Y9_G3I2Y9_CRIGR_10029 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_G3R6I1_G3R6I1_GORGO_9595 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_H2PHA2_H2PHA2_PONAB_9601 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and sp_Q5R6B2_GBRA1_PONAB_9601 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_G1TAX4_G1TAX4_RABIT_9986 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_E2RSP8_E2RSP8_CANLF_9615 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2I3SDV7_A0A2I3SDV7_PANTR_9598 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_F7EUF6_F7EUF6_MONDO_13616 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_F7DYR3_F7DYR3_HORSE_9796 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_W5PWY6_W5PWY6_SHEEP_9940 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and sp_P62813_GBRA1_RAT_10116 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_I3MYA1_I3MYA1_ICTTR_43179 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_H0X380_H0X380_OTOGA_30611 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_H0V8T0_H0V8T0_CAVPO_10141 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and sp_P14867_GBRA1_HUMAN_9606 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_F7F7H3_F7F7H3_MACMU_9544 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_G5ARH2_G5ARH2_HETGA_10181 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_H0YT92_H0YT92_TAEGU_59729 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_F7I1Q2_F7I1Q2_CALJA_9483 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_F1RR71_F1RR71_PIG_9823 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_G1LJN5_G1LJN5_AILME_9646 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_G7P6T7_G7P6T7_MACFA_9541 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and sp_P08219_GBRA1_BOVIN_9913 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_L5L1N8_L5L1N8_PTEAL_9402 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A337SG73_A0A337SG73_FELCA_9685 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_U3KGH7_U3KGH7_FICAL_59894 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2I3LGH8_A0A2I3LGH8_PAPAN_9555 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A091DUL7_A0A091DUL7_FUKDA_885580 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A0D9RD73_A0A0D9RD73_CHLSB_60711 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A091EVK0_A0A091EVK0_CORBR_85066 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A091JQB3_A0A091JQB3_EGRGA_188379 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A093PU46_A0A093PU46_9PASS_328815 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A091VFC3_A0A091VFC3_NIPNI_128390 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A087REJ4_A0A087REJ4_APTFO_9233 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A091GYT3_A0A091GYT3_9AVES_55661 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A0A0A7N9_A0A0A0A7N9_CHAVO_50402 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2I0MA56_A0A2I0MA56_COLLI_8932 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A093IPS9_A0A093IPS9_DRYPU_118200 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A1S3G5J3_A0A1S3G5J3_DIPOR_10020 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A1U7TPM1_A0A1U7TPM1_TARSY_1868482 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A1U7QGV7_A0A1U7QGV7_MESAU_10036 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A1V4KUZ3_A0A1V4KUZ3_PATFA_372326 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A218V2Y9_A0A218V2Y9_9PASE_299123 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2K5NIN7_A0A2K5NIN7_CERAT_9531 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2K6D8E4_A0A2K6D8E4_MACNE_9545 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2K6A7F7_A0A2K6A7F7_MANLE_9568 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2R9AU65_A0A2R9AU65_PANPA_9597 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2U3UYL9_A0A2U3UYL9_TURTR_9739 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2U3UYM3_A0A2U3UYM3_TURTR_9739 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2U3VC34_A0A2U3VC34_ODORO_9708 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2U3XH15_A0A2U3XH15_LEPWE_9713 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2Y9DB30_A0A2Y9DB30_TRIMA_127582 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2Y9IKF7_A0A2Y9IKF7_ENHLU_391180 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2Y9PZG0_A0A2Y9PZG0_DELLE_9749 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A2Y9FDX8_A0A2Y9FDX8_PHYCD_9755 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A384C6W1_A0A384C6W1_URSMA_29073 are exactly identical! WARNING: Sequences sp_P62812_GBRA1_MOUSE_10090 and tr_A0A383Z8F9_A0A383Z8F9_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A2I3GX20_A0A2I3GX20_NOMLE_61853 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_G3HRU3_G3HRU3_CRIGR_10029 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A2I2ZHK1_A0A2I2ZHK1_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A2J8SEU5_A0A2J8SEU5_PONAB_9601 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_G1T4B6_G1T4B6_RABIT_9986 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_H2Q919_H2Q919_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and sp_P19969_GBRA5_RAT_10116 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A287D9U0_A0A287D9U0_ICTTR_43179 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_H0WH05_H0WH05_OTOGA_30611 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_H0V2I9_H0V2I9_CAVPO_10141 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and sp_P31644_GBRA5_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_G7MW76_G7MW76_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A096NSX8_A0A096NSX8_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A091CLT8_A0A091CLT8_FUKDA_885580 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A0D9R2A1_A0A0D9R2A1_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A1S3EU35_A0A1S3EU35_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A1U7TRH0_A0A1U7TRH0_TARSY_1868482 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A1U7R7H5_A0A1U7R7H5_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A2K5MIV3_A0A2K5MIV3_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A2K6AN58_A0A2K6AN58_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A2K5YHP0_A0A2K5YHP0_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q8BHJ7_GBRA5_MOUSE_10090 and tr_A0A2R9BFW8_A0A2R9BFW8_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_G3RPF4_G3RPF4_GORGO_9595 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_G1U0I8_G1U0I8_RABIT_9986 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_H2QPE7_H2QPE7_PANTR_9598 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_F6UBA8_F6UBA8_HORSE_9796 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_W5Q1Y4_W5Q1Y4_SHEEP_9940 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and sp_P28471_GBRA4_RAT_10116 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and sp_P48169_GBRA4_HUMAN_9606 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_F6YLN4_F6YLN4_MACMU_9544 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_G5AVK4_G5AVK4_HETGA_10181 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_F7IFW0_F7IFW0_CALJA_9483 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_I3LIV9_I3LIV9_PIG_9823 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_G7P5I6_G7P5I6_MACFA_9541 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and sp_P20237_GBRA4_BOVIN_9913 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_M3WNN6_M3WNN6_FELCA_9685 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A096N4I2_A0A096N4I2_PAPAN_9555 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A0D9RX37_A0A0D9RX37_CHLSB_60711 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A1S3ARZ5_A0A1S3ARZ5_ERIEU_9365 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A1S3EKF7_A0A1S3EKF7_DIPOR_10020 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A1U7R722_A0A1U7R722_MESAU_10036 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2K5LLS9_A0A2K5LLS9_CERAT_9531 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2K6BPJ3_A0A2K6BPJ3_MACNE_9545 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2K5Z3P0_A0A2K5Z3P0_MANLE_9568 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2R9C6M3_A0A2R9C6M3_PANPA_9597 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2U3V438_A0A2U3V438_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2U3V4J7_A0A2U3V4J7_TURTR_9739 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2Y9MTZ7_A0A2Y9MTZ7_DELLE_9749 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A2Y9FA62_A0A2Y9FA62_PHYCD_9755 are exactly identical! WARNING: Sequences sp_Q9D6F4_GBRA4_MOUSE_10090 and tr_A0A384A0D0_A0A384A0D0_BALAS_310752 are exactly identical! WARNING: Sequences sp_Q9R0Y8_GBRG1_MOUSE_10090 and sp_P23574_GBRG1_RAT_10116 are exactly identical! WARNING: Sequences sp_Q9R0Y8_GBRG1_MOUSE_10090 and tr_A0A1U7QKG9_A0A1U7QKG9_MESAU_10036 are exactly identical! WARNING: Sequences tr_M3XNJ0_M3XNJ0_MUSPF_9669 and tr_A0A2Y9LJ41_A0A2Y9LJ41_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_G1S687_G1S687_NOMLE_61853 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_G1TKD0_G1TKD0_RABIT_9986 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_H0X7L1_H0X7L1_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_F6PX98_F6PX98_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_U3EFS7_U3EFS7_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_G7P5I4_G7P5I4_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_A0A096NZ00_A0A096NZ00_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_A0A0D9RX31_A0A0D9RX31_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_A0A2K5NYG4_A0A2K5NYG4_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_A0A2K5Y3I5_A0A2K5Y3I5_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3Y0V1_M3Y0V1_MUSPF_9669 and tr_A0A2Y9JMN0_A0A2Y9JMN0_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Y0X5_M3Y0X5_MUSPF_9669 and tr_A0A2Y9JME1_A0A2Y9JME1_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_G1RU38_G1RU38_NOMLE_61853 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_G3SKG8_G3SKG8_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2J8S433_A0A2J8S433_PONAB_9601 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_G1SV92_G1SV92_RABIT_9986 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_E2QVJ7_E2QVJ7_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_H2QZ88_H2QZ88_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_W5PET8_W5PET8_SHEEP_9940 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_I3M419_I3M419_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_H0X8M3_H0X8M3_OTOGA_30611 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_H0UVN7_H0UVN7_CAVPO_10141 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and sp_P34903_GBRA3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_F7H099_F7H099_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_I3LC11_I3LC11_PIG_9823 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_G1M0C2_G1M0C2_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_G7Q1Y0_G7Q1Y0_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_F1MCS2_F1MCS2_BOVIN_9913 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_M3WNK6_M3WNK6_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A096N607_A0A096N607_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A091DMC8_A0A091DMC8_FUKDA_885580 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A0D9R3U7_A0A0D9R3U7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A1U7TZ32_A0A1U7TZ32_TARSY_1868482 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2K5MJG0_A0A2K5MJG0_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2K6CWX7_A0A2K6CWX7_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2K5ZSS5_A0A2K5ZSS5_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2R9AHX2_A0A2R9AHX2_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2U4BNY8_A0A2U4BNY8_TURTR_9739 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2U3WTN0_A0A2U3WTN0_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2Y9EAE0_A0A2Y9EAE0_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2Y9IEE7_A0A2Y9IEE7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2Y9M6Y0_A0A2Y9M6Y0_DELLE_9749 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A2Y9S5C5_A0A2Y9S5C5_PHYCD_9755 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A384BMR2_A0A384BMR2_URSMA_29073 are exactly identical! WARNING: Sequences tr_M3YJX4_M3YJX4_MUSPF_9669 and tr_A0A383ZV80_A0A383ZV80_BALAS_310752 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_G1QX18_G1QX18_NOMLE_61853 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_G3QET0_G3QET0_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_H2PHA0_H2PHA0_PONAB_9601 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_G1T8A9_G1T8A9_RABIT_9986 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_E2RSN3_E2RSN3_CANLF_9615 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_H2QRY3_H2QRY3_PANTR_9598 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_F7AP25_F7AP25_HORSE_9796 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_I3N728_I3N728_ICTTR_43179 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and sp_Q16445_GBRA6_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A1D5RL15_A0A1D5RL15_MACMU_9544 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_F6XJA8_F6XJA8_CALJA_9483 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_D2GUJ9_D2GUJ9_AILME_9646 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_G7P6T6_G7P6T6_MACFA_9541 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A337SQ96_A0A337SQ96_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A096ND56_A0A096ND56_PAPAN_9555 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2K5P513_A0A2K5P513_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2K6DWB6_A0A2K6DWB6_MACNE_9545 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2K6AIW7_A0A2K6AIW7_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2R8ZQ75_A0A2R8ZQ75_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2U3VC35_A0A2U3VC35_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2U3XGY9_A0A2U3XGY9_LEPWE_9713 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2Y9DBK4_A0A2Y9DBK4_TRIMA_127582 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A2Y9IT63_A0A2Y9IT63_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YP65_M3YP65_MUSPF_9669 and tr_A0A384C738_A0A384C738_URSMA_29073 are exactly identical! WARNING: Sequences tr_A0A3B3III2_A0A3B3III2_ORYLA_8090 and tr_I3JP06_I3JP06_ORENI_8128 are exactly identical! WARNING: Sequences tr_A0A3B3III2_A0A3B3III2_ORYLA_8090 and tr_H2SQA4_H2SQA4_TAKRU_31033 are exactly identical! WARNING: Sequences tr_A0A3B3III2_A0A3B3III2_ORYLA_8090 and tr_A0A087XQK7_A0A087XQK7_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B3III2_A0A3B3III2_ORYLA_8090 and tr_A0A1S3RMF0_A0A1S3RMF0_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A3B3III2_A0A3B3III2_ORYLA_8090 and tr_A0A2I4C5H6_A0A2I4C5H6_9TELE_52670 are exactly identical! WARNING: Sequences tr_A0A3B3III2_A0A3B3III2_ORYLA_8090 and tr_A0A2U9B877_A0A2U9B877_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2M3N3_H2M3N3_ORYLA_8090 and tr_I3J069_I3J069_ORENI_8128 are exactly identical! WARNING: Sequences tr_H2M3N3_H2M3N3_ORYLA_8090 and tr_A0A2I4BVX2_A0A2I4BVX2_9TELE_52670 are exactly identical! WARNING: Sequences tr_H2M3N3_H2M3N3_ORYLA_8090 and tr_A0A2U9B972_A0A2U9B972_SCOMX_52904 are exactly identical! WARNING: Sequences tr_H2MMD5_H2MMD5_ORYLA_8090 and tr_H2T877_H2T877_TAKRU_31033 are exactly identical! WARNING: Sequences tr_B4JLF8_B4JLF8_DROGR_7222 and tr_B4M3E7_B4M3E7_DROVI_7244 are exactly identical! WARNING: Sequences tr_B4JLF8_B4JLF8_DROGR_7222 and tr_B4L420_B4L420_DROMO_7230 are exactly identical! WARNING: Sequences tr_B4JLF8_B4JLF8_DROGR_7222 and tr_A0A0M5J8D6_A0A0M5J8D6_DROBS_30019 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_G3R5Q4_G3R5Q4_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_H2RDJ9_H2RDJ9_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_F7A3C9_F7A3C9_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_G7P6T8_G7P6T8_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_A0A2I3MQB3_A0A2I3MQB3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_A0A2K5MKN6_A0A2K5MKN6_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_A0A2K6BAT3_A0A2K6BAT3_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_A0A2K5XNZ6_A0A2K5XNZ6_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I3HA40_A0A2I3HA40_NOMLE_61853 and tr_A0A2R9CTI5_A0A2R9CTI5_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1RHV7_G1RHV7_NOMLE_61853 and tr_G1T1K2_G1T1K2_RABIT_9986 are exactly identical! WARNING: Sequences tr_G1RHV7_G1RHV7_NOMLE_61853 and tr_G5AZI0_G5AZI0_HETGA_10181 are exactly identical! WARNING: Sequences tr_G1RHV7_G1RHV7_NOMLE_61853 and tr_M3X5P6_M3X5P6_FELCA_9685 are exactly identical! WARNING: Sequences tr_G1RHV7_G1RHV7_NOMLE_61853 and tr_A0A2U3W926_A0A2U3W926_ODORO_9708 are exactly identical! WARNING: Sequences tr_G1RHV7_G1RHV7_NOMLE_61853 and tr_A0A384DC17_A0A384DC17_URSMA_29073 are exactly identical! WARNING: Sequences tr_G1RTZ6_G1RTZ6_NOMLE_61853 and tr_G3QGA7_G3QGA7_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1RTZ6_G1RTZ6_NOMLE_61853 and sp_P78334_GBRE_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1RTZ6_G1RTZ6_NOMLE_61853 and tr_F7GJ80_F7GJ80_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1RTZ6_G1RTZ6_NOMLE_61853 and tr_G7Q1X8_G7Q1X8_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1RTZ6_G1RTZ6_NOMLE_61853 and tr_A0A096N046_A0A096N046_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1RTZ6_G1RTZ6_NOMLE_61853 and tr_A0A2K5M888_A0A2K5M888_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1RTZ6_G1RTZ6_NOMLE_61853 and tr_A0A2K5YWE7_A0A2K5YWE7_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1P7H1_G1P7H1_MYOLU_59463 and tr_A0A091D5U3_A0A091D5U3_FUKDA_885580 are exactly identical! WARNING: Sequences tr_G1P7H1_G1P7H1_MYOLU_59463 and tr_A0A1U7TZE1_A0A1U7TZE1_TARSY_1868482 are exactly identical! WARNING: Sequences tr_A0A2I2ZBY0_A0A2I2ZBY0_GORGO_9595 and tr_H2PD78_H2PD78_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I2ZBY0_A0A2I2ZBY0_GORGO_9595 and tr_H2QPE4_H2QPE4_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2ZBY0_A0A2I2ZBY0_GORGO_9595 and sp_Q8N1C3_GBRG1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2ZBY0_A0A2I2ZBY0_GORGO_9595 and tr_A0A2R9A1L5_A0A2R9A1L5_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_H2NMM1_H2NMM1_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_A0A2I3TTK9_A0A2I3TTK9_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_I3LXL1_I3LXL1_ICTTR_43179 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and sp_Q99928_GBRG3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_F7HI54_F7HI54_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_G7PAL6_G7PAL6_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_A0A2I3NBF3_A0A2I3NBF3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_A0A2K5P6J3_A0A2K5P6J3_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_A0A2K6D794_A0A2K6D794_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_A0A2K5ZNG9_A0A2K5ZNG9_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I2ZXT7_A0A2I2ZXT7_GORGO_9595 and tr_A0A2R9BD98_A0A2R9BD98_PANPA_9597 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_W5PHR2_W5PHR2_SHEEP_9940 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_F1SR89_F1SR89_PIG_9823 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_D2HI26_D2HI26_AILME_9646 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_A0A2U4C6W3_A0A2U4C6W3_TURTR_9739 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_A0A2U3ZK06_A0A2U3ZK06_ODORO_9708 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_A0A2U3XA10_A0A2U3XA10_LEPWE_9713 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_A0A2Y9Q687_A0A2Y9Q687_DELLE_9749 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_A0A2Y9RWR0_A0A2Y9RWR0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_A0A384DBX8_A0A384DBX8_URSMA_29073 are exactly identical! WARNING: Sequences tr_E2RG38_E2RG38_CANLF_9615 and tr_A0A383ZW90_A0A383ZW90_BALAS_310752 are exactly identical! WARNING: Sequences tr_E2RH22_E2RH22_CANLF_9615 and tr_F6ZRR6_F6ZRR6_HORSE_9796 are exactly identical! WARNING: Sequences tr_E2RH22_E2RH22_CANLF_9615 and tr_G3STH9_G3STH9_LOXAF_9785 are exactly identical! WARNING: Sequences tr_E2RH22_E2RH22_CANLF_9615 and tr_G1MC80_G1MC80_AILME_9646 are exactly identical! WARNING: Sequences tr_E2RH22_E2RH22_CANLF_9615 and tr_A0A2I2UYM6_A0A2I2UYM6_FELCA_9685 are exactly identical! WARNING: Sequences tr_E2RH22_E2RH22_CANLF_9615 and tr_A0A2U3X4P9_A0A2U3X4P9_ODORO_9708 are exactly identical! WARNING: Sequences tr_E2RH22_E2RH22_CANLF_9615 and tr_A0A2Y9E9I8_A0A2Y9E9I8_TRIMA_127582 are exactly identical! WARNING: Sequences tr_E2RH22_E2RH22_CANLF_9615 and tr_A0A384CXZ4_A0A384CXZ4_URSMA_29073 are exactly identical! WARNING: Sequences tr_F1P9P9_F1P9P9_CANLF_9615 and tr_G3W8H5_G3W8H5_SARHA_9305 are exactly identical! WARNING: Sequences tr_F1P9P9_F1P9P9_CANLF_9615 and tr_D2H5P3_D2H5P3_AILME_9646 are exactly identical! WARNING: Sequences tr_F1P9P9_F1P9P9_CANLF_9615 and tr_A0A2U3VMT0_A0A2U3VMT0_ODORO_9708 are exactly identical! WARNING: Sequences tr_F1P9P9_F1P9P9_CANLF_9615 and tr_A0A2U3X7G5_A0A2U3X7G5_LEPWE_9713 are exactly identical! WARNING: Sequences tr_F1P9P9_F1P9P9_CANLF_9615 and tr_A0A384CYV8_A0A384CYV8_URSMA_29073 are exactly identical! WARNING: Sequences tr_H2QZ86_H2QZ86_PANTR_9598 and tr_A0A2R8ZSJ9_A0A2R8ZSJ9_PANPA_9597 are exactly identical! WARNING: Sequences tr_F6UNN3_F6UNN3_ORNAN_9258 and tr_F7C2S4_F7C2S4_MONDO_13616 are exactly identical! WARNING: Sequences tr_F7FRY6_F7FRY6_ORNAN_9258 and tr_G5AZM8_G5AZM8_HETGA_10181 are exactly identical! WARNING: Sequences tr_F7FRY6_F7FRY6_ORNAN_9258 and tr_A0A091DSW5_A0A091DSW5_FUKDA_885580 are exactly identical! WARNING: Sequences tr_F7FRY6_F7FRY6_ORNAN_9258 and tr_A0A151M6I5_A0A151M6I5_ALLMI_8496 are exactly identical! WARNING: Sequences tr_F7FRY6_F7FRY6_ORNAN_9258 and tr_A0A1U7SLB6_A0A1U7SLB6_ALLSI_38654 are exactly identical! WARNING: Sequences tr_F6S4X6_F6S4X6_MONDO_13616 and tr_G3WKM0_G3WKM0_SARHA_9305 are exactly identical! WARNING: Sequences tr_F6ZBY7_F6ZBY7_MONDO_13616 and tr_G3WIL0_G3WIL0_SARHA_9305 are exactly identical! WARNING: Sequences tr_F7AWR0_F7AWR0_MONDO_13616 and tr_G3VQ21_G3VQ21_SARHA_9305 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_W5PX45_W5PX45_SHEEP_9940 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_I3MH60_I3MH60_ICTTR_43179 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_F1RR72_F1RR72_PIG_9823 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_F1MIG7_F1MIG7_BOVIN_9913 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_A0A2U4C645_A0A2U4C645_TURTR_9739 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_A0A2U4C654_A0A2U4C654_TURTR_9739 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_A0A2Y9Q610_A0A2Y9Q610_DELLE_9749 are exactly identical! WARNING: Sequences tr_F6YYW0_F6YYW0_HORSE_9796 and tr_A0A2Y9FB04_A0A2Y9FB04_PHYCD_9755 are exactly identical! WARNING: Sequences tr_W5Q189_W5Q189_SHEEP_9940 and tr_I3MBX7_I3MBX7_ICTTR_43179 are exactly identical! WARNING: Sequences tr_W5Q189_W5Q189_SHEEP_9940 and tr_F1S3S9_F1S3S9_PIG_9823 are exactly identical! WARNING: Sequences tr_W5Q189_W5Q189_SHEEP_9940 and tr_F6Q4V7_F6Q4V7_BOVIN_9913 are exactly identical! WARNING: Sequences tr_W5Q189_W5Q189_SHEEP_9940 and tr_A0A2U4AS56_A0A2U4AS56_TURTR_9739 are exactly identical! WARNING: Sequences tr_W5Q189_W5Q189_SHEEP_9940 and tr_A0A2Y9MFS9_A0A2Y9MFS9_DELLE_9749 are exactly identical! WARNING: Sequences tr_W5Q189_W5Q189_SHEEP_9940 and tr_A0A2Y9T9X9_A0A2Y9T9X9_PHYCD_9755 are exactly identical! WARNING: Sequences tr_W5Q189_W5Q189_SHEEP_9940 and tr_A0A384A0U1_A0A384A0U1_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A3B5PT28_A0A3B5PT28_XIPMA_8083 and tr_A0A087XKI5_A0A087XKI5_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5PZ31_A0A3B5PZ31_XIPMA_8083 and tr_A0A096M6P9_A0A096M6P9_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5QTZ7_A0A3B5QTZ7_XIPMA_8083 and tr_A0A096MC76_A0A096MC76_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A3B5R8T2_A0A3B5R8T2_XIPMA_8083 and tr_A0A087YMH3_A0A087YMH3_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4ADT0_M4ADT0_XIPMA_8083 and tr_I3JP00_I3JP00_ORENI_8128 are exactly identical! WARNING: Sequences tr_M4ADT0_M4ADT0_XIPMA_8083 and tr_H2SGA4_H2SGA4_TAKRU_31033 are exactly identical! WARNING: Sequences tr_M4ADT0_M4ADT0_XIPMA_8083 and tr_A0A096LYX4_A0A096LYX4_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4ADT0_M4ADT0_XIPMA_8083 and tr_A0A2I4C5G4_A0A2I4C5G4_9TELE_52670 are exactly identical! WARNING: Sequences tr_M4ADT0_M4ADT0_XIPMA_8083 and tr_A0A2U9B805_A0A2U9B805_SCOMX_52904 are exactly identical! WARNING: Sequences tr_M4AM25_M4AM25_XIPMA_8083 and tr_A0A087XDN2_A0A087XDN2_POEFO_48698 are exactly identical! WARNING: Sequences tr_A0A087ZPX8_A0A087ZPX8_APIME_7460 and tr_A0A2A3EJ87_A0A2A3EJ87_APICC_94128 are exactly identical! WARNING: Sequences tr_A0A158NC41_A0A158NC41_ATTCE_12957 and tr_F4WHV6_F4WHV6_ACREC_103372 are exactly identical! WARNING: Sequences tr_A0A158NC41_A0A158NC41_ATTCE_12957 and tr_A0A195FL08_A0A195FL08_9HYME_34720 are exactly identical! WARNING: Sequences tr_A0A158NC41_A0A158NC41_ATTCE_12957 and tr_A0A195C9D5_A0A195C9D5_9HYME_456900 are exactly identical! WARNING: Sequences tr_G5APB0_G5APB0_HETGA_10181 and tr_A0A091DDD6_A0A091DDD6_FUKDA_885580 are exactly identical! WARNING: Sequences tr_K7G918_K7G918_PELSI_13735 and tr_A0A151NMV3_A0A151NMV3_ALLMI_8496 are exactly identical! WARNING: Sequences tr_K7G918_K7G918_PELSI_13735 and tr_A0A1U7RQQ1_A0A1U7RQQ1_ALLSI_38654 are exactly identical! WARNING: Sequences tr_G3TNF3_G3TNF3_LOXAF_9785 and tr_A0A2Y9ECL0_A0A2Y9ECL0_TRIMA_127582 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_U3KGH0_U3KGH0_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A091EWR6_A0A091EWR6_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A093Q6Y2_A0A093Q6Y2_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A091VH83_A0A091VH83_NIPNI_128390 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A091W1V7_A0A091W1V7_OPIHO_30419 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A091GD26_A0A091GD26_9AVES_55661 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A2I0MA55_A0A2I0MA55_COLLI_8932 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A093GEQ8_A0A093GEQ8_DRYPU_118200 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A1V4KV77_A0A1V4KV77_PATFA_372326 are exactly identical! WARNING: Sequences tr_H0YT88_H0YT88_TAEGU_59729 and tr_A0A218V2X5_A0A218V2X5_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0YTA0_H0YTA0_TAEGU_59729 and tr_U3KGH9_U3KGH9_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0YTA0_H0YTA0_TAEGU_59729 and tr_A0A091FHY5_A0A091FHY5_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0YTA0_H0YTA0_TAEGU_59729 and tr_A0A093Q0H9_A0A093Q0H9_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0YTA0_H0YTA0_TAEGU_59729 and tr_A0A218V3Q2_A0A218V3Q2_9PASE_299123 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_U3I457_U3I457_ANAPL_8839 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A091EFD5_A0A091EFD5_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A091J5L2_A0A091J5L2_EGRGA_188379 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A091VSB3_A0A091VSB3_NIPNI_128390 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A087R5Z0_A0A087R5Z0_APTFO_9233 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A093H4P1_A0A093H4P1_STRCA_441894 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A093GA90_A0A093GA90_DRYPU_118200 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A1U8DRD6_A0A1U8DRD6_ALLSI_38654 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A1V4JAW9_A0A1V4JAW9_PATFA_372326 are exactly identical! WARNING: Sequences tr_H0ZJI8_H0ZJI8_TAEGU_59729 and tr_A0A218V4A3_A0A218V4A3_9PASE_299123 are exactly identical! WARNING: Sequences tr_F6Y079_F6Y079_XENTR_8364 and tr_A0A1L8F6R2_A0A1L8F6R2_XENLA_8355 are exactly identical! WARNING: Sequences tr_F6Y090_F6Y090_XENTR_8364 and tr_A0A1L8HGW6_A0A1L8HGW6_XENLA_8355 are exactly identical! WARNING: Sequences tr_F7AMS3_F7AMS3_XENTR_8364 and tr_A0A1L8GRC4_A0A1L8GRC4_XENLA_8355 are exactly identical! WARNING: Sequences tr_F7DCL6_F7DCL6_XENTR_8364 and tr_A0A1L8HL95_A0A1L8HL95_XENLA_8355 are exactly identical! WARNING: Sequences tr_L5JZG1_L5JZG1_PTEAL_9402 and tr_A0A2U3V470_A0A2U3V470_TURTR_9739 are exactly identical! WARNING: Sequences tr_A0A3B1JBJ4_A0A3B1JBJ4_ASTMX_7994 and tr_A0A2D0SXD9_A0A2D0SXD9_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A3B1JBJ4_A0A3B1JBJ4_ASTMX_7994 and tr_A0A2D0SYD6_A0A2D0SYD6_ICTPU_7998 are exactly identical! WARNING: Sequences tr_W5KEJ2_W5KEJ2_ASTMX_7994 and tr_A0A0P7U724_A0A0P7U724_9TELE_113540 are exactly identical! WARNING: Sequences tr_W5KEJ2_W5KEJ2_ASTMX_7994 and tr_A0A2D0SY10_A0A2D0SY10_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A151M6G4_A0A151M6G4_ALLMI_8496 and tr_A0A1U7SNW2_A0A1U7SNW2_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151M6J0_A0A151M6J0_ALLMI_8496 and tr_A0A1U7SDV9_A0A1U7SDV9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151NMW2_A0A151NMW2_ALLMI_8496 and tr_A0A3Q0H2C5_A0A3Q0H2C5_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151PA84_A0A151PA84_ALLMI_8496 and tr_A0A3Q0GHC9_A0A3Q0GHC9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151PAF5_A0A151PAF5_ALLMI_8496 and tr_A0A1U8CZN1_A0A1U8CZN1_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151PAK3_A0A151PAK3_ALLMI_8496 and tr_A0A1U7RZJ0_A0A1U7RZJ0_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A0Q3T866_A0A0Q3T866_AMAAE_12930 and tr_A0A2I0MMW8_A0A2I0MMW8_COLLI_8932 are exactly identical! WARNING: Sequences tr_A0A091JE75_A0A091JE75_EGRGA_188379 and tr_A0A091X2Q9_A0A091X2Q9_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A091JE75_A0A091JE75_EGRGA_188379 and tr_A0A087RAD0_A0A087RAD0_APTFO_9233 are exactly identical! WARNING: Sequences tr_A0A091JE75_A0A091JE75_EGRGA_188379 and tr_A0A091FZ43_A0A091FZ43_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A091JE75_A0A091JE75_EGRGA_188379 and tr_A0A0A0AJK8_A0A0A0AJK8_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A091JE75_A0A091JE75_EGRGA_188379 and tr_A0A093GI44_A0A093GI44_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A091JE75_A0A091JE75_EGRGA_188379 and tr_A0A091HW31_A0A091HW31_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091JE75_A0A091JE75_EGRGA_188379 and tr_A0A1V4JFV5_A0A1V4JFV5_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A093Q4I3_A0A093Q4I3_9PASS_328815 and tr_A0A091HTV3_A0A091HTV3_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A091GBB7_A0A091GBB7_9AVES_55661 and tr_A0A093GNY3_A0A093GNY3_DRYPU_118200 are exactly identical! WARNING: Sequences tr_A0A1S3LMV2_A0A1S3LMV2_SALSA_8030 and tr_A0A060W1K9_A0A060W1K9_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3LP05_A0A1S3LP05_SALSA_8030 and tr_A0A1S3RP77_A0A1S3RP77_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1S3LP05_A0A1S3LP05_SALSA_8030 and tr_A0A060W6N7_A0A060W6N7_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3LP05_A0A1S3LP05_SALSA_8030 and tr_A0A2U9B7Q4_A0A2U9B7Q4_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A1S3ST08_A0A1S3ST08_SALSA_8030 and tr_A0A060WB60_A0A060WB60_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A226MJA2_A0A226MJA2_CALSU_9009 and tr_A0A226PLG3_A0A226PLG3_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226MTK6_A0A226MTK6_CALSU_9009 and tr_A0A226PWF0_A0A226PWF0_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0T272_A0A2D0T272_ICTPU_7998 and tr_A0A2D0T2I8_A0A2D0T2I8_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0T272_A0A2D0T272_ICTPU_7998 and tr_A0A2D0T355_A0A2D0T355_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U3V875_A0A2U3V875_TURTR_9739 and tr_A0A383Z8V9_A0A383Z8V9_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2U4C747_A0A2U4C747_TURTR_9739 and tr_A0A2Y9QAC6_A0A2Y9QAC6_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U4C747_A0A2U4C747_TURTR_9739 and tr_A0A2Y9S4E9_A0A2Y9S4E9_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U4C747_A0A2U4C747_TURTR_9739 and tr_A0A383ZVP3_A0A383ZVP3_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 544 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/3_mltree/P14867.raxml.reduced.phy Alignment comprises 1 partitions and 245 patterns Partition 0: noname Model: LG4X+R4 Alignment sites / patterns: 245 / 245 Gaps: 1.30 % Invariant sites: 2.86 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/3_mltree/P14867.raxml.rba Parallelization scheme autoconfig: 5 worker(s) x 1 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Generating 20 random starting tree(s) with 1001 taxa [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 245 / 19600 [00:00:00] Data distribution: max. searches per worker: 4 Starting ML tree search with 20 distinct starting trees [00:00:00 -241698.498340] Initial branch length optimization [00:00:05 -193094.301138] Model parameter optimization (eps = 10.000000) [00:00:52 -192376.711500] AUTODETECT spr round 1 (radius: 5) [00:03:35 -88895.711367] AUTODETECT spr round 2 (radius: 10) [00:06:10 -54681.066868] AUTODETECT spr round 3 (radius: 15) [00:08:58 -39842.179266] AUTODETECT spr round 4 (radius: 20) [00:12:11 -31606.435712] AUTODETECT spr round 5 (radius: 25) [00:15:42 -29965.153293] SPR radius for FAST iterations: 25 (autodetect) [00:15:42 -29965.153293] Model parameter optimization (eps = 3.000000) [00:16:29 -29875.609661] FAST spr round 1 (radius: 25) [00:18:59 -24042.353376] FAST spr round 2 (radius: 25) [00:21:03 -21633.301026] FAST spr round 3 (radius: 25) [00:22:54 -21008.886350] FAST spr round 4 (radius: 25) [00:24:42 -20917.469412] FAST spr round 5 (radius: 25) [00:26:28 -20915.381500] FAST spr round 6 (radius: 25) [00:28:11 -20915.381456] Model parameter optimization (eps = 1.000000) [00:28:31 -20910.362520] SLOW spr round 1 (radius: 5) [00:30:32 -20901.999930] SLOW spr round 2 (radius: 5) [00:32:31 -20901.999555] SLOW spr round 3 (radius: 10) [00:34:39 -20899.655834] SLOW spr round 4 (radius: 5) [00:37:04 -20892.722136] SLOW spr round 5 (radius: 5) [00:39:10 -20892.721607] SLOW spr round 6 (radius: 10) [00:41:14 -20892.085036] SLOW spr round 7 (radius: 5) [00:43:33 -20892.085011] SLOW spr round 8 (radius: 10) [00:45:51 -20891.989545] SLOW spr round 9 (radius: 15) [00:48:57 -20891.779460] SLOW spr round 10 (radius: 5) [00:51:27 -20891.779443] SLOW spr round 11 (radius: 10) [00:53:55 -20891.779426] SLOW spr round 12 (radius: 15) [00:56:58 -20891.779409] SLOW spr round 13 (radius: 20) [00:58:22] [worker #3] ML tree search #4, logLikelihood: -20886.251041 [01:02:05 -20890.665869] SLOW spr round 14 (radius: 5) [01:04:38 -20890.665745] SLOW spr round 15 (radius: 10) [01:07:08 -20890.665727] SLOW spr round 16 (radius: 15) [01:10:07 -20890.665707] SLOW spr round 17 (radius: 20) [01:15:12 -20890.665689] SLOW spr round 18 (radius: 25) [01:17:48] [worker #2] ML tree search #3, logLikelihood: -22599.493961 [01:22:29] [worker #1] ML tree search #2, logLikelihood: -20887.497225 [01:23:17 -20890.665671] Model parameter optimization (eps = 0.100000) [01:23:31] [worker #0] ML tree search #1, logLikelihood: -20890.074897 [01:23:31 -240833.074853] Initial branch length optimization [01:23:36 -190973.078517] Model parameter optimization (eps = 10.000000) [01:24:13 -190208.970236] AUTODETECT spr round 1 (radius: 5) [01:27:00 -84563.073754] AUTODETECT spr round 2 (radius: 10) [01:29:37 -51250.817411] AUTODETECT spr round 3 (radius: 15) [01:32:35 -36360.915707] AUTODETECT spr round 4 (radius: 20) [01:36:02 -31895.039340] AUTODETECT spr round 5 (radius: 25) [01:39:35 -29518.033966] SPR radius for FAST iterations: 25 (autodetect) [01:39:35 -29518.033966] Model parameter optimization (eps = 3.000000) [01:40:06 -29439.818393] FAST spr round 1 (radius: 25) [01:42:35 -23414.981249] FAST spr round 2 (radius: 25) [01:44:30 -22486.848129] FAST spr round 3 (radius: 25) [01:46:09 -22272.892747] FAST spr round 4 (radius: 25) [01:47:48 -22267.278165] FAST spr round 5 (radius: 25) [01:49:27 -22264.639816] FAST spr round 6 (radius: 25) [01:51:00 -22264.058270] FAST spr round 7 (radius: 25) [01:52:32 -22264.058186] Model parameter optimization (eps = 1.000000) [01:52:48 -22256.343541] SLOW spr round 1 (radius: 5) [01:54:44 -22249.695448] SLOW spr round 2 (radius: 5) [01:56:39 -22247.826499] SLOW spr round 3 (radius: 5) [01:57:01] [worker #4] ML tree search #5, logLikelihood: -20896.082850 [01:58:27 -22247.826485] SLOW spr round 4 (radius: 10) [02:00:27 -22245.718946] SLOW spr round 5 (radius: 5) [02:02:50 -22240.925396] SLOW spr round 6 (radius: 5) [02:04:54 -22240.925318] SLOW spr round 7 (radius: 10) [02:06:51 -22240.925307] SLOW spr round 8 (radius: 15) [02:10:09 -22240.862873] SLOW spr round 9 (radius: 20) [02:15:08 -22240.862855] SLOW spr round 10 (radius: 25) [02:24:14 -21695.851600] SLOW spr round 11 (radius: 5) [02:27:04 -21334.952280] SLOW spr round 12 (radius: 5) [02:29:39 -21221.073154] SLOW spr round 13 (radius: 5) [02:31:46 -21215.374172] SLOW spr round 14 (radius: 5) [02:33:42 -21209.195761] SLOW spr round 15 (radius: 5) [02:35:35 -21209.195664] SLOW spr round 16 (radius: 10) [02:37:42 -21200.570069] SLOW spr round 17 (radius: 5) [02:40:05 -21185.717139] SLOW spr round 18 (radius: 5) [02:42:08 -21185.716966] SLOW spr round 19 (radius: 10) [02:42:12] [worker #1] ML tree search #7, logLikelihood: -20893.474606 [02:44:13 -21183.843238] SLOW spr round 20 (radius: 5) [02:46:31 -21183.843236] SLOW spr round 21 (radius: 10) [02:48:51 -21183.843236] SLOW spr round 22 (radius: 15) [02:52:04 -21165.750757] SLOW spr round 23 (radius: 5) [02:54:40 -21138.732516] SLOW spr round 24 (radius: 5) [02:56:50 -21135.451831] SLOW spr round 25 (radius: 5) [02:58:43 -21135.451823] SLOW spr round 26 (radius: 10) [03:00:55 -21135.442491] SLOW spr round 27 (radius: 15) [03:04:10 -21135.441476] SLOW spr round 28 (radius: 20) [03:09:22 -21087.177193] SLOW spr round 29 (radius: 5) [03:12:00 -20900.563189] SLOW spr round 30 (radius: 5) [03:14:31 -20897.533383] SLOW spr round 31 (radius: 5) [03:16:37 -20897.531917] SLOW spr round 32 (radius: 10) [03:16:59] [worker #2] ML tree search #8, logLikelihood: -20889.924324 [03:18:43 -20897.531897] SLOW spr round 33 (radius: 15) [03:21:56 -20897.531881] SLOW spr round 34 (radius: 20) [03:27:07 -20895.912036] SLOW spr round 35 (radius: 5) [03:29:43 -20895.122804] SLOW spr round 36 (radius: 5) [03:31:12] [worker #3] ML tree search #9, logLikelihood: -20900.140170 [03:32:04 -20895.122768] SLOW spr round 37 (radius: 10) [03:34:15 -20895.122764] SLOW spr round 38 (radius: 15) [03:37:27 -20895.122761] SLOW spr round 39 (radius: 20) [03:42:42 -20895.122758] SLOW spr round 40 (radius: 25) [03:51:03 -20895.122755] Model parameter optimization (eps = 0.100000) [03:51:21] [worker #0] ML tree search #6, logLikelihood: -20893.205428 [03:51:21 -239690.298275] Initial branch length optimization [03:51:25 -190289.333785] Model parameter optimization (eps = 10.000000) [03:52:15 -189647.082534] AUTODETECT spr round 1 (radius: 5) [03:53:08] [worker #1] ML tree search #12, logLikelihood: -20888.087156 [03:55:02 -91503.480461] AUTODETECT spr round 2 (radius: 10) [03:57:37 -56690.461020] AUTODETECT spr round 3 (radius: 15) [04:00:20 -43553.024701] AUTODETECT spr round 4 (radius: 20) [04:03:40 -32791.561391] AUTODETECT spr round 5 (radius: 25) [04:07:58 -26947.163963] SPR radius for FAST iterations: 25 (autodetect) [04:07:58 -26947.163963] Model parameter optimization (eps = 3.000000) [04:08:30 -26889.685173] FAST spr round 1 (radius: 25) [04:10:58 -22084.475431] FAST spr round 2 (radius: 25) [04:13:00 -21071.452313] FAST spr round 3 (radius: 25) [04:14:47 -20946.567811] FAST spr round 4 (radius: 25) [04:16:33 -20937.066063] FAST spr round 5 (radius: 25) [04:17:51] [worker #4] ML tree search #10, logLikelihood: -20888.678648 [04:18:15 -20927.695542] FAST spr round 6 (radius: 25) [04:20:05 -20927.683371] Model parameter optimization (eps = 1.000000) [04:20:19 -20926.584260] SLOW spr round 1 (radius: 5) [04:22:23 -20913.375143] SLOW spr round 2 (radius: 5) [04:24:17 -20912.215892] SLOW spr round 3 (radius: 5) [04:26:09 -20912.215802] SLOW spr round 4 (radius: 10) [04:27:42] [worker #3] ML tree search #14, logLikelihood: -20892.086864 [04:28:18 -20911.911042] SLOW spr round 5 (radius: 5) [04:30:45 -20910.481779] SLOW spr round 6 (radius: 5) [04:32:52 -20910.481583] SLOW spr round 7 (radius: 10) [04:35:06 -20902.257898] SLOW spr round 8 (radius: 5) [04:37:33 -20897.980241] SLOW spr round 9 (radius: 5) [04:39:40 -20897.980237] SLOW spr round 10 (radius: 10) [04:41:47 -20897.980235] SLOW spr round 11 (radius: 15) [04:45:07 -20897.023534] SLOW spr round 12 (radius: 5) [04:47:38 -20897.023513] SLOW spr round 13 (radius: 10) [04:50:15 -20897.023511] SLOW spr round 14 (radius: 15) [04:51:16] [worker #2] ML tree search #13, logLikelihood: -20899.182927 [04:53:25 -20892.216507] SLOW spr round 15 (radius: 5) [04:55:55 -20892.216470] SLOW spr round 16 (radius: 10) [04:58:27 -20892.216468] SLOW spr round 17 (radius: 15) [05:01:35 -20890.813412] SLOW spr round 18 (radius: 5) [05:04:04 -20890.813410] SLOW spr round 19 (radius: 10) [05:06:37 -20890.813408] SLOW spr round 20 (radius: 15) [05:09:47 -20890.813406] SLOW spr round 21 (radius: 20) [05:14:53 -20890.813404] SLOW spr round 22 (radius: 25) [05:22:58 -20890.813403] Model parameter optimization (eps = 0.100000) [05:23:11] [worker #0] ML tree search #11, logLikelihood: -20890.428399 [05:23:11 -243174.921879] Initial branch length optimization [05:23:16 -193305.753694] Model parameter optimization (eps = 10.000000) [05:23:55 -192661.524917] AUTODETECT spr round 1 (radius: 5) [05:26:49 -90485.625752] AUTODETECT spr round 2 (radius: 10) [05:28:08] [worker #4] ML tree search #15, logLikelihood: -21349.901280 [05:29:19] [worker #1] ML tree search #17, logLikelihood: -20887.267114 [05:29:24 -53330.495845] AUTODETECT spr round 3 (radius: 15) [05:32:19 -37740.210580] AUTODETECT spr round 4 (radius: 20) [05:32:43] [worker #3] ML tree search #19, logLikelihood: -20887.217878 [05:35:30 -31473.125314] AUTODETECT spr round 5 (radius: 25) [05:38:55 -29990.526431] SPR radius for FAST iterations: 25 (autodetect) [05:38:55 -29990.526431] Model parameter optimization (eps = 3.000000) [05:39:22 -29916.866663] FAST spr round 1 (radius: 25) [05:41:47 -24545.539857] FAST spr round 2 (radius: 25) [05:43:48 -23553.925070] FAST spr round 3 (radius: 25) [05:45:40 -22478.935032] FAST spr round 4 (radius: 25) [05:47:31 -21519.644747] FAST spr round 5 (radius: 25) [05:49:19 -21245.518582] FAST spr round 6 (radius: 25) [05:51:06 -21144.857859] FAST spr round 7 (radius: 25) [05:53:00 -20975.132896] FAST spr round 8 (radius: 25) [05:54:44 -20949.744737] FAST spr round 9 (radius: 25) [05:56:26 -20949.628847] FAST spr round 10 (radius: 25) [05:58:11 -20949.628659] Model parameter optimization (eps = 1.000000) [05:58:35 -20947.918945] SLOW spr round 1 (radius: 5) [06:00:35 -20947.338572] SLOW spr round 2 (radius: 5) [06:02:27 -20946.636587] SLOW spr round 3 (radius: 5) [06:04:19 -20946.636537] SLOW spr round 4 (radius: 10) [06:04:24] [worker #2] ML tree search #18, logLikelihood: -20893.813792 [06:06:26 -20917.407882] SLOW spr round 5 (radius: 5) [06:08:49 -20913.879500] SLOW spr round 6 (radius: 5) [06:10:51 -20913.879344] SLOW spr round 7 (radius: 10) [06:12:56 -20911.618946] SLOW spr round 8 (radius: 5) [06:15:19 -20910.120924] SLOW spr round 9 (radius: 5) [06:17:22 -20910.120815] SLOW spr round 10 (radius: 10) [06:19:24 -20910.120813] SLOW spr round 11 (radius: 15) [06:22:33 -20910.046825] SLOW spr round 12 (radius: 20) [06:27:19 -20895.963168] SLOW spr round 13 (radius: 5) [06:29:52 -20894.376144] SLOW spr round 14 (radius: 5) [06:32:02 -20894.375967] SLOW spr round 15 (radius: 10) [06:34:05 -20894.375961] SLOW spr round 16 (radius: 15) [06:37:23 -20894.375935] SLOW spr round 17 (radius: 20) [06:42:34 -20894.375933] SLOW spr round 18 (radius: 25) [06:51:51 -20894.375931] Model parameter optimization (eps = 0.100000) [06:52:02] [worker #0] ML tree search #16, logLikelihood: -20894.005188 [07:25:46] [worker #4] ML tree search #20, logLikelihood: -20901.682948 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.420590,0.456806) (0.279970,0.581846) (0.250612,1.742517) (0.048828,4.265514) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Final LogLikelihood: -20886.251041 AIC score: 45782.502082 / AICc score: 8089842.502082 / BIC score: 52802.524795 Free parameters (model + branch lengths): 2005 WARNING: Number of free parameters (K=2005) is larger than alignment size (n=245). This might lead to overfitting and compromise tree inference results! Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/3_mltree/P14867.raxml.bestTree All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/3_mltree/P14867.raxml.mlTrees Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/3_mltree/P14867.raxml.bestModel Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/P14867/3_mltree/P14867.raxml.log Analysis started: 05-Jul-2021 14:06:17 / finished: 05-Jul-2021 21:32:03 Elapsed time: 26746.275 seconds Consumed energy: 1619.349 Wh (= 8 km in an electric car, or 40 km with an e-scooter!)