RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 02-Jun-2021 18:38:57 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/2_msa/P13716_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/3_mltree/P13716.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/4_raxmlng_ancestral/P13716 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622648337 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/2_msa/P13716_nogap_msa.fasta [00:00:00] Loaded alignment with 944 taxa and 330 sites WARNING: Sequences tr_J3K9W0_J3K9W0_COCIM_246410 and tr_E9CS73_E9CS73_COCPS_443226 are exactly identical! WARNING: Sequences tr_B6QRI6_B6QRI6_TALMQ_441960 and tr_A0A093X6D1_A0A093X6D1_TALMA_1077442 are exactly identical! WARNING: Sequences tr_B2W371_B2W371_PYRTR_426418 and tr_A0A2W1ERG6_A0A2W1ERG6_9PLEO_45151 are exactly identical! WARNING: Sequences tr_G2XEM0_G2XEM0_VERDV_498257 and tr_A0A0G4M2J0_A0A0G4M2J0_9PEZI_100787 are exactly identical! WARNING: Sequences tr_B8PBQ3_B8PBQ3_POSPM_561896 and tr_A0A1X6NCX9_A0A1X6NCX9_9APHY_670580 are exactly identical! WARNING: Sequences tr_A0A179V2Z8_A0A179V2Z8_BLAGS_559298 and tr_C5GYM0_C5GYM0_AJEDR_559297 are exactly identical! WARNING: Sequences tr_A0A2I3RKG7_A0A2I3RKG7_PANTR_9598 and tr_A0A2R9C7A2_A0A2R9C7A2_PANPA_9597 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_W7LNY8_W7LNY8_GIBM7_334819 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_A0A0D2XNB5_A0A0D2XNB5_FUSO4_426428 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_S0E1M3_S0E1M3_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_N4TJ78_N4TJ78_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_X0CAG0_X0CAG0_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_A0A2H3SYU0_A0A2H3SYU0_FUSOX_5507 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_A0A2H3GZE2_A0A2H3GZE2_FUSOX_327505 are exactly identical! WARNING: Sequences tr_F9F7A3_F9F7A3_FUSOF_660025 and tr_A0A2K0WBL6_A0A2K0WBL6_GIBNY_42673 are exactly identical! WARNING: Sequences tr_E9ESI7_E9ESI7_METRA_655844 and tr_A0A0D9PIJ5_A0A0D9PIJ5_METAN_1291518 are exactly identical! WARNING: Sequences tr_C6HQ95_C6HQ95_AJECH_544712 and tr_F0US66_F0US66_AJEC8_544711 are exactly identical! WARNING: Sequences tr_J4W543_J4W543_BEAB2_655819 and tr_A0A0A2VL16_A0A0A2VL16_BEABA_1245745 are exactly identical! WARNING: Sequences tr_G9NVL3_G9NVL3_HYPAI_452589 and tr_A0A0W7VQB3_A0A0W7VQB3_9HYPO_398673 are exactly identical! WARNING: Sequences tr_A0A0E0HV24_A0A0E0HV24_ORYNI_4536 and tr_A2YGS3_A2YGS3_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0HV24_A0A0E0HV24_ORYNI_4536 and tr_I1Q520_I1Q520_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0HV24_A0A0E0HV24_ORYNI_4536 and tr_A0A0E0E626_A0A0E0E626_9ORYZ_40149 are exactly identical! WARNING: Sequences tr_A0A0E0HV24_A0A0E0HV24_ORYNI_4536 and tr_A0A0E0Q2C1_A0A0E0Q2C1_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0HV24_A0A0E0HV24_ORYNI_4536 and tr_A0A0D3GKJ6_A0A0D3GKJ6_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0HV24_A0A0E0HV24_ORYNI_4536 and sp_Q5Z8V9_HEM2_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A2QPS5_A2QPS5_ASPNC_425011 and tr_G7XKY2_G7XKY2_ASPKW_1033177 are exactly identical! WARNING: Sequences tr_A2QPS5_A2QPS5_ASPNC_425011 and tr_A0A124BX50_A0A124BX50_ASPNG_5061 are exactly identical! WARNING: Sequences tr_A2QPS5_A2QPS5_ASPNC_425011 and tr_A0A146FUB2_A0A146FUB2_9EURO_1069201 are exactly identical! WARNING: Sequences tr_A2QPS5_A2QPS5_ASPNC_425011 and tr_A0A1L9NMI7_A0A1L9NMI7_ASPTU_767770 are exactly identical! WARNING: Sequences tr_A2QPS5_A2QPS5_ASPNC_425011 and tr_A0A1L9UQV3_A0A1L9UQV3_9EURO_767769 are exactly identical! WARNING: Sequences tr_A2QPS5_A2QPS5_ASPNC_425011 and tr_A0A319AA99_A0A319AA99_9EURO_1450533 are exactly identical! WARNING: Sequences tr_F4P281_F4P281_BATDJ_684364 and tr_A0A177WQT4_A0A177WQT4_BATDE_403673 are exactly identical! WARNING: Sequences tr_F9XP06_F9XP06_ZYMTI_336722 and tr_A0A1X7S850_A0A1X7S850_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_G2YAA7_G2YAA7_BOTF4_999810 and tr_M7UDA0_M7UDA0_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_A0A0R0KHB4_A0A0R0KHB4_SOYBN_3847 and sp_P43210_HEM2_SOYBN_3847 are exactly identical! WARNING: Sequences tr_F2SP23_F2SP23_TRIRC_559305 and tr_A0A178F4T5_A0A178F4T5_TRIRU_5551 are exactly identical! WARNING: Sequences tr_B3RN84_B3RN84_TRIAD_10228 and tr_A0A369SBU5_A0A369SBU5_9METZ_287889 are exactly identical! WARNING: Sequences tr_L8G3D7_L8G3D7_PSED2_658429 and tr_A0A1B8CRF3_A0A1B8CRF3_9PEZI_1622147 are exactly identical! WARNING: Sequences tr_M4DIE3_M4DIE3_BRARP_51351 and tr_A0A078HPM6_A0A078HPM6_BRANA_3708 are exactly identical! WARNING: Sequences tr_M7YHN3_M7YHN3_TRIUA_4572 and tr_F8WTQ5_F8WTQ5_WHEAT_4565 are exactly identical! WARNING: Sequences tr_W2QIZ7_W2QIZ7_PHYPN_761204 and tr_A0A0W8DQC1_A0A0W8DQC1_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2QIZ7_W2QIZ7_PHYPN_761204 and tr_W2LMP0_W2LMP0_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A010RA66_A0A010RA66_9PEZI_1445577 and tr_A0A135UUD4_A0A135UUD4_9PEZI_1209931 are exactly identical! WARNING: Sequences tr_A0A084QR42_A0A084QR42_STAC4_1283841 and tr_A0A084RD96_A0A084RD96_STACH_1283842 are exactly identical! WARNING: Sequences tr_A0A096P0T7_A0A096P0T7_PAPAN_9555 and tr_A0A0D9RJ67_A0A0D9RJ67_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A096P0T7_A0A096P0T7_PAPAN_9555 and tr_A0A2K5ZQT9_A0A2K5ZQT9_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A078FHA3_A0A078FHA3_BRANA_3708 and tr_A0A0D3CNL2_A0A0D3CNL2_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A094DZV7_A0A094DZV7_9PEZI_1420912 and tr_A0A1B8GM61_A0A1B8GM61_9PEZI_342668 are exactly identical! WARNING: Sequences tr_A0A094DZV7_A0A094DZV7_9PEZI_1420912 and tr_A0A1B8EJH8_A0A1B8EJH8_9PEZI_1622149 are exactly identical! WARNING: Sequences tr_A0A0D2TUT6_A0A0D2TUT6_GOSRA_29730 and tr_A0A1U8J9P2_A0A1U8J9P2_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0G0A8D5_A0A0G0A8D5_TRIHA_5544 and tr_A0A2T4A707_A0A2T4A707_TRIHA_983964 are exactly identical! WARNING: Sequences tr_A0A0F8WN70_A0A0F8WN70_9EURO_308745 and tr_A0A2T5M1F5_A0A2T5M1F5_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A0M9F196_A0A0M9F196_FUSLA_179993 and tr_I1S064_I1S064_GIBZE_229533 are exactly identical! WARNING: Sequences tr_A0A0M9F196_A0A0M9F196_FUSLA_179993 and tr_A0A1B8B8N3_A0A1B8B8N3_FUSPO_36050 are exactly identical! WARNING: Sequences tr_A0A0M9F196_A0A0M9F196_FUSLA_179993 and tr_A0A2T4GIM0_A0A2T4GIM0_FUSCU_5516 are exactly identical! WARNING: Sequences tr_A0A0M9F196_A0A0M9F196_FUSLA_179993 and tr_A0A2L2TPZ0_A0A2L2TPZ0_9HYPO_56646 are exactly identical! WARNING: Sequences tr_A0A0A1PCH1_A0A0A1PCH1_9FUNG_58291 and tr_A0A367KHB1_A0A367KHB1_9FUNG_86630 are exactly identical! WARNING: Sequences tr_A0A0S7E8M9_A0A0S7E8M9_9EURO_293939 and tr_A0A2I1CA44_A0A2I1CA44_9EURO_1392255 are exactly identical! WARNING: Sequences tr_A0A101MBU6_A0A101MBU6_9EURO_48697 and tr_A0A1V6NEZ4_A0A1V6NEZ4_9EURO_60169 are exactly identical! WARNING: Sequences tr_A0A164V921_A0A164V921_9HOMO_1314777 and tr_A0A166H7U5_A0A166H7U5_9HOMO_1314776 are exactly identical! WARNING: Sequences tr_A0A162I4N8_A0A162I4N8_9HYPO_1081107 and tr_A0A2N6NJ56_A0A2N6NJ56_BEABA_176275 are exactly identical! WARNING: Sequences tr_A0A1S4A3B3_A0A1S4A3B3_TOBAC_4097 and tr_A0A1S4AKW2_A0A1S4AKW2_TOBAC_4097 are exactly identical! WARNING: Sequences tr_A0A1S4A3B3_A0A1S4A3B3_TOBAC_4097 and tr_A0A314KRJ8_A0A314KRJ8_NICAT_49451 are exactly identical! WARNING: Sequences tr_A0A1S4A3B3_A0A1S4A3B3_TOBAC_4097 and tr_A0A1U7X7J1_A0A1U7X7J1_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1V8V4C8_A0A1V8V4C8_9PEZI_1974281 and tr_A0A1V8V7W9_A0A1V8V7W9_9PEZI_1974281 are exactly identical! WARNING: Sequences tr_A0A1V8V4C8_A0A1V8V4C8_9PEZI_1974281 and tr_A0A1V8SUP5_A0A1V8SUP5_9PEZI_1507870 are exactly identical! WARNING: Sequences tr_A0A2H5NNR0_A0A2H5NNR0_CITUN_55188 and tr_A0A2H5NPE9_A0A2H5NPE9_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A2U1LK48_A0A2U1LK48_ARTAN_35608 and tr_A0A2U1M929_A0A2U1M929_ARTAN_35608 are exactly identical! WARNING: Duplicate sequences found: 68 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/4_raxmlng_ancestral/P13716.raxml.reduced.phy Alignment comprises 1 partitions and 330 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 330 Gaps: 5.05 % Invariant sites: 0.30 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/4_raxmlng_ancestral/P13716.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/3_mltree/P13716.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 83 / 6640 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -113293.834337 [00:00:00 -113293.834337] Initial branch length optimization [00:00:00 -112992.941525] Model parameter optimization (eps = 0.100000) [00:00:27] Tree #1, final logLikelihood: -112608.017813 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.244733,0.398150) (0.334143,0.554439) (0.248275,1.036790) (0.172849,2.660635) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/4_raxmlng_ancestral/P13716.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/4_raxmlng_ancestral/P13716.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/4_raxmlng_ancestral/P13716.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P13716/4_raxmlng_ancestral/P13716.raxml.log Analysis started: 02-Jun-2021 18:38:57 / finished: 02-Jun-2021 18:39:28 Elapsed time: 30.906 seconds Consumed energy: 2.643 Wh