RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 03-Jun-2021 02:25:36 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/2_msa/P08559_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/3_mltree/P08559.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/4_raxmlng_ancestral/P08559 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622676336 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/2_msa/P08559_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 390 sites WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and tr_G3RRJ9_G3RRJ9_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and tr_H2PV27_H2PV27_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and tr_A0A2I3TIQ5_A0A2I3TIQ5_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and sp_P08559_ODPA_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and tr_F7HBL8_F7HBL8_MACMU_9544 are exactly identical! WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and tr_F6YAV3_F6YAV3_CALJA_9483 are exactly identical! WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and tr_A0A2K5P364_A0A2K5P364_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3GMH2_A0A2I3GMH2_NOMLE_61853 and tr_A0A2R9AS55_A0A2R9AS55_PANPA_9597 are exactly identical! WARNING: Sequences tr_J3KLE5_J3KLE5_COCIM_246410 and tr_A0A0J6YSU3_A0A0J6YSU3_COCIT_404692 are exactly identical! WARNING: Sequences tr_B2WLB2_B2WLB2_PYRTR_426418 and tr_A0A2W1D5F6_A0A2W1D5F6_9PLEO_45151 are exactly identical! WARNING: Sequences tr_G2X798_G2X798_VERDV_498257 and tr_A0A0G4M8W3_A0A0G4M8W3_9PEZI_100787 are exactly identical! WARNING: Sequences tr_Q7RYJ2_Q7RYJ2_NEUCR_367110 and tr_G4UN68_G4UN68_NEUT9_510952 are exactly identical! WARNING: Sequences tr_Q29IF7_Q29IF7_DROPS_46245 and tr_B4GV47_B4GV47_DROPE_7234 are exactly identical! WARNING: Sequences tr_A0A179UTJ0_A0A179UTJ0_BLAGS_559298 and tr_C5GNW4_C5GNW4_AJEDR_559297 are exactly identical! WARNING: Sequences tr_W5PYS5_W5PYS5_SHEEP_9940 and sp_A7MB35_ODPA_BOVIN_9913 are exactly identical! WARNING: Sequences tr_J5JW20_J5JW20_BEAB2_655819 and tr_A0A0A2VM97_A0A0A2VM97_BEABA_1245745 are exactly identical! WARNING: Sequences tr_J5JW20_J5JW20_BEAB2_655819 and tr_A0A2N6P0C7_A0A2N6P0C7_BEABA_176275 are exactly identical! WARNING: Sequences tr_A0A0E0HLG0_A0A0E0HLG0_ORYNI_4536 and tr_A0A0D9YY06_A0A0D9YY06_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0HLG0_A0A0E0HLG0_ORYNI_4536 and sp_Q6Z5N4_ODPA1_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_A2QPI1_A2QPI1_ASPNC_425011 and tr_G3XZM2_G3XZM2_ASPNA_380704 are exactly identical! WARNING: Sequences tr_A2QPI1_A2QPI1_ASPNC_425011 and tr_A0A319AMI9_A0A319AMI9_9EURO_1450533 are exactly identical! WARNING: Sequences tr_A2QWB4_A2QWB4_ASPNC_425011 and tr_A0A319AAL4_A0A319AAL4_9EURO_1450533 are exactly identical! WARNING: Sequences tr_G7XAB1_G7XAB1_ASPKW_1033177 and tr_A0A146F9P1_A0A146F9P1_9EURO_1069201 are exactly identical! WARNING: Sequences tr_G7XEK4_G7XEK4_ASPKW_1033177 and tr_A0A146F3E5_A0A146F3E5_9EURO_1069201 are exactly identical! WARNING: Sequences tr_G7XEK4_G7XEK4_ASPKW_1033177 and tr_A0A1L9MZW6_A0A1L9MZW6_ASPTU_767770 are exactly identical! WARNING: Sequences tr_G7XEK4_G7XEK4_ASPKW_1033177 and tr_A0A317W3Y6_A0A317W3Y6_9EURO_1448314 are exactly identical! WARNING: Sequences tr_F4P309_F4P309_BATDJ_684364 and tr_A0A177WLA1_A0A177WLA1_BATDE_403673 are exactly identical! WARNING: Sequences tr_I1P439_I1P439_ORYGL_4538 and tr_A0A0D3FAA2_A0A0D3FAA2_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_F9X7Z3_F9X7Z3_ZYMTI_336722 and tr_A0A1X7RP10_A0A1X7RP10_ZYMTR_1276538 are exactly identical! WARNING: Sequences tr_G2Y0M8_G2Y0M8_BOTF4_999810 and tr_M7UM99_M7UM99_BOTF1_1290391 are exactly identical! WARNING: Sequences tr_F2SVI8_F2SVI8_TRIRC_559305 and tr_A0A178EYJ2_A0A178EYJ2_TRIRU_5551 are exactly identical! WARNING: Sequences tr_A0A0D2XZL6_A0A0D2XZL6_FUSO4_426428 and tr_S0EG33_S0EG33_GIBF5_1279085 are exactly identical! WARNING: Sequences tr_A0A0D2XZL6_A0A0D2XZL6_FUSO4_426428 and tr_N4UBD7_N4UBD7_FUSC1_1229664 are exactly identical! WARNING: Sequences tr_A0A0D2XZL6_A0A0D2XZL6_FUSO4_426428 and tr_X0CUC4_X0CUC4_FUSOX_1089458 are exactly identical! WARNING: Sequences tr_A0A0D2XZL6_A0A0D2XZL6_FUSO4_426428 and tr_A0A2H3TI37_A0A2H3TI37_FUSOX_5507 are exactly identical! WARNING: Sequences tr_A0A0D2XZL6_A0A0D2XZL6_FUSO4_426428 and tr_A0A2H3GJW8_A0A2H3GJW8_FUSOX_327505 are exactly identical! WARNING: Sequences tr_A0A0D2XZL6_A0A0D2XZL6_FUSO4_426428 and tr_A0A365MX91_A0A365MX91_GIBIN_948311 are exactly identical! WARNING: Sequences tr_G7P5Y2_G7P5Y2_MACFA_9541 and tr_A0A2K6CYB8_A0A2K6CYB8_MACNE_9545 are exactly identical! WARNING: Sequences tr_L2FZI5_L2FZI5_COLFN_1213859 and tr_T0LBX2_T0LBX2_COLGC_1237896 are exactly identical! WARNING: Sequences tr_M4F2W6_M4F2W6_BRARP_51351 and tr_A0A078GDB8_A0A078GDB8_BRANA_3708 are exactly identical! WARNING: Sequences tr_M2TVT0_M2TVT0_COCH5_701091 and tr_W6YDR8_W6YDR8_COCCA_930089 are exactly identical! WARNING: Sequences tr_M2TVT0_M2TVT0_COCH5_701091 and tr_W6ZVZ3_W6ZVZ3_COCMI_930090 are exactly identical! WARNING: Sequences tr_V2XWX2_V2XWX2_MONRO_1381753 and tr_A0A0W0FKK3_A0A0W0FKK3_9AGAR_221103 are exactly identical! WARNING: Sequences tr_W2PS91_W2PS91_PHYPN_761204 and tr_A0A0W8BCM7_A0A0W8BCM7_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2PS91_W2PS91_PHYPN_761204 and tr_W2KJA7_W2KJA7_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A015LU90_A0A015LU90_9GLOM_1432141 and tr_U9T8D7_U9T8D7_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A078H9V9_A0A078H9V9_BRANA_3708 and tr_A0A0D3AA76_A0A0D3AA76_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A0F0IH60_A0A0F0IH60_ASPPU_1403190 and tr_A0A2G7G5A6_A0A2G7G5A6_9EURO_656916 are exactly identical! WARNING: Sequences tr_A0A0F8VJL2_A0A0F8VJL2_9EURO_308745 and tr_A0A2T5LX37_A0A2T5LX37_9EURO_1392256 are exactly identical! WARNING: Sequences tr_A0A0N4TNR7_A0A0N4TNR7_BRUPA_6280 and tr_A0A0R3QV76_A0A0R3QV76_9BILA_42155 are exactly identical! WARNING: Sequences tr_A0A0C9M909_A0A0C9M909_9FUNG_91626 and tr_A0A162ZSD9_A0A162ZSD9_MUCCL_747725 are exactly identical! WARNING: Sequences tr_A0A0V0WAV7_A0A0V0WAV7_9BILA_92179 and tr_A0A0V1LM45_A0A0V1LM45_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V1LT69_A0A0V1LT69_9BILA_6335 and tr_A0A0V0U8Z4_A0A0V0U8Z4_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0P1BBM1_A0A0P1BBM1_9BASI_401625 and tr_A0A316W421_A0A316W421_9BASI_1522189 are exactly identical! WARNING: Sequences tr_A0A117NN25_A0A117NN25_9EURO_48697 and tr_A0A1V6NNE9_A0A1V6NNE9_9EURO_60169 are exactly identical! WARNING: Sequences tr_I1RN88_I1RN88_GIBZE_229533 and tr_A0A2L2U2L4_A0A2L2U2L4_9HYPO_56646 are exactly identical! WARNING: Sequences tr_A0A165AJL1_A0A165AJL1_9HOMO_1314777 and tr_A0A166IRT7_A0A166IRT7_9HOMO_1314776 are exactly identical! WARNING: Sequences tr_A0A1S3L1E7_A0A1S3L1E7_SALSA_8030 and tr_B5X4R5_B5X4R5_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1F7ZXM1_A0A1F7ZXM1_9EURO_109264 and tr_A0A1S9DRA1_A0A1S9DRA1_ASPOZ_5062 are exactly identical! WARNING: Sequences tr_A0A2H3C919_A0A2H3C919_9AGAR_1076256 and tr_A0A284RLV4_A0A284RLV4_9AGAR_47428 are exactly identical! WARNING: Sequences tr_A0A2G5HPS4_A0A2G5HPS4_CERBT_122368 and tr_A0A2S6BTB2_A0A2S6BTB2_9PEZI_357750 are exactly identical! WARNING: Sequences tr_A0A2S7PXR6_A0A2S7PXR6_9HELO_2070414 and tr_A0A2S7P9C2_A0A2S7P9C2_9HELO_2070412 are exactly identical! WARNING: Sequences tr_A0A2G4SLL0_A0A2G4SLL0_9FUNG_1340429 and tr_A0A367J7C0_A0A367J7C0_9FUNG_86630 are exactly identical! WARNING: Duplicate sequences found: 63 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/4_raxmlng_ancestral/P08559.raxml.reduced.phy Alignment comprises 1 partitions and 390 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 390 Gaps: 6.44 % Invariant sites: 3.59 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/4_raxmlng_ancestral/P08559.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/3_mltree/P08559.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 98 / 7840 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -139650.005185 [00:00:00 -139650.005185] Initial branch length optimization [00:00:01 -137962.045911] Model parameter optimization (eps = 0.100000) [00:00:32] Tree #1, final logLikelihood: -137766.180687 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.199608,0.280477) (0.359496,0.455632) (0.220619,1.040552) (0.220278,2.499802) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/4_raxmlng_ancestral/P08559.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/4_raxmlng_ancestral/P08559.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/4_raxmlng_ancestral/P08559.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08559/4_raxmlng_ancestral/P08559.raxml.log Analysis started: 03-Jun-2021 02:25:36 / finished: 03-Jun-2021 02:26:12 Elapsed time: 35.738 seconds Consumed energy: 2.865 Wh