RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 03-Jun-2021 02:26:19 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/2_msa/P08235_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/3_mltree/P08235.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/4_raxmlng_ancestral/P08235 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622676379 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/2_msa/P08235_nogap_msa.fasta [00:00:00] Loaded alignment with 990 taxa and 984 sites WARNING: Sequences tr_A0A1D5NVI7_A0A1D5NVI7_CHICK_9031 and tr_G1NJI1_G1NJI1_MELGA_9103 are exactly identical! WARNING: Sequences tr_A0A1D5NVI7_A0A1D5NVI7_CHICK_9031 and tr_U3IYD5_U3IYD5_ANAPL_8839 are exactly identical! WARNING: Sequences tr_A0A1D5NVI7_A0A1D5NVI7_CHICK_9031 and tr_A0A091F5B7_A0A091F5B7_CORBR_85066 are exactly identical! WARNING: Sequences tr_A0A1D5NVI7_A0A1D5NVI7_CHICK_9031 and tr_A0A093QCI4_A0A093QCI4_9PASS_328815 are exactly identical! WARNING: Sequences tr_A0A1D5NVI7_A0A1D5NVI7_CHICK_9031 and tr_A0A091GGB5_A0A091GGB5_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A1D5NVI7_A0A1D5NVI7_CHICK_9031 and tr_A0A0A0ALX1_A0A0A0ALX1_CHAVO_50402 are exactly identical! WARNING: Sequences tr_F1NYP9_F1NYP9_CHICK_9031 and sp_P07812_PRGR_CHICK_9031 are exactly identical! WARNING: Sequences sp_O08580_ERR1_MOUSE_10090 and sp_Q5QJV7_ERR1_RAT_10116 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2J8TYL4_A0A2J8TYL4_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_K7DJ98_K7DJ98_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and sp_P11474_ERR1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_F7E0X8_F7E0X8_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_F1RQP2_F1RQP2_PIG_9823 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_F1MBX3_F1MBX3_BOVIN_9913 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A096NQ39_A0A096NQ39_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A0D9R4C8_A0A0D9R4C8_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2K5L8D5_A0A2K5L8D5_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2K6B4D5_A0A2K6B4D5_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2K5Z665_A0A2K5Z665_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2R9BL88_A0A2R9BL88_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2U4B129_A0A2U4B129_TURTR_9739 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2Y9PQ21_A0A2Y9PQ21_DELLE_9749 are exactly identical! WARNING: Sequences tr_G1QYL6_G1QYL6_NOMLE_61853 and tr_A0A2Y9EII0_A0A2Y9EII0_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2I2Y1Q8_A0A2I2Y1Q8_GORGO_9595 and tr_A0A2J8PK71_A0A2J8PK71_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2Y1Q8_A0A2I2Y1Q8_GORGO_9595 and tr_A0A0D9RHQ2_A0A0D9RHQ2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_A0A2I2Y1Q8_A0A2I2Y1Q8_GORGO_9595 and tr_A0A2R9B8V6_A0A2R9B8V6_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I2YDJ3_A0A2I2YDJ3_GORGO_9595 and tr_A0A2R9BT94_A0A2R9BT94_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A2I2ZN06_A0A2I2ZN06_GORGO_9595 and tr_A0A2I3T916_A0A2I3T916_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2ZN06_A0A2I2ZN06_GORGO_9595 and tr_G7NTZ4_G7NTZ4_MACFA_9541 are exactly identical! WARNING: Sequences tr_A0A2I2ZN06_A0A2I2ZN06_GORGO_9595 and tr_A0A2I3LJD1_A0A2I3LJD1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I2ZN06_A0A2I2ZN06_GORGO_9595 and tr_A0A2K6DWH0_A0A2K6DWH0_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I2ZN06_A0A2I2ZN06_GORGO_9595 and tr_A0A2K5ZZV6_A0A2K5ZZV6_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I2ZN06_A0A2I2ZN06_GORGO_9595 and tr_A0A2R9B4N7_A0A2R9B4N7_PANPA_9597 are exactly identical! WARNING: Sequences tr_F1PFF7_F1PFF7_CANLF_9615 and tr_G1MHZ6_G1MHZ6_AILME_9646 are exactly identical! WARNING: Sequences tr_F1PFF7_F1PFF7_CANLF_9615 and tr_M3X2Z4_M3X2Z4_FELCA_9685 are exactly identical! WARNING: Sequences tr_F1PFF7_F1PFF7_CANLF_9615 and tr_A0A2U3VHE1_A0A2U3VHE1_ODORO_9708 are exactly identical! WARNING: Sequences tr_A0A2I3SIM7_A0A2I3SIM7_PANTR_9598 and sp_O97775_ANDR_PANTR_9598 are exactly identical! WARNING: Sequences tr_H2Q8G2_H2Q8G2_PANTR_9598 and tr_A0A2R9AKJ3_A0A2R9AKJ3_PANPA_9597 are exactly identical! WARNING: Sequences tr_A0A3B5QIW1_A0A3B5QIW1_XIPMA_8083 and tr_A0A087Y9K1_A0A087Y9K1_POEFO_48698 are exactly identical! WARNING: Sequences tr_I3KWE2_I3KWE2_ORENI_8128 and tr_A0A2U9CKP3_A0A2U9CKP3_SCOMX_52904 are exactly identical! WARNING: Sequences tr_A0A1D5QDG2_A0A1D5QDG2_MACMU_9544 and tr_G8F2K3_G8F2K3_MACFA_9541 are exactly identical! WARNING: Sequences tr_H9FTF1_H9FTF1_MACMU_9544 and tr_G7P8J4_G7P8J4_MACFA_9541 are exactly identical! WARNING: Sequences tr_H9FTF1_H9FTF1_MACMU_9544 and tr_A0A0D9RIV3_A0A0D9RIV3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_H9FTF1_H9FTF1_MACMU_9544 and tr_A0A2K5NJE3_A0A2K5NJE3_CERAT_9531 are exactly identical! WARNING: Sequences tr_H9FTF1_H9FTF1_MACMU_9544 and tr_A0A2K6C3F2_A0A2K6C3F2_MACNE_9545 are exactly identical! WARNING: Sequences tr_H9FTF1_H9FTF1_MACMU_9544 and tr_A0A2K5YNL0_A0A2K5YNL0_MANLE_9568 are exactly identical! WARNING: Sequences tr_H0ZLY1_H0ZLY1_TAEGU_59729 and tr_A0A218V748_A0A218V748_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A2R8PCD0_A0A2R8PCD0_CALJA_9483 and tr_A0A091DBJ0_A0A091DBJ0_FUKDA_885580 are exactly identical! WARNING: Sequences tr_F7FPJ5_F7FPJ5_CALJA_9483 and sp_Q95171_ESR2_CALJA_9483 are exactly identical! WARNING: Sequences tr_F7IDY1_F7IDY1_CALJA_9483 and tr_G7PB19_G7PB19_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7IDY1_F7IDY1_CALJA_9483 and tr_A0A2I3LDG3_A0A2I3LDG3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G7PAI3_G7PAI3_MACFA_9541 and tr_A0A2K6C3F0_A0A2K6C3F0_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A096MV60_A0A096MV60_PAPAN_9555 and tr_A0A2K5YJS3_A0A2K5YJS3_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A151MLD8_A0A151MLD8_ALLMI_8496 and tr_A0A1U7R8I9_A0A1U7R8I9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A091KF60_A0A091KF60_EGRGA_188379 and tr_A0A091W043_A0A091W043_NIPNI_128390 are exactly identical! WARNING: Sequences tr_A0A226MWG0_A0A226MWG0_CALSU_9009 and tr_A0A226PPE0_A0A226PPE0_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0RQD1_A0A2D0RQD1_ICTPU_7998 and tr_A0A2D0RQD6_A0A2D0RQD6_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RQD1_A0A2D0RQD1_ICTPU_7998 and tr_A0A2D0RRC7_A0A2D0RRC7_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2D0RQD1_A0A2D0RQD1_ICTPU_7998 and tr_A0A2D0RRY2_A0A2D0RRY2_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2K6CS01_A0A2K6CS01_MACNE_9545 and tr_A0A2K6A1Z9_A0A2K6A1Z9_MANLE_9568 are exactly identical! WARNING: Duplicate sequences found: 60 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/4_raxmlng_ancestral/P08235.raxml.reduced.phy Alignment comprises 1 partitions and 984 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 984 Gaps: 49.14 % Invariant sites: 0.41 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/4_raxmlng_ancestral/P08235.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/3_mltree/P08235.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 246 / 19680 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -236883.626907 [00:00:00 -236883.626907] Initial branch length optimization [00:00:02 -198301.417215] Model parameter optimization (eps = 0.100000) [00:01:06] Tree #1, final logLikelihood: -197589.244793 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.118561,0.177172) (0.088664,0.233990) (0.233506,0.501630) (0.559269,1.503953) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/4_raxmlng_ancestral/P08235.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/4_raxmlng_ancestral/P08235.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/4_raxmlng_ancestral/P08235.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/P08235/4_raxmlng_ancestral/P08235.raxml.log Analysis started: 03-Jun-2021 02:26:19 / finished: 03-Jun-2021 02:27:34 Elapsed time: 75.676 seconds Consumed energy: 6.083 Wh