RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, 36 cores, 251 GB RAM RAxML-NG was called at 04-Jun-2021 13:44:23 as follows: raxml-ng --ancestral --msa /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/2_msa/P05129_nogap_msa.fasta --tree /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/3_mltree/P05129.raxml.bestTree_unrooted --model LG4X --prefix /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/4_raxmlng_ancestral/P05129 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622803463 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/2_msa/P05129_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 697 sites WARNING: Sequences sp_P63318_KPCG_MOUSE_10090 and sp_P63319_KPCG_RAT_10116 are exactly identical! WARNING: Sequences sp_P68404_KPCB_MOUSE_10090 and sp_P68403_KPCB_RAT_10116 are exactly identical! WARNING: Sequences sp_P05130_KPC1_DROME_7227 and tr_B4HTB4_B4HTB4_DROSE_7238 are exactly identical! WARNING: Sequences tr_A0A2I3HJQ3_A0A2I3HJQ3_NOMLE_61853 and tr_G3R5W0_G3R5W0_GORGO_9595 are exactly identical! WARNING: Sequences tr_A0A2I3HJQ3_A0A2I3HJQ3_NOMLE_61853 and tr_H2QAS6_H2QAS6_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1R6H4_G1R6H4_NOMLE_61853 and tr_G3QL13_G3QL13_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1R6H4_G1R6H4_NOMLE_61853 and tr_A0A2J8T0X8_A0A2J8T0X8_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_G3R8H1_G3R8H1_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_H2P6C3_H2P6C3_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_K7CBH8_K7CBH8_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and sp_Q02156_KPCE_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_F7BIC2_F7BIC2_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_G7PM48_G7PM48_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_A0A2I3LQL3_A0A2I3LQL3_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_A0A2K5NF50_A0A2K5NF50_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_A0A2K6BZK0_A0A2K6BZK0_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1S4U2_G1S4U2_NOMLE_61853 and tr_A0A2R9AUU7_A0A2R9AUU7_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QZ70_G3QZ70_GORGO_9595 and tr_H2Q8F2_H2Q8F2_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3QZ70_G3QZ70_GORGO_9595 and tr_A0A2R9AS27_A0A2R9AS27_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RCJ3_G3RCJ3_GORGO_9595 and tr_A0A2R9A580_A0A2R9A580_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_U3BPE0_U3BPE0_CALJA_9483 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_A0A096NTX9_A0A096NTX9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_A0A2K5LMT6_A0A2K5LMT6_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3RIN3_G3RIN3_GORGO_9595 and tr_A0A2K6CYI9_A0A2K6CYI9_MACNE_9545 are exactly identical! WARNING: Sequences tr_F1PDX2_F1PDX2_CANLF_9615 and sp_Q5PU49_KPCD_CANLF_9615 are exactly identical! WARNING: Sequences tr_K7DA70_K7DA70_PANTR_9598 and tr_A0A2R9AZV3_A0A2R9AZV3_PANPA_9597 are exactly identical! WARNING: Sequences tr_F7D3T6_F7D3T6_HORSE_9796 and tr_A0A2U4C8G1_A0A2U4C8G1_TURTR_9739 are exactly identical! WARNING: Sequences tr_F7D3T6_F7D3T6_HORSE_9796 and tr_A0A2Y9SNU2_A0A2Y9SNU2_PHYCD_9755 are exactly identical! WARNING: Sequences sp_P05696_KPCA_RAT_10116 and tr_A0A1U7QLD2_A0A1U7QLD2_MESAU_10036 are exactly identical! WARNING: Sequences tr_A0A158P293_A0A158P293_ATTCE_12957 and tr_A0A151I099_A0A151I099_9HYME_520822 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_G7PAH0_G7PAH0_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A096NVI4_A0A096NVI4_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A2K5KX36_A0A2K5KX36_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A2K6DL10_A0A2K6DL10_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7BUZ8_F7BUZ8_MACMU_9544 and tr_A0A2K6A797_A0A2K6A797_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7BYI4_F7BYI4_MACMU_9544 and tr_A0A0D9R2T7_A0A0D9R2T7_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7H3B3_F7H3B3_MACMU_9544 and tr_A0A0D9S5H3_A0A0D9S5H3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7H3B3_F7H3B3_MACMU_9544 and tr_A0A2K5M7E0_A0A2K5M7E0_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7H3B3_F7H3B3_MACMU_9544 and tr_A0A2K6CYX1_A0A2K6CYX1_MACNE_9545 are exactly identical! WARNING: Sequences tr_H9EU39_H9EU39_MACMU_9544 and tr_G7NZU6_G7NZU6_MACFA_9541 are exactly identical! WARNING: Sequences tr_H9EU39_H9EU39_MACMU_9544 and tr_A0A0D9RKU2_A0A0D9RKU2_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7I4K8_F7I4K8_CALJA_9483 and tr_A0A2I3N8C1_A0A2I3N8C1_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7I4K8_F7I4K8_CALJA_9483 and tr_A0A2K5L6M3_A0A2K5L6M3_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7I4K8_F7I4K8_CALJA_9483 and tr_A0A2K6B2U4_A0A2K6B2U4_MACNE_9545 are exactly identical! WARNING: Sequences tr_D2HYP8_D2HYP8_AILME_9646 and tr_A0A2U3WL05_A0A2U3WL05_ODORO_9708 are exactly identical! WARNING: Sequences tr_G7PE62_G7PE62_MACFA_9541 and tr_A0A0D9RM39_A0A0D9RM39_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G7PE62_G7PE62_MACFA_9541 and tr_A0A2K6B686_A0A2K6B686_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7PE62_G7PE62_MACFA_9541 and tr_A0A2K5YIL7_A0A2K5YIL7_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3VWV6_M3VWV6_FELCA_9685 and tr_A0A2Y9IG42_A0A2Y9IG42_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3XF13_M3XF13_FELCA_9685 and tr_A0A2Y9JKQ9_A0A2Y9JKQ9_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A096NG19_A0A096NG19_PAPAN_9555 and tr_A0A2K5MBX9_A0A2K5MBX9_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A096NG19_A0A096NG19_PAPAN_9555 and tr_A0A2K6A1K4_A0A2K6A1K4_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0D9RLN1_A0A0D9RLN1_CHLSB_60711 and tr_A0A2K5YJ45_A0A2K5YJ45_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0V0RZK6_A0A0V0RZK6_9BILA_6336 and tr_A0A0V0W3K1_A0A0V0W3K1_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V0RZK6_A0A0V0RZK6_9BILA_6336 and tr_A0A0V1LHX8_A0A0V1LHX8_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0RZK6_A0A0V0RZK6_9BILA_6336 and tr_A0A0V0TN94_A0A0V0TN94_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0X6Z2_A0A0V0X6Z2_9BILA_92179 and tr_A0A0V1LM55_A0A0V1LM55_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V0X6Z2_A0A0V0X6Z2_9BILA_92179 and tr_A0A0V1P6B8_A0A0V1P6B8_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1N3N8_A0A0V1N3N8_9BILA_268474 and tr_A0A0V1H5V9_A0A0V1H5V9_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A2D0QNY7_A0A2D0QNY7_ICTPU_7998 and tr_A0A2D0QPR0_A0A2D0QPR0_ICTPU_7998 are exactly identical! WARNING: Duplicate sequences found: 60 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/4_raxmlng_ancestral/P05129.raxml.reduced.phy Alignment comprises 1 partitions and 697 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 697 Gaps: 20.66 % Invariant sites: 0.29 % NOTE: Binary MSA file created: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/4_raxmlng_ancestral/P05129.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/3_mltree/P05129.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 175 / 14000 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -177613.874980 [00:00:00 -177613.874980] Initial branch length optimization [00:00:01 -176970.168401] Model parameter optimization (eps = 0.100000) [00:00:36] Tree #1, final logLikelihood: -176525.762426 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.209774,0.265796) (0.229935,0.405851) (0.296909,0.888370) (0.263382,2.229304) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/4_raxmlng_ancestral/P05129.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/4_raxmlng_ancestral/P05129.raxml.ancestralStates Node-labeled tree saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/4_raxmlng_ancestral/P05129.raxml.ancestralTree Execution log saved to: /cta/users/eakkoyun/WORKFOLDER/PROD/run_020621/phylogeny-snakemake/results/P05129/4_raxmlng_ancestral/P05129.raxml.log Analysis started: 04-Jun-2021 13:44:23 / finished: 04-Jun-2021 13:45:05 Elapsed time: 42.170 seconds