RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 17:45:23 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/2_msa/O95947_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/4_raxmlng_ancestral/O95947 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626101123 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/2_msa/O95947_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 436 sites WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and tr_G3RCB5_G3RCB5_GORGO_9595 are exactly identical! WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and tr_G1T321_G1T321_RABIT_9986 are exactly identical! WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and sp_Q96SF7_TBX15_HUMAN_9606 are exactly identical! WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and tr_A0A2I2UY24_A0A2I2UY24_FELCA_9685 are exactly identical! WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and tr_A0A2K5LR15_A0A2K5LR15_CERAT_9531 are exactly identical! WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and tr_A0A2K5YJW2_A0A2K5YJW2_MANLE_9568 are exactly identical! WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and tr_A0A2U3WRJ7_A0A2U3WRJ7_ODORO_9708 are exactly identical! WARNING: Sequences tr_M3XR34_M3XR34_MUSPF_9669 and tr_A0A2Y9IWN0_A0A2Y9IWN0_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2I3HGG6_A0A2I3HGG6_NOMLE_61853 and tr_A0A2I3T7H8_A0A2I3T7H8_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I3HGG6_A0A2I3HGG6_NOMLE_61853 and tr_A0A096MW81_A0A096MW81_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I3HGG6_A0A2I3HGG6_NOMLE_61853 and tr_A0A2K5MT14_A0A2K5MT14_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A2I3HGG6_A0A2I3HGG6_NOMLE_61853 and tr_A0A2K6ARE0_A0A2K6ARE0_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I3HGG6_A0A2I3HGG6_NOMLE_61853 and tr_A0A2K5XDI3_A0A2K5XDI3_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_H2PMD8_H2PMD8_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_H2QUF0_H2QUF0_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and sp_Q9UMR3_TBX20_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_F7E831_F7E831_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_G7P0F2_G7P0F2_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_A0A096N256_A0A096N256_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_A0A0D9RR04_A0A0D9RR04_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_A0A2K5NJX0_A0A2K5NJX0_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1QLX5_G1QLX5_NOMLE_61853 and tr_A0A2K5XI87_A0A2K5XI87_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3I5G4_G3I5G4_CRIGR_10029 and tr_A0A0G2KAH3_A0A0G2KAH3_RAT_10116 are exactly identical! WARNING: Sequences tr_G3I5G4_G3I5G4_CRIGR_10029 and tr_A0A1U7QGM5_A0A1U7QGM5_MESAU_10036 are exactly identical! WARNING: Sequences tr_G3RD44_G3RD44_GORGO_9595 and tr_A0A2J8XKH3_A0A2J8XKH3_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3RD44_G3RD44_GORGO_9595 and sp_Q99593_TBX5_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RD44_G3RD44_GORGO_9595 and tr_A0A2I3M7F5_A0A2I3M7F5_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3RD44_G3RD44_GORGO_9595 and tr_A0A0D9S4A3_A0A0D9S4A3_CHLSB_60711 are exactly identical! WARNING: Sequences tr_G3RD44_G3RD44_GORGO_9595 and tr_A0A2K5LIE8_A0A2K5LIE8_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3RD44_G3RD44_GORGO_9595 and tr_A0A2R9A5H2_A0A2R9A5H2_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2N668_H2N668_PONAB_9601 and tr_F7H8C1_F7H8C1_MACMU_9544 are exactly identical! WARNING: Sequences tr_Q29F61_Q29F61_DROPS_46245 and tr_B4HB13_B4HB13_DROPE_7234 are exactly identical! WARNING: Sequences tr_Q29F62_Q29F62_DROPS_46245 and tr_B4HB14_B4HB14_DROPE_7234 are exactly identical! WARNING: Sequences tr_H2Q985_H2Q985_PANTR_9598 and tr_A0A2R9B6S2_A0A2R9B6S2_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QDL3_H2QDL3_PANTR_9598 and sp_Q13207_TBX2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2QTC7_H2QTC7_PANTR_9598 and sp_O95935_TBX18_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2QTC7_H2QTC7_PANTR_9598 and tr_A0A2R9A1N2_A0A2R9A1N2_PANPA_9597 are exactly identical! WARNING: Sequences tr_F6ZEH2_F6ZEH2_MACMU_9544 and tr_A0A2K6BSZ7_A0A2K6BSZ7_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7CBI6_F7CBI6_MACMU_9544 and tr_A0A096NF47_A0A096NF47_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F7CBI6_F7CBI6_MACMU_9544 and tr_A0A0D9RXR9_A0A0D9RXR9_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7CBI6_F7CBI6_MACMU_9544 and tr_A0A2K5LXF7_A0A2K5LXF7_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7CBI6_F7CBI6_MACMU_9544 and tr_A0A2K6BJK6_A0A2K6BJK6_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7FPV2_F7FPV2_MACMU_9544 and tr_A0A2K6C115_A0A2K6C115_MACNE_9545 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0S2J6_A0A0V0S2J6_9BILA_6336 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1D342_A0A0V1D342_TRIBR_45882 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0WIN9_A0A0V0WIN9_9BILA_92179 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0VGY9_A0A0V0VGY9_9BILA_181606 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1L6A2_A0A0V1L6A2_9BILA_6335 are exactly identical! WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0TYX1_A0A0V0TYX1_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A2R8PB87_A0A2R8PB87_CALJA_9483 and tr_A0A096MW07_A0A096MW07_PAPAN_9555 are exactly identical! WARNING: Sequences tr_D2HA06_D2HA06_AILME_9646 and tr_A0A2U3X3N1_A0A2U3X3N1_ODORO_9708 are exactly identical! WARNING: Sequences tr_D2HA06_D2HA06_AILME_9646 and tr_A0A2U3XRT2_A0A2U3XRT2_LEPWE_9713 are exactly identical! WARNING: Sequences tr_G1MDV6_G1MDV6_AILME_9646 and tr_A0A384D122_A0A384D122_URSMA_29073 are exactly identical! WARNING: Sequences tr_A0A2I3MUK3_A0A2I3MUK3_PAPAN_9555 and tr_A0A2K5MEZ9_A0A2K5MEZ9_CERAT_9531 are exactly identical! WARNING: Sequences tr_A0A151M3U9_A0A151M3U9_ALLMI_8496 and tr_A0A1U7RSR8_A0A1U7RSR8_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151N4K8_A0A151N4K8_ALLMI_8496 and tr_A0A3Q0FNC3_A0A3Q0FNC3_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151P2D7_A0A151P2D7_ALLMI_8496 and tr_A0A1U7RIZ4_A0A1U7RIZ4_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A091GAR1_A0A091GAR1_9AVES_55661 are exactly identical! WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A0A0AN11_A0A0A0AN11_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A091I0I4_A0A091I0I4_CALAN_9244 are exactly identical! WARNING: Sequences tr_A0A2I0LZ12_A0A2I0LZ12_COLLI_8932 and tr_A0A1V4JR48_A0A1V4JR48_PATFA_372326 are exactly identical! WARNING: Sequences tr_A0A1S3H0C4_A0A1S3H0C4_LINUN_7574 and tr_A0A1S3H0J1_A0A1S3H0J1_LINUN_7574 are exactly identical! WARNING: Sequences tr_A0A226MNG5_A0A226MNG5_CALSU_9009 and tr_A0A226P9A9_A0A226P9A9_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226NBM1_A0A226NBM1_CALSU_9009 and tr_A0A226PG36_A0A226PG36_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226NMG6_A0A226NMG6_CALSU_9009 and tr_A0A226P952_A0A226P952_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2D0QC04_A0A2D0QC04_ICTPU_7998 and tr_A0A2D0QD34_A0A2D0QD34_ICTPU_7998 are exactly identical! WARNING: Sequences tr_A0A2U3V2W3_A0A2U3V2W3_TURTR_9739 and tr_A0A2Y9P1V7_A0A2Y9P1V7_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U3V2W3_A0A2U3V2W3_TURTR_9739 and tr_A0A2Y9FRV6_A0A2Y9FRV6_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2U3V2W3_A0A2U3V2W3_TURTR_9739 and tr_A0A384A4W5_A0A384A4W5_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2U4BCE5_A0A2U4BCE5_TURTR_9739 and tr_A0A2Y9PAP7_A0A2Y9PAP7_DELLE_9749 are exactly identical! WARNING: Sequences tr_A0A2U3X3S9_A0A2U3X3S9_ODORO_9708 and tr_A0A2U3Y6J4_A0A2U3Y6J4_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A2U3X3S9_A0A2U3X3S9_ODORO_9708 and tr_A0A2Y9KNT3_A0A2Y9KNT3_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2Y9LAN0_A0A2Y9LAN0_DELLE_9749 and tr_A0A2Y9ELR5_A0A2Y9ELR5_PHYCD_9755 are exactly identical! WARNING: Duplicate sequences found: 73 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/4_raxmlng_ancestral/O95947.raxml.reduced.phy Alignment comprises 1 partitions and 436 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 436 Gaps: 27.96 % Invariant sites: 2.29 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/4_raxmlng_ancestral/O95947.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 109 / 8720 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -164084.672624 [00:00:00 -164084.672624] Initial branch length optimization [00:00:01 -120972.243854] Model parameter optimization (eps = 0.100000) [00:00:48] Tree #1, final logLikelihood: -120461.229447 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.101971,0.064803) (0.164545,0.158371) (0.185030,0.400652) (0.548455,1.628575) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/4_raxmlng_ancestral/O95947.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/4_raxmlng_ancestral/O95947.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/4_raxmlng_ancestral/O95947.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/4_raxmlng_ancestral/O95947.raxml.log Analysis started: 12-Jul-2021 17:45:23 / finished: 12-Jul-2021 17:46:16 Elapsed time: 52.542 seconds Consumed energy: 4.663 Wh