RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab.
Developed by: Alexey M. Kozlov and Alexandros Stamatakis.
Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth.
Latest version: https://github.com/amkozlov/raxml-ng
Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml

System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM

RAxML-NG was called at 30-Jun-2021 18:32:05 as follows:

raxml-ng --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/2_msa/O95947_trimmed_msa.fasta --data-type AA --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947 --seed 2 --threads 4 --tree rand{20} pars{20}

Analysis options:
  run mode: ML tree search
  start tree(s): random (20)
  random seed: 2
  tip-inner: OFF
  pattern compression: ON
  per-rate scalers: OFF
  site repeats: ON
  fast spr radius: AUTO
  spr subtree cutoff: 1.000000
  branch lengths: proportional (ML estimate, algorithm: NR-FAST)
  SIMD kernels: AVX2
  parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF

[00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/2_msa/O95947_trimmed_msa.fasta
[00:00:00] Loaded alignment with 1001 taxa and 178 sites

WARNING: Sequences tr_B4QMP3_B4QMP3_DROSI_7240 and tr_B4HKJ9_B4HKJ9_DROSE_7238 are exactly identical!
WARNING: Sequences tr_B4QMP3_B4QMP3_DROSI_7240 and tr_A0A1W4UZI4_A0A1W4UZI4_DROFC_30025 are exactly identical!
WARNING: Sequences tr_B4QMP6_B4QMP6_DROSI_7240 and tr_Q9U8L5_Q9U8L5_DROME_7227 are exactly identical!
WARNING: Sequences tr_B4QMP6_B4QMP6_DROSI_7240 and tr_B4HKK3_B4HKK3_DROSE_7238 are exactly identical!
WARNING: Sequences tr_B4QMP6_B4QMP6_DROSI_7240 and tr_A0A1W4UZH4_A0A1W4UZH4_DROFC_30025 are exactly identical!
WARNING: Sequences tr_E9FYB6_E9FYB6_DAPPU_6669 and tr_A0A162CNP9_A0A162CNP9_9CRUS_35525 are exactly identical!
WARNING: Sequences tr_B0S5M8_B0S5M8_DANRE_7955 and tr_A0A2D0R1X3_A0A2D0R1X3_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_B0S5M8_B0S5M8_DANRE_7955 and tr_A0A2D0R1X8_A0A2D0R1X8_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_B8JKS6_B8JKS6_DANRE_7955 and tr_G3PX20_G3PX20_GASAC_69293 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and sp_O73718_TBX3_CHICK_9031 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_H9H1Q8_H9H1Q8_MELGA_9103 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_F7GF71_F7GF71_MONDO_13616 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_G3VNU1_G3VNU1_SARHA_9305 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_U3JZC9_U3JZC9_FICAL_59894 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A151N4S6_A0A151N4S6_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A0Q3TRC3_A0A0Q3TRC3_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A091F9X8_A0A091F9X8_CORBR_85066 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A091W2A3_A0A091W2A3_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A087QRY7_A0A087QRY7_APTFO_9233 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A093H4B3_A0A093H4B3_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A3Q0FQS0_A0A3Q0FQS0_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A1V4JRL7_A0A1V4JRL7_PATFA_372326 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A218V2P6_A0A218V2P6_9PASE_299123 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A226MNG5_A0A226MNG5_CALSU_9009 are exactly identical!
WARNING: Sequences tr_A0A1D5NXF3_A0A1D5NXF3_CHICK_9031 and tr_A0A226P9A9_A0A226P9A9_COLVI_9014 are exactly identical!
WARNING: Sequences tr_A0A1D5P5K9_A0A1D5P5K9_CHICK_9031 and tr_A0A226N123_A0A226N123_CALSU_9009 are exactly identical!
WARNING: Sequences tr_A0A1D5P898_A0A1D5P898_CHICK_9031 and tr_G1NFK4_G1NFK4_MELGA_9103 are exactly identical!
WARNING: Sequences tr_A0A1D5P898_A0A1D5P898_CHICK_9031 and tr_A0A2I0MNK6_A0A2I0MNK6_COLLI_8932 are exactly identical!
WARNING: Sequences tr_A0A1D5P898_A0A1D5P898_CHICK_9031 and tr_A0A1V4KER3_A0A1V4KER3_PATFA_372326 are exactly identical!
WARNING: Sequences tr_F1P3K1_F1P3K1_CHICK_9031 and sp_P79779_TBX6L_CHICK_9031 are exactly identical!
WARNING: Sequences tr_F1P3K1_F1P3K1_CHICK_9031 and tr_G1N6R8_G1N6R8_MELGA_9103 are exactly identical!
WARNING: Sequences tr_F1P3K1_F1P3K1_CHICK_9031 and tr_A0A226NAR7_A0A226NAR7_CALSU_9009 are exactly identical!
WARNING: Sequences tr_F1P3K1_F1P3K1_CHICK_9031 and tr_A0A226NZQ4_A0A226NZQ4_COLVI_9014 are exactly identical!
WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_G1N6N4_G1N6N4_MELGA_9103 are exactly identical!
WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_U3JSE6_U3JSE6_FICAL_59894 are exactly identical!
WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_U3IMS3_U3IMS3_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A151N615_A0A151N615_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A218UUH3_A0A218UUH3_9PASE_299123 are exactly identical!
WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A226NBM1_A0A226NBM1_CALSU_9009 are exactly identical!
WARNING: Sequences tr_O93288_O93288_CHICK_9031 and tr_A0A226PG36_A0A226PG36_COLVI_9014 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_M3XUD7_M3XUD7_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G1PUU2_G1PUU2_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G3GU42_G3GU42_CRIGR_10029 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G3RD44_G3RD44_GORGO_9595 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2J8XKH3_A0A2J8XKH3_PONAB_9601 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G1NCF9_G1NCF9_MELGA_9103 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G1T3X5_G1T3X5_RABIT_9986 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_E2RC42_E2RC42_CANLF_9615 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H2Q6Y5_H2Q6Y5_PANTR_9598 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F6Z6Q0_F6Z6Q0_HORSE_9796 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_W5P9H4_W5P9H4_SHEEP_9940 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_I3M1W0_I3M1W0_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H0XEW0_H0XEW0_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H0VRB3_H0VRB3_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and sp_Q99593_TBX5_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F7FPV2_F7FPV2_MACMU_9544 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G5AKX8_G5AKX8_HETGA_10181 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_G3T515_G3T515_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F7I9Q2_F7I9Q2_CALJA_9483 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F1RKD2_F1RKD2_PIG_9823 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_H2ZYZ3_H2ZYZ3_LATCH_7897 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_D2HSK1_D2HSK1_AILME_9646 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_F1MP50_F1MP50_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_L5KWD8_L5KWD8_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_M3W4A8_M3W4A8_FELCA_9685 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_U3JZB8_U3JZB8_FICAL_59894 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2I3M7F5_A0A2I3M7F5_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A091CVW1_A0A091CVW1_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A0D9S4A3_A0A0D9S4A3_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A151N4K8_A0A151N4K8_ALLMI_8496 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2I0LZ12_A0A2I0LZ12_COLLI_8932 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1S3EZH1_A0A1S3EZH1_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1U7UBD8_A0A1U7UBD8_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A3Q0FNC3_A0A3Q0FNC3_ALLSI_38654 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1U8C6V5_A0A1U8C6V5_MESAU_10036 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A1V4JR48_A0A1V4JR48_PATFA_372326 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A218V2M9_A0A218V2M9_9PASE_299123 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A226MP22_A0A226MP22_CALSU_9009 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A226P8X2_A0A226P8X2_COLVI_9014 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2K5LIE8_A0A2K5LIE8_CERAT_9531 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2K6C115_A0A2K6C115_MACNE_9545 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2K5YAB5_A0A2K5YAB5_MANLE_9568 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2R9A5H2_A0A2R9A5H2_PANPA_9597 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2U3X4Q4_A0A2U3X4Q4_ODORO_9708 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9DR84_A0A2Y9DR84_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9KP97_A0A2Y9KP97_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9LAN0_A0A2Y9LAN0_DELLE_9749 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A2Y9ELR5_A0A2Y9ELR5_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A384BX27_A0A384BX27_URSMA_29073 are exactly identical!
WARNING: Sequences sp_Q9PWE8_TBX5_CHICK_9031 and tr_A0A383Z6Y0_A0A383Z6Y0_BALAS_310752 are exactly identical!
WARNING: Sequences sp_A2AWL7_MGAP_MOUSE_10090 and tr_D3ZP58_D3ZP58_RAT_10116 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_M3XR34_M3XR34_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_G1NZ22_G1NZ22_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_G3RCB5_G3RCB5_GORGO_9595 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_H2N668_H2N668_PONAB_9601 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_G1T321_G1T321_RABIT_9986 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_E2RL25_E2RL25_CANLF_9615 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2I3RLL6_A0A2I3RLL6_PANTR_9598 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_F7D2N6_F7D2N6_MONDO_13616 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_F6VPR5_F6VPR5_HORSE_9796 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_W5QGN3_W5QGN3_SHEEP_9940 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_D3ZJ07_D3ZJ07_RAT_10116 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_I3MK95_I3MK95_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A286X9P1_A0A286X9P1_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and sp_Q96SF7_TBX15_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_F7H8C1_F7H8C1_MACMU_9544 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_G5BDM4_G5BDM4_HETGA_10181 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_G3TKU5_G3TKU5_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_G3WHS9_G3WHS9_SARHA_9305 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2R8PB87_A0A2R8PB87_CALJA_9483 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_G7NX62_G7NX62_MACFA_9541 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_L5K5B6_L5K5B6_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2I2UY24_A0A2I2UY24_FELCA_9685 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A096MW07_A0A096MW07_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A091DQC4_A0A091DQC4_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A0D9S627_A0A0D9S627_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A3Q0EB42_A0A3Q0EB42_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2K5LR15_A0A2K5LR15_CERAT_9531 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2K6CUH6_A0A2K6CUH6_MACNE_9545 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2K5YJW2_A0A2K5YJW2_MANLE_9568 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2R9B7V9_A0A2R9B7V9_PANPA_9597 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2U4A149_A0A2U4A149_TURTR_9739 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2U3WRJ7_A0A2U3WRJ7_ODORO_9708 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2Y9IWN0_A0A2Y9IWN0_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2Y9PAV3_A0A2Y9PAV3_DELLE_9749 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A2Y9FI70_A0A2Y9FI70_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_O70306_TBX15_MOUSE_10090 and tr_A0A384DC19_A0A384DC19_URSMA_29073 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_M3XUE1_M3XUE1_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2I3HGG6_A0A2I3HGG6_NOMLE_61853 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_G1P9L1_G1P9L1_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_G3GU43_G3GU43_CRIGR_10029 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2I2YWL2_A0A2I2YWL2_GORGO_9595 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_H2NIS5_H2NIS5_PONAB_9601 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_G1T7Q7_G1T7Q7_RABIT_9986 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_E2RB25_E2RB25_CANLF_9615 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2I3T7H8_A0A2I3T7H8_PANTR_9598 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_F6ZHS6_F6ZHS6_HORSE_9796 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_W5P8D6_W5P8D6_SHEEP_9940 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and sp_Q7TST9_TBX3_RAT_10116 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A287CVB8_A0A287CVB8_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_H0XEW6_H0XEW6_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_H0V224_H0V224_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and sp_O15119_TBX3_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_F6WW74_F6WW74_MACMU_9544 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_G5AKX9_G5AKX9_HETGA_10181 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_G3SRE9_G3SRE9_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_F7HRE2_F7HRE2_CALJA_9483 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_F1RKD4_F1RKD4_PIG_9823 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_G1L2P7_G1L2P7_AILME_9646 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_G7PIR9_G7PIR9_MACFA_9541 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_E1BK57_E1BK57_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_L5KWX6_L5KWX6_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A337SNR2_A0A337SNR2_FELCA_9685 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A096MW81_A0A096MW81_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A0D9S4A5_A0A0D9S4A5_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A1S3WJ78_A0A1S3WJ78_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A1S3F1V1_A0A1S3F1V1_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A3Q0ELW6_A0A3Q0ELW6_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2K5MT14_A0A2K5MT14_CERAT_9531 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2K6ARE0_A0A2K6ARE0_MACNE_9545 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2K5XDI3_A0A2K5XDI3_MANLE_9568 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2R9A6F2_A0A2R9A6F2_PANPA_9597 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2U3X3S9_A0A2U3X3S9_ODORO_9708 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2U3Y6J4_A0A2U3Y6J4_LEPWE_9713 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2Y9DQG7_A0A2Y9DQG7_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2Y9KNT3_A0A2Y9KNT3_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2Y9LAH3_A0A2Y9LAH3_DELLE_9749 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A2Y9SHI7_A0A2Y9SHI7_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_P70324_TBX3_MOUSE_10090 and tr_A0A383ZYC3_A0A383ZYC3_BALAS_310752 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_M3YUP7_M3YUP7_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1QHV7_G1QHV7_NOMLE_61853 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1PIU7_G1PIU7_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G3H9F0_G3H9F0_CRIGR_10029 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_H2NV87_H2NV87_PONAB_9601 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1T025_G1T025_RABIT_9986 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_E2RHN2_E2RHN2_CANLF_9615 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and sp_Q861Q9_TBX4_CANLF_9615 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_H2QDL4_H2QDL4_PANTR_9598 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_F6WIB7_F6WIB7_HORSE_9796 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_D4A0A2_D4A0A2_RAT_10116 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_I3MDG3_I3MDG3_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_H0WWD4_H0WWD4_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and sp_P57082_TBX4_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_F6ZEH2_F6ZEH2_MACMU_9544 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G5BAX4_G5BAX4_HETGA_10181 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G3SYH1_G3SYH1_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G1LQE0_G1LQE0_AILME_9646 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_G7PUI0_G7PUI0_MACFA_9541 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_F1MTT6_F1MTT6_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_M3XF21_M3XF21_FELCA_9685 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A096P4Y5_A0A096P4Y5_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A091DJ77_A0A091DJ77_FUKDA_885580 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A1S3WLT2_A0A1S3WLT2_ERIEU_9365 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A1S3EWA4_A0A1S3EWA4_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A3Q0EK02_A0A3Q0EK02_TARSY_1868482 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A3Q0D1Z8_A0A3Q0D1Z8_MESAU_10036 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2K5MRJ4_A0A2K5MRJ4_CERAT_9531 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2K6BSZ7_A0A2K6BSZ7_MACNE_9545 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2K5ZXI5_A0A2K5ZXI5_MANLE_9568 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2R9BRB8_A0A2R9BRB8_PANPA_9597 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2U3ZD31_A0A2U3ZD31_ODORO_9708 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2Y9FXA8_A0A2Y9FXA8_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2Y9JX87_A0A2Y9JX87_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A2Y9LHZ8_A0A2Y9LHZ8_DELLE_9749 are exactly identical!
WARNING: Sequences sp_P70325_TBX4_MOUSE_10090 and tr_A0A384ASQ0_A0A384ASQ0_BALAS_310752 are exactly identical!
WARNING: Sequences sp_P70327_TBX6_MOUSE_10090 and tr_G3I4H4_G3I4H4_CRIGR_10029 are exactly identical!
WARNING: Sequences sp_P70327_TBX6_MOUSE_10090 and sp_D3ZJK7_TBX6_RAT_10116 are exactly identical!
WARNING: Sequences sp_P70327_TBX6_MOUSE_10090 and tr_A0A1U7Q6S9_A0A1U7Q6S9_MESAU_10036 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_M3YUJ8_M3YUJ8_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G1PIT1_G1PIT1_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and sp_Q863A2_TBX2_CANLF_9615 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_H2QDL3_H2QDL3_PANTR_9598 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_F6TQY6_F6TQY6_MONDO_13616 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_I3MDE1_I3MDE1_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_H0XC02_H0XC02_OTOGA_30611 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A286XLX3_A0A286XLX3_CAVPO_10141 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and sp_Q13207_TBX2_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G3SYG4_G3SYG4_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G3WG33_G3WG33_SARHA_9305 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and sp_Q3SA48_TBX2_XENTR_8364 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_F7HXP4_F7HXP4_CALJA_9483 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_F8SIP4_F8SIP4_PIG_9823 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_G1LQG2_G1LQG2_AILME_9646 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_E1BLY0_E1BLY0_BOVIN_9913 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_M3WAL5_M3WAL5_FELCA_9685 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_U3JSE1_U3JSE1_FICAL_59894 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A151N6R3_A0A151N6R3_ALLMI_8496 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2I0LYP3_A0A2I0LYP3_COLLI_8932 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A093FYF0_A0A093FYF0_DRYPU_118200 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A1S3EYM0_A0A1S3EYM0_DIPOR_10020 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A3Q0H3P3_A0A3Q0H3P3_ALLSI_38654 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A1U7QXR2_A0A1U7QXR2_MESAU_10036 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A1V4K216_A0A1V4K216_PATFA_372326 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A218UUQ7_A0A218UUQ7_9PASE_299123 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A226PHM2_A0A226PHM2_COLVI_9014 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2R9AHR8_A0A2R9AHR8_PANPA_9597 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2U3VR80_A0A2U3VR80_ODORO_9708 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2Y9JWF8_A0A2Y9JWF8_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2Y9LMU1_A0A2Y9LMU1_DELLE_9749 are exactly identical!
WARNING: Sequences sp_Q60707_TBX2_MOUSE_10090 and tr_A0A2Y9SZP6_A0A2Y9SZP6_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_M3Y1V6_M3Y1V6_MUSPF_9669 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G1RQM8_G1RQM8_NOMLE_61853 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G1PI04_G1PI04_MYOLU_59463 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G3S9W2_G3S9W2_GORGO_9595 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_H2PJQ4_H2PJQ4_PONAB_9601 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G1KCC3_G1KCC3_ANOCA_28377 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G1SGN4_G1SGN4_RABIT_9986 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_E2R062_E2R062_CANLF_9615 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_H2QTC7_H2QTC7_PANTR_9598 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_F6PPW8_F6PPW8_MONDO_13616 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_F7B1K4_F7B1K4_HORSE_9796 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_I3NEM7_I3NEM7_ICTTR_43179 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and sp_O95935_TBX18_HUMAN_9606 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_F7CBI6_F7CBI6_MACMU_9544 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_K7G3Q5_K7G3Q5_PELSI_13735 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G3TEB0_G3TEB0_LOXAF_9785 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G3WB37_G3WB37_SARHA_9305 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_H0ZQI2_H0ZQI2_TAEGU_59729 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2R8MFR8_A0A2R8MFR8_CALJA_9483 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_F1S0I2_F1S0I2_PIG_9823 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_G1MBM3_G1MBM3_AILME_9646 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_L5JMX5_L5JMX5_PTEAL_9402 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_U3JJF4_U3JJF4_FICAL_59894 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A096NF47_A0A096NF47_PAPAN_9555 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A0D9RXR9_A0A0D9RXR9_CHLSB_60711 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A1U7S7Z7_A0A1U7S7Z7_ALLSI_38654 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A1V4JME8_A0A1V4JME8_PATFA_372326 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A218VBM2_A0A218VBM2_9PASE_299123 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2K5LXF7_A0A2K5LXF7_CERAT_9531 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2K6BJK6_A0A2K6BJK6_MACNE_9545 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2R9A1N2_A0A2R9A1N2_PANPA_9597 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2U3WH23_A0A2U3WH23_ODORO_9708 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2U3XDT3_A0A2U3XDT3_LEPWE_9713 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2Y9E2Y5_A0A2Y9E2Y5_TRIMA_127582 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2Y9MLN5_A0A2Y9MLN5_DELLE_9749 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A2Y9FEV5_A0A2Y9FEV5_PHYCD_9755 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A384BKP7_A0A384BKP7_URSMA_29073 are exactly identical!
WARNING: Sequences sp_Q9EPZ6_TBX18_MOUSE_10090 and tr_A0A384B8E9_A0A384B8E9_BALAS_310752 are exactly identical!
WARNING: Sequences tr_M3XY91_M3XY91_MUSPF_9669 and tr_F1Q320_F1Q320_CANLF_9615 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_G1QLX5_G1QLX5_NOMLE_61853 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_G1PSI6_G1PSI6_MYOLU_59463 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_G3I5G4_G3I5G4_CRIGR_10029 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_H2PMD8_H2PMD8_PONAB_9601 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_G1ST07_G1ST07_RABIT_9986 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_H2QUF0_H2QUF0_PANTR_9598 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_F6Q953_F6Q953_MONDO_13616 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A0G2KAH3_A0A0G2KAH3_RAT_10116 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A287CXS1_A0A287CXS1_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_H0X2G4_H0X2G4_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and sp_Q9UMR3_TBX20_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_F7E831_F7E831_MACMU_9544 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_G3TMI8_G3TMI8_LOXAF_9785 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_G3WV03_G3WV03_SARHA_9305 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_F7HNF6_F7HNF6_CALJA_9483 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_D2HA06_D2HA06_AILME_9646 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_G7P0F2_G7P0F2_MACFA_9541 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_M3WI10_M3WI10_FELCA_9685 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A096N256_A0A096N256_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A0D9RR04_A0A0D9RR04_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A1S2ZRI8_A0A1S2ZRI8_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A1U7TSS3_A0A1U7TSS3_TARSY_1868482 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A1U7QGM5_A0A1U7QGM5_MESAU_10036 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A2K5NJX0_A0A2K5NJX0_CERAT_9531 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A2K5XI87_A0A2K5XI87_MANLE_9568 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A2U3X3N1_A0A2U3X3N1_ODORO_9708 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A2U3XRT2_A0A2U3XRT2_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A2Y9E1E4_A0A2Y9E1E4_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_M3Y900_M3Y900_MUSPF_9669 and tr_A0A2Y9JDR6_A0A2Y9JDR6_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_E2REK1_E2REK1_CANLF_9615 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_F7DJB1_F7DJB1_HORSE_9796 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_W5QGR9_W5QGR9_SHEEP_9940 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_G1MDV6_G1MDV6_AILME_9646 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_L5K1R8_L5K1R8_PTEAL_9402 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A2I2V112_A0A2I2V112_FELCA_9685 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A1S3AK82_A0A1S3AK82_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A2U4BCE5_A0A2U4BCE5_TURTR_9739 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A2U3VY16_A0A2U3VY16_ODORO_9708 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A2U3XZ84_A0A2U3XZ84_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A2Y9L324_A0A2Y9L324_ENHLU_391180 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A2Y9PAP7_A0A2Y9PAP7_DELLE_9749 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A2Y9S6D3_A0A2Y9S6D3_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A384D122_A0A384D122_URSMA_29073 are exactly identical!
WARNING: Sequences tr_M3YC40_M3YC40_MUSPF_9669 and tr_A0A383ZZ69_A0A383ZZ69_BALAS_310752 are exactly identical!
WARNING: Sequences tr_M3YMD5_M3YMD5_MUSPF_9669 and tr_A0A287B554_A0A287B554_PIG_9823 are exactly identical!
WARNING: Sequences tr_M3YMD5_M3YMD5_MUSPF_9669 and tr_A0A2Y9LFN4_A0A2Y9LFN4_ENHLU_391180 are exactly identical!
WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B4I0Z1_B4I0Z1_DROSE_7238 are exactly identical!
WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B5DKZ7_B5DKZ7_DROPS_46245 are exactly identical!
WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B4NP80_B4NP80_DROWI_7260 are exactly identical!
WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_A0A0P8XS48_A0A0P8XS48_DROAN_7217 are exactly identical!
WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_A0A0Q9W8M4_A0A0Q9W8M4_DROVI_7244 are exactly identical!
WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_B4L5S0_B4L5S0_DROMO_7230 are exactly identical!
WARNING: Sequences sp_Q24432_OMB_DROME_7227 and tr_A0A1W4UPQ3_A0A1W4UPQ3_DROFC_30025 are exactly identical!
WARNING: Sequences tr_Q9VST2_Q9VST2_DROME_7227 and tr_B4HKK1_B4HKK1_DROSE_7238 are exactly identical!
WARNING: Sequences tr_Q9VST2_Q9VST2_DROME_7227 and tr_B3M5V5_B3M5V5_DROAN_7217 are exactly identical!
WARNING: Sequences tr_Q9VST2_Q9VST2_DROME_7227 and tr_A0A1W4VDK9_A0A1W4VDK9_DROFC_30025 are exactly identical!
WARNING: Sequences tr_A0A3B3H3D5_A0A3B3H3D5_ORYLA_8090 and tr_I3KF48_I3KF48_ORENI_8128 are exactly identical!
WARNING: Sequences tr_A0A3B3HTH8_A0A3B3HTH8_ORYLA_8090 and tr_A0A2I4CVW0_A0A2I4CVW0_9TELE_52670 are exactly identical!
WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_M3ZT55_M3ZT55_XIPMA_8083 are exactly identical!
WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_I3IUF2_I3IUF2_ORENI_8128 are exactly identical!
WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_H2UNP5_H2UNP5_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_H3CUF7_H3CUF7_TETNG_99883 are exactly identical!
WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_A0A096LXJ4_A0A096LXJ4_POEFO_48698 are exactly identical!
WARNING: Sequences tr_H2LSV8_H2LSV8_ORYLA_8090 and tr_A0A2I4D3I5_A0A2I4D3I5_9TELE_52670 are exactly identical!
WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_A0A3B5Q2X4_A0A3B5Q2X4_XIPMA_8083 are exactly identical!
WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_G3PK23_G3PK23_GASAC_69293 are exactly identical!
WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_A0A087YEN3_A0A087YEN3_POEFO_48698 are exactly identical!
WARNING: Sequences tr_H2MIQ8_H2MIQ8_ORYLA_8090 and tr_A0A2U9B3E0_A0A2U9B3E0_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_G7Q0W1_G7Q0W1_MACFA_9541 are exactly identical!
WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A096NHQ7_A0A096NHQ7_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A0D9R1I0_A0A0D9R1I0_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A2K5KIE3_A0A2K5KIE3_CERAT_9531 are exactly identical!
WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A2K6ECW9_A0A2K6ECW9_MACNE_9545 are exactly identical!
WARNING: Sequences tr_G1QND2_G1QND2_NOMLE_61853 and tr_A0A2K5YX76_A0A2K5YX76_MANLE_9568 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_G3QH03_G3QH03_GORGO_9595 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_H2NMX8_H2NMX8_PONAB_9601 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_H2Q985_H2Q985_PANTR_9598 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_H0XEI2_H0XEI2_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and sp_Q8IWI9_MGAP_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_F7INH6_F7INH6_CALJA_9483 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_G7PAZ1_G7PAZ1_MACFA_9541 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A2I3MUK3_A0A2I3MUK3_PAPAN_9555 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A0D9R653_A0A0D9R653_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A1U7T115_A0A1U7T115_TARSY_1868482 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A2K5MEZ9_A0A2K5MEZ9_CERAT_9531 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A2K6CEU6_A0A2K6CEU6_MACNE_9545 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A2K5YPG8_A0A2K5YPG8_MANLE_9568 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A2R9B6S2_A0A2R9B6S2_PANPA_9597 are exactly identical!
WARNING: Sequences tr_G1QUB1_G1QUB1_NOMLE_61853 and tr_A0A2Y9RH78_A0A2Y9RH78_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_G3IG61_G3IG61_CRIGR_10029 and tr_H0WVZ6_H0WVZ6_OTOGA_30611 are exactly identical!
WARNING: Sequences tr_G3IG61_G3IG61_CRIGR_10029 and tr_D2HZH8_D2HZH8_AILME_9646 are exactly identical!
WARNING: Sequences tr_G3IG61_G3IG61_CRIGR_10029 and tr_A0A1S3AGL6_A0A1S3AGL6_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_G3IG61_G3IG61_CRIGR_10029 and tr_A0A1U7R7P0_A0A1U7R7P0_MESAU_10036 are exactly identical!
WARNING: Sequences tr_A0A2K5TIZ6_A0A2K5TIZ6_GORGO_9595 and sp_A1YF56_TBX6_GORGO_9595 are exactly identical!
WARNING: Sequences tr_G3R1B5_G3R1B5_GORGO_9595 and tr_I3M4D8_I3M4D8_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_G3R1B5_G3R1B5_GORGO_9595 and sp_O43435_TBX1_HUMAN_9606 are exactly identical!
WARNING: Sequences tr_G3R1B5_G3R1B5_GORGO_9595 and tr_A0A1D5QWN2_A0A1D5QWN2_MACMU_9544 are exactly identical!
WARNING: Sequences tr_G3R1B5_G3R1B5_GORGO_9595 and tr_A0A2U3Z8E7_A0A2U3Z8E7_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_K7GD34_K7GD34_PELSI_13735 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_H0Z4P2_H0Z4P2_TAEGU_59729 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_A0A151P2D7_A0A151P2D7_ALLMI_8496 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_A0A0Q3MGG0_A0A0Q3MGG0_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_A0A1U7RIZ4_A0A1U7RIZ4_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_A0A218UZI5_A0A218UZI5_9PASE_299123 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_A0A226MV22_A0A226MV22_CALSU_9009 are exactly identical!
WARNING: Sequences tr_G1NHI6_G1NHI6_MELGA_9103 and tr_A0A226PUW7_A0A226PUW7_COLVI_9014 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_U3JR47_U3JR47_FICAL_59894 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_R0JGZ7_R0JGZ7_ANAPL_8839 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A0Q3PGL5_A0A0Q3PGL5_AMAAE_12930 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A087RH73_A0A087RH73_APTFO_9233 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A091FVX6_A0A091FVX6_9AVES_55661 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A2I0MLN2_A0A2I0MLN2_COLLI_8932 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A093IS77_A0A093IS77_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A091HQB5_A0A091HQB5_CALAN_9244 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A1V4JBA5_A0A1V4JBA5_PATFA_372326 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A218VD50_A0A218VD50_9PASE_299123 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A226NMG6_A0A226NMG6_CALSU_9009 are exactly identical!
WARNING: Sequences tr_G1NN54_G1NN54_MELGA_9103 and tr_A0A226P952_A0A226P952_COLVI_9014 are exactly identical!
WARNING: Sequences tr_G1SR52_G1SR52_RABIT_9986 and tr_I3LX46_I3LX46_ICTTR_43179 are exactly identical!
WARNING: Sequences tr_G1SR52_G1SR52_RABIT_9986 and tr_A0A091DRQ3_A0A091DRQ3_FUKDA_885580 are exactly identical!
WARNING: Sequences tr_Q29F60_Q29F60_DROPS_46245 and tr_B4HB12_B4HB12_DROPE_7234 are exactly identical!
WARNING: Sequences tr_Q29F61_Q29F61_DROPS_46245 and tr_B4HB13_B4HB13_DROPE_7234 are exactly identical!
WARNING: Sequences tr_Q29F62_Q29F62_DROPS_46245 and tr_B4HB14_B4HB14_DROPE_7234 are exactly identical!
WARNING: Sequences tr_H2QAW6_H2QAW6_PANTR_9598 and tr_A0A2R9A0X3_A0A2R9A0X3_PANPA_9597 are exactly identical!
WARNING: Sequences tr_F6S8U7_F6S8U7_ORNAN_9258 and tr_G3WH98_G3WH98_SARHA_9305 are exactly identical!
WARNING: Sequences tr_F7CIF3_F7CIF3_HORSE_9796 and tr_A0A2K6DT63_A0A2K6DT63_MACNE_9545 are exactly identical!
WARNING: Sequences tr_W5PUZ5_W5PUZ5_SHEEP_9940 and tr_D4A1V6_D4A1V6_RAT_10116 are exactly identical!
WARNING: Sequences tr_W5PUZ5_W5PUZ5_SHEEP_9940 and tr_E1BJT1_E1BJT1_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_A0A3B5PZB7_A0A3B5PZB7_XIPMA_8083 and tr_A0A096M0T3_A0A096M0T3_POEFO_48698 are exactly identical!
WARNING: Sequences tr_A0A3B5R1U4_A0A3B5R1U4_XIPMA_8083 and tr_A0A096M5V8_A0A096M5V8_POEFO_48698 are exactly identical!
WARNING: Sequences tr_M3ZR84_M3ZR84_XIPMA_8083 and tr_H2SMT0_H2SMT0_TAKRU_31033 are exactly identical!
WARNING: Sequences tr_M3ZR84_M3ZR84_XIPMA_8083 and tr_A0A087Y4D4_A0A087Y4D4_POEFO_48698 are exactly identical!
WARNING: Sequences tr_M3ZR84_M3ZR84_XIPMA_8083 and tr_A0A2I4CUU1_A0A2I4CUU1_9TELE_52670 are exactly identical!
WARNING: Sequences tr_M3ZR84_M3ZR84_XIPMA_8083 and tr_A0A2U9CGU1_A0A2U9CGU1_SCOMX_52904 are exactly identical!
WARNING: Sequences tr_M3ZT30_M3ZT30_XIPMA_8083 and tr_A0A087YPJ8_A0A087YPJ8_POEFO_48698 are exactly identical!
WARNING: Sequences tr_M3ZUW0_M3ZUW0_XIPMA_8083 and tr_A0A087YDH1_A0A087YDH1_POEFO_48698 are exactly identical!
WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A158NZS4_A0A158NZS4_ATTCE_12957 are exactly identical!
WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A151IXY8_A0A151IXY8_9HYME_471704 are exactly identical!
WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A195F3M1_A0A195F3M1_9HYME_34720 are exactly identical!
WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A195CM35_A0A195CM35_9HYME_456900 are exactly identical!
WARNING: Sequences tr_A0A088AE04_A0A088AE04_APIME_7460 and tr_A0A2A3EAU5_A0A2A3EAU5_APICC_94128 are exactly identical!
WARNING: Sequences tr_A0A287DG54_A0A287DG54_ICTTR_43179 and tr_A0A1S3ETF4_A0A1S3ETF4_DIPOR_10020 are exactly identical!
WARNING: Sequences tr_H2UNE2_H2UNE2_TAKRU_31033 and tr_H3CUF8_H3CUF8_TETNG_99883 are exactly identical!
WARNING: Sequences tr_H0VSV8_H0VSV8_CAVPO_10141 and tr_G5BZ14_G5BZ14_HETGA_10181 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0S2J6_A0A0V0S2J6_9BILA_6336 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1D342_A0A0V1D342_TRIBR_45882 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0WIN9_A0A0V0WIN9_9BILA_92179 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0VGY9_A0A0V0VGY9_9BILA_181606 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1L6A2_A0A0V1L6A2_9BILA_6335 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1A6P1_A0A0V1A6P1_9BILA_990121 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0YA78_A0A0V0YA78_TRIPS_6337 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1M7L7_A0A0V1M7L7_9BILA_268474 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1NSI6_A0A0V1NSI6_9BILA_92180 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V1H9W2_A0A0V1H9W2_9BILA_268475 are exactly identical!
WARNING: Sequences tr_E5RYU5_E5RYU5_TRISP_6334 and tr_A0A0V0TYX1_A0A0V0TYX1_9BILA_144512 are exactly identical!
WARNING: Sequences tr_Q7Q6E6_Q7Q6E6_ANOGA_7165 and tr_A0A084W2P8_A0A084W2P8_ANOSI_74873 are exactly identical!
WARNING: Sequences tr_K7EX20_K7EX20_PELSI_13735 and tr_K7F9V2_K7F9V2_PELSI_13735 are exactly identical!
WARNING: Sequences tr_K7GHK4_K7GHK4_PELSI_13735 and tr_W5MCK5_W5MCK5_LEPOC_7918 are exactly identical!
WARNING: Sequences tr_K7GHN8_K7GHN8_PELSI_13735 and tr_A0A2Y9DSS4_A0A2Y9DSS4_TRIMA_127582 are exactly identical!
WARNING: Sequences tr_H0ZIU9_H0ZIU9_TAEGU_59729 and tr_U3JXR9_U3JXR9_FICAL_59894 are exactly identical!
WARNING: Sequences tr_H0ZIU9_H0ZIU9_TAEGU_59729 and tr_A0A091EMT1_A0A091EMT1_CORBR_85066 are exactly identical!
WARNING: Sequences tr_H0ZIU9_H0ZIU9_TAEGU_59729 and tr_A0A091V0T8_A0A091V0T8_NIPNI_128390 are exactly identical!
WARNING: Sequences tr_H0ZIU9_H0ZIU9_TAEGU_59729 and tr_A0A087R3E9_A0A087R3E9_APTFO_9233 are exactly identical!
WARNING: Sequences tr_H0ZIU9_H0ZIU9_TAEGU_59729 and tr_A0A0A0B0X2_A0A0A0B0X2_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_H0ZKY7_H0ZKY7_TAEGU_59729 and tr_A0A218VA85_A0A218VA85_9PASE_299123 are exactly identical!
WARNING: Sequences tr_F4X2F0_F4X2F0_ACREC_103372 and tr_A0A195E2W4_A0A195E2W4_9HYME_471704 are exactly identical!
WARNING: Sequences tr_F6ULJ0_F6ULJ0_XENTR_8364 and tr_A0A1L8H810_A0A1L8H810_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F6ULJ0_F6ULJ0_XENTR_8364 and tr_A0A1L8HFV2_A0A1L8HFV2_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F6V9T9_F6V9T9_XENTR_8364 and tr_A0A1L8G9T9_A0A1L8G9T9_XENLA_8355 are exactly identical!
WARNING: Sequences tr_F7HQP5_F7HQP5_CALJA_9483 and tr_A0A0D9R0V2_A0A0D9R0V2_CHLSB_60711 are exactly identical!
WARNING: Sequences tr_F7HQP5_F7HQP5_CALJA_9483 and tr_A0A2I0LYN5_A0A2I0LYN5_COLLI_8932 are exactly identical!
WARNING: Sequences tr_F1SIK8_F1SIK8_PIG_9823 and tr_E1BGZ6_E1BGZ6_BOVIN_9913 are exactly identical!
WARNING: Sequences tr_F1SIK8_F1SIK8_PIG_9823 and tr_A0A2U3V2W3_A0A2U3V2W3_TURTR_9739 are exactly identical!
WARNING: Sequences tr_F1SIK8_F1SIK8_PIG_9823 and tr_A0A2Y9P1V7_A0A2Y9P1V7_DELLE_9749 are exactly identical!
WARNING: Sequences tr_F1SIK8_F1SIK8_PIG_9823 and tr_A0A2Y9FRV6_A0A2Y9FRV6_PHYCD_9755 are exactly identical!
WARNING: Sequences tr_F1SIK8_F1SIK8_PIG_9823 and tr_A0A384A4W5_A0A384A4W5_BALAS_310752 are exactly identical!
WARNING: Sequences tr_A8XZT8_A8XZT8_CAEBR_6238 and tr_A0A2G5UJ64_A0A2G5UJ64_9PELO_1611254 are exactly identical!
WARNING: Sequences tr_B3S6C1_B3S6C1_TRIAD_10228 and tr_A0A369SLS1_A0A369SLS1_9METZ_287889 are exactly identical!
WARNING: Sequences tr_B3S6C2_B3S6C2_TRIAD_10228 and tr_A0A369SLL9_A0A369SLL9_9METZ_287889 are exactly identical!
WARNING: Sequences sp_E1BEA8_TBX6_BOVIN_9913 and tr_A0A2U3VPZ5_A0A2U3VPZ5_ODORO_9708 are exactly identical!
WARNING: Sequences sp_E1BEA8_TBX6_BOVIN_9913 and tr_A0A2U3XRF6_A0A2U3XRF6_LEPWE_9713 are exactly identical!
WARNING: Sequences tr_A0A337S3K3_A0A337S3K3_FELCA_9685 and tr_A0A1S2ZXK7_A0A1S2ZXK7_ERIEU_9365 are exactly identical!
WARNING: Sequences tr_A0A3B1IUP9_A0A3B1IUP9_ASTMX_7994 and tr_W5UFJ3_W5UFJ3_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A3B1JY53_A0A3B1JY53_ASTMX_7994 and tr_A0A2D0QC04_A0A2D0QC04_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A3B1JY53_A0A3B1JY53_ASTMX_7994 and tr_A0A2D0QD34_A0A2D0QD34_ICTPU_7998 are exactly identical!
WARNING: Sequences tr_A0A0P7UHK7_A0A0P7UHK7_9TELE_113540 and tr_Q9IBC7_Q9IBC7_XENLA_8355 are exactly identical!
WARNING: Sequences tr_A0A0K0G2Z8_A0A0K0G2Z8_STRVS_75913 and tr_A0A0K0DZP2_A0A0K0DZP2_STRER_6248 are exactly identical!
WARNING: Sequences tr_A0A0K0G2Z8_A0A0K0G2Z8_STRVS_75913 and tr_A0A090LD63_A0A090LD63_STRRB_34506 are exactly identical!
WARNING: Sequences tr_A0A0K0G2Z8_A0A0K0G2Z8_STRVS_75913 and tr_A0A0N5CGR6_A0A0N5CGR6_STREA_174720 are exactly identical!
WARNING: Sequences tr_A0A151M3U9_A0A151M3U9_ALLMI_8496 and tr_A0A1U7RSR8_A0A1U7RSR8_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A151MV14_A0A151MV14_ALLMI_8496 and tr_A0A3Q0GMS6_A0A3Q0GMS6_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A151N4E0_A0A151N4E0_ALLMI_8496 and tr_A0A3Q0G6M4_A0A3Q0G6M4_ALLSI_38654 are exactly identical!
WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A091GAR1_A0A091GAR1_9AVES_55661 are exactly identical!
WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A0A0AN11_A0A0A0AN11_CHAVO_50402 are exactly identical!
WARNING: Sequences tr_A0A093PUT9_A0A093PUT9_9PASS_328815 and tr_A0A091I0I4_A0A091I0I4_CALAN_9244 are exactly identical!
WARNING: Sequences tr_A0A093I782_A0A093I782_STRCA_441894 and tr_A0A099Z9K8_A0A099Z9K8_TINGU_94827 are exactly identical!
WARNING: Sequences tr_A0A2I0LZ65_A0A2I0LZ65_COLLI_8932 and tr_A0A093G925_A0A093G925_DRYPU_118200 are exactly identical!
WARNING: Sequences tr_A0A2I0LZ65_A0A2I0LZ65_COLLI_8932 and tr_A0A1V4JRJ0_A0A1V4JRJ0_PATFA_372326 are exactly identical!
WARNING: Sequences tr_A0A0V0VBQ5_A0A0V0VBQ5_9BILA_181606 and tr_A0A0V0UEI4_A0A0V0UEI4_9BILA_144512 are exactly identical!
WARNING: Sequences tr_A0A1S3H0C4_A0A1S3H0C4_LINUN_7574 and tr_A0A1S3H0J1_A0A1S3H0J1_LINUN_7574 are exactly identical!
WARNING: Sequences tr_A0A1S3L083_A0A1S3L083_SALSA_8030 and tr_A0A1S3LJM5_A0A1S3LJM5_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3L083_A0A1S3L083_SALSA_8030 and tr_A0A060W6V2_A0A060W6V2_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3NS74_A0A1S3NS74_SALSA_8030 and tr_A0A1S3T011_A0A1S3T011_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3NS74_A0A1S3NS74_SALSA_8030 and tr_A0A060XMU9_A0A060XMU9_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3NS74_A0A1S3NS74_SALSA_8030 and tr_A0A060XX08_A0A060XX08_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3NTG3_A0A1S3NTG3_SALSA_8030 and tr_A0A1S3RX03_A0A1S3RX03_SALSA_8030 are exactly identical!
WARNING: Sequences tr_A0A1S3NTG3_A0A1S3NTG3_SALSA_8030 and tr_A0A060YLR5_A0A060YLR5_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3PPC6_A0A1S3PPC6_SALSA_8030 and tr_A0A060W004_A0A060W004_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A1S3RK27_A0A1S3RK27_SALSA_8030 and tr_A0A060WTP7_A0A060WTP7_ONCMY_8022 are exactly identical!
WARNING: Sequences tr_A0A2I4AK11_A0A2I4AK11_9TELE_52670 and tr_A0A2I4C5A1_A0A2I4C5A1_9TELE_52670 are exactly identical!
WARNING: Sequences tr_A0A226MMS2_A0A226MMS2_CALSU_9009 and tr_A0A226M804_A0A226M804_COLVI_9014 are exactly identical!
WARNING: Sequences tr_A0A226MMS2_A0A226MMS2_CALSU_9009 and tr_A0A226NS42_A0A226NS42_COLVI_9014 are exactly identical!
WARNING: Sequences tr_A0A226MQ93_A0A226MQ93_CALSU_9009 and tr_A0A226NPX4_A0A226NPX4_COLVI_9014 are exactly identical!
WARNING: Duplicate sequences found: 492

NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) 
NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.reduced.phy

Alignment comprises 1 partitions and 177 patterns

Partition 0: noname
Model: LG4X+R4
Alignment sites / patterns: 178 / 177
Gaps: 0.36 %
Invariant sites: 5.62 %


NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.rba

Parallelization scheme autoconfig: 4 worker(s) x 1 thread(s)

Parallel reduction/worker buffer size: 1 KB  / 0 KB

[00:00:00] Generating 20 random starting tree(s) with 1001 taxa
[00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 177 / 14160
[00:00:00] Data distribution: max. searches per worker: 5

Starting ML tree search with 20 distinct starting trees

[00:00:00 -206914.962396] Initial branch length optimization
[00:00:05 -173979.440630] Model parameter optimization (eps = 10.000000)
[00:00:44 -173275.303926] AUTODETECT spr round 1 (radius: 5)
[00:02:55 -84768.320366] AUTODETECT spr round 2 (radius: 10)
[00:05:12 -53562.820008] AUTODETECT spr round 3 (radius: 15)
[00:07:19 -41292.412372] AUTODETECT spr round 4 (radius: 20)
[00:09:53 -33973.044247] AUTODETECT spr round 5 (radius: 25)
[00:12:34 -31683.569603] SPR radius for FAST iterations: 25 (autodetect)
[00:12:34 -31683.569603] Model parameter optimization (eps = 3.000000)
[00:13:08 -31544.832926] FAST spr round 1 (radius: 25)
[00:15:08 -26002.955812] FAST spr round 2 (radius: 25)
[00:16:46 -25508.438374] FAST spr round 3 (radius: 25)
[00:18:17 -25490.085751] FAST spr round 4 (radius: 25)
[00:19:43 -25480.832711] FAST spr round 5 (radius: 25)
[00:21:06 -25480.404382] FAST spr round 6 (radius: 25)
[00:22:30 -25473.912859] FAST spr round 7 (radius: 25)
[00:23:52 -25473.911681] Model parameter optimization (eps = 1.000000)
[00:24:03 -25469.722690] SLOW spr round 1 (radius: 5)
[00:25:35 -25462.637846] SLOW spr round 2 (radius: 5)
[00:27:08 -25461.858242] SLOW spr round 3 (radius: 5)
[00:28:42 -25461.857437] SLOW spr round 4 (radius: 10)
[00:30:25 -25453.013858] SLOW spr round 5 (radius: 5)
[00:32:16 -25440.533109] SLOW spr round 6 (radius: 5)
[00:33:58 -25436.374249] SLOW spr round 7 (radius: 5)
[00:35:34 -25436.374128] SLOW spr round 8 (radius: 10)
[00:37:15 -25436.374008] SLOW spr round 9 (radius: 15)
[00:39:32 -25434.748597] SLOW spr round 10 (radius: 5)
[00:41:29 -25434.748439] SLOW spr round 11 (radius: 10)
[00:43:21 -25434.422225] SLOW spr round 12 (radius: 5)
[00:44:47] [worker #3] ML tree search #4, logLikelihood: -25421.052761
[00:45:08 -25434.422205] SLOW spr round 13 (radius: 10)
[00:46:54 -25434.422170] SLOW spr round 14 (radius: 15)
[00:48:58] [worker #1] ML tree search #2, logLikelihood: -25427.800100
[00:49:04 -25434.422167] SLOW spr round 15 (radius: 20)
[00:52:00 -25433.054913] SLOW spr round 16 (radius: 5)
[00:54:00 -25433.054898] SLOW spr round 17 (radius: 10)
[00:56:01 -25432.661861] SLOW spr round 18 (radius: 5)
[00:57:55 -25432.661194] SLOW spr round 19 (radius: 10)
[00:59:41 -25432.661165] SLOW spr round 20 (radius: 15)
[01:02:01 -25432.661128] SLOW spr round 21 (radius: 20)
[01:04:56 -25432.661125] SLOW spr round 22 (radius: 25)
[01:08:47 -25432.661125] Model parameter optimization (eps = 0.100000)

[01:08:55] [worker #0] ML tree search #1, logLikelihood: -25432.339308

[01:08:55 -204528.422436] Initial branch length optimization
[01:08:59 -171743.648595] Model parameter optimization (eps = 10.000000)
[01:09:51 -171058.697078] AUTODETECT spr round 1 (radius: 5)
[01:12:04 -88517.111503] AUTODETECT spr round 2 (radius: 10)
[01:14:11 -55541.292496] AUTODETECT spr round 3 (radius: 15)
[01:16:28 -42953.809055] AUTODETECT spr round 4 (radius: 20)
[01:19:10 -38235.729420] AUTODETECT spr round 5 (radius: 25)
[01:22:38 -34797.341485] SPR radius for FAST iterations: 25 (autodetect)
[01:22:38 -34797.341485] Model parameter optimization (eps = 3.000000)
[01:22:59 -34651.041351] FAST spr round 1 (radius: 25)
[01:25:05 -26353.879419] FAST spr round 2 (radius: 25)
[01:26:50 -25907.185215] FAST spr round 3 (radius: 25)
[01:28:25 -25877.955232] FAST spr round 4 (radius: 25)
[01:29:35] [worker #2] ML tree search #3, logLikelihood: -25432.764912
[01:29:54 -25876.873940] FAST spr round 5 (radius: 25)
[01:31:12] [worker #3] ML tree search #8, logLikelihood: -25703.612158
[01:31:20 -25876.872523] Model parameter optimization (eps = 1.000000)
[01:31:38 -25870.908878] SLOW spr round 1 (radius: 5)
[01:33:15 -25859.050399] SLOW spr round 2 (radius: 5)
[01:34:54 -25857.257977] SLOW spr round 3 (radius: 5)
[01:36:28 -25857.257198] SLOW spr round 4 (radius: 10)
[01:38:11 -25856.554357] SLOW spr round 5 (radius: 5)
[01:40:08 -25850.780195] SLOW spr round 6 (radius: 5)
[01:41:42] [worker #1] ML tree search #6, logLikelihood: -25421.800376
[01:41:50 -25850.779651] SLOW spr round 7 (radius: 10)
[01:43:34 -25850.779204] SLOW spr round 8 (radius: 15)
[01:45:55 -25850.099369] SLOW spr round 9 (radius: 5)
[01:47:56 -25850.098914] SLOW spr round 10 (radius: 10)
[01:49:52 -25841.682075] SLOW spr round 11 (radius: 5)
[01:51:45 -25841.671728] SLOW spr round 12 (radius: 10)
[01:53:34 -25841.671699] SLOW spr round 13 (radius: 15)
[01:55:49 -25840.338449] SLOW spr round 14 (radius: 5)
[01:57:48 -25840.338438] SLOW spr round 15 (radius: 10)
[01:59:43 -25840.338438] SLOW spr round 16 (radius: 15)
[02:01:57 -25840.338438] SLOW spr round 17 (radius: 20)
[02:04:44 -25840.200445] SLOW spr round 18 (radius: 5)
[02:06:48 -25840.200445] SLOW spr round 19 (radius: 10)
[02:08:47 -25840.200445] SLOW spr round 20 (radius: 15)
[02:11:02 -25840.200445] SLOW spr round 21 (radius: 20)
[02:13:49 -25840.200445] SLOW spr round 22 (radius: 25)
[02:17:13 -25838.923735] SLOW spr round 23 (radius: 5)
[02:19:23 -25837.321488] SLOW spr round 24 (radius: 5)
[02:21:20 -25837.161749] SLOW spr round 25 (radius: 5)
[02:23:02 -25837.161735] SLOW spr round 26 (radius: 10)
[02:24:45 -25837.161734] SLOW spr round 27 (radius: 15)
[02:26:37] [worker #2] ML tree search #7, logLikelihood: -25438.541999
[02:27:02 -25837.161733] SLOW spr round 28 (radius: 20)
[02:29:49 -25837.161733] SLOW spr round 29 (radius: 25)
[02:33:15 -25837.161733] Model parameter optimization (eps = 0.100000)

[02:33:26] [worker #0] ML tree search #5, logLikelihood: -25836.577825

[02:33:26 -206125.372676] Initial branch length optimization
[02:33:31 -172710.734657] Model parameter optimization (eps = 10.000000)
[02:34:05 -172017.571417] AUTODETECT spr round 1 (radius: 5)
[02:34:30] [worker #3] ML tree search #12, logLikelihood: -25443.000237
[02:36:15 -84657.658403] AUTODETECT spr round 2 (radius: 10)
[02:38:33 -58078.994306] AUTODETECT spr round 3 (radius: 15)
[02:40:48 -41296.238989] AUTODETECT spr round 4 (radius: 20)
[02:43:17 -32456.370067] AUTODETECT spr round 5 (radius: 25)
[02:46:16 -31156.421061] SPR radius for FAST iterations: 25 (autodetect)
[02:46:16 -31156.421061] Model parameter optimization (eps = 3.000000)
[02:46:36 -31022.310356] FAST spr round 1 (radius: 25)
[02:48:37 -25851.869236] FAST spr round 2 (radius: 25)
[02:50:18 -25444.767624] FAST spr round 3 (radius: 25)
[02:51:54 -25435.988636] FAST spr round 4 (radius: 25)
[02:53:22 -25435.988491] Model parameter optimization (eps = 1.000000)
[02:53:33 -25432.279456] SLOW spr round 1 (radius: 5)
[02:55:13 -25426.355142] SLOW spr round 2 (radius: 5)
[02:56:47 -25425.962901] SLOW spr round 3 (radius: 5)
[02:57:18] [worker #1] ML tree search #10, logLikelihood: -25460.307504
[02:58:22 -25425.962900] SLOW spr round 4 (radius: 10)
[03:00:10 -25424.933562] SLOW spr round 5 (radius: 5)
[03:02:07 -25422.408859] SLOW spr round 6 (radius: 5)
[03:03:49 -25422.408814] SLOW spr round 7 (radius: 10)
[03:05:35 -25422.408813] SLOW spr round 8 (radius: 15)
[03:07:55 -25421.856802] SLOW spr round 9 (radius: 5)
[03:09:58 -25421.431233] SLOW spr round 10 (radius: 5)
[03:11:49 -25421.363248] SLOW spr round 11 (radius: 10)
[03:13:34 -25421.060982] SLOW spr round 12 (radius: 5)
[03:15:26 -25420.039832] SLOW spr round 13 (radius: 5)
[03:17:07 -25420.039800] SLOW spr round 14 (radius: 10)
[03:18:50 -25420.039800] SLOW spr round 15 (radius: 15)
[03:21:12 -25419.201222] SLOW spr round 16 (radius: 5)
[03:23:11 -25419.201222] SLOW spr round 17 (radius: 10)
[03:25:09 -25418.883437] SLOW spr round 18 (radius: 5)
[03:27:06 -25418.883437] SLOW spr round 19 (radius: 10)
[03:29:06 -25418.883437] SLOW spr round 20 (radius: 15)
[03:31:37 -25418.883437] SLOW spr round 21 (radius: 20)
[03:34:56 -25418.883348] SLOW spr round 22 (radius: 25)
[03:39:08 -25418.883348] Model parameter optimization (eps = 0.100000)

[03:39:15] [worker #0] ML tree search #9, logLikelihood: -25418.721241

[03:39:16 -205695.696002] Initial branch length optimization
[03:39:20 -172138.181020] Model parameter optimization (eps = 10.000000)
[03:40:02 -171351.126439] AUTODETECT spr round 1 (radius: 5)
[03:42:11] [worker #2] ML tree search #11, logLikelihood: -25432.280641
[03:42:26 -85558.442649] AUTODETECT spr round 2 (radius: 10)
[03:43:03] [worker #3] ML tree search #16, logLikelihood: -25447.872611
[03:45:01 -53181.890344] AUTODETECT spr round 3 (radius: 15)
[03:47:31 -40181.959983] AUTODETECT spr round 4 (radius: 20)
[03:50:34 -32386.265196] AUTODETECT spr round 5 (radius: 25)
[03:53:34 -30942.094165] SPR radius for FAST iterations: 25 (autodetect)
[03:53:34 -30942.094165] Model parameter optimization (eps = 3.000000)
[03:53:58 -30810.137837] FAST spr round 1 (radius: 25)
[03:56:11 -25824.415693] FAST spr round 2 (radius: 25)
[03:56:53] [worker #1] ML tree search #14, logLikelihood: -25443.567128
[03:58:03 -25506.737095] FAST spr round 3 (radius: 25)
[03:59:45 -25496.717927] FAST spr round 4 (radius: 25)
[04:01:20 -25496.521993] FAST spr round 5 (radius: 25)
[04:02:53 -25496.521696] Model parameter optimization (eps = 1.000000)
[04:03:07 -25492.910171] SLOW spr round 1 (radius: 5)
[04:04:55 -25484.843785] SLOW spr round 2 (radius: 5)
[04:06:43 -25480.498652] SLOW spr round 3 (radius: 5)
[04:08:27 -25480.498187] SLOW spr round 4 (radius: 10)
[04:10:17 -25480.498173] SLOW spr round 5 (radius: 15)
[04:12:46 -25480.441883] SLOW spr round 6 (radius: 20)
[04:15:47 -25480.441883] SLOW spr round 7 (radius: 25)
[04:19:24 -25480.441883] Model parameter optimization (eps = 0.100000)

[04:19:30] [worker #0] ML tree search #13, logLikelihood: -25480.405124

[04:19:30 -204810.999500] Initial branch length optimization
[04:19:36 -171192.670114] Model parameter optimization (eps = 10.000000)
[04:20:13 -170693.702528] AUTODETECT spr round 1 (radius: 5)
[04:22:35 -85632.580051] AUTODETECT spr round 2 (radius: 10)
[04:24:58 -55683.655376] AUTODETECT spr round 3 (radius: 15)
[04:27:17 -47628.447224] AUTODETECT spr round 4 (radius: 20)
[04:30:17 -39215.630761] AUTODETECT spr round 5 (radius: 25)
[04:33:14 -36296.386263] SPR radius for FAST iterations: 25 (autodetect)
[04:33:14 -36296.386263] Model parameter optimization (eps = 3.000000)
[04:33:40 -36155.319901] FAST spr round 1 (radius: 25)
[04:36:08 -27049.222221] FAST spr round 2 (radius: 25)
[04:38:12 -25914.275200] FAST spr round 3 (radius: 25)
[04:38:27] [worker #2] ML tree search #15, logLikelihood: -25439.906969
[04:39:57 -25529.475003] FAST spr round 4 (radius: 25)
[04:41:37 -25515.172157] FAST spr round 5 (radius: 25)
[04:43:13 -25514.892251] FAST spr round 6 (radius: 25)
[04:44:48 -25514.891644] Model parameter optimization (eps = 1.000000)
[04:45:02 -25510.846935] SLOW spr round 1 (radius: 5)
[04:46:16] [worker #3] ML tree search #20, logLikelihood: -25420.777476
[04:46:52 -25505.706002] SLOW spr round 2 (radius: 5)
[04:48:41 -25494.204689] SLOW spr round 3 (radius: 5)
[04:49:12] [worker #1] ML tree search #18, logLikelihood: -29062.824323
[04:50:31 -25493.861902] SLOW spr round 4 (radius: 5)
[04:52:19 -25492.057841] SLOW spr round 5 (radius: 5)
[04:54:03 -25492.057446] SLOW spr round 6 (radius: 10)
[04:55:56 -25491.413347] SLOW spr round 7 (radius: 5)
[04:58:01 -25491.413024] SLOW spr round 8 (radius: 10)
[05:00:05 -25489.878458] SLOW spr round 9 (radius: 5)
[05:02:09 -25489.551503] SLOW spr round 10 (radius: 5)
[05:04:03 -25489.551421] SLOW spr round 11 (radius: 10)
[05:05:58 -25489.551419] SLOW spr round 12 (radius: 15)
[05:08:40 -25489.493183] SLOW spr round 13 (radius: 20)
[05:12:27 -25473.318901] SLOW spr round 14 (radius: 5)
[05:14:54 -25452.393827] SLOW spr round 15 (radius: 5)
[05:16:59 -25451.607633] SLOW spr round 16 (radius: 5)
[05:18:53 -25451.607562] SLOW spr round 17 (radius: 10)
[05:20:50 -25446.666899] SLOW spr round 18 (radius: 5)
[05:22:57 -25446.666601] SLOW spr round 19 (radius: 10)
[05:25:02 -25446.666599] SLOW spr round 20 (radius: 15)
[05:27:44 -25446.666599] SLOW spr round 21 (radius: 20)
[05:31:35 -25446.666599] SLOW spr round 22 (radius: 25)
[05:36:22 -25446.666599] Model parameter optimization (eps = 0.100000)

[05:36:34] [worker #0] ML tree search #17, logLikelihood: -25444.766098

[06:07:49] [worker #2] ML tree search #19, logLikelihood: -25431.482196

Optimized model parameters:

   Partition 0: noname
   Rate heterogeneity: FREE (4 cats, mean),  weights&rates: (0.240740,0.264506) (0.358046,0.678073) (0.278728,1.195676) (0.122486,2.941340) 
   Base frequencies (model): 
M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 
M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 
M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 
M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 
   Substitution rates (model): 
M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 
M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 
M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 
M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 


Final LogLikelihood: -25418.721241

AIC score: 54847.442482 / AICc score: 8098907.442482 / BIC score: 61226.918501
Free parameters (model + branch lengths): 2005

WARNING: Number of free parameters (K=2005) is larger than alignment size (n=178).
         This might lead to overfitting and compromise tree inference results!


Best ML tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.bestTree
All ML trees saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.mlTrees
Optimized model saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.bestModel

Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O95947/3_mltree/O95947.raxml.log

Analysis started: 30-Jun-2021 18:32:05 / finished: 01-Jul-2021 00:39:54

Elapsed time: 22069.382 seconds

Consumed energy: 1813.135 Wh (= 9 km in an electric car, or 45 km with an e-scooter!)