RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 02-Jun-2021 18:26:16 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/2_msa/O95500_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/3_mltree/O95500.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/4_raxmlng_ancestral/O95500 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1622647576 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/2_msa/O95500_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 239 sites WARNING: Sequences tr_M3XWH5_M3XWH5_MUSPF_9669 and tr_A0A2Y9JSD7_A0A2Y9JSD7_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3YR56_M3YR56_MUSPF_9669 and tr_A0A2Y9J4N3_A0A2Y9J4N3_ENHLU_391180 are exactly identical! WARNING: Sequences tr_M3Z413_M3Z413_MUSPF_9669 and tr_A0A2Y9L2Z4_A0A2Y9L2Z4_ENHLU_391180 are exactly identical! WARNING: Sequences tr_A0A2I3GE74_A0A2I3GE74_NOMLE_61853 and tr_A0A2J8VAU2_A0A2J8VAU2_PONAB_9601 are exactly identical! WARNING: Sequences tr_A0A2I3GE74_A0A2I3GE74_NOMLE_61853 and tr_A0A2J8K3N3_A0A2J8K3N3_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I3GE74_A0A2I3GE74_NOMLE_61853 and sp_P57739_CLD2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I3GE74_A0A2I3GE74_NOMLE_61853 and tr_A0A2R8Z7D8_A0A2R8Z7D8_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1R4T2_G1R4T2_NOMLE_61853 and tr_H2PCB8_H2PCB8_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1R4T2_G1R4T2_NOMLE_61853 and tr_F6TZW7_F6TZW7_MACMU_9544 are exactly identical! WARNING: Sequences tr_G1R4T2_G1R4T2_NOMLE_61853 and tr_G7NYP5_G7NYP5_MACFA_9541 are exactly identical! WARNING: Sequences tr_G1R4T2_G1R4T2_NOMLE_61853 and tr_A0A096N4M8_A0A096N4M8_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G1R4T2_G1R4T2_NOMLE_61853 and tr_A0A2K5MKD4_A0A2K5MKD4_CERAT_9531 are exactly identical! WARNING: Sequences tr_G1R4T2_G1R4T2_NOMLE_61853 and tr_A0A2K6CJM5_A0A2K6CJM5_MACNE_9545 are exactly identical! WARNING: Sequences tr_G1R4T2_G1R4T2_NOMLE_61853 and tr_A0A2K5ZGN3_A0A2K5ZGN3_MANLE_9568 are exactly identical! WARNING: Sequences tr_G1SAN1_G1SAN1_NOMLE_61853 and tr_A0A2I2ZD15_A0A2I2ZD15_GORGO_9595 are exactly identical! WARNING: Sequences tr_G1SAN1_G1SAN1_NOMLE_61853 and tr_A0A2J8XUV7_A0A2J8XUV7_PONAB_9601 are exactly identical! WARNING: Sequences tr_G1SAN1_G1SAN1_NOMLE_61853 and tr_H2QUQ3_H2QUQ3_PANTR_9598 are exactly identical! WARNING: Sequences tr_G1SAN1_G1SAN1_NOMLE_61853 and sp_O14493_CLD4_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G1SAN1_G1SAN1_NOMLE_61853 and tr_A0A2R8ZUG6_A0A2R8ZUG6_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3QSH9_G3QSH9_GORGO_9595 and sp_Q8N6F1_CLD19_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3QSH9_G3QSH9_GORGO_9595 and tr_A0A096N8Z0_A0A096N8Z0_PAPAN_9555 are exactly identical! WARNING: Sequences tr_G3QSH9_G3QSH9_GORGO_9595 and tr_A0A2K5KV37_A0A2K5KV37_CERAT_9531 are exactly identical! WARNING: Sequences tr_G3QSH9_G3QSH9_GORGO_9595 and tr_A0A2K6CFT9_A0A2K6CFT9_MACNE_9545 are exactly identical! WARNING: Sequences tr_G3QSH9_G3QSH9_GORGO_9595 and tr_A0A2K6AK46_A0A2K6AK46_MANLE_9568 are exactly identical! WARNING: Sequences tr_G3QSH9_G3QSH9_GORGO_9595 and tr_A0A2R9BYC0_A0A2R9BYC0_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RDP5_G3RDP5_GORGO_9595 and tr_H2QNY7_H2QNY7_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RDP5_G3RDP5_GORGO_9595 and sp_O95832_CLD1_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3RDP5_G3RDP5_GORGO_9595 and tr_A0A2R9B835_A0A2R9B835_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3RFZ9_G3RFZ9_GORGO_9595 and tr_A0A2J8M7Q2_A0A2J8M7Q2_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3RFZ9_G3RFZ9_GORGO_9595 and sp_O95500_CLD14_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3S2W1_G3S2W1_GORGO_9595 and tr_H2R590_H2R590_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3S2W1_G3S2W1_GORGO_9595 and sp_O15551_CLD3_HUMAN_9606 are exactly identical! WARNING: Sequences tr_G3S2W1_G3S2W1_GORGO_9595 and tr_A0A2R8ZHZ2_A0A2R8ZHZ2_PANPA_9597 are exactly identical! WARNING: Sequences tr_G3SJL4_G3SJL4_GORGO_9595 and tr_H2NSI1_H2NSI1_PONAB_9601 are exactly identical! WARNING: Sequences tr_G3SJL4_G3SJL4_GORGO_9595 and tr_H2QC28_H2QC28_PANTR_9598 are exactly identical! WARNING: Sequences tr_G3SJL4_G3SJL4_GORGO_9595 and tr_A0A2R9B348_A0A2R9B348_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QKX0_H2QKX0_PANTR_9598 and tr_A0A2R9API0_A0A2R9API0_PANPA_9597 are exactly identical! WARNING: Sequences tr_H2QTY2_H2QTY2_PANTR_9598 and sp_P56880_CLD20_HUMAN_9606 are exactly identical! WARNING: Sequences tr_H2QTY2_H2QTY2_PANTR_9598 and tr_A0A2R8ZI08_A0A2R8ZI08_PANPA_9597 are exactly identical! WARNING: Sequences tr_M3ZK56_M3ZK56_XIPMA_8083 and tr_A0A096LX29_A0A096LX29_POEFO_48698 are exactly identical! WARNING: Sequences tr_M4AYF9_M4AYF9_XIPMA_8083 and tr_A0A087YS24_A0A087YS24_POEFO_48698 are exactly identical! WARNING: Sequences tr_Q6E5T6_Q6E5T6_TAKRU_31033 and tr_H3C036_H3C036_TETNG_99883 are exactly identical! WARNING: Sequences sp_O00501_CLD5_HUMAN_9606 and tr_A0A2R9C0D5_A0A2R9C0D5_PANPA_9597 are exactly identical! WARNING: Sequences sp_P56750_CLD17_HUMAN_9606 and tr_A0A2R9AVC4_A0A2R9AVC4_PANPA_9597 are exactly identical! WARNING: Sequences tr_F6RQF6_F6RQF6_MACMU_9544 and tr_A0A096ML45_A0A096ML45_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6RQF6_F6RQF6_MACMU_9544 and tr_A0A2K6CZG0_A0A2K6CZG0_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6RQF6_F6RQF6_MACMU_9544 and tr_A0A2K5XJX4_A0A2K5XJX4_MANLE_9568 are exactly identical! WARNING: Sequences tr_F6UF88_F6UF88_MACMU_9544 and tr_G7P1L6_G7P1L6_MACFA_9541 are exactly identical! WARNING: Sequences tr_F6UF88_F6UF88_MACMU_9544 and tr_A0A2K6AN12_A0A2K6AN12_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6VLP4_F6VLP4_MACMU_9544 and tr_A0A2K6CV27_A0A2K6CV27_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6YR27_F6YR27_MACMU_9544 and tr_A0A096MKU9_A0A096MKU9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_F6YR27_F6YR27_MACMU_9544 and tr_A0A2K5KY80_A0A2K5KY80_CERAT_9531 are exactly identical! WARNING: Sequences tr_F6YR27_F6YR27_MACMU_9544 and tr_A0A2K6CYJ4_A0A2K6CYJ4_MACNE_9545 are exactly identical! WARNING: Sequences tr_F6YR27_F6YR27_MACMU_9544 and tr_A0A2K5XI05_A0A2K5XI05_MANLE_9568 are exactly identical! WARNING: Sequences tr_F7AWZ8_F7AWZ8_MACMU_9544 and tr_G7Q0A9_G7Q0A9_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7AWZ8_F7AWZ8_MACMU_9544 and tr_A0A0D9SBX4_A0A0D9SBX4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7AWZ8_F7AWZ8_MACMU_9544 and tr_A0A2K5KH52_A0A2K5KH52_CERAT_9531 are exactly identical! WARNING: Sequences tr_F7AWZ8_F7AWZ8_MACMU_9544 and tr_A0A2K6AVA3_A0A2K6AVA3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7CZU1_F7CZU1_MACMU_9544 and tr_A0A0D9RHI5_A0A0D9RHI5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7CZU1_F7CZU1_MACMU_9544 and tr_A0A2K6DQN3_A0A2K6DQN3_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7DI06_F7DI06_MACMU_9544 and tr_G7P110_G7P110_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7DSA3_F7DSA3_MACMU_9544 and tr_G7Q0B0_G7Q0B0_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7DSA3_F7DSA3_MACMU_9544 and tr_A0A0D9SBX5_A0A0D9SBX5_CHLSB_60711 are exactly identical! WARNING: Sequences tr_D2H059_D2H059_AILME_9646 and tr_A0A384D8I6_A0A384D8I6_URSMA_29073 are exactly identical! WARNING: Sequences tr_G7Q3E1_G7Q3E1_MACFA_9541 and tr_A0A2K6AMB6_A0A2K6AMB6_MACNE_9545 are exactly identical! WARNING: Sequences tr_G7Q3E1_G7Q3E1_MACFA_9541 and tr_A0A2K5XEM8_A0A2K5XEM8_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A0D9SBJ4_A0A0D9SBJ4_CHLSB_60711 and tr_A0A2K6BGD0_A0A2K6BGD0_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A151MM51_A0A151MM51_ALLMI_8496 and tr_A0A1U7RW01_A0A1U7RW01_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151NTM2_A0A151NTM2_ALLMI_8496 and tr_A0A1U7SDN9_A0A1U7SDN9_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A151PDY9_A0A151PDY9_ALLMI_8496 and tr_A0A3Q0FUA6_A0A3Q0FUA6_ALLSI_38654 are exactly identical! WARNING: Sequences tr_A0A1S3L2H0_A0A1S3L2H0_SALSA_8030 and tr_A0A060YEX4_A0A060YEX4_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3M3A4_A0A1S3M3A4_SALSA_8030 and tr_A0A060XR36_A0A060XR36_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A1S3MXV0_A0A1S3MXV0_SALSA_8030 and tr_A0A060YHC1_A0A060YHC1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_B1H3N0_B1H3N0_SALSA_8030 and tr_F9W2Z1_F9W2Z1_ONCMY_8022 are exactly identical! WARNING: Sequences tr_A0A226MHL8_A0A226MHL8_CALSU_9009 and tr_A0A226NVS0_A0A226NVS0_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226MHZ3_A0A226MHZ3_CALSU_9009 and tr_A0A226NWS0_A0A226NWS0_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A226N5Y6_A0A226N5Y6_CALSU_9009 and tr_A0A226P872_A0A226P872_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2K5MAG4_A0A2K5MAG4_CERAT_9531 and tr_A0A2K5Y569_A0A2K5Y569_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2K6ANB8_A0A2K6ANB8_MACNE_9545 and tr_A0A2K5XY02_A0A2K5XY02_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2U3X5R8_A0A2U3X5R8_ODORO_9708 and tr_A0A2U3Z8Q2_A0A2U3Z8Q2_LEPWE_9713 are exactly identical! WARNING: Sequences tr_A0A2Y9LBV6_A0A2Y9LBV6_DELLE_9749 and tr_A0A2Y9FBG5_A0A2Y9FBG5_PHYCD_9755 are exactly identical! WARNING: Sequences tr_A0A2Y9LBV6_A0A2Y9LBV6_DELLE_9749 and tr_A0A384B9W5_A0A384B9W5_BALAS_310752 are exactly identical! WARNING: Sequences tr_A0A2Y9MJC7_A0A2Y9MJC7_DELLE_9749 and tr_A0A383ZTD8_A0A383ZTD8_BALAS_310752 are exactly identical! WARNING: Duplicate sequences found: 83 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/4_raxmlng_ancestral/O95500.raxml.reduced.phy Alignment comprises 1 partitions and 239 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 239 Gaps: 12.74 % Invariant sites: 2.09 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/4_raxmlng_ancestral/O95500.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/3_mltree/O95500.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 60 / 4800 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -80465.509162 [00:00:00 -80465.509162] Initial branch length optimization [00:00:00 -80108.219475] Model parameter optimization (eps = 0.100000) [00:00:36] Tree #1, final logLikelihood: -79796.556118 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.205772,0.396101) (0.351903,0.750791) (0.224466,0.788533) (0.217859,2.190819) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/4_raxmlng_ancestral/O95500.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/4_raxmlng_ancestral/O95500.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/4_raxmlng_ancestral/O95500.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/020621_run/phylogeny-snakemake/results/O95500/4_raxmlng_ancestral/O95500.raxml.log Analysis started: 02-Jun-2021 18:26:16 / finished: 02-Jun-2021 18:26:54 Elapsed time: 38.324 seconds Consumed energy: 3.330 Wh