RAxML-NG v. 1.0.2 released on 22.02.2021 by The Exelixis Lab. Developed by: Alexey M. Kozlov and Alexandros Stamatakis. Contributors: Diego Darriba, Tomas Flouri, Benoit Morel, Sarah Lutteropp, Ben Bettisworth. Latest version: https://github.com/amkozlov/raxml-ng Questions/problems/suggestions? Please visit: https://groups.google.com/forum/#!forum/raxml System: Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz, 40 cores, 376 GB RAM RAxML-NG was called at 12-Jul-2021 17:31:19 as follows: raxml-ng --ancestral --msa /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/2_msa/O75190_nogap_msa.fasta --tree /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/3_mltree/O75190.raxml.bestTree_unrooted --model LG4X --prefix /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/4_raxmlng_ancestral/O75190 --threads 4 Analysis options: run mode: Ancestral state reconstruction start tree(s): user random seed: 1626100279 tip-inner: ON pattern compression: OFF per-rate scalers: OFF site repeats: OFF branch lengths: proportional (ML estimate, algorithm: NR-FAST) SIMD kernels: AVX2 parallelization: coarse-grained (auto), PTHREADS (4 threads), thread pinning: OFF [00:00:00] Reading alignment from file: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/2_msa/O75190_nogap_msa.fasta [00:00:00] Loaded alignment with 1001 taxa and 326 sites WARNING: Sequences tr_A0A2I2YRC6_A0A2I2YRC6_GORGO_9595 and tr_A0A2I3RJP8_A0A2I3RJP8_PANTR_9598 are exactly identical! WARNING: Sequences tr_A0A2I2YRC6_A0A2I2YRC6_GORGO_9595 and sp_P25686_DNJB2_HUMAN_9606 are exactly identical! WARNING: Sequences tr_A0A2I2YRC6_A0A2I2YRC6_GORGO_9595 and tr_A0A096NUA9_A0A096NUA9_PAPAN_9555 are exactly identical! WARNING: Sequences tr_A0A2I2YRC6_A0A2I2YRC6_GORGO_9595 and tr_A0A2K6D538_A0A2K6D538_MACNE_9545 are exactly identical! WARNING: Sequences tr_A0A2I2YRC6_A0A2I2YRC6_GORGO_9595 and tr_A0A2K5XLE4_A0A2K5XLE4_MANLE_9568 are exactly identical! WARNING: Sequences tr_A0A2I2YRC6_A0A2I2YRC6_GORGO_9595 and tr_A0A2R9ADJ4_A0A2R9ADJ4_PANPA_9597 are exactly identical! WARNING: Sequences tr_G1NAX8_G1NAX8_MELGA_9103 and tr_A0A226NHB5_A0A226NHB5_CALSU_9009 are exactly identical! WARNING: Sequences tr_G1NAX8_G1NAX8_MELGA_9103 and tr_A0A226PKU6_A0A226PKU6_COLVI_9014 are exactly identical! WARNING: Sequences tr_A0A2J8KAN0_A0A2J8KAN0_PANTR_9598 and tr_A0A2R8Z9J2_A0A2R8Z9J2_PANPA_9597 are exactly identical! WARNING: Sequences tr_M4AF82_M4AF82_XIPMA_8083 and tr_A0A087X9N1_A0A087X9N1_POEFO_48698 are exactly identical! WARNING: Sequences tr_K4BNI8_K4BNI8_SOLLC_4081 and tr_M0ZT02_M0ZT02_SOLTU_4113 are exactly identical! WARNING: Sequences tr_K4CQ25_K4CQ25_SOLLC_4081 and tr_M1C475_M1C475_SOLTU_4113 are exactly identical! WARNING: Sequences tr_A0A158NVG5_A0A158NVG5_ATTCE_12957 and tr_A0A151I5N9_A0A151I5N9_9HYME_520822 are exactly identical! WARNING: Sequences tr_A0A0E0FJA2_A0A0E0FJA2_ORYNI_4536 and tr_A2WMM2_A2WMM2_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0HIE7_A0A0E0HIE7_ORYNI_4536 and tr_A2Y7F9_A2Y7F9_ORYSI_39946 are exactly identical! WARNING: Sequences tr_A0A0E0HIE7_A0A0E0HIE7_ORYNI_4536 and tr_I1PXX3_I1PXX3_ORYGL_4538 are exactly identical! WARNING: Sequences tr_A0A0E0HIE7_A0A0E0HIE7_ORYNI_4536 and tr_A0A0E0PR78_A0A0E0PR78_ORYRU_4529 are exactly identical! WARNING: Sequences tr_A0A0E0HIE7_A0A0E0HIE7_ORYNI_4536 and tr_A0A0D3GAS7_A0A0D3GAS7_9ORYZ_65489 are exactly identical! WARNING: Sequences tr_A0A0E0HIE7_A0A0E0HIE7_ORYNI_4536 and tr_A0A0E0A2S3_A0A0E0A2S3_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0HIE7_A0A0E0HIE7_ORYNI_4536 and tr_Q688X8_Q688X8_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_F7FCL8_F7FCL8_MACMU_9544 and tr_Q4R6T6_Q4R6T6_MACFA_9541 are exactly identical! WARNING: Sequences tr_F7FCL8_F7FCL8_MACMU_9544 and tr_A0A0D9SBU4_A0A0D9SBU4_CHLSB_60711 are exactly identical! WARNING: Sequences tr_F7FCL8_F7FCL8_MACMU_9544 and tr_A0A2K6ATS6_A0A2K6ATS6_MACNE_9545 are exactly identical! WARNING: Sequences tr_F7FCL8_F7FCL8_MACMU_9544 and tr_A0A2K5XJ97_A0A2K5XJ97_MANLE_9568 are exactly identical! WARNING: Sequences tr_H0Z8X4_H0Z8X4_TAEGU_59729 and tr_U3JTB3_U3JTB3_FICAL_59894 are exactly identical! WARNING: Sequences tr_H0Z8X4_H0Z8X4_TAEGU_59729 and tr_A0A091F6Z0_A0A091F6Z0_CORBR_85066 are exactly identical! WARNING: Sequences tr_H0Z8X4_H0Z8X4_TAEGU_59729 and tr_A0A093Q8E3_A0A093Q8E3_9PASS_328815 are exactly identical! WARNING: Sequences tr_H0Z8X4_H0Z8X4_TAEGU_59729 and tr_A0A218VF99_A0A218VF99_9PASE_299123 are exactly identical! WARNING: Sequences tr_A0A0E0MTQ5_A0A0E0MTQ5_ORYRU_4529 and tr_A0A0D9Y5V9_A0A0D9Y5V9_9ORYZ_40148 are exactly identical! WARNING: Sequences tr_A0A0E0MTQ5_A0A0E0MTQ5_ORYRU_4529 and tr_Q9FTT4_Q9FTT4_ORYSJ_39947 are exactly identical! WARNING: Sequences tr_E3LZ50_E3LZ50_CAERE_31234 and tr_A0A261BQL1_A0A261BQL1_9PELO_1503980 are exactly identical! WARNING: Sequences tr_G1MEB5_G1MEB5_AILME_9646 and tr_A0A384C1E3_A0A384C1E3_URSMA_29073 are exactly identical! WARNING: Sequences tr_B3RQK7_B3RQK7_TRIAD_10228 and tr_A0A369S6Q7_A0A369S6Q7_9METZ_287889 are exactly identical! WARNING: Sequences tr_M4CAV8_M4CAV8_BRARP_51351 and tr_A0A078JQX0_A0A078JQX0_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4DVG1_M4DVG1_BRARP_51351 and tr_A0A078IXK9_A0A078IXK9_BRANA_3708 are exactly identical! WARNING: Sequences tr_M4DVG1_M4DVG1_BRARP_51351 and tr_A0A0D3AXM6_A0A0D3AXM6_BRAOL_109376 are exactly identical! WARNING: Sequences tr_M4ELR0_M4ELR0_BRARP_51351 and tr_A0A078JEQ8_A0A078JEQ8_BRANA_3708 are exactly identical! WARNING: Sequences tr_U3IE39_U3IE39_ANAPL_8839 and tr_A0A087RHF4_A0A087RHF4_APTFO_9233 are exactly identical! WARNING: Sequences tr_U3IE39_U3IE39_ANAPL_8839 and tr_A0A2I0ME77_A0A2I0ME77_COLLI_8932 are exactly identical! WARNING: Sequences tr_U3IE39_U3IE39_ANAPL_8839 and tr_A0A093GNX9_A0A093GNX9_DRYPU_118200 are exactly identical! WARNING: Sequences tr_U3IE39_U3IE39_ANAPL_8839 and tr_A0A091IFT6_A0A091IFT6_CALAN_9244 are exactly identical! WARNING: Sequences tr_U3IE39_U3IE39_ANAPL_8839 and tr_A0A1V4JZA3_A0A1V4JZA3_PATFA_372326 are exactly identical! WARNING: Sequences tr_W2QTZ8_W2QTZ8_PHYPN_761204 and tr_A0A0W8DZ23_A0A0W8DZ23_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2QTZ8_W2QTZ8_PHYPN_761204 and tr_W2K3Y9_W2K3Y9_PHYPR_4792 are exactly identical! WARNING: Sequences tr_W2R026_W2R026_PHYPN_761204 and tr_A0A0W8BWU1_A0A0W8BWU1_PHYNI_4790 are exactly identical! WARNING: Sequences tr_W2R026_W2R026_PHYPN_761204 and tr_W2K737_W2K737_PHYPR_4792 are exactly identical! WARNING: Sequences tr_A0A015KYY2_A0A015KYY2_9GLOM_1432141 and tr_A0A2H5R462_A0A2H5R462_RHIID_747089 are exactly identical! WARNING: Sequences tr_A0A067GLT6_A0A067GLT6_CITSI_2711 and tr_V4UCP7_V4UCP7_9ROSI_85681 are exactly identical! WARNING: Sequences tr_A0A078JI59_A0A078JI59_BRANA_3708 and tr_A0A0D3DWD2_A0A0D3DWD2_BRAOL_109376 are exactly identical! WARNING: Sequences tr_A0A0D9R6W7_A0A0D9R6W7_CHLSB_60711 and tr_A0A2K5P8B0_A0A2K5P8B0_CERAT_9531 are exactly identical! WARNING: Sequences tr_V4SPQ8_V4SPQ8_9ROSI_85681 and tr_A0A2H5QK75_A0A2H5QK75_CITUN_55188 are exactly identical! WARNING: Sequences tr_A0A0D2R2H7_A0A0D2R2H7_GOSRA_29730 and tr_A0A1U8IXL5_A0A1U8IXL5_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0D2TR88_A0A0D2TR88_GOSRA_29730 and tr_A0A1U8KL17_A0A1U8KL17_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A0L9V5A6_A0A0L9V5A6_PHAAN_3914 and tr_A0A1S3VLV7_A0A1S3VLV7_VIGRR_3916 are exactly identical! WARNING: Sequences tr_A0A093JK64_A0A093JK64_STRCA_441894 and tr_A0A0A0AGM0_A0A0A0AGM0_CHAVO_50402 are exactly identical! WARNING: Sequences tr_A0A0V1CHR1_A0A0V1CHR1_TRIBR_45882 and tr_A0A0V0WQS9_A0A0V0WQS9_9BILA_92179 are exactly identical! WARNING: Sequences tr_A0A0V1CHR1_A0A0V1CHR1_TRIBR_45882 and tr_A0A0V0USG9_A0A0V0USG9_9BILA_181606 are exactly identical! WARNING: Sequences tr_A0A0V1CHR1_A0A0V1CHR1_TRIBR_45882 and tr_A0A0V1KX25_A0A0V1KX25_9BILA_6335 are exactly identical! WARNING: Sequences tr_A0A0V1CHR1_A0A0V1CHR1_TRIBR_45882 and tr_A0A0V0ZWQ7_A0A0V0ZWQ7_9BILA_990121 are exactly identical! WARNING: Sequences tr_A0A0V1CHR1_A0A0V1CHR1_TRIBR_45882 and tr_A0A0V1NXZ5_A0A0V1NXZ5_9BILA_92180 are exactly identical! WARNING: Sequences tr_A0A0V1CHR1_A0A0V1CHR1_TRIBR_45882 and tr_A0A0V0TM43_A0A0V0TM43_9BILA_144512 are exactly identical! WARNING: Sequences tr_A0A0V0XP67_A0A0V0XP67_TRIPS_6337 and tr_A0A0V1MDU4_A0A0V1MDU4_9BILA_268474 are exactly identical! WARNING: Sequences tr_A0A0V0XP67_A0A0V0XP67_TRIPS_6337 and tr_A0A0V1H127_A0A0V1H127_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A0V1MJ98_A0A0V1MJ98_9BILA_268474 and tr_A0A0V1IBJ5_A0A0V1IBJ5_9BILA_268475 are exactly identical! WARNING: Sequences tr_A0A1S3Z024_A0A1S3Z024_TOBAC_4097 and tr_A0A1U7WVV8_A0A1U7WVV8_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S4BNL2_A0A1S4BNL2_TOBAC_4097 and tr_A0A1U7WAB8_A0A1U7WAB8_NICSY_4096 are exactly identical! WARNING: Sequences tr_Q9SP09_Q9SP09_TOBAC_4097 and tr_A0A1U7W9C6_A0A1U7W9C6_NICSY_4096 are exactly identical! WARNING: Sequences tr_A0A1S3P0J2_A0A1S3P0J2_SALSA_8030 and tr_A0A1S3P0W6_A0A1S3P0W6_SALSA_8030 are exactly identical! WARNING: Sequences tr_A0A1U8I0W8_A0A1U8I0W8_GOSHI_3635 and tr_A0A1U8PDE0_A0A1U8PDE0_GOSHI_3635 are exactly identical! WARNING: Sequences tr_A0A1U8DSI1_A0A1U8DSI1_CAPAN_4072 and tr_A0A2G3BSK9_A0A2G3BSK9_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A1U8EVX7_A0A1U8EVX7_CAPAN_4072 and tr_A0A2G3B895_A0A2G3B895_CAPCH_80379 are exactly identical! WARNING: Sequences tr_A0A2U3V8R8_A0A2U3V8R8_TURTR_9739 and tr_A0A2Y9MMG1_A0A2Y9MMG1_DELLE_9749 are exactly identical! WARNING: Duplicate sequences found: 72 NOTE: Reduced alignment (with duplicates and gap-only sites/taxa removed) NOTE: was saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/4_raxmlng_ancestral/O75190.raxml.reduced.phy Alignment comprises 1 partitions and 326 sites Partition 0: noname Model: LG4X+R4 Alignment sites: 326 Gaps: 32.84 % Invariant sites: 0.00 % NOTE: Binary MSA file created: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/4_raxmlng_ancestral/O75190.raxml.rba Parallelization scheme autoconfig: 1 worker(s) x 4 thread(s) Parallel reduction/worker buffer size: 1 KB / 0 KB [00:00:00] Loading user starting tree(s) from: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/3_mltree/O75190.raxml.bestTree_unrooted [00:00:00] Data distribution: max. partitions/sites/weight per thread: 1 / 82 / 6560 [00:00:00] Data distribution: max. searches per worker: 1 Starting ML tree search with 1 distinct starting trees [00:00:00] Tree #1, initial LogLikelihood: -138788.416913 [00:00:00 -138788.416913] Initial branch length optimization [00:00:01 -114602.965117] Model parameter optimization (eps = 0.100000) [00:00:26] Tree #1, final logLikelihood: -114436.044055 Optimized model parameters: Partition 0: noname Rate heterogeneity: FREE (4 cats, mean), weights&rates: (0.074834,0.175632) (0.083779,0.304579) (0.359694,0.678000) (0.481694,1.489467) Base frequencies (model): M0: 0.147383 0.017579 0.058208 0.017707 0.026331 0.041582 0.017494 0.027859 0.011849 0.076971 0.147823 0.019535 0.037132 0.029940 0.008059 0.088179 0.089653 0.006477 0.032308 0.097931 M1: 0.063139 0.066357 0.011586 0.066571 0.010800 0.009276 0.053984 0.146986 0.034214 0.088822 0.098196 0.032390 0.021263 0.072697 0.016761 0.020711 0.020797 0.025463 0.045615 0.094372 M2: 0.062457 0.066826 0.049332 0.065270 0.006513 0.041231 0.058965 0.080852 0.028024 0.037024 0.075925 0.064131 0.019620 0.028710 0.104579 0.056388 0.062027 0.008241 0.033124 0.050760 M3: 0.106471 0.074171 0.044513 0.096390 0.002148 0.066733 0.158908 0.037625 0.020691 0.014608 0.028797 0.105352 0.007864 0.007477 0.083595 0.055726 0.047711 0.003975 0.010088 0.027159 Substitution rates (model): M 0: 0.295719 0.067388 0.253712 1.029289 0.107964 0.514644 10.868848 0.380498 0.084223 0.086976 0.188789 0.286389 0.155567 1.671061 2.132922 0.529591 0.115551 0.102453 0.916683 0.448317 0.457483 0.576016 1.741924 0.736017 0.704334 5.658311 0.123387 0.221777 93.433377 0.382175 0.235965 6.535048 0.525521 0.303537 0.641259 0.289466 0.102065 2.358429 0.251987 0.216561 0.503084 0.435271 4.873453 0.090748 0.033310 0.746537 0.128905 0.127321 0.904011 0.939733 0.435450 0.046646 0.262076 0.043986 0.189008 0.599450 109.901504 1.070052 5.229858 0.052764 0.021407 0.621146 0.081091 0.205164 5.164456 0.747330 0.308078 0.260889 0.185083 0.080708 0.029955 0.084794 1.862626 0.553477 0.151733 0.230320 0.096955 0.352526 0.590018 0.386853 1.559564 0.606648 0.587531 0.592318 0.885230 4.117654 0.246260 6.508329 0.054187 0.195703 1.669092 0.810168 0.066081 2.437439 0.165666 0.106333 0.093417 0.035149 0.072549 1.202023 1.634845 0.060194 0.069359 2.448827 0.232297 0.064822 3.537387 0.435384 0.290413 0.280695 0.105999 0.206603 0.404968 0.048984 0.069963 0.256662 0.228519 0.241077 4.320442 3.656545 0.290216 0.307466 0.096556 0.306067 0.204296 0.504221 1.991533 0.655465 6.799829 11.291065 0.961142 0.448965 6.227274 20.304886 0.205944 1.495537 0.091940 1.994320 0.754940 0.170343 0.050315 0.372166 0.206332 0.097050 5.381403 0.122332 3.256485 2.261319 0.848067 0.064441 0.102493 0.459041 0.133091 0.561215 0.457430 0.163849 5.260446 0.360946 0.389413 0.033291 0.115301 0.112593 1.559944 0.426508 0.132547 0.498634 0.559069 0.264728 0.693307 0.438856 0.306683 0.109129 18.392863 66.647302 0.400021 4.586081 2.099355 0.411347 0.476350 0.584622 3.634276 0.101797 0.148995 0.089177 0.034710 0.063603 0.755865 20.561407 0.133790 0.154902 M 1: 0.066142 0.590377 0.069930 9.850951 1.101363 0.150375 0.568586 0.051668 0.127170 0.292429 0.071458 1.218562 0.075144 7.169085 30.139501 13.461692 0.021372 0.045779 4.270235 0.468325 0.013688 0.302287 1.353957 0.028386 0.037750 0.262130 0.016923 0.064289 0.855973 0.079621 0.011169 0.161937 0.276530 0.161053 0.081472 0.036742 0.030342 2.851667 3.932151 8.159169 0.219934 0.421974 2.468752 0.344765 0.210724 1.172204 0.763553 0.082464 0.726566 11.149790 4.782635 0.058046 0.498072 0.258487 0.146882 0.249672 0.560142 0.046719 0.106259 0.003656 0.004200 0.014189 0.009876 0.002656 0.040244 0.267322 0.053740 0.006597 0.027639 0.012745 0.582670 0.005035 0.275844 0.098208 0.445038 1.217010 0.033969 1.988516 0.681161 0.825960 18.762977 11.949233 0.286794 0.534219 4.336817 3.054085 0.129551 4.210126 0.165753 1.088704 1.889645 3.344809 0.111063 2.067758 3.547017 2.466507 0.188236 0.203493 0.281953 0.037250 0.029788 0.008541 0.014768 0.125869 0.056702 0.004186 0.110993 0.201148 0.139705 0.009201 0.012095 0.043812 0.013513 0.002533 0.005848 0.031390 0.021612 0.004854 0.129497 0.976631 0.053397 0.019475 0.004964 0.015539 0.031779 0.064558 0.065585 0.079927 0.095591 0.196886 0.408834 0.126088 0.037226 0.452302 0.016212 7.278994 0.029917 7.918203 0.450964 0.169797 0.104288 1.578530 0.015909 0.094365 16.179952 0.042762 14.799537 1.506485 0.637893 0.123793 0.641351 0.154810 0.140750 3.416059 0.259400 0.009457 0.090576 0.292108 0.297913 0.017172 0.021976 0.032578 1.375871 0.457399 0.598048 4.418398 0.239749 0.168432 2.950318 0.143327 0.328689 0.125011 0.562720 1.414883 0.227807 3.478333 2.984862 0.061299 0.077470 1.050562 13.974326 0.154326 0.224675 0.112000 0.060703 0.123480 5.294490 0.447011 0.033381 0.045528 M 2: 0.733336 0.558955 0.503360 4.149599 1.415369 1.367574 1.263002 0.994098 0.517204 0.775054 0.763094 1.890137 0.540460 0.200122 4.972745 1.825593 0.450842 0.526135 3.839269 0.597671 0.058964 2.863355 2.872594 0.258365 0.366868 2.578946 0.358350 0.672023 5.349861 0.691594 0.063347 0.032875 0.821562 0.580847 0.661866 0.265730 0.395134 5.581680 1.279881 1.335650 0.397108 1.840061 5.739035 0.284730 0.109781 1.612642 0.466979 0.141582 0.019509 4.670980 1.967383 0.088064 0.581928 0.145401 0.225860 0.434096 2.292917 1.024707 0.821921 0.027824 0.021443 0.088850 0.060820 0.018288 0.042687 1.199607 0.420710 0.037642 0.141233 0.090101 1.043232 0.209978 0.823594 3.039380 1.463390 1.983693 0.397640 2.831098 4.102068 0.059723 5.901348 2.034980 2.600668 5.413080 4.193725 4.534772 0.377181 4.877840 0.370939 1.298542 3.509873 2.646440 0.087872 0.072299 1.139018 0.864479 0.390688 0.322761 0.625409 0.496780 0.532488 0.232460 0.169219 0.755219 0.379926 0.020447 0.023282 0.503875 0.577513 0.109318 0.153776 0.696533 0.398817 0.008940 0.043707 0.436013 0.087640 0.064863 0.036426 1.673207 0.124068 0.218118 0.039217 0.104335 0.349195 0.838324 0.888693 0.488389 1.385133 0.050226 0.962470 0.502294 1.065585 8.351808 0.377304 5.102837 0.561690 7.010411 3.054968 0.039318 0.204155 2.653232 0.564368 0.854294 15.559906 0.401070 8.929538 5.525874 0.067505 0.273372 0.437116 1.927515 0.940458 2.508169 1.357738 0.043394 0.023126 0.567639 1.048288 0.120994 0.180650 0.449074 3.135353 0.012695 0.570771 2.319555 1.856122 0.975427 3.404087 0.015631 0.458799 0.151684 4.154750 11.429924 1.457957 0.233109 0.077004 0.011074 0.026268 0.052132 8.113282 0.377578 0.429221 0.260296 0.222293 0.273138 2.903836 4.731579 0.564762 0.681215 M 3: 0.658412 0.566269 0.854111 0.884454 1.309554 1.272639 1.874713 0.552007 0.227683 0.581512 0.695190 0.967985 0.344015 0.978992 3.427163 2.333253 0.154701 0.221089 2.088785 0.540749 0.058015 5.851132 2.294145 0.182966 0.684164 3.192521 0.528161 1.128882 3.010922 1.012866 0.227296 0.156635 0.878405 0.802754 0.830884 0.431617 0.456530 3.060574 1.279257 1.438430 0.431464 2.075952 4.840271 0.644656 0.266076 2.084975 0.720060 0.291854 0.028961 4.071574 2.258357 0.073037 1.238426 0.199728 0.160296 0.482619 2.992763 1.296206 0.841829 0.031467 0.048542 0.132774 0.133055 0.056045 0.209188 0.925172 0.360522 0.094591 0.313945 0.118104 0.992259 0.086318 2.149634 5.103188 3.775817 3.954021 0.190734 1.776095 4.495841 0.264277 7.063879 2.221150 3.017954 8.558815 4.310199 2.130054 0.571406 4.137385 0.437589 2.071689 2.498630 1.763546 0.116381 0.296578 1.033710 1.283423 0.312579 0.305772 0.681277 0.507160 0.351381 0.189152 0.217780 0.767361 0.278392 0.092075 0.177263 0.451893 0.653836 0.074620 0.181992 0.752277 0.679853 0.025780 0.082005 0.326441 0.343977 0.195877 0.217424 3.057583 0.377558 0.401252 0.072258 0.241015 0.665865 1.266791 0.680174 0.717301 4.001286 0.362942 1.189259 0.964545 1.350568 12.869737 0.531100 8.904999 0.652629 10.091413 2.671718 0.086367 0.359932 4.797423 0.336801 1.021885 23.029406 0.440178 14.013035 5.069337 0.539010 0.742569 0.780580 1.331875 1.531589 4.414850 1.082703 0.091278 0.172734 0.693405 1.422571 0.068958 0.163829 0.481711 4.643214 0.121821 0.584083 4.216178 1.677263 1.575754 5.046403 0.161015 1.531223 0.599244 5.832025 33.873091 1.914768 1.287474 0.444362 0.076328 0.079916 0.466823 5.231362 0.548763 0.831890 0.382271 0.208791 0.307846 3.717971 5.910440 0.282540 0.964421 Marginal ancestral probabilities saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/4_raxmlng_ancestral/O75190.raxml.ancestralProbs Reconstructed ancestral sequences saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/4_raxmlng_ancestral/O75190.raxml.ancestralStates Node-labeled tree saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/4_raxmlng_ancestral/O75190.raxml.ancestralTree Execution log saved to: /truba/home/emrah/WORKFOLDER/PROD/300621_run/phylogeny-snakemake/results/O75190/4_raxmlng_ancestral/O75190.raxml.log Analysis started: 12-Jul-2021 17:31:19 / finished: 12-Jul-2021 17:31:48 Elapsed time: 29.665 seconds Consumed energy: 2.354 Wh